RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 Pfam PF01578 Cytochrome C assembly protein 89 295 4.2E-50 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 8.9E-88 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PANTHER PTHR30009:SF0 1 421 3.5E-279 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PANTHER PTHR30009:SF0 471 659 3.5E-279 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 398 417 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 6.0E-49 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PANTHER PTHR30009 1 421 3.5E-279 T 22-04-2016 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 PANTHER PTHR30009 471 659 3.5E-279 T 22-04-2016 RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 639 1.2E-120 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal RPIC_RS14045 9ffe4cb3db41d831810060190d100b11 672 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.2E-223 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 Pfam PF01844 HNH endonuclease 510 555 1.5E-6 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 SUPERFAMILY SSF56672 79 414 1.56E-50 T 22-04-2016 RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 PANTHER PTHR19446 99 364 1.3E-71 T 22-04-2016 RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 Pfam PF13655 N-terminal domain of reverse transcriptase 19 100 5.3E-31 T 22-04-2016 IPR025960 Reverse transcriptase, N-terminal domain RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 SMART SM00507 497 551 1.5E-4 T 22-04-2016 IPR003615 HNH nuclease RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 PANTHER PTHR19446:SF383 99 364 1.3E-71 T 22-04-2016 RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 63 413 1.6E-112 T 22-04-2016 IPR030931 Group II intron reverse transcriptase/maturase RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 Pfam PF08388 Group II intron, maturase-specific domain 349 426 1.6E-24 T 22-04-2016 IPR013597 Group II intron, maturase-specific RPIC_RS15545 e77f6266711899ae0e14feb77292e4ea 565 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 115 332 4.2E-41 T 22-04-2016 IPR000477 Reverse transcriptase domain RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 38.023 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 339 9.8E-105 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 PANTHER PTHR23264 1 355 3.4E-164 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 SUPERFAMILY SSF117916 3 84 1.44E-17 T 22-04-2016 RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 Pfam PF01883 Domain of unknown function DUF59 6 78 1.5E-21 T 22-04-2016 IPR002744 Domain of unknown function DUF59 RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 Gene3D G3DSA:3.40.50.300 94 339 1.1E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 PANTHER PTHR23264:SF19 1 355 3.4E-164 T 22-04-2016 RPIC_RS12765 d6a4b7295e0ea001f9268c9471dbcf83 362 SUPERFAMILY SSF52540 88 324 1.28E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04475 5b2ae776fc38163f69945dd117df35e6 243 PANTHER PTHR21091 63 185 2.5E-22 T 22-04-2016 RPIC_RS04475 5b2ae776fc38163f69945dd117df35e6 243 Gene3D G3DSA:3.30.950.10 128 241 3.3E-25 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RPIC_RS04475 5b2ae776fc38163f69945dd117df35e6 243 SUPERFAMILY SSF53790 3 238 2.22E-59 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC_RS04475 5b2ae776fc38163f69945dd117df35e6 243 PANTHER PTHR21091:SF118 63 185 2.5E-22 T 22-04-2016 RPIC_RS04475 5b2ae776fc38163f69945dd117df35e6 243 PIRSF PIRSF005917 1 240 6.6E-50 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 Pfam PF02142 MGS-like domain 29 122 5.6E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 15 135 5.6E-53 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 16 135 32.623 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 SMART SM00851 29 122 1.1E-24 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 SUPERFAMILY SSF52335 13 138 1.13E-51 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 PIRSF PIRSF006614 12 146 1.2E-57 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 ProSitePatterns PS01335 Methylglyoxal synthase active site. 69 77 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 PANTHER PTHR30492 6 144 1.7E-61 T 22-04-2016 RPIC_RS11735 c486798ec5e10d57c29e43715844b5aa 146 Gene3D G3DSA:3.40.50.1380 14 143 7.1E-59 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 PIRSF PIRSF002808 1 427 6.0E-40 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 PANTHER PTHR11662 4 418 1.3E-191 T 22-04-2016 RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 Gene3D G3DSA:1.20.1250.20 7 199 1.1E-47 T 22-04-2016 RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 Gene3D G3DSA:1.20.1250.20 216 418 3.0E-26 T 22-04-2016 RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 SUPERFAMILY SSF103473 4 415 2.62E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 PANTHER PTHR11662:SF285 4 418 1.3E-191 T 22-04-2016 RPIC_RS04675 63035052d84557fdb06ef023da905b52 430 Pfam PF07690 Major Facilitator Superfamily 15 373 3.3E-56 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 SUPERFAMILY SSF56645 1 121 4.71E-49 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 2 97 2.2E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 Gene3D G3DSA:1.20.140.10 99 167 5.0E-23 T 22-04-2016 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 PANTHER PTHR10909:SF325 1 167 3.1E-104 T 22-04-2016 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 109 167 8.1E-13 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 PANTHER PTHR10909 1 167 3.1E-104 T 22-04-2016 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 Gene3D G3DSA:2.40.110.10 1 98 6.6E-42 T 22-04-2016 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 SUPERFAMILY SSF47203 107 167 2.42E-14 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS19205 d5cd28a00fc5ddc365632127bcdeabcf 167 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 4 16 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 45 496 2.7E-217 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 Gene3D G3DSA:3.40.605.10 25 286 2.0E-101 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 Pfam PF00171 Aldehyde dehydrogenase family 34 496 1.2E-170 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 PANTHER PTHR11699:SF49 6 500 5.2E-293 T 22-04-2016 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 Gene3D G3DSA:3.40.309.10 287 473 5.3E-71 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 PANTHER PTHR11699 6 500 5.2E-293 T 22-04-2016 RPIC_RS03205 47e3c1e56d4199982f4221e6351d08c7 503 SUPERFAMILY SSF53720 17 500 4.32E-174 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 Gene3D G3DSA:1.10.10.10 135 236 6.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 SMART SM00448 6 117 6.9E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 SMART SM00862 158 234 1.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 SUPERFAMILY SSF52172 4 125 7.97E-43 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 Gene3D G3DSA:3.40.50.2300 2 125 6.8E-42 T 22-04-2016 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 SUPERFAMILY SSF46894 135 236 4.25E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 PANTHER PTHR26402 6 239 3.9E-107 T 22-04-2016 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 PANTHER PTHR26402:SF292 6 239 3.9E-107 T 22-04-2016 RPIC_RS09310 e90d588dcc4b969c877c78837db48282 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 234 5.7E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.30.365.10 469 638 3.0E-52 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.90.1170.50 6 134 8.7E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 724 9.2E-181 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 26 146 6.5E-29 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.30.365.10 135 191 1.3E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.30.365.10 300 376 1.3E-50 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.30.365.10 192 298 4.9E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 PANTHER PTHR11908 607 792 0.0 T 22-04-2016 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 PANTHER PTHR11908 12 590 0.0 T 22-04-2016 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 PANTHER PTHR11908:SF85 607 792 0.0 T 22-04-2016 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 PANTHER PTHR11908:SF85 12 590 0.0 T 22-04-2016 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 SUPERFAMILY SSF56003 138 788 2.49E-207 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 SUPERFAMILY SSF54665 7 166 1.44E-45 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 SMART SM01008 26 146 1.8E-52 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.30.365.10 379 468 7.5E-71 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS06720 bffe207a196abc715a7d738a06236356 792 Gene3D G3DSA:3.30.365.10 639 788 7.5E-71 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS17185 289b57376b1f9f09dc0fc364dc9b35c1 116 SUPERFAMILY SSF52833 2 115 1.03E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17185 289b57376b1f9f09dc0fc364dc9b35c1 116 PANTHER PTHR30041 1 109 5.0E-33 T 22-04-2016 RPIC_RS17185 289b57376b1f9f09dc0fc364dc9b35c1 116 Gene3D G3DSA:3.40.30.10 1 115 8.5E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17185 289b57376b1f9f09dc0fc364dc9b35c1 116 Pfam PF03960 ArsC family 4 113 2.2E-15 T 22-04-2016 IPR006660 Arsenate reductase-like RPIC_RS17185 289b57376b1f9f09dc0fc364dc9b35c1 116 PANTHER PTHR30041:SF4 1 109 5.0E-33 T 22-04-2016 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 PANTHER PTHR11228:SF6 1 172 5.0E-26 T 22-04-2016 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 PANTHER PTHR11228 1 172 5.0E-26 T 22-04-2016 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 PIRSF PIRSF000370 1 212 2.1E-37 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 212 1.7E-107 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 Pfam PF13394 4Fe-4S single cluster domain 25 124 9.3E-6 T 22-04-2016 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 212 34.007 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 SUPERFAMILY SSF102114 46 136 1.55E-6 T 22-04-2016 RPIC_RS06600 6335a31b6c7ceb69afedb8be193f9e61 212 Gene3D G3DSA:3.80.30.10 89 127 1.4E-7 T 22-04-2016 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 SUPERFAMILY SSF52943 2 291 5.1E-94 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 291 5.9E-104 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:1.10.287.80 206 239 6.0E-41 T 22-04-2016 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:1.10.287.80 19 60 6.0E-41 T 22-04-2016 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:1.10.287.80 240 286 9.9E-29 T 22-04-2016 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.6E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 291 35.904 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 PANTHER PTHR11693 1 291 4.2E-118 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 Gene3D G3DSA:3.40.1380.10 63 191 3.1E-41 T 22-04-2016 RPIC_RS17410 a871fe4d7b968556dc352c24dd6d9820 291 Pfam PF00231 ATP synthase 4 290 1.6E-89 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 2.7E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115:SF66 547 719 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115:SF66 310 528 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SUPERFAMILY SSF54980 411 488 3.02E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 719 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SUPERFAMILY SSF50447 271 409 1.83E-35 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Pfam PF00679 Elongation factor G C-terminus 627 714 3.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.0E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.0E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.0E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.0E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.0E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Pfam PF14492 Elongation Factor G, domain II 411 484 5.9E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SMART SM00889 487 625 2.4E-66 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Gene3D G3DSA:2.40.30.10 312 412 1.3E-38 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115 547 719 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SUPERFAMILY SSF52540 6 288 1.68E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Pfam PF03764 Elongation factor G, domain IV 486 624 5.5E-42 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Hamap MF_00054_B Elongation factor G [fusA]. 6 719 109.865 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Gene3D G3DSA:3.30.230.10 491 625 1.3E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.9E-64 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Gene3D G3DSA:3.30.70.240 626 713 2.6E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 PANTHER PTHR23115 310 528 0.0 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SUPERFAMILY SSF54980 630 717 1.15E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Gene3D G3DSA:3.30.70.870 413 487 4.3E-39 T 22-04-2016 RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Gene3D G3DSA:3.40.50.300 6 293 5.5E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SMART SM00838 627 715 1.4E-54 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 SUPERFAMILY SSF54211 486 626 9.36E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS16295 87f424fffc5143cac0eee6469a93d9c0 723 Pfam PF03144 Elongation factor Tu domain 2 331 398 2.4E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Pfam PF12833 Helix-turn-helix domain 106 185 5.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SMART SM01009 196 311 3.1E-50 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SUPERFAMILY SSF46689 85 133 2.55E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 PANTHER PTHR10242:SF3 56 239 3.8E-73 T 22-04-2016 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 PANTHER PTHR10242:SF3 264 484 3.8E-73 T 22-04-2016 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SMART SM00342 100 183 7.6E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 137 179 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Pfam PF02805 Metal binding domain of Ada 7 71 2.4E-29 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Gene3D G3DSA:3.30.310.20 196 311 9.3E-37 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Pfam PF06029 AlkA N-terminal domain 196 311 2.5E-34 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SUPERFAMILY SSF57884 2 76 3.66E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Gene3D G3DSA:1.10.340.30 312 432 2.4E-29 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Gene3D G3DSA:1.10.10.60 138 185 1.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SMART SM00478 321 483 4.4E-8 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 PANTHER PTHR10242 56 239 3.8E-73 T 22-04-2016 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 PANTHER PTHR10242 264 484 3.8E-73 T 22-04-2016 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Gene3D G3DSA:1.10.1670.10 433 483 4.2E-17 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Gene3D G3DSA:1.10.10.60 86 137 1.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 Gene3D G3DSA:3.40.10.10 2 76 2.5E-34 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SUPERFAMILY SSF46689 137 186 1.52E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SUPERFAMILY SSF48150 301 481 4.71E-39 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS13660 2f768fff601b4610ad049cf4dafe1d43 491 SUPERFAMILY SSF55945 196 296 8.79E-28 T 22-04-2016 RPIC_RS13760 fb9d325736fc47356e06f94d530882b8 193 Pfam PF05962 HutD 8 172 1.0E-47 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves RPIC_RS13760 fb9d325736fc47356e06f94d530882b8 193 Gene3D G3DSA:2.60.120.10 9 114 1.4E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS13760 fb9d325736fc47356e06f94d530882b8 193 PANTHER PTHR37943 1 116 7.0E-36 T 22-04-2016 RPIC_RS13760 fb9d325736fc47356e06f94d530882b8 193 SUPERFAMILY SSF51182 1 171 2.49E-45 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS13760 fb9d325736fc47356e06f94d530882b8 193 PANTHER PTHR37943:SF1 1 116 7.0E-36 T 22-04-2016 RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 Pfam PF04055 Radical SAM superfamily 40 170 8.7E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 PANTHER PTHR30352:SF4 22 180 1.9E-24 T 22-04-2016 RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 22 207 8.0E-56 T 22-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 Pfam PF13353 4Fe-4S single cluster domain 35 121 3.7E-9 T 22-04-2016 RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 SUPERFAMILY SSF102114 38 224 1.2E-28 T 22-04-2016 RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 PANTHER PTHR30352 22 180 1.9E-24 T 22-04-2016 RPIC_RS10370 8ffb7a89a93f33b2e850c4cc36860231 237 Gene3D G3DSA:3.20.20.70 39 216 1.0E-25 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 Pfam PF02308 MgtC family 19 139 1.9E-32 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 PRINTS PR01837 MgtC/SapB protein signature 94 118 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 PRINTS PR01837 MgtC/SapB protein signature 67 89 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.6E-39 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 PANTHER PTHR33778 1 233 2.1E-73 T 22-04-2016 RPIC_RS06685 29af1cadc16a8c7321e7c63abb2ffbb7 238 PANTHER PTHR33778:SF3 1 233 2.1E-73 T 22-04-2016 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 PANTHER PTHR24423 175 455 4.7E-93 T 22-04-2016 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 SMART SM00388 235 301 9.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 5.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 5.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 5.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 5.8E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 300 1.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 453 2.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 453 7.9E-133 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 SUPERFAMILY SSF55874 290 454 4.85E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 PANTHER PTHR24423:SF354 175 455 4.7E-93 T 22-04-2016 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 SUPERFAMILY SSF47384 219 300 8.83E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 Gene3D G3DSA:3.30.565.10 308 454 3.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 SMART SM00387 344 456 1.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 Gene3D G3DSA:1.10.287.130 225 297 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 SMART SM00304 181 234 2.3E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS09030 d425dd8b5948cccd4c815468d1c0acc0 456 Pfam PF00672 HAMP domain 163 230 1.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS03375 f43b782823a1181c19f46067947da363 329 PANTHER PTHR10584 7 313 5.1E-107 T 22-04-2016 RPIC_RS03375 f43b782823a1181c19f46067947da363 329 PANTHER PTHR10584:SF186 7 313 5.1E-107 T 22-04-2016 RPIC_RS03375 f43b782823a1181c19f46067947da363 329 Pfam PF00294 pfkB family carbohydrate kinase 6 306 1.1E-55 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC_RS03375 f43b782823a1181c19f46067947da363 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC_RS03375 f43b782823a1181c19f46067947da363 329 Gene3D G3DSA:3.40.1190.20 2 313 2.4E-85 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS03375 f43b782823a1181c19f46067947da363 329 SUPERFAMILY SSF53613 4 310 2.65E-78 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 309 3.3E-128 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 PANTHER PTHR10584 6 308 4.5E-117 T 22-04-2016 RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 Gene3D G3DSA:3.40.1190.20 13 308 2.9E-64 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 PANTHER PTHR10584:SF159 6 308 4.5E-117 T 22-04-2016 RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 Pfam PF00294 pfkB family carbohydrate kinase 13 301 1.4E-43 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 52 75 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC_RS03840 60ed3e492e24ff5fb4cc15ecaf5347a9 310 SUPERFAMILY SSF53613 13 308 9.35E-59 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS03580 94f6ab28376a1f6a5edbba5ada7f1b03 117 Gene3D G3DSA:3.10.50.40 3 117 1.4E-48 T 22-04-2016 RPIC_RS03580 94f6ab28376a1f6a5edbba5ada7f1b03 117 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 115 7.4E-34 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC_RS03580 94f6ab28376a1f6a5edbba5ada7f1b03 117 PANTHER PTHR10516 5 117 9.3E-58 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC_RS03580 94f6ab28376a1f6a5edbba5ada7f1b03 117 SUPERFAMILY SSF54534 5 117 1.96E-44 T 22-04-2016 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Gene3D G3DSA:3.30.300.20 362 438 1.7E-24 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.8E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Pfam PF01926 50S ribosome-binding GTPase 182 300 9.2E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 PANTHER PTHR11649 1 439 3.7E-138 T 22-04-2016 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Hamap MF_00195 GTPase Der [der]. 2 439 37.439 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 3.36E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.36E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Gene3D G3DSA:3.40.50.300 180 361 2.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Gene3D G3DSA:3.40.50.300 3 170 3.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.4E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 181 346 5.8E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 436 1.5E-24 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 PANTHER PTHR11649:SF5 1 439 3.7E-138 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 SUPERFAMILY SSF52540 4 164 1.07E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 436 2.3E-167 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 SUPERFAMILY SSF52540 138 442 1.76E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 PIRSF PIRSF006485 1 444 3.3E-166 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 SMART SM00382 179 322 0.0013 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05280 17563826be4ef2ef912bd53f36fcd764 447 SMART SM00382 1 140 2.6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS24940 d700cc7607a1c445e60ed92818b19f4a 74 SUPERFAMILY SSF53850 2 71 2.71E-12 T 22-04-2016 RPIC_RS24940 d700cc7607a1c445e60ed92818b19f4a 74 Pfam PF03466 LysR substrate binding domain 2 69 6.4E-11 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS24940 d700cc7607a1c445e60ed92818b19f4a 74 Gene3D G3DSA:3.40.190.10 3 37 8.7E-8 T 22-04-2016 RPIC_RS24940 d700cc7607a1c445e60ed92818b19f4a 74 PANTHER PTHR30537:SF5 2 74 6.7E-15 T 22-04-2016 RPIC_RS24940 d700cc7607a1c445e60ed92818b19f4a 74 PANTHER PTHR30537 2 74 6.7E-15 T 22-04-2016 RPIC_RS04090 656d59bb825a60c1b67088bc980789eb 176 PANTHER PTHR33567 7 176 1.4E-27 T 22-04-2016 RPIC_RS04090 656d59bb825a60c1b67088bc980789eb 176 Pfam PF02417 Chromate transporter 9 171 4.0E-30 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:3.30.420.10 333 551 1.6E-78 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SUPERFAMILY SSF88723 5 169 7.85E-56 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:1.20.1060.10 552 671 4.7E-35 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 ProSitePatterns PS00447 DNA polymerase family A signature. 763 782 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 170 254 2.5E-23 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PANTHER PTHR10133 321 936 0.0 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PANTHER PTHR10133 1 283 0.0 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SMART SM00474 335 526 1.9E-34 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SMART SM00482 695 901 5.1E-115 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:3.40.50.1010 7 184 3.1E-69 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Pfam PF01612 3'-5' exonuclease 335 525 2.1E-37 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SUPERFAMILY SSF56672 532 937 3.56E-156 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 169 6.4E-53 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PANTHER PTHR10133:SF27 321 936 0.0 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PANTHER PTHR10133:SF27 1 283 0.0 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:3.30.70.370 827 937 1.8E-65 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:3.30.70.370 672 720 1.8E-65 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:1.10.150.20 721 826 1.8E-36 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 TIGRFAM TIGR00593 pola: DNA polymerase I 8 937 9.7E-277 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SUPERFAMILY SSF53098 338 527 5.57E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Gene3D G3DSA:1.10.150.20 185 244 1.8E-24 T 22-04-2016 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SUPERFAMILY SSF47807 170 286 7.48E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SMART SM00279 172 207 2.8E-12 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 732 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 800 811 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 664 686 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 870 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 687 702 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 752 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 884 897 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 833 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 788 7.3E-76 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 Pfam PF00476 DNA polymerase family A 560 935 2.8E-151 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS12005 158ff0f9ea0b3af4e0b5c72d5daa8e2b 937 SMART SM00475 4 262 2.6E-111 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 SUPERFAMILY SSF53335 254 285 1.01E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 SUPERFAMILY SSF53335 13 224 1.01E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 Pfam PF08241 Methyltransferase domain 52 161 8.0E-19 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 PANTHER PTHR13090:SF3 105 312 4.7E-31 T 22-04-2016 RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 PANTHER PTHR13090:SF3 9 88 4.7E-31 T 22-04-2016 RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 PANTHER PTHR13090 105 312 4.7E-31 T 22-04-2016 RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 PANTHER PTHR13090 9 88 4.7E-31 T 22-04-2016 RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 Gene3D G3DSA:3.40.50.150 23 226 2.1E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01050 b07c63a35510a00b68128beead1c83c2 313 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 7 285 25.726 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 SUPERFAMILY SSF56801 25 554 3.92E-129 T 22-04-2016 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 Gene3D G3DSA:3.40.50.980 27 206 1.6E-28 T 22-04-2016 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 1.7E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 PANTHER PTHR24096:SF53 1 551 5.0E-205 T 22-04-2016 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 Gene3D G3DSA:3.30.300.30 453 551 4.7E-29 T 22-04-2016 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 Pfam PF00501 AMP-binding enzyme 32 458 7.2E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 PANTHER PTHR24096 1 551 5.0E-205 T 22-04-2016 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 Gene3D G3DSA:3.40.50.980 207 358 4.0E-25 T 22-04-2016 RPIC_RS12955 755cbac7cecec94fb14adf1249099901 558 Gene3D G3DSA:2.30.38.10 377 452 1.8E-19 T 22-04-2016 RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 Gene3D G3DSA:3.40.190.10 92 176 4.9E-23 T 22-04-2016 RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 Pfam PF03466 LysR substrate binding domain 90 291 2.5E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 PANTHER PTHR30537 1 301 3.2E-106 T 22-04-2016 RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 SUPERFAMILY SSF53850 91 297 5.07E-45 T 22-04-2016 RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 SUPERFAMILY SSF46785 4 85 6.05E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 Gene3D G3DSA:1.10.10.10 3 83 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 PANTHER PTHR30537:SF5 1 301 3.2E-106 T 22-04-2016 RPIC_RS17225 3590983143aefe65ad7f733dafa62ebb 303 Gene3D G3DSA:3.40.190.10 177 261 1.4E-21 T 22-04-2016 RPIC_RS17450 d3debf1663452c81e8be48ff31c9eca0 261 PANTHER PTHR13696:SF52 1 261 2.8E-86 T 22-04-2016 RPIC_RS17450 d3debf1663452c81e8be48ff31c9eca0 261 Gene3D G3DSA:3.40.50.300 3 257 6.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17450 d3debf1663452c81e8be48ff31c9eca0 261 Pfam PF13614 AAA domain 4 178 7.4E-62 T 22-04-2016 IPR025669 AAA domain RPIC_RS17450 d3debf1663452c81e8be48ff31c9eca0 261 SUPERFAMILY SSF52540 1 255 2.51E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17450 d3debf1663452c81e8be48ff31c9eca0 261 PANTHER PTHR13696 1 261 2.8E-86 T 22-04-2016 RPIC_RS13060 2144bf73740c553367becb43db13b593 331 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 105 312 2.3E-90 T 22-04-2016 IPR014142 P-type conjugative transfer protein TrbG RPIC_RS13060 2144bf73740c553367becb43db13b593 331 Pfam PF03524 Conjugal transfer protein 104 323 4.7E-65 T 22-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 PANTHER PTHR30461 1 183 8.5E-43 T 22-04-2016 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 SMART SM00857 2 140 3.4E-53 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 Pfam PF00239 Resolvase, N terminal domain 3 139 1.9E-42 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 Gene3D G3DSA:3.40.50.1390 1 123 3.6E-39 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 SUPERFAMILY SSF53041 1 140 4.84E-42 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 SUPERFAMILY SSF46689 142 182 9.86E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07310 88b8a4be48420e36fb59910643c21f18 197 Gene3D G3DSA:1.10.10.60 142 179 3.5E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 PANTHER PTHR30461 1 183 8.5E-43 T 22-04-2016 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 SMART SM00857 2 140 3.4E-53 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 Pfam PF00239 Resolvase, N terminal domain 3 139 1.9E-42 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 ProSitePatterns PS00398 Site-specific recombinases signature 2. 59 71 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 Gene3D G3DSA:3.40.50.1390 1 123 3.6E-39 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 SUPERFAMILY SSF53041 1 140 4.84E-42 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 SUPERFAMILY SSF46689 142 182 9.86E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09080 88b8a4be48420e36fb59910643c21f18 197 Gene3D G3DSA:1.10.10.60 142 179 3.5E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 224 9.2E-44 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 Gene3D G3DSA:3.30.950.10 125 258 4.6E-31 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 Gene3D G3DSA:3.40.1010.10 10 124 7.4E-41 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 89 122 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 15 29 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 PANTHER PTHR21091 10 226 6.8E-59 T 22-04-2016 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 10 250 3.7E-88 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 PANTHER PTHR21091:SF16 10 226 6.8E-59 T 22-04-2016 RPIC_RS13220 c0ae7555d8f87cf1528a69a5abdd61f2 269 SUPERFAMILY SSF53790 6 251 2.62E-62 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 19 140 2.4E-26 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 Pfam PF03652 Holliday junction resolvase 17 141 2.6E-33 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 SMART SM00732 16 116 1.9E-26 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 16 143 21.624 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 PANTHER PTHR33317 16 141 2.7E-27 T 22-04-2016 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 SUPERFAMILY SSF53098 16 141 4.25E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS03020 3aed9a60cbc552fd44237114f3fe6afc 143 Gene3D G3DSA:3.30.420.140 16 142 1.5E-37 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC_RS13855 09553c2dd22b472edf701c1c6d47afa3 343 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 15 325 1.0E-99 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RPIC_RS13855 09553c2dd22b472edf701c1c6d47afa3 343 PIRSF PIRSF026166 6 341 2.8E-106 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RPIC_RS13855 09553c2dd22b472edf701c1c6d47afa3 343 PANTHER PTHR18640 14 333 1.2E-91 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 2.8E-64 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 SUPERFAMILY SSF52096 3 261 7.18E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 PANTHER PTHR11941 5 259 7.7E-96 T 22-04-2016 RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 6 262 2.1E-138 T 22-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 Gene3D G3DSA:3.90.226.10 1 259 2.6E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC_RS15380 069141e0f622b13be64f7fc47bbbe120 262 PANTHER PTHR11941:SF76 5 259 7.7E-96 T 22-04-2016 RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 Gene3D G3DSA:3.40.50.300 219 379 2.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 PANTHER PTHR24031 1 467 8.6E-195 T 22-04-2016 RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 SUPERFAMILY SSF52540 24 107 8.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 525 51.551 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 SUPERFAMILY SSF52540 81 366 3.75E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 SMART SM00487 20 228 3.7E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 Gene3D G3DSA:3.40.50.300 1 218 4.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 Pfam PF00271 Helicase conserved C-terminal domain 239 345 3.6E-27 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 PANTHER PTHR24031:SF261 1 467 8.6E-195 T 22-04-2016 RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 Pfam PF00270 DEAD/DEAH box helicase 25 201 2.6E-48 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 SMART SM00490 264 345 3.5E-33 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS02060 0205ed203f0ff2142ff5f8bf1372986a 560 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 159 167 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 PANTHER PTHR10681 3 166 2.4E-48 T 22-04-2016 RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 PANTHER PTHR10681:SF81 3 166 2.4E-48 T 22-04-2016 RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 Gene3D G3DSA:3.40.30.10 2 166 2.8E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 SUPERFAMILY SSF52833 1 162 2.47E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 39.576 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RPIC_RS14945 64195543f7d3e031fd5585145937df60 166 Pfam PF08534 Redoxin 20 162 4.1E-27 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SMART SM00869 1399 1663 5.1E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF03797 Autotransporter beta-domain 1401 1653 2.2E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 465 506 2.7E-8 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 1013 1055 2.7E-10 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 373 414 1.7E-8 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 651 692 3.1E-11 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 557 599 8.6E-9 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 739 780 3.0E-10 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 837 875 6.3E-7 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF05345 Putative Ig domain 926 966 6.2E-8 T 22-04-2016 IPR008009 Putative Ig RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 436 523 4.87E-7 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 625 706 7.69E-10 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.40.128.130 1392 1671 1.0E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 910 980 3.45E-7 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 PANTHER PTHR37494 143 1327 6.4E-86 T 22-04-2016 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SMART SM00736 983 1078 0.12 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SMART SM00736 435 528 0.19 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SMART SM00736 622 711 0.099 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SMART SM00736 716 802 0.081 T 22-04-2016 IPR006644 Dystroglycan-type cadherin-like GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF81296 170 255 5.09E-15 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 984 1073 2.27E-11 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF103515 1395 1670 2.35E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SMART SM00429 170 254 1.3E-9 T 22-04-2016 IPR002909 IPT domain GO:0005515 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 723 781 6.98E-8 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 352 431 9.07E-9 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 545 615 5.6E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 983 1073 1.1E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 921 979 8.0E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 648 706 4.3E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 436 522 9.6E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 355 431 2.5E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 738 794 2.1E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 825 892 3.2E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 807 893 2.69E-9 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 SUPERFAMILY SSF49313 535 615 1.15E-8 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Gene3D G3DSA:2.60.40.10 170 247 2.0E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS18045 e2bc2c56ef77ee2b63de4a9e826d3d68 1673 Pfam PF01833 IPT/TIG domain 171 253 5.8E-13 T 22-04-2016 IPR002909 IPT domain GO:0005515 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 PANTHER PTHR30602 32 465 2.3E-158 T 22-04-2016 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 PIRSF PIRSF000423 27 465 2.2E-188 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 SUPERFAMILY SSF55729 320 443 5.32E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 Pfam PF00696 Amino acid kinase family 53 291 1.3E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 34 465 205.368 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 SUPERFAMILY SSF53633 33 315 3.14E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 Gene3D G3DSA:3.40.630.30 321 464 6.4E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 Gene3D G3DSA:3.40.1160.10 51 313 3.9E-63 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 Pfam PF00583 Acetyltransferase (GNAT) family 364 436 4.7E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS05360 ac61a0b26055841312915f3e0847a489 465 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 36 465 1.7E-213 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC_RS13345 9bd5806137c2fed72812f99689e7f2d5 401 PANTHER PTHR30483:SF20 29 390 7.9E-89 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS13345 9bd5806137c2fed72812f99689e7f2d5 401 Pfam PF13458 Periplasmic binding protein 51 391 1.3E-62 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS13345 9bd5806137c2fed72812f99689e7f2d5 401 SUPERFAMILY SSF53822 51 394 3.46E-98 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS13345 9bd5806137c2fed72812f99689e7f2d5 401 Gene3D G3DSA:3.40.50.2300 51 251 4.2E-68 T 22-04-2016 RPIC_RS13345 9bd5806137c2fed72812f99689e7f2d5 401 PANTHER PTHR30483 29 390 7.9E-89 T 22-04-2016 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 13 455 6.0E-125 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 PANTHER PTHR11444 5 456 3.4E-266 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 SUPERFAMILY SSF48557 4 448 8.48E-105 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 Pfam PF00206 Lyase 15 313 8.3E-60 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 PANTHER PTHR11444:SF17 5 456 3.4E-266 T 22-04-2016 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 Gene3D G3DSA:1.10.40.30 391 446 8.3E-30 T 22-04-2016 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 Gene3D G3DSA:1.10.275.10 3 119 2.0E-45 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 3.8E-49 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 8.5E-19 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS14595 1148a42bb2837b6e339ca170919cd0be 457 Gene3D G3DSA:1.20.200.10 120 390 3.5E-88 T 22-04-2016 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 46.947 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 PANTHER PTHR30194 1 169 3.1E-64 T 22-04-2016 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 SUPERFAMILY SSF53098 1 155 6.32E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.3E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 Gene3D G3DSA:3.30.420.10 1 155 9.4E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 153 7.7E-53 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS01860 7b0f092f2da44fa532a3c3444e74750e 181 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 2.0E-51 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SUPERFAMILY SSF47384 571 643 6.08E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Gene3D G3DSA:1.10.287.130 574 632 2.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SUPERFAMILY SSF158472 376 423 9.29E-9 T 22-04-2016 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Pfam PF00672 HAMP domain 356 422 8.2E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 PRINTS PR00344 Bacterial sensor protein C-terminal signature 761 771 1.0E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 PRINTS PR00344 Bacterial sensor protein C-terminal signature 743 757 1.0E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 PRINTS PR00344 Bacterial sensor protein C-terminal signature 772 790 1.0E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SMART SM00388 574 646 1.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Gene3D G3DSA:3.30.565.10 633 802 7.6E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SUPERFAMILY SSF55785 430 564 7.8E-10 T 22-04-2016 IPR000014 PAS domain RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SUPERFAMILY SSF55874 635 799 2.88E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SMART SM00304 374 426 7.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 SMART SM00387 690 823 4.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Gene3D G3DSA:3.30.450.20 430 565 5.7E-13 T 22-04-2016 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 690 804 2.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 PANTHER PTHR24423 438 797 4.7E-48 T 22-04-2016 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 PANTHER PTHR24423 272 291 4.7E-48 T 22-04-2016 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 PANTHER PTHR24423 17 27 4.7E-48 T 22-04-2016 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Pfam PF00512 His Kinase A (phospho-acceptor) domain 575 642 5.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS18215 fc7bd627e1353e4b11bd41b37a4f4400 823 Pfam PF08448 PAS fold 446 565 1.2E-5 T 22-04-2016 IPR013656 PAS fold-4 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 Gene3D G3DSA:3.60.120.10 12 503 5.6E-176 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 Pfam PF00425 chorismate binding enzyme 221 491 1.8E-92 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PANTHER PTHR11236 5 297 1.4E-219 T 22-04-2016 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PANTHER PTHR11236 315 504 1.4E-219 T 22-04-2016 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 1.8E-36 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 499 2.2E-163 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PANTHER PTHR11236:SF9 5 297 1.4E-219 T 22-04-2016 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PANTHER PTHR11236:SF9 315 504 1.4E-219 T 22-04-2016 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PRINTS PR00095 Anthranilate synthase component I signature 433 447 5.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PRINTS PR00095 Anthranilate synthase component I signature 353 366 5.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PRINTS PR00095 Anthranilate synthase component I signature 339 352 5.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 PRINTS PR00095 Anthranilate synthase component I signature 448 462 5.7E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15420 de4d36d502a4d35ae40fffc40f2788e2 510 SUPERFAMILY SSF56322 14 499 2.22E-155 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 PANTHER PTHR10314 379 479 1.2E-118 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 PANTHER PTHR10314 53 346 1.2E-118 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 PANTHER PTHR10314 25 36 1.2E-118 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 TIGRFAM TIGR00260 thrC: threonine synthase 108 440 4.1E-67 T 22-04-2016 IPR004450 Threonine synthase-like RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 Pfam PF14821 Threonine synthase N terminus 2 79 1.3E-29 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 Gene3D G3DSA:3.40.50.1100 216 451 1.4E-86 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 Gene3D G3DSA:3.40.50.1100 123 215 1.1E-6 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 Gene3D G3DSA:3.90.1380.10 1 82 7.9E-32 T 22-04-2016 IPR029144 Threonine synthase, N-terminal RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 343 2.3E-12 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 SUPERFAMILY SSF53686 1 479 4.16E-149 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 PANTHER PTHR10314:SF1 379 479 1.2E-118 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 PANTHER PTHR10314:SF1 53 346 1.2E-118 T 22-04-2016 RPIC_RS05975 d88b557cf7c90a400995404d079d5fb6 481 PANTHER PTHR10314:SF1 25 36 1.2E-118 T 22-04-2016 RPIC_RS15495 7deb52f71ae44546c7123881b198951e 125 Gene3D G3DSA:1.20.58.380 21 105 6.4E-33 T 22-04-2016 RPIC_RS15495 7deb52f71ae44546c7123881b198951e 125 Pfam PF05400 Flagellar protein FliT 35 119 1.7E-21 T 22-04-2016 IPR008622 Flagellar protein FliT RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 SMART SM00855 2 113 1.5E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 PANTHER PTHR23029 1 75 3.2E-12 T 22-04-2016 RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 PANTHER PTHR23029:SF49 1 75 3.2E-12 T 22-04-2016 RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 Gene3D G3DSA:3.40.50.1240 1 155 4.0E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 SUPERFAMILY SSF53254 2 135 4.19E-21 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 133 3.8E-23 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- RPIC_RS09925 ff93f0b520f098c831d0a94ce051512e 157 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 75 5.4E-12 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 SUPERFAMILY SSF81624 2 138 2.49E-33 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 291 41.442 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 SMART SM01232 151 243 5.3E-42 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 SMART SM00898 2 133 4.5E-44 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 SUPERFAMILY SSF46946 152 243 6.77E-26 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 151 240 6.4E-19 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 SUPERFAMILY SSF57716 239 290 9.27E-17 T 22-04-2016 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 Gene3D G3DSA:1.10.8.50 152 291 3.3E-47 T 22-04-2016 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 PANTHER PTHR22993:SF15 1 291 1.5E-107 T 22-04-2016 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 290 6.2E-74 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 132 1.9E-28 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 Gene3D G3DSA:3.20.190.10 2 151 1.3E-32 T 22-04-2016 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 PANTHER PTHR22993 1 291 1.5E-107 T 22-04-2016 RPIC_RS01240 9540d7ce90830adb3690eb91befaa5c6 291 Pfam PF06827 Zinc finger found in FPG and IleRS 263 290 7.6E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PANTHER PTHR30070 3 222 1.1E-53 T 22-04-2016 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 1.9E-67 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PIRSF PIRSF002764 1 222 1.4E-76 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PANTHER PTHR30070:SF1 3 222 1.1E-53 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 Pfam PF03379 CcmB protein 6 219 8.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 134 157 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14030 3b9355fb611f19308241c15d32ffcbfa 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.6E-59 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 SUPERFAMILY SSF53633 4 250 9.95E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 2.9E-124 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 Pfam PF00696 Amino acid kinase family 3 229 1.7E-49 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 PANTHER PTHR21499:SF27 1 415 2.1E-160 T 22-04-2016 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 Pfam PF01842 ACT domain 276 332 8.7E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 Pfam PF13840 ACT domain 348 409 1.6E-17 T 22-04-2016 IPR027795 GATS-like ACT domain RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 Gene3D G3DSA:3.40.1160.10 1 254 1.2E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 SUPERFAMILY SSF55021 257 336 1.07E-17 T 22-04-2016 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 PANTHER PTHR21499 1 415 2.1E-160 T 22-04-2016 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 SUPERFAMILY SSF55021 341 414 5.5E-25 T 22-04-2016 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 3.2E-112 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS05005 ab6d0e7f3a86c9f5c24a26bca3d4e18a 416 PIRSF PIRSF000726 54 416 8.6E-139 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 Pfam PF13180 PDZ domain 230 294 7.1E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 SUPERFAMILY SSF50156 93 192 1.71E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 458 4.8E-94 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 PANTHER PTHR22939 152 167 6.1E-61 T 22-04-2016 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 PANTHER PTHR22939:SF78 225 459 6.1E-61 T 22-04-2016 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 SUPERFAMILY SSF50156 216 297 1.03E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 Pfam PF02163 Peptidase family M50 6 445 3.5E-73 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 Gene3D G3DSA:2.30.42.10 218 300 3.1E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 SMART SM00228 220 287 1.4E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 PANTHER PTHR22939 225 459 6.1E-61 T 22-04-2016 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 Gene3D G3DSA:2.30.42.10 99 182 2.6E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS06385 c0c6b7087f52db5e51f3f18d3a87e11c 462 PANTHER PTHR22939:SF78 152 167 6.1E-61 T 22-04-2016 RPIC_RS00925 f375cbf87289538608c36760619de489 170 Pfam PF01661 Macro domain 23 135 8.8E-46 T 22-04-2016 IPR002589 Macro domain RPIC_RS00925 f375cbf87289538608c36760619de489 170 Gene3D G3DSA:3.40.220.10 6 167 6.5E-69 T 22-04-2016 RPIC_RS00925 f375cbf87289538608c36760619de489 170 SUPERFAMILY SSF52949 5 167 1.36E-63 T 22-04-2016 RPIC_RS00925 f375cbf87289538608c36760619de489 170 PANTHER PTHR11106 10 166 4.4E-85 T 22-04-2016 RPIC_RS00925 f375cbf87289538608c36760619de489 170 SMART SM00506 6 135 1.7E-50 T 22-04-2016 IPR002589 Macro domain RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 Gene3D G3DSA:3.40.50.720 1 151 1.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 SUPERFAMILY SSF55347 140 305 1.83E-53 T 22-04-2016 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 Gene3D G3DSA:3.30.70.260 356 426 2.3E-10 T 22-04-2016 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 PIRSF PIRSF000098 1 438 5.1E-163 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 PANTHER PTHR21499 4 372 2.9E-133 T 22-04-2016 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 SUPERFAMILY SSF51735 1 161 6.07E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 132 2.4E-23 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 Gene3D G3DSA:3.30.360.10 152 302 6.8E-58 T 22-04-2016 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 PANTHER PTHR21499:SF2 4 372 2.9E-133 T 22-04-2016 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 Pfam PF00742 Homoserine dehydrogenase 140 318 6.5E-65 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 SUPERFAMILY SSF55021 355 426 2.75E-11 T 22-04-2016 RPIC_RS05970 f6ae93501a92ec6fc5c70b2152653f62 439 Pfam PF01842 ACT domain 357 424 2.2E-13 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC_RS00370 e38c39fa4d1779296ba695e8e75779ca 398 PANTHER PTHR23501:SF4 1 376 4.9E-88 T 22-04-2016 RPIC_RS00370 e38c39fa4d1779296ba695e8e75779ca 398 Gene3D G3DSA:1.20.1250.20 4 181 9.5E-29 T 22-04-2016 RPIC_RS00370 e38c39fa4d1779296ba695e8e75779ca 398 PANTHER PTHR23501 1 376 4.9E-88 T 22-04-2016 RPIC_RS00370 e38c39fa4d1779296ba695e8e75779ca 398 Gene3D G3DSA:1.20.1250.20 202 378 9.4E-10 T 22-04-2016 RPIC_RS00370 e38c39fa4d1779296ba695e8e75779ca 398 Pfam PF07690 Major Facilitator Superfamily 8 346 5.1E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS00370 e38c39fa4d1779296ba695e8e75779ca 398 SUPERFAMILY SSF103473 4 383 1.83E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 SUPERFAMILY SSF52540 1 159 3.92E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 PRINTS PR01100 Shikimate kinase family signature 97 114 9.5E-5 T 22-04-2016 RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 PRINTS PR01100 Shikimate kinase family signature 3 18 9.5E-5 T 22-04-2016 RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 Gene3D G3DSA:3.40.50.300 1 160 7.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 158 1.2E-55 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 PANTHER PTHR11603 1 165 1.1E-82 T 22-04-2016 RPIC_RS01550 9c8890689b93a8c61564ef46886734d4 169 Pfam PF01202 Shikimate kinase 9 160 1.1E-21 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 274 288 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 Gene3D G3DSA:3.50.50.60 199 333 2.7E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 Gene3D G3DSA:3.50.50.60 489 554 2.7E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 Gene3D G3DSA:3.50.50.60 10 134 2.7E-117 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 Pfam PF00732 GMC oxidoreductase 12 315 2.2E-81 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 PANTHER PTHR11552 6 573 9.2E-206 T 22-04-2016 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 SUPERFAMILY SSF51905 492 554 2.75E-85 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 SUPERFAMILY SSF51905 10 303 2.75E-85 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 SUPERFAMILY SSF54373 310 496 2.26E-53 T 22-04-2016 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 PIRSF PIRSF000137 5 560 1.2E-152 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 Pfam PF05199 GMC oxidoreductase 407 548 3.6E-41 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC_RS18030 ec45c120207b842d34431ffe77e4825d 576 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 90 113 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 459 477 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 Gene3D G3DSA:3.20.20.60 265 577 3.7E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 567 7.7E-162 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 SUPERFAMILY SSF51621 258 554 1.54E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PANTHER PTHR22931:SF28 70 562 9.4E-154 T 22-04-2016 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 SUPERFAMILY SSF47831 28 146 7.98E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 260 552 8.6E-109 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 3.3E-28 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 474 1.4E-23 T 22-04-2016 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 476 491 1.4E-23 T 22-04-2016 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 302 321 1.4E-23 T 22-04-2016 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 512 524 1.4E-23 T 22-04-2016 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PANTHER PTHR22931 70 562 9.4E-154 T 22-04-2016 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 SUPERFAMILY SSF52009 128 253 3.01E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 193 204 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 Pfam PF00391 PEP-utilising enzyme, mobile domain 162 234 1.7E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 Gene3D G3DSA:3.50.30.10 136 264 1.2E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 PIRSF PIRSF000732 1 583 3.3E-208 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RPIC_RS00990 fce322a730015a4ab4ad1068cbf524a7 583 Gene3D G3DSA:1.10.274.10 27 135 3.4E-34 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 SUPERFAMILY SSF51735 2 182 5.47E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 PANTHER PTHR23309:SF12 388 502 6.9E-214 T 22-04-2016 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 PANTHER PTHR23309:SF12 1 301 6.9E-214 T 22-04-2016 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 Gene3D G3DSA:3.40.50.720 2 185 3.3E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 SUPERFAMILY SSF48179 183 290 3.49E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 PANTHER PTHR23309 388 502 6.9E-214 T 22-04-2016 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 PANTHER PTHR23309 1 301 6.9E-214 T 22-04-2016 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 SUPERFAMILY SSF48179 411 494 7.57E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 Gene3D G3DSA:1.10.1040.10 411 495 7.6E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 Gene3D G3DSA:1.10.1040.10 186 282 5.5E-27 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 181 3.7E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 411 492 8.3E-18 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS10655 3356b0c4fc4595a90ce736d2eec776ee 502 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 281 7.4E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS00135 d79c16872b7d8d960b7337e2d57628bc 204 Gene3D G3DSA:3.40.30.10 1 73 1.0E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00135 d79c16872b7d8d960b7337e2d57628bc 204 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 5.2E-21 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS00135 d79c16872b7d8d960b7337e2d57628bc 204 PANTHER PTHR11260 1 199 1.1E-72 T 22-04-2016 RPIC_RS00135 d79c16872b7d8d960b7337e2d57628bc 204 PANTHER PTHR11260:SF325 1 199 1.1E-72 T 22-04-2016 RPIC_RS00135 d79c16872b7d8d960b7337e2d57628bc 204 SUPERFAMILY SSF47616 75 198 1.68E-5 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS00135 d79c16872b7d8d960b7337e2d57628bc 204 SUPERFAMILY SSF52833 1 86 3.07E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 Gene3D G3DSA:1.20.1250.20 12 205 7.9E-30 T 22-04-2016 RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 Gene3D G3DSA:1.20.1250.20 272 470 1.1E-9 T 22-04-2016 RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 SUPERFAMILY SSF103473 11 201 6.15E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 SUPERFAMILY SSF103473 212 465 3.14E-15 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 PANTHER PTHR23501:SF26 14 436 6.8E-118 T 22-04-2016 RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 Pfam PF07690 Major Facilitator Superfamily 24 427 7.9E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS17840 aca46d5f6471921ec06f7ae0f8f28ce1 488 PANTHER PTHR23501 14 436 6.8E-118 T 22-04-2016 RPIC_RS02000 f9587fa0ac703ad89d4f443fd883d77d 330 Pfam PF02562 PhoH-like protein 119 321 9.2E-93 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RPIC_RS02000 f9587fa0ac703ad89d4f443fd883d77d 330 Gene3D G3DSA:3.40.50.300 118 320 5.5E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02000 f9587fa0ac703ad89d4f443fd883d77d 330 PANTHER PTHR30473 1 329 2.0E-161 T 22-04-2016 RPIC_RS02000 f9587fa0ac703ad89d4f443fd883d77d 330 PANTHER PTHR30473:SF1 1 329 2.0E-161 T 22-04-2016 RPIC_RS02000 f9587fa0ac703ad89d4f443fd883d77d 330 SUPERFAMILY SSF52540 117 296 3.12E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 Gene3D G3DSA:3.40.50.720 2 193 6.5E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 89 8.9E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 176 8.9E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 39 8.9E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 137 8.9E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 118 8.9E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 87 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 99 118 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 28 39 5.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 SUPERFAMILY SSF51735 13 193 3.19E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PANTHER PTHR24322 99 130 1.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 PANTHER PTHR24322 29 83 1.1E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07285 2e0308f4cca63d28c5b15502ab20403b 194 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 192 4.2E-46 T 22-04-2016 RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 SUPERFAMILY SSF46785 3 111 3.27E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 Gene3D G3DSA:1.10.10.10 4 84 5.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 Gene3D G3DSA:3.40.190.10 177 259 7.0E-21 T 22-04-2016 RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 PANTHER PTHR30537 1 308 3.1E-113 T 22-04-2016 RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 SUPERFAMILY SSF53850 91 296 6.52E-49 T 22-04-2016 RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 Gene3D G3DSA:3.40.190.10 92 176 1.4E-25 T 22-04-2016 RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.9E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 Pfam PF03466 LysR substrate binding domain 90 291 4.6E-47 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06130 ce6de5105dd1528fb00cc97774925fe8 309 PANTHER PTHR30537:SF5 1 308 3.1E-113 T 22-04-2016 RPIC_RS14250 2ab2688e317e3aea99e544c18c5372a4 204 Gene3D G3DSA:1.20.1540.10 12 191 5.6E-13 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RPIC_RS14250 2ab2688e317e3aea99e544c18c5372a4 204 SUPERFAMILY SSF144091 13 192 6.28E-20 T 22-04-2016 RPIC_RS14250 2ab2688e317e3aea99e544c18c5372a4 204 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 35 192 2.3E-44 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria RPIC_RS14250 2ab2688e317e3aea99e544c18c5372a4 204 Pfam PF01694 Rhomboid family 42 191 6.4E-7 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RPIC_RS17880 2d38c3caeab462076df5bd9e797770fa 179 PANTHER PTHR38593:SF2 1 177 2.9E-22 T 22-04-2016 RPIC_RS17880 2d38c3caeab462076df5bd9e797770fa 179 SUPERFAMILY SSF47240 61 174 4.87E-5 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS17880 2d38c3caeab462076df5bd9e797770fa 179 Gene3D G3DSA:1.20.1260.10 35 158 1.9E-7 T 22-04-2016 IPR012347 Ferritin-related RPIC_RS17880 2d38c3caeab462076df5bd9e797770fa 179 Pfam PF13628 Domain of unknown function (DUF4142) 38 174 6.5E-47 T 22-04-2016 IPR025419 Domain of unknown function DUF4142 RPIC_RS17880 2d38c3caeab462076df5bd9e797770fa 179 PANTHER PTHR38593 1 177 2.9E-22 T 22-04-2016 RPIC_RS14645 c6b1e529caa8e3bc01d655922583b1b3 470 Pfam PF13649 Methyltransferase domain 288 401 2.7E-8 T 22-04-2016 RPIC_RS14645 c6b1e529caa8e3bc01d655922583b1b3 470 SUPERFAMILY SSF53335 263 428 7.68E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14645 c6b1e529caa8e3bc01d655922583b1b3 470 Gene3D G3DSA:3.40.50.150 278 450 3.0E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS09610 8318dd5208faf794c0acfe7c1e1fd496 129 SUPERFAMILY SSF55331 2 127 8.83E-42 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RPIC_RS09610 8318dd5208faf794c0acfe7c1e1fd496 129 Gene3D G3DSA:3.30.429.10 2 127 1.6E-51 T 22-04-2016 RPIC_RS09610 8318dd5208faf794c0acfe7c1e1fd496 129 PANTHER PTHR37950:SF1 2 128 8.5E-40 T 22-04-2016 RPIC_RS09610 8318dd5208faf794c0acfe7c1e1fd496 129 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 2.2E-41 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 RPIC_RS09610 8318dd5208faf794c0acfe7c1e1fd496 129 PANTHER PTHR37950 2 128 8.5E-40 T 22-04-2016 RPIC_RS11745 16108511181a5e7e9b5e7bc1d9222fe1 305 SUPERFAMILY SSF103481 207 304 1.18E-13 T 22-04-2016 RPIC_RS11745 16108511181a5e7e9b5e7bc1d9222fe1 305 PANTHER PTHR12715:SF5 19 304 1.2E-69 T 22-04-2016 RPIC_RS11745 16108511181a5e7e9b5e7bc1d9222fe1 305 PANTHER PTHR12715 19 304 1.2E-69 T 22-04-2016 RPIC_RS11745 16108511181a5e7e9b5e7bc1d9222fe1 305 SUPERFAMILY SSF103481 53 156 6.41E-13 T 22-04-2016 RPIC_RS11745 16108511181a5e7e9b5e7bc1d9222fe1 305 Pfam PF00892 EamA-like transporter family 19 153 6.9E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS11745 16108511181a5e7e9b5e7bc1d9222fe1 305 Pfam PF00892 EamA-like transporter family 170 301 1.5E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 74 5.0E-18 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 Pfam PF02416 mttA/Hcf106 family 4 40 2.3E-7 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 PANTHER PTHR33162:SF4 1 69 1.2E-15 T 22-04-2016 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 PANTHER PTHR33162 1 69 1.2E-15 T 22-04-2016 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 140 16.861 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RPIC_RS15885 98a454025b68062bdf6f21ed4fd9e3d6 170 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.4E-14 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 RPIC_RS15615 2f47af01b701690997b79d0a4c1bde0d 547 PANTHER PTHR11706:SF33 3 26 2.0E-17 T 22-04-2016 RPIC_RS15615 2f47af01b701690997b79d0a4c1bde0d 547 PANTHER PTHR11706:SF33 43 327 2.0E-17 T 22-04-2016 RPIC_RS15615 2f47af01b701690997b79d0a4c1bde0d 547 PANTHER PTHR11706 3 26 2.0E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS15615 2f47af01b701690997b79d0a4c1bde0d 547 PANTHER PTHR11706 43 327 2.0E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS15615 2f47af01b701690997b79d0a4c1bde0d 547 Pfam PF01566 Natural resistance-associated macrophage protein 71 425 2.4E-86 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 215 1.9E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 PANTHER PTHR10909:SF305 1 376 1.5E-174 T 22-04-2016 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 Gene3D G3DSA:1.20.140.10 216 375 2.9E-72 T 22-04-2016 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 SUPERFAMILY SSF56645 2 240 5.5E-86 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 Gene3D G3DSA:2.40.110.10 119 215 2.2E-42 T 22-04-2016 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 PANTHER PTHR10909 1 376 1.5E-174 T 22-04-2016 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 375 1.3E-50 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 Gene3D G3DSA:1.10.540.10 3 117 4.8E-43 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 SUPERFAMILY SSF47203 225 375 1.58E-58 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00595 341a69cfecc0a8bdc83bb67d565af23c 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 116 3.7E-37 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 PRINTS PR00419 Adrenodoxin reductase family signature 28 41 4.7E-6 T 22-04-2016 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 PRINTS PR00419 Adrenodoxin reductase family signature 5 27 4.7E-6 T 22-04-2016 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 PANTHER PTHR16128 3 332 9.5E-66 T 22-04-2016 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Gene3D G3DSA:3.50.50.60 292 331 6.2E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Gene3D G3DSA:3.50.50.60 3 42 6.2E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Gene3D G3DSA:3.50.50.60 116 192 6.2E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Gene3D G3DSA:3.90.660.10 53 115 2.9E-47 T 22-04-2016 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Gene3D G3DSA:3.90.660.10 193 290 2.9E-47 T 22-04-2016 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 SUPERFAMILY SSF51905 295 331 2.2E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 SUPERFAMILY SSF51905 1 202 2.2E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 72 2.8E-13 T 22-04-2016 RPIC_RS02015 9a79ce99602c13e295c11254d4c8f54b 332 Pfam PF01593 Flavin containing amine oxidoreductase 108 283 2.4E-10 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 155 1.5E-36 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 PIRSF PIRSF000102 2 327 1.3E-65 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 Gene3D G3DSA:3.40.50.720 4 156 1.4E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 SUPERFAMILY SSF56327 160 327 1.19E-56 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 328 55.365 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 322 1.6E-143 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 PANTHER PTHR23382 2 328 6.8E-186 T 22-04-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 SUPERFAMILY SSF51735 4 158 3.91E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 Gene3D G3DSA:3.90.110.10 158 327 7.7E-69 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RPIC_RS10585 571e2a0ab51b89ef6e53921a14f9fa04 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 160 320 3.3E-30 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SUPERFAMILY SSF50249 258 359 1.72E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SUPERFAMILY SSF50249 432 534 3.58E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Pfam PF00575 S1 RNA binding domain 364 437 3.1E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Pfam PF00575 S1 RNA binding domain 279 350 4.3E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Pfam PF00575 S1 RNA binding domain 453 523 8.2E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Pfam PF00575 S1 RNA binding domain 192 263 3.2E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Pfam PF00575 S1 RNA binding domain 106 174 7.6E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Pfam PF00575 S1 RNA binding domain 22 88 4.0E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 6 523 5.4E-205 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SMART SM00316 365 437 1.5E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SMART SM00316 106 174 5.6E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SMART SM00316 193 263 6.7E-29 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SMART SM00316 452 523 4.4E-18 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SMART SM00316 278 350 6.6E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SMART SM00316 22 90 8.4E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SUPERFAMILY SSF50249 7 116 4.55E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 42 56 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 158 178 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 111 127 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 129 146 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 87 106 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 333 351 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 24 42 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 293 312 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PRINTS PR00681 Ribosomal protein S1 signature 215 236 2.2E-81 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PIRSF PIRSF002111 1 537 8.8E-216 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Gene3D G3DSA:2.40.50.140 447 524 1.1E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Gene3D G3DSA:2.40.50.140 186 265 2.6E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Gene3D G3DSA:2.40.50.140 105 175 8.5E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Gene3D G3DSA:2.40.50.140 24 104 4.2E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Gene3D G3DSA:2.40.50.140 284 364 3.1E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PANTHER PTHR10724 1 517 8.5E-244 T 22-04-2016 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SUPERFAMILY SSF50249 350 440 1.42E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 Gene3D G3DSA:2.40.50.140 365 446 7.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SUPERFAMILY SSF50249 192 280 2.76E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 PANTHER PTHR10724:SF6 1 517 8.5E-244 T 22-04-2016 RPIC_RS03815 ff8c8f64069b90c5ef387be801ee3c45 562 SUPERFAMILY SSF50249 106 188 7.16E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS07235 a4369be81737a6c4a1e4e7e9a31d69c1 326 Gene3D G3DSA:3.40.50.2300 160 290 5.3E-52 T 22-04-2016 RPIC_RS07235 a4369be81737a6c4a1e4e7e9a31d69c1 326 PANTHER PTHR35271 1 326 3.7E-73 T 22-04-2016 RPIC_RS07235 a4369be81737a6c4a1e4e7e9a31d69c1 326 Pfam PF04392 ABC transporter substrate binding protein 34 324 4.6E-105 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein RPIC_RS07235 a4369be81737a6c4a1e4e7e9a31d69c1 326 Gene3D G3DSA:3.40.50.2300 31 159 1.1E-55 T 22-04-2016 RPIC_RS07235 a4369be81737a6c4a1e4e7e9a31d69c1 326 SUPERFAMILY SSF53822 40 287 2.71E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 145 8.8E-39 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 PANTHER PTHR21708 1 315 5.7E-114 T 22-04-2016 RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 Gene3D G3DSA:3.40.50.720 1 181 1.8E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 Gene3D G3DSA:1.10.1040.10 185 309 6.2E-23 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 308 2.4E-20 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 310 1.0E-62 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 SUPERFAMILY SSF51735 1 133 2.48E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 PANTHER PTHR21708:SF26 1 315 5.7E-114 T 22-04-2016 RPIC_RS00280 e539b17b6d04fab0ba20483eda1984da 317 SUPERFAMILY SSF48179 185 310 6.46E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 15 241 39.45 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 Gene3D G3DSA:3.40.1180.10 11 247 2.7E-93 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 PANTHER PTHR10291 16 253 2.3E-112 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 SUPERFAMILY SSF64005 13 236 1.83E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 240 2.1E-83 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC_RS06370 4b5a3cfaf2aa11f861d06c91e67c976e 258 Pfam PF01255 Putative undecaprenyl diphosphate synthase 22 240 3.6E-76 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 RPIC_RS05800 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455:SF1 2 97 9.5E-14 T 22-04-2016 RPIC_RS05800 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455 2 97 9.5E-14 T 22-04-2016 RPIC_RS05800 77d041757f86b2debdf8798dcaed71f0 111 Pfam PF05717 IS66 Orf2 like protein 6 102 6.9E-27 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RPIC_RS16430 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455:SF1 2 97 9.5E-14 T 22-04-2016 RPIC_RS16430 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455 2 97 9.5E-14 T 22-04-2016 RPIC_RS16430 77d041757f86b2debdf8798dcaed71f0 111 Pfam PF05717 IS66 Orf2 like protein 6 102 6.9E-27 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RPIC_RS07350 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455:SF1 2 97 9.5E-14 T 22-04-2016 RPIC_RS07350 77d041757f86b2debdf8798dcaed71f0 111 PANTHER PTHR36455 2 97 9.5E-14 T 22-04-2016 RPIC_RS07350 77d041757f86b2debdf8798dcaed71f0 111 Pfam PF05717 IS66 Orf2 like protein 6 102 6.9E-27 T 22-04-2016 IPR008878 Transposase IS66, Orf2 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 Pfam PF08281 Sigma-70, region 4 125 173 1.7E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 Gene3D G3DSA:1.10.1740.10 3 77 5.7E-8 T 22-04-2016 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 SUPERFAMILY SSF88659 117 181 6.35E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 SUPERFAMILY SSF88946 6 84 2.63E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 PANTHER PTHR30173 4 184 1.3E-19 T 22-04-2016 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 181 3.0E-20 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS10965 b03cfd6e12f5956e97b338804dd98abd 188 Gene3D G3DSA:1.10.10.10 118 182 2.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 Pfam PF00375 Sodium:dicarboxylate symporter family 28 441 1.5E-99 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 2.46E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PRINTS PR00173 Glutamate-aspartate symporter signature 74 94 2.46E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PRINTS PR00173 Glutamate-aspartate symporter signature 26 46 2.46E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 2.46E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PRINTS PR00173 Glutamate-aspartate symporter signature 104 129 2.46E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 2.46E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PANTHER PTHR11958 26 452 1.2E-246 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 Gene3D G3DSA:1.10.3860.10 24 447 1.1E-96 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 SUPERFAMILY SSF118215 28 441 3.27E-93 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS06535 d1314a209978abe401cd42915485c54d 462 PANTHER PTHR11958:SF5 26 452 1.2E-246 T 22-04-2016 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 30 970 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 21 976 25.951 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 SUPERFAMILY SSF53383 949 971 4.22E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 SUPERFAMILY SSF53383 480 906 4.22E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 Gene3D G3DSA:3.40.640.10 103 325 4.0E-13 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 Gene3D G3DSA:3.40.640.10 522 795 1.3E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 Pfam PF02347 Glycine cleavage system P-protein 29 459 4.7E-172 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 Pfam PF02347 Glycine cleavage system P-protein 496 756 7.1E-12 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 PANTHER PTHR11773 5 979 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 PANTHER PTHR11773:SF1 5 979 0.0 T 22-04-2016 RPIC_RS17290 ebe1d7db7b170236c892694bb7828d8f 979 SUPERFAMILY SSF53383 29 462 3.06E-99 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 SUPERFAMILY SSF51735 5 251 2.45E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PANTHER PTHR24322 155 185 1.3E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PANTHER PTHR24322 10 139 1.3E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 Gene3D G3DSA:3.40.50.720 1 251 4.9E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.6E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12640 029434b8caf2cdffd5f0f0bb02ff9d0f 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 1.3E-64 T 22-04-2016 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 13 377 50.239 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 PANTHER PTHR21152:SF1 11 375 1.2E-178 T 22-04-2016 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 PANTHER PTHR21152 11 375 1.2E-178 T 22-04-2016 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 15 375 7.5E-151 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 Gene3D G3DSA:3.90.1150.10 276 375 7.9E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 PIRSF PIRSF000525 9 378 1.6E-154 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 SUPERFAMILY SSF53383 14 375 1.79E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 Gene3D G3DSA:3.40.640.10 28 275 3.3E-106 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS03785 3dc51902fe81a8eb5aae5063cb92d675 378 Pfam PF00266 Aminotransferase class-V 15 366 1.1E-50 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Pfam PF02954 Bacterial regulatory protein, Fis family 460 499 1.6E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 SUPERFAMILY SSF52172 2 181 3.56E-41 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Pfam PF00158 Sigma-54 interaction domain 136 302 4.3E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 SUPERFAMILY SSF52540 135 378 5.98E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 387 1.3E-190 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 SMART SM00382 156 303 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071:SF15 416 502 1.1E-214 T 22-04-2016 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071:SF15 1 387 1.1E-214 T 22-04-2016 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 SMART SM00448 2 113 2.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071 416 502 1.1E-214 T 22-04-2016 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 PANTHER PTHR32071 1 387 1.1E-214 T 22-04-2016 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 465 482 2.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 482 502 2.4E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:3.40.50.2300 4 127 2.6E-33 T 22-04-2016 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 SUPERFAMILY SSF46689 423 501 3.49E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:1.10.10.60 347 381 3.5E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:1.10.10.60 447 501 3.5E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05415 b368e2e5c3516dbc2ae12907d0d88768 502 Gene3D G3DSA:3.40.50.300 134 308 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 SUPERFAMILY SSF54292 9 97 1.01E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 86 9.9E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PANTHER PTHR19370 35 331 7.0E-56 T 22-04-2016 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 SUPERFAMILY SSF63380 77 203 7.58E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 299 307 7.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 153 160 7.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 229 7.2E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 Pfam PF00175 Oxidoreductase NAD-binding domain 211 314 1.4E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PANTHER PTHR19370:SF128 35 331 7.0E-56 T 22-04-2016 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 Gene3D G3DSA:3.10.20.30 3 97 5.8E-27 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 SUPERFAMILY SSF52343 201 333 1.06E-35 T 22-04-2016 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 235 244 7.6E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 195 204 7.6E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 160 7.6E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 299 307 7.6E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 210 229 7.6E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 148 7.6E-27 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 Gene3D G3DSA:2.40.30.10 107 197 4.5E-24 T 22-04-2016 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 Gene3D G3DSA:3.40.50.80 204 333 5.0E-36 T 22-04-2016 RPIC_RS06780 7e0f9873cbee6cb8a09eb48a7bdcebfe 342 Pfam PF00970 Oxidoreductase FAD-binding domain 118 201 4.7E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 326 399 5.1E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 51 110 5.2E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 549 9.0E-14 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 1.2E-40 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 SUPERFAMILY SSF55124 251 275 9.32E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 SUPERFAMILY SSF55124 314 421 9.32E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 SUPERFAMILY SSF55124 1 126 2.94E-29 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Gene3D G3DSA:3.30.413.10 120 276 4.2E-40 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 PRINTS PR00397 Sirohaem Fe-binding site signature 410 428 4.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 PRINTS PR00397 Sirohaem Fe-binding site signature 456 474 4.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 PANTHER PTHR11493:SF47 1 293 5.2E-159 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 PANTHER PTHR11493:SF47 326 550 5.2E-159 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 PANTHER PTHR11493 1 293 5.2E-159 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 PANTHER PTHR11493 326 550 5.2E-159 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 SUPERFAMILY SSF56014 120 286 4.32E-46 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Gene3D G3DSA:3.90.480.10 320 402 2.9E-38 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Gene3D G3DSA:3.90.480.10 48 117 2.9E-38 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 Gene3D G3DSA:3.30.413.10 408 548 5.1E-38 T 22-04-2016 RPIC_RS13245 05166b35e26a65bdae6c7e8dc694f0ee 553 SUPERFAMILY SSF56014 409 550 4.58E-41 T 22-04-2016 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 SUPERFAMILY SSF54826 2 126 1.22E-35 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 2 369 7.3E-180 T 22-04-2016 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 125 9.7E-35 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 PANTHER PTHR13794:SF55 1 368 9.3E-114 T 22-04-2016 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 SMART SM00922 144 241 6.1E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 SUPERFAMILY SSF51604 113 368 6.16E-65 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 191 222 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 Gene3D G3DSA:3.20.20.120 124 357 3.7E-65 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 Gene3D G3DSA:3.30.390.10 1 123 1.1E-47 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 PANTHER PTHR13794 1 368 9.3E-114 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 Pfam PF13378 Enolase C-terminal domain-like 148 361 1.3E-45 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS06755 d81c7335af532aa38fdd705cf1296d51 369 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 100 125 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 SUPERFAMILY SSF51905 309 426 1.02E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 SUPERFAMILY SSF51905 18 199 1.02E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PANTHER PTHR13789:SF5 21 229 4.2E-81 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PANTHER PTHR13789:SF5 246 431 4.2E-81 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PANTHER PTHR13789 21 229 4.2E-81 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PANTHER PTHR13789 246 431 4.2E-81 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 Gene3D G3DSA:3.50.50.60 310 398 1.2E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 Gene3D G3DSA:3.50.50.60 19 91 1.2E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 Gene3D G3DSA:3.50.50.60 125 204 1.2E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 20 431 4.0E-126 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 Pfam PF01494 FAD binding domain 20 380 8.6E-25 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 1.4E-19 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 1.4E-19 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 20 42 1.4E-19 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 1.4E-19 T 22-04-2016 RPIC_RS15475 7a03a3c0706099079a578e88764c43b8 431 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 336 349 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 SUPERFAMILY SSF55961 160 363 3.22E-44 T 22-04-2016 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 167 363 1.5E-34 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 PANTHER PTHR21266 15 363 2.6E-45 T 22-04-2016 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 Gene3D G3DSA:2.102.10.10 42 138 6.7E-25 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 PANTHER PTHR21266:SF2 15 363 2.6E-45 T 22-04-2016 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 54 69 2.6E-8 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 24 49 2.6E-8 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 94 114 2.6E-8 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 Gene3D G3DSA:3.90.380.10 139 361 6.6E-11 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 Pfam PF00355 Rieske [2Fe-2S] domain 43 121 1.9E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS11975 2266311bb4917aa21c1f4d6365ccc25f 365 SUPERFAMILY SSF50022 5 140 4.06E-34 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Gene3D G3DSA:3.40.50.720 1 90 3.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 PANTHER PTHR23135 1 458 3.2E-248 T 22-04-2016 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Pfam PF08245 Mur ligase middle domain 108 292 7.0E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 SUPERFAMILY SSF53623 98 309 4.45E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Gene3D G3DSA:3.40.1190.10 92 313 3.9E-93 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Pfam PF01225 Mur ligase family, catalytic domain 2 100 5.1E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 454 59.149 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 PANTHER PTHR23135:SF17 1 458 3.2E-248 T 22-04-2016 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 3.4E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 SUPERFAMILY SSF51984 1 90 3.92E-21 T 22-04-2016 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 Gene3D G3DSA:3.90.190.20 314 453 7.1E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 SUPERFAMILY SSF53244 312 453 1.02E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS14905 1c2701090e8e2ca7eec7559b9d9f6a3a 461 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 453 9.1E-223 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Gene3D G3DSA:1.10.10.60 95 146 3.1E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Gene3D G3DSA:1.10.10.60 147 188 3.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 PIRSF PIRSF000409 4 361 2.0E-141 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 SUPERFAMILY SSF53155 196 275 2.94E-22 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 327 333 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 SUPERFAMILY SSF46689 93 139 1.34E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 PANTHER PTHR10815:SF9 165 356 4.4E-115 T 22-04-2016 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 PANTHER PTHR10815 165 356 4.4E-115 T 22-04-2016 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 277 356 3.9E-33 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Gene3D G3DSA:1.10.10.10 276 357 3.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 SMART SM00342 107 189 1.0E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Pfam PF12833 Helix-turn-helix domain 113 190 6.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 278 356 3.2E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Gene3D G3DSA:3.40.10.10 13 94 9.2E-31 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Pfam PF02805 Metal binding domain of Ada 19 82 4.0E-29 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 Gene3D G3DSA:3.30.160.70 189 275 2.4E-35 T 22-04-2016 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 SUPERFAMILY SSF57884 11 99 9.15E-30 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS14065 def454a7dd490bba425a352d3c8a7e89 361 SUPERFAMILY SSF46767 276 356 1.44E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 PANTHER PTHR21343:SF1 16 494 6.5E-222 T 22-04-2016 RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 Gene3D G3DSA:3.40.50.300 16 250 3.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 Gene3D G3DSA:3.40.50.880 262 450 3.8E-29 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 498 211.163 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 17 242 8.9E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 PANTHER PTHR21343 16 494 6.5E-222 T 22-04-2016 RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 17 489 9.0E-142 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 SUPERFAMILY SSF52540 16 249 6.25E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 263 446 1.0E-57 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 RPIC_RS13080 da1ffcf8a9be7431aaa875d8dee10b77 498 SUPERFAMILY SSF52317 264 456 2.52E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Gene3D G3DSA:3.30.930.10 434 608 8.8E-114 T 22-04-2016 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Gene3D G3DSA:3.30.930.10 149 294 8.8E-114 T 22-04-2016 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PANTHER PTHR22594 389 595 1.5E-244 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PANTHER PTHR22594 1 315 1.5E-244 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 18 587 36.231 T 22-04-2016 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Pfam PF02938 GAD domain 326 425 2.9E-27 T 22-04-2016 IPR029351 GAD domain RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Gene3D G3DSA:3.30.1360.30 295 433 3.6E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 SUPERFAMILY SSF50249 18 122 5.33E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 18 606 3.9E-249 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PANTHER PTHR22594:SF5 389 595 1.5E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PANTHER PTHR22594:SF5 1 315 1.5E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Gene3D G3DSA:2.40.50.140 18 124 2.2E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Pfam PF00152 tRNA synthetases class II (D, K and N) 136 582 1.2E-108 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 SUPERFAMILY SSF55261 309 434 1.06E-42 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 542 556 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 498 514 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 225 238 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 Pfam PF01336 OB-fold nucleic acid binding domain 35 119 5.4E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 SUPERFAMILY SSF55681 448 608 1.95E-106 T 22-04-2016 RPIC_RS01670 d532eb6fb544e08ab7f7cc438bd04836 623 SUPERFAMILY SSF55681 128 310 1.95E-106 T 22-04-2016 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 254 340 3.3E-9 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 SMART SM00729 18 217 5.5E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 PIRSF PIRSF037420 5 364 4.0E-117 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 SUPERFAMILY SSF102114 14 322 5.23E-73 T 22-04-2016 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 PANTHER PTHR11228:SF32 14 350 6.2E-103 T 22-04-2016 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 Pfam PF13394 4Fe-4S single cluster domain 26 84 5.3E-7 T 22-04-2016 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 Pfam PF04055 Radical SAM superfamily 24 177 3.3E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 Gene3D G3DSA:3.20.20.70 15 331 2.5E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 Pfam PF13186 Iron-sulfur cluster-binding domain 247 313 7.1E-10 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 13 360 3.9E-165 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 PANTHER PTHR11228 14 350 6.2E-103 T 22-04-2016 RPIC_RS01425 e723c18ada7dfb09428024985ec9798e 386 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 385 190.299 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Gene3D G3DSA:3.30.2060.10 178 251 1.5E-12 T 22-04-2016 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Pfam PF00271 Helicase conserved C-terminal domain 455 564 2.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 PANTHER PTHR24029 18 694 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 SUPERFAMILY SSF52540 478 601 1.69E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 SUPERFAMILY SSF52540 23 434 3.75E-135 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 24 680 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Pfam PF04851 Type III restriction enzyme, res subunit 35 158 2.5E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 SMART SM00487 28 444 2.3E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Gene3D G3DSA:3.40.50.300 297 357 7.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Gene3D G3DSA:3.40.50.300 25 108 7.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Gene3D G3DSA:3.40.50.300 407 427 7.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Hamap MF_00204 UvrABC system protein B [uvrB]. 22 682 43.703 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 SMART SM00490 479 565 9.4E-20 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Gene3D G3DSA:3.40.50.300 438 598 8.7E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Gene3D G3DSA:4.10.860.10 642 685 9.9E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 SUPERFAMILY SSF46600 637 684 5.62E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Pfam PF02151 UvrB/uvrC motif 648 682 2.8E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 SUPERFAMILY SSF52540 56 101 1.69E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04305 cb023e94122cc485e68136ef5c4c2e54 696 Pfam PF12344 Ultra-violet resistance protein B 571 613 3.7E-22 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 352 3.9E-166 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 Gene3D G3DSA:3.20.20.70 9 352 1.9E-157 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 Pfam PF00793 DAHP synthetase I family 42 341 5.8E-104 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 PIRSF PIRSF001361 1 354 1.1E-161 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 SUPERFAMILY SSF51569 7 351 5.13E-138 T 22-04-2016 RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 PANTHER PTHR21225:SF7 1 352 1.5E-237 T 22-04-2016 RPIC_RS14275 404cea2a106e9838d0aff8f6d0a64341 359 PANTHER PTHR21225 1 352 1.5E-237 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS04145 d61722feade6007be3de04b2cd7ee3b7 428 SUPERFAMILY SSF55785 294 418 1.5E-9 T 22-04-2016 IPR000014 PAS domain RPIC_RS04145 d61722feade6007be3de04b2cd7ee3b7 428 Gene3D G3DSA:3.30.450.20 287 422 2.4E-12 T 22-04-2016 RPIC_RS04145 d61722feade6007be3de04b2cd7ee3b7 428 Pfam PF05231 MASE1 13 296 8.7E-47 T 22-04-2016 IPR007895 MASE1 RPIC_RS04145 d61722feade6007be3de04b2cd7ee3b7 428 Pfam PF08447 PAS fold 331 421 1.0E-6 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 Gene3D G3DSA:3.20.20.140 13 341 3.4E-103 T 22-04-2016 RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 PANTHER PTHR11409 1 342 1.4E-156 T 22-04-2016 RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 Pfam PF00962 Adenosine/AMP deaminase 14 334 3.3E-72 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 PANTHER PTHR11409:SF41 1 342 1.4E-156 T 22-04-2016 RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 15 337 8.3E-114 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 SUPERFAMILY SSF51556 12 341 5.51E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS11065 716d1cbefcbaeb1c97fcb0b3e6011a51 345 Hamap MF_01962 Adenine deaminase. 10 326 84.201 T 22-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 SUPERFAMILY SSF55785 219 299 2.09E-7 T 22-04-2016 IPR000014 PAS domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 Gene3D G3DSA:3.30.565.10 498 636 3.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 SUPERFAMILY SSF55874 528 636 2.23E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 SMART SM00091 228 296 4.7E-4 T 22-04-2016 IPR000014 PAS domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 636 9.9E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 Gene3D G3DSA:1.10.287.130 413 493 7.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 PANTHER PTHR24423 214 301 1.8E-46 T 22-04-2016 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 PANTHER PTHR24423 404 635 1.8E-46 T 22-04-2016 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 PANTHER PTHR24423 3 17 1.8E-46 T 22-04-2016 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 PANTHER PTHR24423 343 380 1.8E-46 T 22-04-2016 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 SMART SM00388 420 497 1.5E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 SMART SM00387 546 674 1.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 Pfam PF13188 PAS domain 224 296 1.5E-11 T 22-04-2016 IPR000014 PAS domain RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 Pfam PF00512 His Kinase A (phospho-acceptor) domain 420 494 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 Gene3D G3DSA:3.30.450.20 219 300 9.5E-8 T 22-04-2016 RPIC_RS15040 023ffcf64fa9811830e83473649b135b 679 SUPERFAMILY SSF47384 410 497 1.77E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS03540 ee3819ab8b34b5378ecfb56a0cfefb4d 107 PANTHER PTHR10438 1 105 2.9E-17 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS03540 ee3819ab8b34b5378ecfb56a0cfefb4d 107 Pfam PF00085 Thioredoxin 2 102 2.3E-14 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC_RS03540 ee3819ab8b34b5378ecfb56a0cfefb4d 107 Gene3D G3DSA:3.40.30.10 1 104 8.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03540 ee3819ab8b34b5378ecfb56a0cfefb4d 107 SUPERFAMILY SSF52833 2 105 1.98E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 191 2.3E-35 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 325 4.5E-35 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 326 3.1E-127 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 Gene3D G3DSA:3.40.47.10 169 325 1.9E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 Gene3D G3DSA:3.40.47.10 4 168 3.2E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 PANTHER PTHR18919:SF109 33 326 1.6E-133 T 22-04-2016 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 326 71.338 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 SUPERFAMILY SSF53901 3 326 1.51E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS04500 711049f631ffc408201456afa1b1b823 326 PANTHER PTHR18919 33 326 1.6E-133 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 PANTHER PTHR23508:SF7 20 345 1.7E-228 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 PANTHER PTHR23508:SF7 466 566 1.7E-228 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 SUPERFAMILY SSF103473 468 562 1.22E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 SUPERFAMILY SSF103473 20 344 1.22E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 Pfam PF00083 Sugar (and other) transporter 29 240 7.6E-28 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 Pfam PF00083 Sugar (and other) transporter 459 562 3.4E-5 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 Gene3D G3DSA:1.20.1250.20 25 231 4.0E-24 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 Gene3D G3DSA:1.20.1250.20 464 558 1.5E-25 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 Gene3D G3DSA:1.20.1250.20 255 343 1.5E-25 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 PANTHER PTHR23508 20 345 1.7E-228 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 PANTHER PTHR23508 466 566 1.7E-228 T 22-04-2016 RPIC_RS02270 88eb1693b328bd448c1786aa03b7cd8d 567 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 PANTHER PTHR33375:SF2 31 678 1.8E-87 T 22-04-2016 RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 Pfam PF02195 ParB-like nuclease domain 31 126 8.9E-12 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 PANTHER PTHR33375 31 678 1.8E-87 T 22-04-2016 RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 SMART SM00470 29 127 5.8E-16 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 SUPERFAMILY SSF109709 121 224 5.75E-19 T 22-04-2016 RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 SUPERFAMILY SSF110849 38 129 2.27E-13 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS12865 8d985b6763d864f56a32b7352bca47bd 679 Gene3D G3DSA:3.90.1530.10 24 132 6.9E-16 T 22-04-2016 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 PANTHER PTHR30154:SF28 15 173 1.3E-56 T 22-04-2016 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 50 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 39 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 50 69 4.1E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 SUPERFAMILY SSF46785 22 81 2.02E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 Gene3D G3DSA:3.30.70.920 76 172 1.3E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 Pfam PF13412 Winged helix-turn-helix DNA-binding 23 70 2.2E-18 T 22-04-2016 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 PANTHER PTHR30154 15 173 1.3E-56 T 22-04-2016 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 SMART SM00344 23 132 6.0E-45 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 Pfam PF01037 Lrp/AsnC ligand binding domain 89 163 1.9E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 Gene3D G3DSA:1.10.10.10 21 74 9.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 SUPERFAMILY SSF54909 84 172 8.85E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS09855 1081ee1f1c7d48950dcf605044ee58b1 173 ProSitePatterns PS00519 AsnC-type HTH domain signature. 41 67 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 SUPERFAMILY SSF88697 280 371 3.6E-23 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 Pfam PF00696 Amino acid kinase family 10 238 6.8E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 Gene3D G3DSA:2.30.130.10 278 370 7.6E-27 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 Gene3D G3DSA:3.40.1160.10 9 259 1.3E-57 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PANTHER PTHR11063:SF6 7 372 5.6E-116 T 22-04-2016 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PANTHER PTHR11063 7 372 5.6E-116 T 22-04-2016 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 SMART SM00359 281 364 8.0E-18 T 22-04-2016 IPR002478 PUA domain GO:0003723 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 Pfam PF01472 PUA domain 281 355 1.1E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PIRSF PIRSF000729 4 372 1.0E-131 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 6.9E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 6.9E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 6.9E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 6.9E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 6.9E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 2.2E-130 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.446 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS15095 10f7d668eb3838b8d24a9cbd9b500a1a 372 SUPERFAMILY SSF53633 9 259 3.4E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 PIRSF PIRSF005900 5 166 4.5E-47 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 72 88 2.8E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 48 64 2.8E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 143 161 2.8E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 ProSitePatterns PS00818 Dps protein family signature 1. 48 64 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 PANTHER PTHR30295 6 165 6.5E-67 T 22-04-2016 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 ProSitePatterns PS00819 Dps protein family signature 2. 74 88 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 Gene3D G3DSA:1.20.1260.10 9 165 4.4E-66 T 22-04-2016 IPR012347 Ferritin-related RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 Pfam PF00210 Ferritin-like domain 29 165 3.9E-27 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 PANTHER PTHR30295:SF6 6 165 6.5E-67 T 22-04-2016 RPIC_RS14405 16673df2eaaaa017dcdbe187057fa0d0 166 SUPERFAMILY SSF47240 14 165 3.04E-48 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 SUPERFAMILY SSF46946 2 114 4.88E-46 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.1E-30 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 PIRSF PIRSF002134 1 121 5.2E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 Gene3D G3DSA:1.10.8.50 1 71 2.0E-29 T 22-04-2016 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 Gene3D G3DSA:4.10.910.10 73 120 4.0E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.191 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 PANTHER PTHR10871 1 115 1.9E-63 T 22-04-2016 RPIC_RS16165 3d0028d7dac6822876d9deb3aa5a8041 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 295 6.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 436 5.1E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 SUPERFAMILY SSF55874 285 438 1.96E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PANTHER PTHR24423:SF474 22 37 4.1E-72 T 22-04-2016 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PANTHER PTHR24423:SF474 172 446 4.1E-72 T 22-04-2016 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PANTHER PTHR24423 22 37 4.1E-72 T 22-04-2016 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PANTHER PTHR24423 172 446 4.1E-72 T 22-04-2016 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 Pfam PF08521 Two-component sensor kinase N-terminal 20 152 1.5E-9 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 Gene3D G3DSA:3.30.565.10 299 441 2.3E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 405 2.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 2.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 2.2E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 SMART SM00387 340 450 1.2E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 SUPERFAMILY SSF47384 214 296 8.44E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 SMART SM00388 231 296 2.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02800 bd0bcfe764c4a04b6c816f541f3f3067 458 Gene3D G3DSA:1.10.287.130 223 292 2.3E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 Pfam PF00106 short chain dehydrogenase 5 197 1.5E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PANTHER PTHR24322:SF328 153 185 3.2E-55 T 22-04-2016 RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PANTHER PTHR24322:SF328 8 137 3.2E-55 T 22-04-2016 RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 Gene3D G3DSA:3.40.50.720 1 245 1.8E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.0E-123 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 SUPERFAMILY SSF51735 3 245 1.83E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PANTHER PTHR24322 153 185 3.2E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PANTHER PTHR24322 8 137 3.2E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 7.0E-4 T 22-04-2016 RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09390 48f6ca9dcbb4d3abc0dce5e0c5e21a34 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.5E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 Gene3D G3DSA:1.10.580.10 74 275 9.6E-34 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 Gene3D G3DSA:1.10.1660.10 8 52 1.2E-4 T 22-04-2016 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 Pfam PF00285 Citrate synthase, C-terminal domain 71 388 3.3E-65 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 PANTHER PTHR11739 210 410 2.5E-39 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 PANTHER PTHR11739:SF4 210 410 2.5E-39 T 22-04-2016 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 SUPERFAMILY SSF48256 71 397 8.77E-74 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 SUPERFAMILY SSF46955 4 55 9.16E-9 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 Pfam PF12728 Helix-turn-helix domain 4 55 1.2E-8 T 22-04-2016 RPIC_RS17670 144c83dd46f7870b7d939a99f5843aba 410 Gene3D G3DSA:1.10.230.10 276 321 1.2E-9 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RPIC_RS11760 9d30af92f01d89d000c400e19942aed5 520 PANTHER PTHR30121:SF3 18 440 3.7E-168 T 22-04-2016 RPIC_RS11760 9d30af92f01d89d000c400e19942aed5 520 PANTHER PTHR30121 18 440 3.7E-168 T 22-04-2016 RPIC_RS11760 9d30af92f01d89d000c400e19942aed5 520 Gene3D G3DSA:3.40.50.300 204 381 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11760 9d30af92f01d89d000c400e19942aed5 520 Gene3D G3DSA:3.40.50.300 4 108 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11760 9d30af92f01d89d000c400e19942aed5 520 SUPERFAMILY SSF52540 4 370 7.34E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11760 9d30af92f01d89d000c400e19942aed5 520 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 519 1.7E-246 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 PANTHER PTHR23309 1 284 6.0E-141 T 22-04-2016 RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 SUPERFAMILY SSF48179 185 283 4.76E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 Gene3D G3DSA:3.40.50.720 3 187 1.0E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 183 2.5E-65 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 SUPERFAMILY SSF51735 3 185 5.71E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 207 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 PIRSF PIRSF000105 1 284 2.6E-86 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 Gene3D G3DSA:1.10.1040.10 188 283 1.1E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS00435 f728f05da8cba55365f96614a613e564 284 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 1.9E-34 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS19965 7137b643fa84a567bf31e499947800bb 235 Gene3D G3DSA:3.30.450.20 11 65 3.3E-9 T 22-04-2016 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 SUPERFAMILY SSF52540 13 276 1.64E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PANTHER PTHR22942:SF1 1 344 5.8E-202 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 SUPERFAMILY SSF54752 277 335 3.01E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 Gene3D G3DSA:3.30.250.10 277 335 1.9E-31 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 Pfam PF00154 recA bacterial DNA recombination protein 16 277 2.6E-142 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 13 333 2.8E-173 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 Hamap MF_00268 Protein RecA [recA]. 14 338 52.082 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 Gene3D G3DSA:3.40.50.300 39 276 8.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 102 131 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 252 281 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 219 247 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 306 323 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 136 165 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PRINTS PR00142 RecA protein signature 174 203 3.6E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 PANTHER PTHR22942 1 344 5.8E-202 T 22-04-2016 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 ProSitePatterns PS00321 recA signature. 222 230 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RPIC_RS02310 1a061116dd018364e37e75f368ac570e 352 SMART SM00382 66 237 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 PANTHER PTHR11564:SF7 1 450 1.7E-245 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 PANTHER PTHR11564 1 450 1.7E-245 T 22-04-2016 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 SUPERFAMILY SSF52540 42 372 5.84E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 SMART SM00963 1 86 2.5E-30 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 444 3.7E-171 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Pfam PF02978 Signal peptide binding domain 343 442 4.6E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 SMART SM00962 114 310 8.4E-116 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Gene3D G3DSA:3.40.50.300 108 311 3.5E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 SUPERFAMILY SSF47446 343 445 1.34E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Pfam PF00448 SRP54-type protein, GTPase domain 115 310 9.1E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.7E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 454 32.968 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 SMART SM00382 113 315 9.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Gene3D G3DSA:1.10.260.30 343 446 1.8E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 RPIC_RS15055 eb2f66a06044a75634097c66d1f039ce 471 Gene3D G3DSA:1.20.120.140 2 89 3.4E-32 T 22-04-2016 RPIC_RS16805 a351f58cb7b2d33ec27966ad2622559d 250 SUPERFAMILY SSF54523 17 101 1.65E-9 T 22-04-2016 RPIC_RS16805 a351f58cb7b2d33ec27966ad2622559d 250 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 1.6E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16805 a351f58cb7b2d33ec27966ad2622559d 250 Pfam PF13633 Prokaryotic N-terminal methylation site 15 39 2.6E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16805 a351f58cb7b2d33ec27966ad2622559d 250 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16825 2526f13b553e6347de67addcd0ba1c8d 280 Pfam PF01203 Type II secretion system (T2SS), protein N 61 275 4.1E-35 T 22-04-2016 IPR022792 Type II secretion system, protein N RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 PANTHER PTHR21011 1 121 7.6E-38 T 22-04-2016 RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.785 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 PANTHER PTHR21011:SF1 1 121 7.6E-38 T 22-04-2016 RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.5E-33 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 Pfam PF01250 Ribosomal protein S6 3 90 8.7E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 SUPERFAMILY SSF54995 1 104 1.16E-36 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS05870 2d1a63bb89975b173c4870f6ff65ff5e 122 Gene3D G3DSA:3.30.70.60 1 104 5.1E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PANTHER PTHR11404 1 192 6.4E-113 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.4E-42 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 SUPERFAMILY SSF54719 82 191 9.3E-47 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PIRSF PIRSF000349 1 192 6.5E-90 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 PANTHER PTHR11404:SF8 1 192 6.4E-113 T 22-04-2016 RPIC_RS13805 774dae845c947599903120f37a120d73 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 81 1.2E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 SUPERFAMILY SSF46609 1 84 2.49E-36 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS13805 774dae845c947599903120f37a120d73 192 Gene3D G3DSA:1.10.287.990 20 82 5.6E-25 T 22-04-2016 RPIC_RS16050 0cafba9e00145ef58abf72dbbbafd7b6 219 Gene3D G3DSA:3.30.70.60 104 209 5.7E-31 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RPIC_RS16050 0cafba9e00145ef58abf72dbbbafd7b6 219 Gene3D G3DSA:1.10.287.540 68 96 1.5E-4 T 22-04-2016 IPR023218 UPF0291 structural domain RPIC_RS16050 0cafba9e00145ef58abf72dbbbafd7b6 219 Pfam PF04350 Pilus assembly protein, PilO 62 199 1.1E-40 T 22-04-2016 IPR007445 Pilus assembly protein, PilO RPIC_RS16050 0cafba9e00145ef58abf72dbbbafd7b6 219 PIRSF PIRSF016482 10 215 4.3E-44 T 22-04-2016 IPR007445 Pilus assembly protein, PilO RPIC_RS16050 0cafba9e00145ef58abf72dbbbafd7b6 219 PANTHER PTHR39555:SF1 10 212 8.9E-38 T 22-04-2016 RPIC_RS16050 0cafba9e00145ef58abf72dbbbafd7b6 219 PANTHER PTHR39555 10 212 8.9E-38 T 22-04-2016 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 477 626 2.2E-6 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 PANTHER PTHR18968:SF134 361 778 4.0E-187 T 22-04-2016 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 SUPERFAMILY SSF52518 29 211 6.47E-21 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 PANTHER PTHR18968 361 778 4.0E-187 T 22-04-2016 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 SUPERFAMILY SSF53323 742 986 5.23E-34 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 Gene3D G3DSA:3.40.920.10 744 941 3.7E-16 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 SUPERFAMILY SSF52518 457 642 1.03E-14 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 750 936 3.2E-23 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 Gene3D G3DSA:3.40.50.970 513 684 9.5E-11 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS16855 aff692e373a9fa0f03a12161a7cb2bab 1186 Gene3D G3DSA:3.40.50.970 50 226 1.3E-4 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 SUPERFAMILY SSF90123 2 283 5.23E-57 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 Gene3D G3DSA:1.20.1560.10 2 293 2.6E-61 T 22-04-2016 RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 Pfam PF00005 ABC transporter 323 366 2.4E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 Pfam PF00664 ABC transporter transmembrane region 2 256 1.2E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 PANTHER PTHR24221:SF250 1 366 8.5E-168 T 22-04-2016 RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 Gene3D G3DSA:3.40.50.300 303 366 3.5E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 PANTHER PTHR24221 1 366 8.5E-168 T 22-04-2016 RPIC_RS20335 04afbd14fb8ffe30520e1afe489f5359 366 SUPERFAMILY SSF52540 251 366 3.36E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11460 fa89c58dce0221cb24a06e7d9823a97e 193 Gene3D G3DSA:3.30.470.30 24 118 4.9E-13 T 22-04-2016 RPIC_RS11460 fa89c58dce0221cb24a06e7d9823a97e 193 Pfam PF09414 RNA ligase 14 172 1.1E-19 T 22-04-2016 IPR021122 RNA ligase domain, REL/Rln2 RPIC_RS11460 fa89c58dce0221cb24a06e7d9823a97e 193 SUPERFAMILY SSF56091 7 143 1.51E-19 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 483 489 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 713 1.1E-30 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 603 614 1.1E-30 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 635 1.1E-30 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 1.1E-30 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 495 1.1E-30 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 678 697 1.1E-30 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Gene3D G3DSA:3.40.50.1000 452 495 1.3E-55 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Gene3D G3DSA:3.40.50.1000 606 746 1.3E-55 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Gene3D G3DSA:2.70.150.10 241 381 2.4E-35 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF55008 3 69 7.98E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Pfam PF00702 haloacid dehalogenase-like hydrolase 478 692 3.0E-48 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Gene3D G3DSA:3.40.1110.10 496 605 1.2E-20 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 253 770 3.4E-93 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Pfam PF00122 E1-E2 ATPase 252 472 5.0E-67 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00943 Copper-transporting ATPase signature 655 672 2.0E-9 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00943 Copper-transporting ATPase signature 464 479 2.0E-9 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00943 Copper-transporting ATPase signature 204 223 2.0E-9 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00943 Copper-transporting ATPase signature 403 417 2.0E-9 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00943 Copper-transporting ATPase signature 270 288 2.0E-9 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PRINTS PR00943 Copper-transporting ATPase signature 751 765 2.0E-9 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Pfam PF00403 Heavy-metal-associated domain 6 67 8.8E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF56784 479 499 3.06E-59 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF56784 536 782 3.06E-59 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 PANTHER PTHR24093 21 786 4.7E-238 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 Gene3D G3DSA:3.30.70.100 4 68 9.7E-15 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF81653 283 380 1.96E-29 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 219 784 4.5E-185 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 201 785 5.0E-180 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF81665 727 749 1.7E-14 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF81665 218 284 1.7E-14 T 22-04-2016 RPIC_RS08415 db44f6da2fc3e18dc2b2348f3622c773 814 SUPERFAMILY SSF81665 381 475 1.7E-14 T 22-04-2016 RPIC_RS16335 9c113264812af44c01c149e81fd50768 263 PIRSF PIRSF012281 1 263 3.4E-123 T 22-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 RPIC_RS16335 9c113264812af44c01c149e81fd50768 263 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 193 249 1.7E-15 T 22-04-2016 IPR019220 Domain of unknown function DUF2135 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 Pfam PF00210 Ferritin-like domain 8 143 4.3E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PIRSF PIRSF002560 1 157 1.4E-72 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 2.4E-75 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 Gene3D G3DSA:1.20.1260.10 1 156 7.5E-66 T 22-04-2016 IPR012347 Ferritin-related RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 86 106 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 44 64 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 107 127 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 65 85 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 23 43 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 3 22 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PRINTS PR00601 Bacterioferritin signature 128 149 2.2E-67 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PANTHER PTHR30295 1 155 1.5E-49 T 22-04-2016 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 PANTHER PTHR30295:SF9 1 155 1.5E-49 T 22-04-2016 RPIC_RS01000 7a8ff156d807e8f6a94a495d35106722 159 SUPERFAMILY SSF47240 1 157 6.04E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 SUPERFAMILY SSF47413 32 93 1.94E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 PANTHER PTHR40661 42 278 2.8E-14 T 22-04-2016 RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 SMART SM00530 38 92 6.7E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 Pfam PF01381 Helix-turn-helix 41 92 7.1E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 Pfam PF00717 Peptidase S24-like 194 259 9.1E-8 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 SUPERFAMILY SSF51306 172 274 2.88E-18 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 Gene3D G3DSA:2.10.109.10 171 274 2.9E-15 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS11490 6bdc0d1737b4895af3de7ba1bb407135 278 Gene3D G3DSA:1.10.260.40 34 96 8.0E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 PANTHER PTHR23105 21 229 1.2E-75 T 22-04-2016 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 PANTHER PTHR23105:SF5 21 229 1.2E-75 T 22-04-2016 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 Gene3D G3DSA:3.40.50.790 69 159 6.2E-42 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 5.9E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 6.9E-104 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 Gene3D G3DSA:3.30.190.20 161 225 6.1E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 Gene3D G3DSA:3.30.190.20 16 68 6.1E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 SUPERFAMILY SSF56808 7 225 1.26E-80 T 22-04-2016 IPR023674 Ribosomal protein L1-like RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 PIRSF PIRSF002155 1 227 5.7E-77 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIC_RS16380 4a18f62ede58bef4e125c27b88dfcf98 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.882 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 109 1.0E-31 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 SUPERFAMILY SSF54292 5 104 3.01E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 1.3E-8 T 22-04-2016 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 SUPERFAMILY SSF46548 105 233 2.09E-38 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 PANTHER PTHR11921 7 233 8.2E-128 T 22-04-2016 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 Gene3D G3DSA:3.10.20.30 4 104 2.5E-36 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 227 1.1E-82 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 PANTHER PTHR11921:SF29 7 233 8.2E-128 T 22-04-2016 RPIC_RS12385 00eab2ce7c822c2a9fd2b786c0c095b3 235 Gene3D G3DSA:1.10.1060.10 105 233 5.6E-48 T 22-04-2016 RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:3.30.1270.10 82 134 3.1E-36 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:3.30.1270.10 212 239 3.1E-36 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 Pfam PF01709 Transcriptional regulator 5 237 2.8E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:1.10.10.200 1 79 3.5E-36 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 PANTHER PTHR12532 1 241 2.6E-111 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 SUPERFAMILY SSF75625 3 239 3.27E-95 T 22-04-2016 IPR029072 YebC-like RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 9.1E-93 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 Gene3D G3DSA:3.30.70.980 135 205 4.0E-27 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 RPIC_RS11765 d7cf2f74e11c3877ec23dd155b1cb218 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.22 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 267 8.0E-76 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 SUPERFAMILY SSF51735 6 160 7.65E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 245 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 1.5E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 267 26.612 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 PANTHER PTHR11645 1 274 9.9E-95 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 PANTHER PTHR11645:SF0 1 274 9.9E-95 T 22-04-2016 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 PIRSF PIRSF000193 4 270 2.8E-70 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 Gene3D G3DSA:1.10.3730.10 163 267 5.9E-33 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 SUPERFAMILY SSF48179 163 271 4.42E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 Gene3D G3DSA:3.40.50.720 4 160 1.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14390 4217634bb95b36bc1458d987b4f813d4 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 3.4E-17 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 Gene3D G3DSA:3.40.50.150 255 463 6.4E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PANTHER PTHR22807 150 464 2.6E-85 T 22-04-2016 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 274 284 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 393 409 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 446 463 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 245 259 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 343 355 8.8E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 Gene3D G3DSA:3.30.70.1170 196 253 5.5E-18 T 22-04-2016 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 Pfam PF01189 16S rRNA methyltransferase RsmB/F 263 461 9.1E-52 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 SUPERFAMILY SSF53335 161 463 2.46E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS13405 d63b63c5393b0782924a82012156f2d1 465 PANTHER PTHR22807:SF30 150 464 2.6E-85 T 22-04-2016 RPIC_RS07780 ef4d7cc7a1dad4029a0b7b9e962c48f7 575 SUPERFAMILY SSF52540 374 466 4.65E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07780 ef4d7cc7a1dad4029a0b7b9e962c48f7 575 SUPERFAMILY SSF52540 1 144 4.65E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07780 ef4d7cc7a1dad4029a0b7b9e962c48f7 575 Gene3D G3DSA:3.40.50.300 1 128 5.0E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07780 ef4d7cc7a1dad4029a0b7b9e962c48f7 575 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 446 573 2.1E-26 T 22-04-2016 IPR018760 Protein of unknown function DUF2326 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 295 4.3E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 135 207 3.3E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 PIRSF PIRSF000006 5 302 5.1E-111 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 SUPERFAMILY SSF46626 219 302 1.83E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 Gene3D G3DSA:1.10.760.10 67 89 1.0E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 Gene3D G3DSA:1.10.760.10 128 212 1.0E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 PANTHER PTHR33751 31 305 5.6E-87 T 22-04-2016 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 44 300 5.6E-86 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 SUPERFAMILY SSF46626 113 213 1.38E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 SUPERFAMILY SSF46626 62 85 1.38E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 43 89 1.7E-24 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 PRINTS PR00605 Class IC cytochrome C signature 143 154 4.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 PRINTS PR00605 Class IC cytochrome C signature 273 295 4.3E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 PANTHER PTHR33751:SF1 31 305 5.6E-87 T 22-04-2016 RPIC_RS05505 78d4d71274c9238e3ebf595d68cd0e9d 307 Gene3D G3DSA:1.10.760.10 219 302 1.3E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PANTHER PTHR11670:SF38 1 307 3.2E-295 T 22-04-2016 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PANTHER PTHR11670:SF38 327 468 3.2E-295 T 22-04-2016 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 SUPERFAMILY SSF53732 2 468 2.75E-165 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 468 2.0E-238 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 Gene3D G3DSA:3.30.499.10 3 158 7.5E-20 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PANTHER PTHR11670 1 307 3.2E-295 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PANTHER PTHR11670 327 468 3.2E-295 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 469 60.66 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 460 5.4E-155 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 402 415 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 343 354 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 286 300 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 209 222 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 133 148 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 119 132 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 195 208 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 108 116 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 PRINTS PR00415 Aconitase family signature 82 95 5.2E-47 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 Gene3D G3DSA:3.30.499.10 293 303 2.2E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 Gene3D G3DSA:3.30.499.10 335 468 2.2E-61 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10545 48fcc6ec79d494ca2af829ca362f2a58 469 Gene3D G3DSA:3.40.1060.10 167 279 5.9E-41 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 SUPERFAMILY SSF55031 197 304 9.03E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 Gene3D G3DSA:3.30.70.360 195 310 4.6E-40 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 PANTHER PTHR11014:SF63 24 404 3.0E-135 T 22-04-2016 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 PANTHER PTHR11014 24 404 3.0E-135 T 22-04-2016 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 SUPERFAMILY SSF53187 311 401 7.86E-84 T 22-04-2016 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 SUPERFAMILY SSF53187 24 210 7.86E-84 T 22-04-2016 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 Pfam PF07687 Peptidase dimerisation domain 200 290 8.2E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 PIRSF PIRSF005962 17 404 2.5E-114 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 Gene3D G3DSA:3.40.630.10 23 191 4.8E-95 T 22-04-2016 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 Gene3D G3DSA:3.40.630.10 311 402 4.8E-95 T 22-04-2016 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 Pfam PF01546 Peptidase family M20/M25/M40 86 398 6.4E-36 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS06980 41a532b132c8e47ed7db0892126c9b6a 404 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 28 389 3.5E-99 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 248 2.0E-36 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 Gene3D G3DSA:3.20.20.70 5 257 1.2E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 PANTHER PTHR19278:SF1 1 225 4.5E-65 T 22-04-2016 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 SMART SM00934 17 255 1.1E-50 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 3 255 1.1E-76 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 90 103 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 SUPERFAMILY SSF51366 3 260 3.49E-79 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 2 268 36.693 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS14865 c229104ad28728ac0a9ad0e41f4bccb0 271 PANTHER PTHR19278 1 225 4.5E-65 T 22-04-2016 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Gene3D G3DSA:1.10.287.130 515 586 7.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Pfam PF08446 PAS fold 24 123 5.8E-15 T 22-04-2016 IPR013654 PAS fold-2 GO:0006355 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Gene3D G3DSA:3.30.450.40 142 314 1.9E-7 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 722 1.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 741 1.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 PRINTS PR00344 Bacterial sensor protein C-terminal signature 671 685 1.1E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Pfam PF01590 GAF domain 151 315 5.9E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SMART SM00388 523 591 1.4E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SUPERFAMILY SSF55781 134 319 3.92E-41 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SMART SM00387 632 744 5.6E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 633 743 5.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SMART SM00065 150 328 2.3E-4 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Pfam PF00512 His Kinase A (phospho-acceptor) domain 525 591 1.8E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Pfam PF00360 Phytochrome region 330 507 4.2E-44 T 22-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 PANTHER PTHR24423 102 741 2.3E-95 T 22-04-2016 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SUPERFAMILY SSF47384 509 591 4.12E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 PANTHER PTHR24423:SF518 102 741 2.3E-95 T 22-04-2016 RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SUPERFAMILY SSF55781 326 509 3.79E-43 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SUPERFAMILY SSF55785 25 123 9.42E-19 T 22-04-2016 IPR000014 PAS domain RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 Gene3D G3DSA:3.30.565.10 592 747 1.6E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15505 0a0d3924e92d37eab4c94ae805ccf6ed 762 SUPERFAMILY SSF55874 591 745 5.5E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09675 41f497f5aea0c2cbe725649f8d4df8cf 141 SUPERFAMILY SSF54427 6 130 2.06E-21 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS09675 41f497f5aea0c2cbe725649f8d4df8cf 141 Gene3D G3DSA:3.10.450.50 5 132 8.7E-22 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS09675 41f497f5aea0c2cbe725649f8d4df8cf 141 Pfam PF12680 SnoaL-like domain 11 115 9.0E-7 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC_RS02950 2403564e64bae4f399c536407c862434 287 PANTHER PTHR30373:SF2 10 287 4.3E-51 T 22-04-2016 RPIC_RS02950 2403564e64bae4f399c536407c862434 287 PANTHER PTHR30373 10 287 4.3E-51 T 22-04-2016 RPIC_RS02950 2403564e64bae4f399c536407c862434 287 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 41 168 2.6E-35 T 22-04-2016 IPR007621 TPM domain RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.2E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.205 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 5.2E-78 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 Gene3D G3DSA:3.40.50.700 21 149 1.6E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 PANTHER PTHR11995:SF19 11 156 8.4E-123 T 22-04-2016 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 SUPERFAMILY SSF56770 9 153 1.96E-67 T 22-04-2016 RPIC_RS10880 d4f6c6ed3f13402242f542debf5715ba 160 PANTHER PTHR11995 11 156 8.4E-123 T 22-04-2016 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 313 41.91 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 312 8.7E-93 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 PANTHER PTHR11358 1 314 1.6E-98 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 SUPERFAMILY SSF52768 10 312 4.5E-78 T 22-04-2016 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 PIRSF PIRSF036979 33 314 4.6E-32 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 Pfam PF00491 Arginase family 42 311 1.4E-60 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 ProSitePatterns PS01053 Arginase family signature. 242 263 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 Gene3D G3DSA:3.40.800.10 3 312 1.7E-96 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC_RS13765 5fbf0122603efec46b5ab58d7c7377e5 315 PANTHER PTHR11358:SF35 1 314 1.6E-98 T 22-04-2016 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 Pfam PF03466 LysR substrate binding domain 82 161 2.9E-10 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 Gene3D G3DSA:3.40.190.10 86 161 7.7E-10 T 22-04-2016 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 SUPERFAMILY SSF46785 1 105 3.39E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 4.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 PANTHER PTHR30537:SF1 1 164 9.6E-83 T 22-04-2016 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 SUPERFAMILY SSF53850 80 161 3.08E-11 T 22-04-2016 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 7.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 7.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 7.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 Gene3D G3DSA:1.10.10.10 1 70 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02725 8156d05bd9c1da1a6235c485298a8c10 164 PANTHER PTHR30537 1 164 9.6E-83 T 22-04-2016 RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 PANTHER PTHR11472 50 699 2.8E-178 T 22-04-2016 RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 60 156 4.26E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 233 290 4.26E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 640 678 4.26E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 Pfam PF04851 Type III restriction enzyme, res subunit 67 297 8.3E-5 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 Gene3D G3DSA:3.40.50.300 525 678 3.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 PANTHER PTHR11472:SF37 50 699 2.8E-178 T 22-04-2016 RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SMART SM00491 551 681 2.1E-41 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 233 276 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 351 364 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 525 620 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 SUPERFAMILY SSF52540 651 668 1.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 Pfam PF13307 Helicase C-terminal domain 532 694 8.3E-33 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 Gene3D G3DSA:3.40.50.300 463 473 1.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 Gene3D G3DSA:3.40.50.300 66 165 1.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09425 77ecf4c4677158e2117f7583c697e53c 725 Gene3D G3DSA:3.40.50.300 236 301 1.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 Gene3D G3DSA:1.10.10.60 267 314 2.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 SMART SM00342 229 312 1.8E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF46689 265 314 3.67E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF51182 139 183 8.62E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF51182 47 96 8.62E-8 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 Pfam PF12852 Cupin 10 197 3.8E-33 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 266 308 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 258 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 Gene3D G3DSA:1.10.10.60 210 266 4.0E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 Pfam PF12833 Helix-turn-helix domain 235 313 4.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019:SF77 42 114 4.1E-49 T 22-04-2016 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019:SF77 131 320 4.1E-49 T 22-04-2016 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019 42 114 4.1E-49 T 22-04-2016 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 PANTHER PTHR11019 131 320 4.1E-49 T 22-04-2016 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 SUPERFAMILY SSF46689 214 263 1.55E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS06965 95467209488fa8a9191faab9f0cad9c3 320 Gene3D G3DSA:2.60.120.10 8 96 1.2E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS14800 3cf6b8342783b03e07b564c0a7aff14b 578 Pfam PF00920 Dehydratase family 41 560 2.5E-174 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS14800 3cf6b8342783b03e07b564c0a7aff14b 578 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS14800 3cf6b8342783b03e07b564c0a7aff14b 578 SUPERFAMILY SSF143975 5 378 5.89E-124 T 22-04-2016 RPIC_RS14800 3cf6b8342783b03e07b564c0a7aff14b 578 PANTHER PTHR21000:SF14 3 578 5.5E-271 T 22-04-2016 RPIC_RS14800 3cf6b8342783b03e07b564c0a7aff14b 578 SUPERFAMILY SSF52016 379 565 5.26E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS14800 3cf6b8342783b03e07b564c0a7aff14b 578 PANTHER PTHR21000 3 578 5.5E-271 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Gene3D G3DSA:3.40.50.300 3 210 2.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Pfam PF03144 Elongation factor Tu domain 2 227 301 4.8E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 3.2E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 7.1E-59 T 22-04-2016 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 402 60.267 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 SUPERFAMILY SSF50447 207 309 2.7E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.1E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Gene3D G3DSA:2.40.30.10 211 306 2.1E-35 T 22-04-2016 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PANTHER PTHR23115:SF151 1 400 8.4E-259 T 22-04-2016 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 402 1.6E-224 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 SUPERFAMILY SSF50465 310 402 4.03E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Pfam PF03143 Elongation factor Tu C-terminal domain 306 400 2.0E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 SUPERFAMILY SSF52540 6 221 3.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 Gene3D G3DSA:2.40.30.10 308 401 1.9E-46 T 22-04-2016 RPIC_RS16290 aaf77258205d947430ae8046d89f6157 402 PANTHER PTHR23115 1 400 8.4E-259 T 22-04-2016 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 12 34 0.0015 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 PANTHER PTHR31956:SF6 12 276 7.2E-141 T 22-04-2016 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 PANTHER PTHR31956:SF6 305 535 7.2E-141 T 22-04-2016 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 Pfam PF04185 Phosphoesterase family 55 450 1.2E-114 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 12 718 3.6E-290 T 22-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 PANTHER PTHR31956 12 276 7.2E-141 T 22-04-2016 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 PANTHER PTHR31956 305 535 7.2E-141 T 22-04-2016 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 Pfam PF05506 Domain of unknown function (DUF756) 623 704 8.8E-30 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC_RS15025 c35e2ac5ea4fc2c34691f2b0bd4bb9b9 719 Pfam PF05506 Domain of unknown function (DUF756) 522 611 9.2E-24 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 Gene3D G3DSA:3.10.580.10 198 324 7.4E-39 T 22-04-2016 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 PANTHER PTHR38418 1 322 2.0E-34 T 22-04-2016 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 1.5E-104 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 Pfam PF00571 CBS domain 204 260 2.6E-5 T 22-04-2016 IPR000644 CBS domain RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 Pfam PF00571 CBS domain 273 324 3.2E-6 T 22-04-2016 IPR000644 CBS domain RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 PANTHER PTHR38418:SF1 1 322 2.0E-34 T 22-04-2016 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 Gene3D G3DSA:3.40.50.10490 14 197 6.0E-53 T 22-04-2016 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 SMART SM00116 278 326 0.018 T 22-04-2016 IPR000644 CBS domain RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 SMART SM00116 213 261 5.0 T 22-04-2016 IPR000644 CBS domain RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 PIRSF PIRSF004692 2 327 2.3E-128 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 SUPERFAMILY SSF53697 11 324 1.53E-64 T 22-04-2016 RPIC_RS01310 bcac0036c4a31208bfd8e23ad90f56f4 327 Pfam PF01380 SIS domain 46 175 1.5E-30 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 Gene3D G3DSA:1.20.58.410 7 93 5.5E-17 T 22-04-2016 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.732 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 1.7E-163 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 Gene3D G3DSA:3.30.160.20 214 288 7.8E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 SMART SM00937 63 178 2.6E-66 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 Pfam PF03462 PCRF domain 13 203 4.0E-72 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 PANTHER PTHR11075:SF9 1 356 3.5E-170 T 22-04-2016 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 PANTHER PTHR11075 1 356 3.5E-170 T 22-04-2016 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 SUPERFAMILY SSF75620 12 353 3.79E-137 T 22-04-2016 RPIC_RS15530 c0f5ab9df1e072efb9cb5a64cbb59644 360 Pfam PF00472 RF-1 domain 214 321 2.5E-43 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 PANTHER PTHR30118 1 313 1.2E-94 T 22-04-2016 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 4.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 Pfam PF03466 LysR substrate binding domain 96 300 2.9E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 Gene3D G3DSA:1.10.10.10 3 85 8.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 Gene3D G3DSA:3.40.190.10 279 307 7.3E-31 T 22-04-2016 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 Gene3D G3DSA:3.40.190.10 91 174 7.3E-31 T 22-04-2016 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 SUPERFAMILY SSF46785 6 83 1.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 SUPERFAMILY SSF53850 91 303 3.16E-38 T 22-04-2016 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 PANTHER PTHR30118:SF8 1 313 1.2E-94 T 22-04-2016 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 Gene3D G3DSA:3.40.190.10 175 275 4.8E-25 T 22-04-2016 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS12070 4aa117cbcf796e52c69ddd012eb09f9e 325 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 SUPERFAMILY SSF57938 141 217 2.88E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Pfam PF00684 DnaJ central domain 154 214 1.2E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 SUPERFAMILY SSF49493 122 176 5.89E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 PANTHER PTHR24078:SF190 1 354 2.0E-152 T 22-04-2016 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 PRINTS PR00625 DnaJ domain signature 7 25 2.7E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 PRINTS PR00625 DnaJ domain signature 42 62 2.7E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 PRINTS PR00625 DnaJ domain signature 62 81 2.7E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 PRINTS PR00625 DnaJ domain signature 25 40 2.7E-33 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 PANTHER PTHR24078 1 354 2.0E-152 T 22-04-2016 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Gene3D G3DSA:2.60.260.20 217 261 5.3E-19 T 22-04-2016 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Gene3D G3DSA:2.60.260.20 120 148 5.3E-19 T 22-04-2016 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 379 41.617 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 SUPERFAMILY SSF49493 220 268 5.89E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Gene3D G3DSA:1.10.287.110 1 107 6.5E-37 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Pfam PF01556 DnaJ C terminal domain 128 340 3.1E-41 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Gene3D G3DSA:2.10.230.10 149 216 8.9E-25 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Pfam PF00226 DnaJ domain 5 67 6.1E-28 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 SMART SM00271 4 62 2.2E-32 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 SUPERFAMILY SSF49493 265 351 2.75E-23 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 Gene3D G3DSA:2.60.260.20 263 340 2.4E-23 T 22-04-2016 RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 SUPERFAMILY SSF46565 1 109 1.26E-36 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS14135 d6a24540555778a98b9ccf316bd78c46 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 356 1.2E-136 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RPIC_RS11815 676accb423e43cbf0401bfd1f3a667af 260 PANTHER PTHR10730:SF27 8 171 3.7E-21 T 22-04-2016 RPIC_RS11815 676accb423e43cbf0401bfd1f3a667af 260 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 6 181 8.7E-29 T 22-04-2016 IPR002654 Glycosyl transferase, family 25 RPIC_RS11815 676accb423e43cbf0401bfd1f3a667af 260 PANTHER PTHR10730 8 171 3.7E-21 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 650 5.5E-21 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 SUPERFAMILY SSF64484 16 950 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 SUPERFAMILY SSF64484 1140 1370 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 594 32.225 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Gene3D G3DSA:2.40.50.100 1018 1056 3.4E-5 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1382 10.419 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 6.4E-86 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 397 4.4E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 486 1.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 772 1322 2.5E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 769 1.2E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1025 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376:SF32 1309 1406 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376:SF32 1183 1268 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376:SF32 976 1164 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376:SF32 4 552 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376:SF32 576 949 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Gene3D G3DSA:2.40.50.100 988 1017 9.8E-6 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Gene3D G3DSA:2.40.50.100 1163 1215 1.6E-4 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 SMART SM00663 236 515 6.7E-173 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Gene3D G3DSA:2.40.40.20 418 490 1.6E-36 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 Gene3D G3DSA:2.40.40.20 350 377 1.6E-36 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376 1309 1406 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376 1183 1268 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376 976 1164 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376 4 552 0.0 T 22-04-2016 RPIC_RS16360 71647c87b014abdcf21e04416fb2fa06 1409 PANTHER PTHR19376 576 949 0.0 T 22-04-2016 RPIC_RS07810 f4077cb69ffe214682d99933f2a4a7ec 352 SUPERFAMILY SSF103481 47 150 5.62E-13 T 22-04-2016 RPIC_RS07810 f4077cb69ffe214682d99933f2a4a7ec 352 Pfam PF00892 EamA-like transporter family 159 286 4.8E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS07810 f4077cb69ffe214682d99933f2a4a7ec 352 Pfam PF00892 EamA-like transporter family 9 147 1.8E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS07810 f4077cb69ffe214682d99933f2a4a7ec 352 PANTHER PTHR12715 9 326 9.5E-25 T 22-04-2016 RPIC_RS07810 f4077cb69ffe214682d99933f2a4a7ec 352 SUPERFAMILY SSF103481 202 292 2.09E-10 T 22-04-2016 RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 Pfam PF00027 Cyclic nucleotide-binding domain 35 119 3.5E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 Gene3D G3DSA:2.60.120.10 11 146 3.8E-27 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 Gene3D G3DSA:1.10.10.10 151 220 4.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 Pfam PF13545 Crp-like helix-turn-helix domain 154 220 6.7E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 SMART SM00100 16 137 4.5E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 SUPERFAMILY SSF51206 9 145 2.62E-30 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 PANTHER PTHR24567:SF30 9 222 8.2E-37 T 22-04-2016 RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 SMART SM00419 166 214 8.1E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 PANTHER PTHR24567 9 222 8.2E-37 T 22-04-2016 RPIC_RS10375 ff844125d45d95c01168b0eb460dde06 225 SUPERFAMILY SSF46785 151 220 8.75E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14750 907d672cf96986f269b48d02b2118a25 335 PANTHER PTHR32196 1 335 4.0E-125 T 22-04-2016 RPIC_RS14750 907d672cf96986f269b48d02b2118a25 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 323 3.2E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS14750 907d672cf96986f269b48d02b2118a25 335 PANTHER PTHR32196:SF37 1 335 4.0E-125 T 22-04-2016 RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 SUPERFAMILY SSF75217 15 186 1.24E-29 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 20 262 3.3E-55 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 PANTHER PTHR12029 24 116 5.3E-24 T 22-04-2016 RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 PANTHER PTHR12029 132 185 5.3E-24 T 22-04-2016 RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 Pfam PF00588 SpoU rRNA Methylase family 22 178 8.7E-29 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 Gene3D G3DSA:3.40.1280.10 11 185 6.7E-28 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS04955 e5e344da7dc50b40d931d45ba8985e9a 282 PIRSF PIRSF004808 16 271 5.1E-62 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PIRSF PIRSF002097 1 77 2.8E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 Pfam PF02954 Bacterial regulatory protein, Fis family 34 74 4.8E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 SUPERFAMILY SSF46689 8 76 1.04E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 Gene3D G3DSA:1.10.10.60 7 76 1.0E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 2.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 2.2E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01591 DNA-binding protein FIS signature 21 36 8.8E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01591 DNA-binding protein FIS signature 5 21 8.8E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PRINTS PR01591 DNA-binding protein FIS signature 36 48 8.8E-6 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 RPIC_RS01870 0eadc616c0dd715c9d314bd91ad558d2 77 PANTHER PTHR32071 2 76 2.1E-17 T 22-04-2016 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 277 2.9E-12 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 493 618 1.3E-32 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 SUPERFAMILY SSF56645 36 278 5.24E-42 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 5 34 5.7E-10 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 PANTHER PTHR10909 1 500 4.6E-203 T 22-04-2016 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Gene3D G3DSA:1.20.140.10 305 479 5.4E-45 T 22-04-2016 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Gene3D G3DSA:1.10.540.10 36 156 1.0E-6 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 SUPERFAMILY SSF47203 310 483 4.19E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 PANTHER PTHR10909:SF269 1 500 4.6E-203 T 22-04-2016 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 306 474 3.1E-18 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS07150 3a8aeff07b0992aeb91555f8d1c96831 622 Gene3D G3DSA:2.40.110.10 160 278 4.9E-24 T 22-04-2016 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 35 516 1.5E-201 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 SUPERFAMILY SSF74650 35 404 1.26E-162 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 PANTHER PTHR30504 34 518 1.1E-231 T 22-04-2016 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 PIRSF PIRSF006281 1 520 8.9E-223 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 SUPERFAMILY SSF81296 408 519 1.18E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 Gene3D G3DSA:2.60.40.10 409 519 2.0E-36 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 PANTHER PTHR30504:SF4 34 518 1.1E-231 T 22-04-2016 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 Gene3D G3DSA:2.70.98.10 34 406 1.6E-172 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC_RS15565 335b6a06aa0b3ecaa3596bad1a0873da 520 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 17 519 61.779 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 Gene3D G3DSA:3.10.450.50 118 172 8.1E-34 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 Gene3D G3DSA:3.10.450.50 30 74 8.1E-34 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 Gene3D G3DSA:1.10.10.640 75 115 2.5E-29 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 Gene3D G3DSA:1.10.10.640 173 209 2.5E-29 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 PIRSF PIRSF004649 1 211 2.0E-44 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 PANTHER PTHR36573 4 211 1.4E-34 T 22-04-2016 RPIC_RS15975 2626f2851192933afb0bc809868e4e0f 211 Pfam PF05494 MlaC protein 37 199 1.7E-50 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 12 214 7.2E-51 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 Gene3D G3DSA:3.90.870.10 11 212 1.6E-71 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 Pfam PF01300 Telomere recombination 23 204 4.7E-52 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 Pfam PF03481 Putative GTP-binding controlling metal-binding 206 331 2.4E-21 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 PANTHER PTHR17490 1 335 7.0E-84 T 22-04-2016 RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 PIRSF PIRSF004930 2 336 3.6E-100 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 PANTHER PTHR17490:SF3 1 335 7.0E-84 T 22-04-2016 RPIC_RS02440 0667d66e60921821af1e8918a0b2475c 337 SUPERFAMILY SSF55821 12 217 3.05E-57 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC_RS10665 bd310a1f5b4656440f305b60adec3ed5 244 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 12 204 1.6E-34 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS10665 bd310a1f5b4656440f305b60adec3ed5 244 SMART SM00855 11 173 1.0E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS10665 bd310a1f5b4656440f305b60adec3ed5 244 PANTHER PTHR23029 5 216 5.3E-28 T 22-04-2016 RPIC_RS10665 bd310a1f5b4656440f305b60adec3ed5 244 Gene3D G3DSA:3.40.50.1240 9 214 2.1E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS10665 bd310a1f5b4656440f305b60adec3ed5 244 SUPERFAMILY SSF53254 10 214 8.25E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 PANTHER PTHR24023 58 382 1.2E-26 T 22-04-2016 RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 Gene3D G3DSA:3.40.50.10540 8 215 4.3E-92 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 Gene3D G3DSA:3.40.50.10540 305 382 4.3E-92 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 Pfam PF02515 CoA-transferase family III 11 372 1.9E-112 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 Gene3D G3DSA:3.30.1540.10 222 304 3.3E-20 T 22-04-2016 RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 SUPERFAMILY SSF89796 8 382 3.79E-118 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS10145 4a4af7283da73e599d03fbf198efb195 384 PANTHER PTHR24023:SF593 58 382 1.2E-26 T 22-04-2016 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 Gene3D G3DSA:3.30.70.260 138 194 1.1E-26 T 22-04-2016 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 SUPERFAMILY SSF75445 130 207 2.22E-22 T 22-04-2016 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 PANTHER PTHR11934 1 224 2.1E-104 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 SUPERFAMILY SSF100950 1 150 1.18E-41 T 22-04-2016 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 226 32.373 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 Gene3D G3DSA:3.40.50.1360 1 137 1.8E-51 T 22-04-2016 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 12 223 1.7E-63 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 PANTHER PTHR11934:SF11 1 224 2.1E-104 T 22-04-2016 RPIC_RS05350 e3ad85d90496356a1a2491d8d693a77c 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 221 3.8E-56 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 PANTHER PTHR10359 1 209 2.2E-87 T 22-04-2016 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 SUPERFAMILY SSF48150 2 208 9.74E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 TIGRFAM TIGR01083 nth: endonuclease III 4 194 6.6E-86 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.391 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 PANTHER PTHR10359:SF18 1 209 2.2E-87 T 22-04-2016 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 SMART SM00478 38 185 2.2E-54 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 Gene3D G3DSA:1.10.1670.10 123 207 1.2E-34 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.6E-6 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 Gene3D G3DSA:1.10.340.30 22 122 3.2E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 4.0E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS04280 e8415207140051fdeaee427040cab8fc 214 PIRSF PIRSF001435 1 210 4.5E-52 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 PANTHER PTHR10909:SF341 1 360 2.6E-73 T 22-04-2016 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 Gene3D G3DSA:2.40.110.10 118 209 7.0E-16 T 22-04-2016 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 350 1.3E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 118 210 1.5E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 SUPERFAMILY SSF47203 223 365 2.42E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 Gene3D G3DSA:1.20.140.10 210 358 5.3E-32 T 22-04-2016 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 96 7.5E-12 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 PANTHER PTHR10909 1 360 2.6E-73 T 22-04-2016 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 Gene3D G3DSA:1.10.540.10 1 103 1.6E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS10795 32452e0b0f8eb38c052b1c2795ac86f4 376 SUPERFAMILY SSF56645 1 215 5.5E-42 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PANTHER PTHR24093:SF317 28 791 2.1E-267 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Pfam PF00403 Heavy-metal-associated domain 34 87 1.0E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PANTHER PTHR24093 28 791 2.1E-267 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 498 504 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Gene3D G3DSA:2.70.150.10 244 396 2.5E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 226 796 8.0E-124 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF81665 396 489 5.49E-16 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF81665 244 298 5.49E-16 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF81665 744 769 5.49E-16 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF55008 30 95 2.09E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 797 2.7E-178 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Pfam PF00122 E1-E2 ATPase 265 487 2.3E-68 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF56784 553 794 4.07E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF56784 495 514 4.07E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Gene3D G3DSA:3.40.50.1000 623 762 2.5E-41 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Gene3D G3DSA:3.40.50.1000 469 510 2.5E-41 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Gene3D G3DSA:3.30.70.100 104 171 6.1E-9 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF55008 103 171 1.13E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Gene3D G3DSA:3.40.1110.10 511 622 1.1E-15 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 SUPERFAMILY SSF81653 297 395 4.71E-25 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00941 Cadmium-transporting ATPase signature 225 237 4.5E-18 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00941 Cadmium-transporting ATPase signature 361 377 4.5E-18 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00941 Cadmium-transporting ATPase signature 380 394 4.5E-18 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00941 Cadmium-transporting ATPase signature 208 225 4.5E-18 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00941 Cadmium-transporting ATPase signature 279 299 4.5E-18 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00941 Cadmium-transporting ATPase signature 34 43 4.5E-18 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 3.0E-22 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 3.0E-22 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 345 359 3.0E-22 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 3.0E-22 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 3.0E-22 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 778 3.9E-76 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Gene3D G3DSA:3.30.70.100 30 94 5.4E-8 T 22-04-2016 RPIC_RS08900 e3789b7ffa313ce99916223539859702 800 Pfam PF00702 haloacid dehalogenase-like hydrolase 493 708 6.4E-43 T 22-04-2016 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.009 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 1.7E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 PANTHER PTHR18804 1 38 4.5E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 7.0E-10 T 22-04-2016 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 Pfam PF00444 Ribosomal protein L36 1 38 2.4E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16170 85f7f2aefbf41293b9049134283d0868 38 SUPERFAMILY SSF57840 1 38 7.98E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 Gene3D G3DSA:3.60.20.10 174 312 1.9E-82 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 Gene3D G3DSA:3.60.20.10 395 622 1.9E-82 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 Gene3D G3DSA:2.30.120.10 313 370 4.6E-16 T 22-04-2016 RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 PANTHER PTHR34218:SF3 40 795 6.4E-234 T 22-04-2016 RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 PANTHER PTHR34218 40 795 6.4E-234 T 22-04-2016 RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 SUPERFAMILY SSF56235 41 790 7.97E-164 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 Gene3D G3DSA:1.10.439.10 41 173 7.4E-35 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 RPIC_RS13915 7c94dea241be11bee099d2978a907e05 795 Pfam PF01804 Penicillin amidase 42 783 1.8E-132 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 19 339 9.4E-114 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SMART SM00532 16 484 2.0E-241 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SUPERFAMILY SSF52113 734 811 7.03E-20 T 22-04-2016 IPR001357 BRCT domain RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 PANTHER PTHR23389:SF9 536 586 2.1E-176 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 PANTHER PTHR23389:SF9 18 518 2.1E-176 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 PANTHER PTHR23389 536 586 2.1E-176 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 PANTHER PTHR23389 18 518 2.1E-176 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Gene3D G3DSA:3.40.50.10190 734 811 3.0E-26 T 22-04-2016 IPR001357 BRCT domain RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SUPERFAMILY SSF56091 16 337 1.42E-109 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SMART SM00278 565 584 280.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SMART SM00278 482 501 290.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SMART SM00278 597 616 8.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SUPERFAMILY SSF50249 339 419 1.34E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Gene3D G3DSA:1.10.150.20 471 556 1.1E-21 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SMART SM00292 735 812 1.0E-16 T 22-04-2016 IPR001357 BRCT domain RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 736 809 4.4E-15 T 22-04-2016 IPR001357 BRCT domain RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 133 162 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Pfam PF12826 Helix-hairpin-helix motif 563 625 2.9E-18 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 24 639 9.0E-202 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 352 367 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Gene3D G3DSA:1.10.150.20 557 637 9.6E-28 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Hamap MF_01588 DNA ligase [ligA]. 15 809 56.89 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Gene3D G3DSA:2.40.50.140 340 412 8.4E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Gene3D G3DSA:1.10.287.610 14 80 4.1E-28 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 343 417 3.3E-34 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Gene3D G3DSA:3.30.470.30 137 273 1.5E-51 T 22-04-2016 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 443 470 5.4E-12 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RPIC_RS06320 d14c8cd2faebcc351bc31a9d75e72715 817 SUPERFAMILY SSF47781 440 635 7.63E-54 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS06775 6c333a51c6e23e6ba4e8574779229db6 162 PANTHER PTHR41534:SF1 12 162 5.3E-66 T 22-04-2016 RPIC_RS06775 6c333a51c6e23e6ba4e8574779229db6 162 PANTHER PTHR41534 12 162 5.3E-66 T 22-04-2016 RPIC_RS06775 6c333a51c6e23e6ba4e8574779229db6 162 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 8 162 5.0E-75 T 22-04-2016 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 RPIC_RS06775 6c333a51c6e23e6ba4e8574779229db6 162 SUPERFAMILY SSF54427 5 161 3.51E-57 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS06775 6c333a51c6e23e6ba4e8574779229db6 162 Pfam PF00866 Ring hydroxylating beta subunit 14 154 5.2E-53 T 22-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 RPIC_RS06775 6c333a51c6e23e6ba4e8574779229db6 162 Gene3D G3DSA:3.10.450.50 4 155 5.1E-58 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 SUPERFAMILY SSF46689 173 225 1.16E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 Gene3D G3DSA:1.10.10.60 178 225 4.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 Pfam PF00072 Response regulator receiver domain 4 115 3.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-34 T 22-04-2016 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 SUPERFAMILY SSF52172 1 124 2.28E-36 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 PANTHER PTHR32071:SF17 4 118 1.5E-37 T 22-04-2016 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 PANTHER PTHR32071 4 118 1.5E-37 T 22-04-2016 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 SMART SM00448 2 114 3.1E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18210 aba9e7f73148310fb3bbf92260c8f8f3 236 Pfam PF02954 Bacterial regulatory protein, Fis family 184 223 4.1E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 SUPERFAMILY SSF160240 221 300 1.44E-19 T 22-04-2016 RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 299 1.8E-19 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 Gene3D G3DSA:3.30.70.1350 219 300 1.3E-22 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 300 1.5E-66 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 Gene3D G3DSA:1.20.1510.10 21 218 3.7E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 SUPERFAMILY SSF161111 18 219 1.44E-53 T 22-04-2016 RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 PANTHER PTHR11562 16 300 2.6E-85 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 PANTHER PTHR11562:SF18 16 300 2.6E-85 T 22-04-2016 RPIC_RS07835 7eb43936f2e3eb833c0061f357b80c88 307 Pfam PF01545 Cation efflux family 25 218 1.0E-45 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 SUPERFAMILY SSF53822 31 400 1.74E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 PANTHER PTHR30483 1 402 1.3E-189 T 22-04-2016 RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 Gene3D G3DSA:3.40.50.2300 27 154 4.7E-33 T 22-04-2016 RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 Gene3D G3DSA:3.40.50.2300 303 349 4.7E-33 T 22-04-2016 RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 PANTHER PTHR30483:SF17 1 402 1.3E-189 T 22-04-2016 RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 Gene3D G3DSA:3.40.50.2300 159 302 2.0E-20 T 22-04-2016 RPIC_RS17535 e02f7aeae040f807a8e9531731e51b3d 402 Pfam PF13458 Periplasmic binding protein 31 365 1.0E-90 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.4E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184 54 141 4.9E-184 T 22-04-2016 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184 160 418 4.9E-184 T 22-04-2016 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SUPERFAMILY SSF50249 49 125 5.43E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SMART SM00382 170 349 6.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Gene3D G3DSA:1.10.720.10 1 47 1.1E-20 T 22-04-2016 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Gene3D G3DSA:3.40.50.300 130 418 9.1E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.6E-30 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SMART SM00959 5 47 9.1E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SMART SM00357 52 118 1.3E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.0E-209 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 9.8E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Gene3D G3DSA:2.40.50.140 49 117 6.5E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SUPERFAMILY SSF68912 1 46 1.22E-11 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.651 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184:SF34 54 141 4.9E-184 T 22-04-2016 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 PANTHER PTHR15184:SF34 160 418 4.9E-184 T 22-04-2016 RPIC_RS05120 d6d8c0f0eb41cdbc119a772e68ec5c9c 420 SUPERFAMILY SSF52540 90 371 9.77E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 PANTHER PTHR21631 1 526 5.5E-267 T 22-04-2016 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 22 526 2.2E-227 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 Gene3D G3DSA:1.20.1220.12 411 520 7.5E-31 T 22-04-2016 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 PANTHER PTHR21631:SF1 1 526 5.5E-267 T 22-04-2016 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 SUPERFAMILY SSF51645 5 526 1.31E-186 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 PIRSF PIRSF001363 1 526 1.3E-246 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 Pfam PF01274 Malate synthase 11 526 8.8E-198 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 RPIC_RS06140 0ff1697543e9c8f4bf4fce643a27b69e 526 Gene3D G3DSA:3.20.20.360 71 407 1.2E-113 T 22-04-2016 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 39.683 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PRINTS PR00395 Ribosomal protein S2 signature 86 103 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PRINTS PR00395 Ribosomal protein S2 signature 5 23 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PRINTS PR00395 Ribosomal protein S2 signature 36 45 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PRINTS PR00395 Ribosomal protein S2 signature 174 185 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PRINTS PR00395 Ribosomal protein S2 signature 157 174 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PRINTS PR00395 Ribosomal protein S2 signature 195 209 7.3E-35 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 9.3E-98 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 PANTHER PTHR12534 3 229 1.2E-107 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 Gene3D G3DSA:1.10.287.610 99 151 3.9E-22 T 22-04-2016 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 Pfam PF00318 Ribosomal protein S2 8 223 1.5E-90 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 SUPERFAMILY SSF52313 5 230 6.02E-91 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 Gene3D G3DSA:3.40.50.10490 22 98 3.0E-60 T 22-04-2016 RPIC_RS06350 c609b124349f7ede5275ee0d7fb79da0 247 Gene3D G3DSA:3.40.50.10490 157 232 3.0E-60 T 22-04-2016 RPIC_RS03545 85a80b78531938867a5f9a887ec73224 138 ProSitePatterns PS00550 Hemerythrin family signature. 53 76 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 RPIC_RS03545 85a80b78531938867a5f9a887ec73224 138 Pfam PF01814 Hemerythrin HHE cation binding domain 15 120 3.4E-10 T 22-04-2016 IPR012312 Haemerythrin-like RPIC_RS03545 85a80b78531938867a5f9a887ec73224 138 PANTHER PTHR37164 3 138 4.2E-15 T 22-04-2016 RPIC_RS03545 85a80b78531938867a5f9a887ec73224 138 Gene3D G3DSA:1.20.120.50 1 124 2.0E-24 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC_RS03545 85a80b78531938867a5f9a887ec73224 138 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 124 5.2E-20 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC_RS03545 85a80b78531938867a5f9a887ec73224 138 SUPERFAMILY SSF47188 1 124 4.97E-26 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 SUPERFAMILY SSF46689 568 670 9.68E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Pfam PF02954 Bacterial regulatory protein, Fis family 629 667 2.7E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 PANTHER PTHR32071 362 682 4.1E-134 T 22-04-2016 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Pfam PF01590 GAF domain 106 216 5.8E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 652 672 7.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 635 652 7.6E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Gene3D G3DSA:3.40.50.300 362 531 4.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 SMART SM00382 378 522 4.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 SUPERFAMILY SSF52540 362 598 9.08E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Gene3D G3DSA:1.10.10.60 618 669 1.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 445 460 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Gene3D G3DSA:3.30.450.40 160 217 9.3E-5 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Gene3D G3DSA:3.30.450.20 237 294 7.7E-4 T 22-04-2016 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 SUPERFAMILY SSF55781 71 214 3.89E-8 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Pfam PF00158 Sigma-54 interaction domain 362 523 4.8E-64 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 568 577 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS01395 58ca0e13d3c0e45775391d68160843c1 687 Gene3D G3DSA:1.10.8.60 547 601 2.1E-15 T 22-04-2016 RPIC_RS06825 b4af319403f43baf674eb95998497cd0 69 Pfam PF07866 Protein of unknown function (DUF1653) 8 66 3.5E-18 T 22-04-2016 IPR023387 DUF1653-like domain RPIC_RS06825 b4af319403f43baf674eb95998497cd0 69 Gene3D G3DSA:2.30.30.320 3 68 6.9E-17 T 22-04-2016 IPR023387 DUF1653-like domain RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 247 9.9E-60 T 22-04-2016 RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PANTHER PTHR24322 157 188 3.8E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PANTHER PTHR24322 7 140 3.8E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 Gene3D G3DSA:3.40.50.720 3 248 8.9E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 SUPERFAMILY SSF51735 3 247 3.24E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13655 6bd440e8d8c3ee1d85199c9f6d68160c 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 8.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Pfam PF03725 3' exoribonuclease family, domain 2 149 211 4.6E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SMART SM00316 622 692 6.5E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Gene3D G3DSA:1.10.10.400 229 316 5.8E-21 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 PIRSF PIRSF005499 3 724 3.7E-294 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SMART SM00322 554 619 1.3E-13 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF54791 556 642 1.78E-23 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF55666 147 236 2.38E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF55666 452 551 1.22E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF46915 241 323 2.01E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 322 1.5E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF54211 297 490 6.58E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 PANTHER PTHR11252 3 724 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Pfam PF00013 KH domain 559 615 2.9E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Gene3D G3DSA:3.30.230.70 3 226 2.0E-84 T 22-04-2016 IPR027408 PNPase/RNase PH domain RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Gene3D G3DSA:3.30.230.70 317 543 7.0E-89 T 22-04-2016 IPR027408 PNPase/RNase PH domain RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 695 29.981 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF50249 622 699 2.16E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 3.3E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Pfam PF01138 3' exoribonuclease family, domain 1 326 458 6.6E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Pfam PF00575 S1 RNA binding domain 621 692 3.3E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 SUPERFAMILY SSF54211 3 146 1.47E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 PANTHER PTHR11252:SF0 3 724 0.0 T 22-04-2016 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Gene3D G3DSA:2.40.50.140 621 695 3.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS10915 235c01cabaaeb84487765c5bb723cc11 724 Gene3D G3DSA:3.30.1370.10 553 620 2.2E-26 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 19.03 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 SMART SM00739 3 30 1.3E-4 T 22-04-2016 IPR005824 KOW RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 SUPERFAMILY SSF50104 3 97 2.17E-27 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 6.9E-21 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 3.1E-29 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 Pfam PF00467 KOW motif 6 34 4.4E-5 T 22-04-2016 IPR005824 KOW RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 Gene3D G3DSA:2.30.30.30 3 86 8.7E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC_RS16225 a2d82274d91805b42c68fccc56995421 102 PANTHER PTHR12903 3 97 1.0E-33 T 22-04-2016 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 364 2.3E-20 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Gene3D G3DSA:3.40.120.10 252 364 1.4E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 PANTHER PTHR22573:SF28 1 461 2.7E-178 T 22-04-2016 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 171 190 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 218 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 1.4E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 143 5.0E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 450 2.4E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 SUPERFAMILY SSF55957 367 461 6.1E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Gene3D G3DSA:3.40.120.10 7 163 3.6E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 SUPERFAMILY SSF53738 155 256 1.41E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Gene3D G3DSA:3.40.120.10 173 250 6.5E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 PANTHER PTHR22573 1 461 2.7E-178 T 22-04-2016 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 SUPERFAMILY SSF53738 4 178 1.14E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Gene3D G3DSA:3.30.310.50 370 459 2.4E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 SUPERFAMILY SSF53738 259 355 1.65E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS03125 6b12b10aeb2cd6f6b1a224533de7c37d 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 5.8E-27 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS14315 583a304d7e993c53482e9a10c4cd4208 125 PANTHER PTHR33931 1 112 2.2E-23 T 22-04-2016 RPIC_RS14315 583a304d7e993c53482e9a10c4cd4208 125 Pfam PF03788 LrgA family 12 105 4.1E-27 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 RPIC_RS14315 583a304d7e993c53482e9a10c4cd4208 125 PANTHER PTHR33931:SF2 1 112 2.2E-23 T 22-04-2016 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 Gene3D G3DSA:2.40.50.140 286 344 1.1E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 SUPERFAMILY SSF52540 4 244 6.96E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 Gene3D G3DSA:3.40.50.300 3 234 2.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 PANTHER PTHR24220 5 264 1.7E-163 T 22-04-2016 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 PANTHER PTHR24220 283 291 1.7E-163 T 22-04-2016 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 Pfam PF00005 ABC transporter 20 161 5.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 SUPERFAMILY SSF50331 236 361 6.8E-25 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 PANTHER PTHR24220:SF151 5 264 1.7E-163 T 22-04-2016 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 PANTHER PTHR24220:SF151 283 291 1.7E-163 T 22-04-2016 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 Pfam PF08402 TOBE domain 284 353 1.5E-4 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC_RS05445 8dac8fdc95e04b9ca985add767d2e4e1 365 SMART SM00382 28 219 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 PANTHER PTHR11662:SF3 3 416 2.7E-121 T 22-04-2016 RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 Gene3D G3DSA:1.20.1250.20 10 204 2.9E-44 T 22-04-2016 RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 SUPERFAMILY SSF103473 6 415 2.62E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 PANTHER PTHR11662 3 416 2.7E-121 T 22-04-2016 RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 Pfam PF07690 Major Facilitator Superfamily 17 257 9.3E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 Pfam PF07690 Major Facilitator Superfamily 267 413 3.2E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS03380 0cc13603b98cff208fc203ac7d2618fd 426 Gene3D G3DSA:1.20.1250.20 224 415 3.3E-33 T 22-04-2016 RPIC_RS01865 2467426fb811b537def327264e679376 524 SUPERFAMILY SSF53927 215 524 1.2E-124 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC_RS01865 2467426fb811b537def327264e679376 524 Gene3D G3DSA:3.40.140.20 247 364 7.0E-48 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 Pfam PF02142 MGS-like domain 14 129 2.6E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS01865 2467426fb811b537def327264e679376 524 PANTHER PTHR11692 1 524 8.6E-303 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 Gene3D G3DSA:3.40.140.20 372 514 6.0E-55 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 PIRSF PIRSF000414 1 524 1.9E-216 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 524 6.9E-224 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 SMART SM00798 134 456 2.0E-208 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 SMART SM00851 14 129 6.6E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS01865 2467426fb811b537def327264e679376 524 PANTHER PTHR11692:SF2 1 524 8.6E-303 T 22-04-2016 RPIC_RS01865 2467426fb811b537def327264e679376 524 SUPERFAMILY SSF52335 2 193 5.1E-71 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS01865 2467426fb811b537def327264e679376 524 Gene3D G3DSA:3.40.50.1380 1 187 7.1E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS01865 2467426fb811b537def327264e679376 524 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 524 44.708 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS01865 2467426fb811b537def327264e679376 524 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 454 2.6E-118 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 Gene3D G3DSA:3.40.50.300 362 597 7.0E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 SUPERFAMILY SSF90123 27 343 9.94E-48 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 PANTHER PTHR24221 4 606 0.0 T 22-04-2016 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 SUPERFAMILY SSF52540 351 602 5.43E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 SMART SM00382 387 578 4.1E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 PANTHER PTHR24221:SF203 4 606 0.0 T 22-04-2016 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 Pfam PF00005 ABC transporter 380 532 2.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 Gene3D G3DSA:1.20.1560.10 31 335 3.0E-34 T 22-04-2016 RPIC_RS04105 456070f8d4bbfd72b449564d351ef2e8 610 Pfam PF00664 ABC transporter transmembrane region 43 304 2.2E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS04350 6527f27111631519b0828871f9975086 133 Gene3D G3DSA:3.90.1010.10 2 129 2.0E-56 T 22-04-2016 RPIC_RS04350 6527f27111631519b0828871f9975086 133 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 9.7E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 RPIC_RS04350 6527f27111631519b0828871f9975086 133 SUPERFAMILY SSF82649 2 126 2.2E-48 T 22-04-2016 RPIC_RS04350 6527f27111631519b0828871f9975086 133 PANTHER PTHR10093:SF3 1 126 7.2E-95 T 22-04-2016 RPIC_RS04350 6527f27111631519b0828871f9975086 133 PANTHER PTHR10093 1 126 7.2E-95 T 22-04-2016 RPIC_RS04350 6527f27111631519b0828871f9975086 133 Pfam PF01592 NifU-like N terminal domain 3 125 9.0E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 Pfam PF00347 Ribosomal protein L6 12 82 3.7E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 Pfam PF00347 Ribosomal protein L6 90 164 2.3E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 6.6E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.671269E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.671269E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.671269E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 SUPERFAMILY SSF56053 1 82 1.3E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 PANTHER PTHR11655:SF14 1 176 1.3E-86 T 22-04-2016 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.819 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 Gene3D G3DSA:3.90.930.12 2 82 7.6E-28 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 Gene3D G3DSA:3.90.930.12 83 177 8.5E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 PANTHER PTHR11655 1 176 1.3E-86 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 PIRSF PIRSF002162 1 177 5.3E-45 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS16205 46d2bf5e89b98ab951431dc39bbf502c 177 SUPERFAMILY SSF56053 83 177 3.01E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 RPIC_RS17375 728fac24b68f1003d4beb3b2e77ff3c6 67 Pfam PF12085 Protein of unknown function (DUF3562) 6 64 1.1E-27 T 22-04-2016 IPR021945 Protein of unknown function DUF3562 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 PANTHER PTHR33516:SF2 1 213 1.5E-87 T 22-04-2016 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 137 148 4.1E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 165 177 4.1E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 136 4.1E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 Gene3D G3DSA:2.10.109.10 91 212 2.2E-43 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 SUPERFAMILY SSF51306 90 212 2.09E-35 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 Hamap MF_00015 LexA repressor [lexA]. 3 214 32.937 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 Pfam PF00717 Peptidase S24-like 129 195 6.9E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 Gene3D G3DSA:1.10.10.10 1 68 1.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 Pfam PF01726 LexA DNA binding domain 1 65 7.3E-28 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 SUPERFAMILY SSF46785 3 69 2.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 PANTHER PTHR33516 1 213 1.5E-87 T 22-04-2016 RPIC_RS05855 d9e17d2b9e8f61ca265b5a6cc629fc70 216 TIGRFAM TIGR00498 lexA: repressor LexA 1 213 1.5E-70 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RPIC_RS13930 22d18b3ae00b5f4e77be521e613de980 105 PANTHER PTHR36540 4 105 1.5E-33 T 22-04-2016 RPIC_RS13930 22d18b3ae00b5f4e77be521e613de980 105 Pfam PF06865 Protein of unknown function (DUF1255) 14 104 4.8E-39 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 RPIC_RS13930 22d18b3ae00b5f4e77be521e613de980 105 SUPERFAMILY SSF51182 13 104 3.85E-36 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS13930 22d18b3ae00b5f4e77be521e613de980 105 PANTHER PTHR36540:SF1 4 105 1.5E-33 T 22-04-2016 RPIC_RS13930 22d18b3ae00b5f4e77be521e613de980 105 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 12 105 27.57 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 RPIC_RS13930 22d18b3ae00b5f4e77be521e613de980 105 Gene3D G3DSA:2.60.120.10 12 104 7.4E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS15090 0fe39292d3d7d72fa321a4d78b5ac80b 209 Pfam PF08750 CNP1-like family 43 200 1.4E-50 T 22-04-2016 IPR014861 Uncharacterised domain CNP1 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 Pfam PF07690 Major Facilitator Superfamily 9 358 4.2E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 PANTHER PTHR23513 333 431 1.2E-72 T 22-04-2016 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 PANTHER PTHR23513 1 316 1.2E-72 T 22-04-2016 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 PANTHER PTHR23513:SF8 333 431 1.2E-72 T 22-04-2016 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 PANTHER PTHR23513:SF8 1 316 1.2E-72 T 22-04-2016 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 Gene3D G3DSA:1.20.1250.20 5 203 2.5E-13 T 22-04-2016 RPIC_RS06175 ca26a0fb3b7ca03ae5381b927b82964a 438 SUPERFAMILY SSF103473 5 423 3.27E-22 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS18640 0b5b6a5d019d858c4626b9845da46df8 44 Pfam PF00468 Ribosomal protein L34 1 43 9.0E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS18640 0b5b6a5d019d858c4626b9845da46df8 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 7.0E-16 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS18640 0b5b6a5d019d858c4626b9845da46df8 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS18640 0b5b6a5d019d858c4626b9845da46df8 44 PANTHER PTHR14503 1 43 1.0E-18 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS18640 0b5b6a5d019d858c4626b9845da46df8 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.76 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS18640 0b5b6a5d019d858c4626b9845da46df8 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 4.0E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03610 24ffaafccf6612ca94288467143ec029 187 SUPERFAMILY SSF101874 20 187 6.67E-42 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS03610 24ffaafccf6612ca94288467143ec029 187 PANTHER PTHR34406:SF1 1 187 6.9E-30 T 22-04-2016 RPIC_RS03610 24ffaafccf6612ca94288467143ec029 187 SMART SM00867 20 185 2.7E-43 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS03610 24ffaafccf6612ca94288467143ec029 187 PANTHER PTHR34406 1 187 6.9E-30 T 22-04-2016 RPIC_RS03610 24ffaafccf6612ca94288467143ec029 187 Pfam PF04264 YceI-like domain 24 184 1.7E-32 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS03610 24ffaafccf6612ca94288467143ec029 187 Gene3D G3DSA:2.40.128.110 19 186 4.0E-42 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 Pfam PF00361 Proton-conducting membrane transporter 142 425 1.4E-86 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 680 4.5E-243 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 119 139 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 91 116 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 166 187 4.2E-66 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PANTHER PTHR22773:SF50 1 633 4.0E-256 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 67 91 3.9E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 93 113 3.9E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 433 455 3.9E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 3.9E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 494 515 3.9E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 PANTHER PTHR22773 1 633 4.0E-256 T 22-04-2016 RPIC_RS10830 a8b204efbcb5a630da1711daf9036e78 686 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 74 130 1.0E-25 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RPIC_RS11165 5a607b7b4bb93069580b37c696f3f6a7 161 SUPERFAMILY SSF54106 109 159 2.88E-8 T 22-04-2016 IPR018392 LysM domain RPIC_RS11165 5a607b7b4bb93069580b37c696f3f6a7 161 SMART SM00257 110 159 2.0E-13 T 22-04-2016 IPR018392 LysM domain RPIC_RS11165 5a607b7b4bb93069580b37c696f3f6a7 161 PANTHER PTHR34700 88 159 1.7E-25 T 22-04-2016 RPIC_RS11165 5a607b7b4bb93069580b37c696f3f6a7 161 Pfam PF01476 LysM domain 111 159 1.6E-11 T 22-04-2016 IPR018392 LysM domain RPIC_RS11165 5a607b7b4bb93069580b37c696f3f6a7 161 Gene3D G3DSA:3.10.350.10 109 160 7.1E-12 T 22-04-2016 IPR018392 LysM domain RPIC_RS11165 5a607b7b4bb93069580b37c696f3f6a7 161 Pfam PF04972 BON domain 41 102 2.1E-9 T 22-04-2016 IPR007055 BON domain RPIC_RS10380 338807407ad896ca87c2af1d59729cb0 129 Pfam PF08859 DGC domain 8 110 1.1E-31 T 22-04-2016 IPR014958 DGC RPIC_RS10380 338807407ad896ca87c2af1d59729cb0 129 PIRSF PIRSF037181 1 129 3.5E-51 T 22-04-2016 IPR014958 DGC RPIC_RS05025 136a666a3039691792ed55b523a52d5f 350 SUPERFAMILY SSF161098 111 327 5.36E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05025 136a666a3039691792ed55b523a52d5f 350 PANTHER PTHR30465 1 345 4.4E-170 T 22-04-2016 RPIC_RS05025 136a666a3039691792ed55b523a52d5f 350 Gene3D G3DSA:1.10.3720.10 113 333 1.2E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05025 136a666a3039691792ed55b523a52d5f 350 PANTHER PTHR30465:SF66 1 345 4.4E-170 T 22-04-2016 RPIC_RS05025 136a666a3039691792ed55b523a52d5f 350 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 135 343 2.2E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Pfam PF05190 MutS family domain IV 444 535 3.9E-31 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Gene3D G3DSA:1.10.1420.10 336 493 1.0E-48 T 22-04-2016 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 21 870 24.93 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 21 875 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Gene3D G3DSA:3.40.1170.10 19 134 3.5E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Pfam PF05188 MutS domain II 142 268 1.3E-17 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 SMART SM00533 300 607 2.6E-92 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 PANTHER PTHR11361:SF86 20 876 0.0 T 22-04-2016 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 PANTHER PTHR11361 20 876 0.0 T 22-04-2016 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Gene3D G3DSA:3.40.50.300 584 813 1.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 SUPERFAMILY SSF53150 131 297 4.19E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Pfam PF00488 MutS domain V 626 811 3.5E-82 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Pfam PF01624 MutS domain I 22 133 1.4E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Pfam PF05192 MutS domain III 286 575 2.2E-36 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 703 719 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 SUPERFAMILY SSF48334 284 580 8.11E-85 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 Gene3D G3DSA:3.30.420.110 141 272 3.8E-32 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 SUPERFAMILY SSF52540 583 813 9.26E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 SMART SM00534 622 809 9.2E-114 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 SUPERFAMILY SSF55271 18 129 2.49E-43 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS04910 4ea10ee05396ece14bc9ca744a8aa011 882 PIRSF PIRSF037677 11 830 3.7E-149 T 22-04-2016 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 PIRSF PIRSF000171 1 524 3.7E-31 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 Gene3D G3DSA:3.50.50.60 340 399 3.9E-102 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 Gene3D G3DSA:3.50.50.60 2 234 3.9E-102 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.4E-7 T 22-04-2016 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.4E-7 T 22-04-2016 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 Pfam PF00890 FAD binding domain 4 383 1.7E-104 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 PANTHER PTHR11632 2 528 2.2E-256 T 22-04-2016 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 SUPERFAMILY SSF46977 416 517 1.96E-30 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 Pfam PF02910 Fumarate reductase flavoprotein C-term 432 512 2.4E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 Gene3D G3DSA:1.20.58.100 406 513 1.2E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 SUPERFAMILY SSF51905 2 246 1.71E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 SUPERFAMILY SSF51905 347 439 1.71E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 PANTHER PTHR11632:SF27 2 528 2.2E-256 T 22-04-2016 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 2 511 1.6E-202 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 SUPERFAMILY SSF56425 229 344 8.52E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC_RS13375 4394de931fa9745c4816b86ed6ad74e0 533 Gene3D G3DSA:3.90.700.10 235 339 6.7E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 SUPERFAMILY SSF54211 3 124 7.59E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 8.1E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 Gene3D G3DSA:3.30.230.20 3 125 1.8E-45 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 PANTHER PTHR33694 1 299 3.5E-133 T 22-04-2016 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 50.589 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 295 7.2E-124 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 Gene3D G3DSA:3.30.1700.10 128 282 6.4E-59 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 PANTHER PTHR33694:SF1 1 299 3.5E-133 T 22-04-2016 RPIC_RS15190 10748e7e7e342907a177085df44bb2e6 305 SUPERFAMILY SSF54211 133 277 5.69E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS14635 8818ddbbb6272bd8e7618836b4cd1198 486 PANTHER PTHR10160:SF24 3 485 6.9E-219 T 22-04-2016 RPIC_RS14635 8818ddbbb6272bd8e7618836b4cd1198 486 PANTHER PTHR10160 3 485 6.9E-219 T 22-04-2016 RPIC_RS14635 8818ddbbb6272bd8e7618836b4cd1198 486 PIRSF PIRSF000204 1 486 4.7E-209 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RPIC_RS14635 8818ddbbb6272bd8e7618836b4cd1198 486 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 483 1.3E-185 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 RPIC_RS14635 8818ddbbb6272bd8e7618836b4cd1198 486 SUPERFAMILY SSF52467 314 485 6.54E-74 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS14635 8818ddbbb6272bd8e7618836b4cd1198 486 Gene3D G3DSA:3.40.50.1220 311 485 1.1E-85 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS10815 13b8eeb546dee782305badf013b1420e 104 PIRSF PIRSF019883 1 102 2.6E-47 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RPIC_RS10815 13b8eeb546dee782305badf013b1420e 104 Pfam PF10993 Protein of unknown function (DUF2818) 8 98 5.8E-37 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 Gene3D G3DSA:3.40.50.1000 9 26 5.4E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 Gene3D G3DSA:3.40.50.1000 90 223 5.4E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 192 2.0E-29 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 13 223 2.4E-52 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 Gene3D G3DSA:1.10.150.240 27 89 1.1E-6 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 SUPERFAMILY SSF56784 12 223 1.2E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 PANTHER PTHR18901 12 223 5.2E-85 T 22-04-2016 RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 187 6.6E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS03755 19f93659837fef0966b2ef8fafcd195d 229 PANTHER PTHR18901:SF24 12 223 5.2E-85 T 22-04-2016 RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 Gene3D G3DSA:1.10.150.130 111 196 8.9E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 Gene3D G3DSA:1.10.443.10 221 385 2.1E-12 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 Pfam PF13356 Domain of unknown function (DUF4102) 9 91 7.2E-14 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 Pfam PF00589 Phage integrase family 229 366 1.5E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 PANTHER PTHR30629:SF2 3 394 8.8E-52 T 22-04-2016 RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 SUPERFAMILY SSF56349 107 388 8.63E-39 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS11255 7c200c1f987c822ae2e70ae1b3c34e6a 417 PANTHER PTHR30629 3 394 8.8E-52 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 SUPERFAMILY SSF64484 347 945 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 SUPERFAMILY SSF64484 1058 1366 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 SUPERFAMILY SSF64484 12 229 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF00562 RNA polymerase Rpb2, domain 6 724 1290 1.1E-158 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:2.40.270.10 1079 1268 7.9E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:2.40.270.10 799 826 7.9E-87 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1364 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF10385 RNA polymerase beta subunit external 1 domain 595 662 3.3E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1368 12.247 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF04563 RNA polymerase beta subunit 27 504 2.1E-35 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856 1053 1147 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856 1198 1368 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856 5 233 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856 344 731 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856 749 936 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF04560 RNA polymerase Rpb2, domain 7 1292 1366 1.6E-26 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:3.90.1100.10 449 595 1.1E-144 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:3.90.1100.10 665 719 1.1E-144 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:3.90.1100.10 21 154 1.1E-144 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856:SF20 1053 1147 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856:SF20 1198 1368 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856:SF20 5 233 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856:SF20 344 731 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 PANTHER PTHR20856:SF20 749 936 0.0 T 22-04-2016 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:2.30.150.10 596 662 3.8E-25 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 351 458 1.9E-15 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 226 9.4E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:2.40.50.150 834 943 1.1E-56 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:2.40.50.150 1064 1078 1.1E-56 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:3.90.1110.10 350 448 3.6E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:3.90.1110.10 156 233 3.6E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Pfam PF04565 RNA polymerase Rpb2, domain 3 517 584 3.4E-31 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16365 1dd6d1459cb4532fe95abec3e7c5e5d8 1368 Gene3D G3DSA:2.40.50.100 721 798 2.1E-28 T 22-04-2016 RPIC_RS02115 fa7e6718cba62edd06796107e0a8f402 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 79 6.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS02115 fa7e6718cba62edd06796107e0a8f402 222 SUPERFAMILY SSF46689 24 102 1.23E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS02115 fa7e6718cba62edd06796107e0a8f402 222 Gene3D G3DSA:1.10.357.10 29 214 2.2E-26 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS02115 fa7e6718cba62edd06796107e0a8f402 222 PANTHER PTHR30055 17 219 6.0E-19 T 22-04-2016 RPIC_RS02115 fa7e6718cba62edd06796107e0a8f402 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 46 77 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC_RS13365 7a49ee5295cf3d72689c6e81916bde0a 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.6E-28 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13365 7a49ee5295cf3d72689c6e81916bde0a 77 Gene3D G3DSA:2.30.170.40 2 76 3.4E-37 T 22-04-2016 RPIC_RS13365 7a49ee5295cf3d72689c6e81916bde0a 77 PANTHER PTHR13528 1 68 1.9E-34 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RPIC_RS13365 7a49ee5295cf3d72689c6e81916bde0a 77 SUPERFAMILY SSF143800 1 76 7.26E-31 T 22-04-2016 RPIC_RS13365 7a49ee5295cf3d72689c6e81916bde0a 77 Pfam PF00830 Ribosomal L28 family 3 62 6.3E-28 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 RPIC_RS13365 7a49ee5295cf3d72689c6e81916bde0a 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.439 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PANTHER PTHR30023 20 507 1.6E-68 T 22-04-2016 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 87 488 1.1E-63 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 Gene3D G3DSA:3.40.710.10 77 115 4.5E-4 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PANTHER PTHR30023:SF0 20 507 1.6E-68 T 22-04-2016 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 SUPERFAMILY SSF56601 56 509 1.32E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 Gene3D G3DSA:3.40.710.10 271 508 4.8E-68 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 61 505 8.0E-84 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 404 418 7.1E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 389 403 7.1E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 331 353 7.1E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 466 479 7.1E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS02455 009e458a8b9a28edac3ee80786bece6d 512 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 99 118 7.1E-23 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Gene3D G3DSA:1.20.58.100 450 559 1.4E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 PANTHER PTHR11632 1 587 0.0 T 22-04-2016 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 592 2.6E-281 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 SUPERFAMILY SSF46977 456 592 2.09E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 SUPERFAMILY SSF51905 363 432 1.34E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 SUPERFAMILY SSF51905 9 264 1.34E-78 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Pfam PF02910 Fumarate reductase flavoprotein C-term 466 591 2.9E-40 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 591 6.2E-240 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Gene3D G3DSA:4.10.80.40 560 592 3.8E-23 T 22-04-2016 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Gene3D G3DSA:3.50.50.60 10 247 1.1E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Gene3D G3DSA:3.50.50.60 355 430 1.1E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 PANTHER PTHR11632:SF5 1 587 0.0 T 22-04-2016 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 SUPERFAMILY SSF56425 241 359 5.53E-44 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Gene3D G3DSA:3.90.700.10 248 354 1.2E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 Pfam PF00890 FAD binding domain 14 409 1.2E-116 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 PIRSF PIRSF000171 3 579 7.2E-42 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 4.2E-6 T 22-04-2016 RPIC_RS10565 f54f7da7818ef5d31e4e364d3d99390e 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 394 4.2E-6 T 22-04-2016 RPIC_RS14850 925b664a624ca9ca621fd7dea69e3bb3 192 SUPERFAMILY SSF101307 36 190 3.14E-33 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RPIC_RS14850 925b664a624ca9ca621fd7dea69e3bb3 192 Pfam PF04608 Phosphatidylglycerophosphatase A 43 189 9.0E-46 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 RPIC_RS14850 925b664a624ca9ca621fd7dea69e3bb3 192 PANTHER PTHR36305 28 192 1.4E-44 T 22-04-2016 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 PANTHER PTHR30328 11 228 1.1E-52 T 22-04-2016 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 49 1.5E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 80 1.5E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 SUPERFAMILY SSF48498 103 227 1.05E-34 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 SUPERFAMILY SSF46689 23 106 8.72E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 Gene3D G3DSA:1.10.357.10 83 224 2.3E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 Gene3D G3DSA:1.10.10.60 22 82 1.5E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 PANTHER PTHR30328:SF16 11 228 1.1E-52 T 22-04-2016 RPIC_RS04290 12c563d0802d45e0cc10fbcb862f08fb 231 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 80 4.4E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 56 146 8.5E-20 T 22-04-2016 IPR032093 Phospholipase D, N-terminal RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 Pfam PF09423 PhoD-like phosphatase 165 479 2.3E-83 T 22-04-2016 IPR018946 Alkaline phosphatase D-related RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 SUPERFAMILY SSF56300 152 535 5.87E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 PANTHER PTHR22953:SF40 34 206 2.5E-123 T 22-04-2016 RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 PANTHER PTHR22953:SF40 235 437 2.5E-123 T 22-04-2016 RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 PANTHER PTHR22953 34 206 2.5E-123 T 22-04-2016 RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 PANTHER PTHR22953 235 437 2.5E-123 T 22-04-2016 RPIC_RS03910 559ba29f181e7ccea318d7d9b1e75348 539 Gene3D G3DSA:3.60.21.10 150 537 8.8E-28 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 3.6E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 3.6E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 3.6E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 3.6E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 3.6E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 3.6E-45 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 Gene3D G3DSA:3.90.380.10 149 447 9.1E-87 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 SUPERFAMILY SSF50022 18 170 8.64E-45 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 395 4.3E-19 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 SUPERFAMILY SSF55961 171 446 2.35E-65 T 22-04-2016 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PANTHER PTHR21266:SF30 21 382 5.4E-113 T 22-04-2016 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 PANTHER PTHR21266 21 382 5.4E-113 T 22-04-2016 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 6.2E-22 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS06770 fda9033dcae8baa4073178d802cfeb1e 452 Gene3D G3DSA:2.102.10.10 52 142 1.1E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 PANTHER PTHR18919:SF5 5 435 1.2E-175 T 22-04-2016 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 SUPERFAMILY SSF53901 10 286 6.79E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 Gene3D G3DSA:3.40.47.10 301 433 1.7E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 Gene3D G3DSA:3.40.47.10 170 216 1.7E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 PANTHER PTHR18919 5 435 1.2E-175 T 22-04-2016 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 12 432 4.8E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 Pfam PF00108 Thiolase, N-terminal domain 10 279 5.0E-51 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 Gene3D G3DSA:3.40.47.10 217 291 1.4E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 Gene3D G3DSA:3.40.47.10 10 129 1.4E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 Pfam PF02803 Thiolase, C-terminal domain 299 433 5.0E-32 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 SUPERFAMILY SSF53901 310 433 7.63E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02035 5a40333b11685a5358f93e04b1b6b595 439 PIRSF PIRSF000429 5 435 4.4E-106 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS06235 d583dd912652943a562a7a3f484decbb 299 PANTHER PTHR30465 13 298 4.3E-194 T 22-04-2016 RPIC_RS06235 d583dd912652943a562a7a3f484decbb 299 PANTHER PTHR30465:SF57 13 298 4.3E-194 T 22-04-2016 RPIC_RS06235 d583dd912652943a562a7a3f484decbb 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 73 1.8E-13 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIC_RS06235 d583dd912652943a562a7a3f484decbb 299 SUPERFAMILY SSF161098 91 281 4.97E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06235 d583dd912652943a562a7a3f484decbb 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 297 1.9E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06235 d583dd912652943a562a7a3f484decbb 299 Gene3D G3DSA:1.10.3720.10 87 294 3.4E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS04770 49878d1312c22fa15a046401708db784 281 PANTHER PTHR33490 4 271 1.4E-57 T 22-04-2016 RPIC_RS04770 49878d1312c22fa15a046401708db784 281 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 1.5E-20 T 22-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal RPIC_RS04770 49878d1312c22fa15a046401708db784 281 PANTHER PTHR33490:SF5 4 271 1.4E-57 T 22-04-2016 RPIC_RS04770 49878d1312c22fa15a046401708db784 281 SMART SM00460 164 229 3.8E-11 T 22-04-2016 IPR002931 Transglutaminase-like RPIC_RS04770 49878d1312c22fa15a046401708db784 281 Gene3D G3DSA:3.90.260.10 169 268 5.9E-10 T 22-04-2016 IPR002931 Transglutaminase-like RPIC_RS04770 49878d1312c22fa15a046401708db784 281 SUPERFAMILY SSF54001 102 274 2.1E-37 T 22-04-2016 RPIC_RS04770 49878d1312c22fa15a046401708db784 281 Pfam PF01841 Transglutaminase-like superfamily 128 226 3.6E-20 T 22-04-2016 IPR002931 Transglutaminase-like RPIC_RS04535 cb6e396b31b16398ba243c837d7b3f2c 365 Pfam PF03888 MucB/RseB N-terminal domain 48 223 1.0E-53 T 22-04-2016 IPR033434 MucB/RseB, N-terminal RPIC_RS04535 cb6e396b31b16398ba243c837d7b3f2c 365 PANTHER PTHR38782:SF1 17 353 1.1E-36 T 22-04-2016 RPIC_RS04535 cb6e396b31b16398ba243c837d7b3f2c 365 Pfam PF17188 MucB/RseB C-terminal domain 244 347 4.7E-27 T 22-04-2016 IPR033436 MucB/RseB, C-terminal RPIC_RS04535 cb6e396b31b16398ba243c837d7b3f2c 365 PIRSF PIRSF005427 13 354 8.6E-107 T 22-04-2016 IPR005588 MucB/RseB RPIC_RS04535 cb6e396b31b16398ba243c837d7b3f2c 365 PANTHER PTHR38782 17 353 1.1E-36 T 22-04-2016 RPIC_RS04535 cb6e396b31b16398ba243c837d7b3f2c 365 Gene3D G3DSA:2.50.20.10 141 211 5.3E-6 T 22-04-2016 RPIC_RS02335 7fa3f522c55d576b1714fc81282c1366 231 Pfam PF03741 Integral membrane protein TerC family 15 189 1.3E-44 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RPIC_RS02335 7fa3f522c55d576b1714fc81282c1366 231 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 190 6.3E-69 T 22-04-2016 IPR022301 Integral membrane protein YjbE RPIC_RS02335 7fa3f522c55d576b1714fc81282c1366 231 PANTHER PTHR30060 1 191 8.0E-36 T 22-04-2016 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 SMART SM00283 271 518 2.0E-82 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 Gene3D G3DSA:1.10.287.950 286 490 1.4E-57 T 22-04-2016 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 SUPERFAMILY SSF47170 32 179 1.7E-11 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.0E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 8 33 1.0E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.0E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 1.0E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 446 475 1.0E-55 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 Pfam PF02203 Tar ligand binding domain homologue 5 170 9.6E-18 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PANTHER PTHR32089 132 521 6.6E-148 T 22-04-2016 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 SUPERFAMILY SSF58104 238 519 2.49E-70 T 22-04-2016 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 PANTHER PTHR32089:SF63 132 521 6.6E-148 T 22-04-2016 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 SMART SM00304 218 270 1.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 517 9.8E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 Pfam PF00672 HAMP domain 200 266 1.2E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS04925 5cc982cbbeeb48cf2cd3dd313ac30685 601 Gene3D G3DSA:1.20.120.30 43 179 3.0E-6 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 RPIC_RS01725 71df5f5e434eb60ddfc846eeb3bbe9ae 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 251 1.3E-52 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS01725 71df5f5e434eb60ddfc846eeb3bbe9ae 254 PANTHER PTHR11941 3 250 2.9E-85 T 22-04-2016 RPIC_RS01725 71df5f5e434eb60ddfc846eeb3bbe9ae 254 PANTHER PTHR11941:SF17 3 250 2.9E-85 T 22-04-2016 RPIC_RS01725 71df5f5e434eb60ddfc846eeb3bbe9ae 254 SUPERFAMILY SSF52096 3 252 1.23E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01725 71df5f5e434eb60ddfc846eeb3bbe9ae 254 Gene3D G3DSA:3.90.226.10 2 250 6.3E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 PIRSF PIRSF000429 1 400 8.0E-132 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 5.4E-137 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 PANTHER PTHR18919 1 400 2.8E-237 T 22-04-2016 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 4.5E-46 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 SUPERFAMILY SSF53901 276 399 7.98E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 2.1E-224 T 22-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 Gene3D G3DSA:3.40.47.10 282 399 1.0E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 Gene3D G3DSA:3.40.47.10 154 199 1.0E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 PANTHER PTHR18919:SF91 1 400 2.8E-237 T 22-04-2016 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 SUPERFAMILY SSF53901 4 275 1.76E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 Gene3D G3DSA:3.40.47.10 200 281 8.5E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 Gene3D G3DSA:3.40.47.10 4 125 8.5E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 Pfam PF00108 Thiolase, N-terminal domain 5 267 4.8E-73 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC_RS12115 40a8ebc9849d91153bcd41f34bd582f2 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC_RS00090 db573ff75147db08ccc1fc504bdb8e9c 318 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 293 7.0E-67 T 22-04-2016 IPR021134 Bestrophin/UPF0187 RPIC_RS00090 db573ff75147db08ccc1fc504bdb8e9c 318 PANTHER PTHR33281 1 308 2.2E-74 T 22-04-2016 RPIC_RS00090 db573ff75147db08ccc1fc504bdb8e9c 318 PANTHER PTHR33281:SF3 1 308 2.2E-74 T 22-04-2016 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 SMART SM00387 346 458 1.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 SMART SM00388 237 303 4.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 5.4E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PANTHER PTHR24423:SF354 177 456 1.8E-100 T 22-04-2016 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PANTHER PTHR24423:SF354 22 27 1.8E-100 T 22-04-2016 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 Pfam PF00672 HAMP domain 164 232 1.9E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 455 4.0E-138 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 8.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 SMART SM00304 183 236 8.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 Gene3D G3DSA:1.10.287.130 227 299 1.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 Gene3D G3DSA:3.30.565.10 309 456 3.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 SUPERFAMILY SSF47384 220 302 6.28E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 4.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PANTHER PTHR24423 177 456 1.8E-100 T 22-04-2016 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 PANTHER PTHR24423 22 27 1.8E-100 T 22-04-2016 RPIC_RS08425 17fce14b6f1e147e3b615570a6b4d948 465 SUPERFAMILY SSF55874 292 456 1.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS22170 f43abfeef8967308c4762e636808925f 243 PANTHER PTHR30451 25 243 5.0E-62 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS22170 f43abfeef8967308c4762e636808925f 243 PANTHER PTHR30451:SF2 25 243 5.0E-62 T 22-04-2016 RPIC_RS22170 f43abfeef8967308c4762e636808925f 243 SUPERFAMILY SSF141729 81 195 8.11E-37 T 22-04-2016 RPIC_RS22170 f43abfeef8967308c4762e636808925f 243 Pfam PF13954 PapC N-terminal domain 60 204 5.3E-47 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 Gene3D G3DSA:3.60.20.10 7 178 8.3E-82 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 Pfam PF00227 Proteasome subunit 5 176 4.1E-23 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 40.51 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 2.1E-82 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 SUPERFAMILY SSF56235 3 177 5.09E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 PANTHER PTHR32194 1 178 8.3E-117 T 22-04-2016 RPIC_RS18390 28c8ef7e6c2b8e7715f3fb101f3c16f3 178 PIRSF PIRSF039093 1 178 1.6E-84 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 Gene3D G3DSA:3.40.570.10 42 251 3.5E-54 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 SMART SM00892 50 242 1.0E-37 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 115 123 - T 22-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 SMART SM00477 51 242 1.5E-26 T 22-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 PANTHER PTHR13966 46 214 7.5E-30 T 22-04-2016 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 Pfam PF01223 DNA/RNA non-specific endonuclease 43 241 4.7E-40 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 RPIC_RS07700 cbd78926e30e8ecdae0630d77b07a41f 305 SUPERFAMILY SSF54060 46 257 1.35E-55 T 22-04-2016 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 ProSitePatterns PS00455 Putative AMP-binding domain signature. 280 291 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 Pfam PF00501 AMP-binding enzyme 111 537 2.5E-45 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 PANTHER PTHR24095 9 659 8.5E-269 T 22-04-2016 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 46 99 5.6E-10 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 9 660 8.4E-235 T 22-04-2016 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 Gene3D G3DSA:3.40.50.980 100 285 8.5E-29 T 22-04-2016 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 SUPERFAMILY SSF56801 39 656 3.66E-120 T 22-04-2016 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 Gene3D G3DSA:3.30.300.30 536 636 2.8E-11 T 22-04-2016 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 Gene3D G3DSA:3.40.50.980 286 421 1.2E-13 T 22-04-2016 RPIC_RS03200 70efd852296e67d72df8fa701db4de38 684 PANTHER PTHR24095:SF46 9 659 8.5E-269 T 22-04-2016 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 3.8E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 PANTHER PTHR24423:SF554 65 429 1.5E-110 T 22-04-2016 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 SUPERFAMILY SSF55785 92 162 3.43E-7 T 22-04-2016 IPR000014 PAS domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 SMART SM00091 98 164 0.0018 T 22-04-2016 IPR000014 PAS domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Gene3D G3DSA:1.10.287.130 198 257 2.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Gene3D G3DSA:3.30.450.20 93 197 1.2E-12 T 22-04-2016 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Pfam PF11808 Domain of unknown function (DUF3329) 5 89 1.6E-15 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 427 7.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Gene3D G3DSA:3.30.565.10 258 425 9.4E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 PANTHER PTHR24423 65 429 1.5E-110 T 22-04-2016 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Pfam PF13188 PAS domain 99 154 1.0E-6 T 22-04-2016 IPR000014 PAS domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 SMART SM00387 316 428 4.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 SUPERFAMILY SSF55874 261 425 2.49E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 3.9E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 SMART SM00388 206 272 5.1E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 2.6E-134 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 RPIC_RS09945 86aef671cc1151b0285b2d83573c0df8 442 SUPERFAMILY SSF47384 194 271 3.73E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 SUPERFAMILY SSF46894 135 211 3.23E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 Pfam PF00072 Response regulator receiver domain 12 122 2.5E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 SUPERFAMILY SSF52172 8 135 9.39E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 Gene3D G3DSA:3.40.50.2300 8 150 1.5E-35 T 22-04-2016 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 PANTHER PTHR26402 9 209 8.8E-67 T 22-04-2016 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.4E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 SMART SM00448 9 122 3.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 Gene3D G3DSA:1.10.10.10 151 211 5.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 SMART SM00421 150 207 6.3E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS18500 2807f3c4f46644a1da94b90a5a27d972 214 PANTHER PTHR26402:SF151 9 209 8.8E-67 T 22-04-2016 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 Gene3D G3DSA:1.10.45.10 430 469 1.0E-14 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 Pfam PF01565 FAD binding domain 42 179 2.0E-36 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 PANTHER PTHR11748:SF76 1 470 5.5E-191 T 22-04-2016 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 Gene3D G3DSA:3.30.465.10 98 219 2.0E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 SUPERFAMILY SSF55103 222 470 1.03E-56 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 Gene3D G3DSA:3.30.43.10 3 97 3.1E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 PANTHER PTHR11748 1 470 5.5E-191 T 22-04-2016 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 SUPERFAMILY SSF56176 4 219 3.0E-76 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS09825 3832722edda7e14821fba4ef561a6613 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 469 3.6E-49 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC_RS03115 dc1190f1637b78b6ab2bc1271c9bb9c3 294 Gene3D G3DSA:3.90.550.10 2 264 5.2E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS03115 dc1190f1637b78b6ab2bc1271c9bb9c3 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 3.1E-157 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RPIC_RS03115 dc1190f1637b78b6ab2bc1271c9bb9c3 294 SUPERFAMILY SSF53448 2 288 2.48E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS03115 dc1190f1637b78b6ab2bc1271c9bb9c3 294 PANTHER PTHR22572 4 271 3.7E-180 T 22-04-2016 RPIC_RS03115 dc1190f1637b78b6ab2bc1271c9bb9c3 294 Pfam PF00483 Nucleotidyl transferase 4 240 3.9E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RPIC_RS03115 dc1190f1637b78b6ab2bc1271c9bb9c3 294 PANTHER PTHR22572:SF105 4 271 3.7E-180 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RPIC_RS13750 8d8bb56de6f9a4a1e16323cd8972338c 250 PANTHER PTHR14097:SF7 17 249 9.6E-62 T 22-04-2016 RPIC_RS13750 8d8bb56de6f9a4a1e16323cd8972338c 250 Pfam PF13460 NAD(P)H-binding 31 148 1.1E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13750 8d8bb56de6f9a4a1e16323cd8972338c 250 PANTHER PTHR14097 17 249 9.6E-62 T 22-04-2016 RPIC_RS13750 8d8bb56de6f9a4a1e16323cd8972338c 250 SUPERFAMILY SSF51735 24 231 8.36E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13750 8d8bb56de6f9a4a1e16323cd8972338c 250 Gene3D G3DSA:3.40.50.720 24 240 3.4E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11115 f76d366832f9715398d5d80c763ff13f 469 PANTHER PTHR11119:SF3 15 455 2.5E-118 T 22-04-2016 RPIC_RS11115 f76d366832f9715398d5d80c763ff13f 469 Pfam PF00860 Permease family 23 415 1.5E-103 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS11115 f76d366832f9715398d5d80c763ff13f 469 TIGRFAM TIGR03173 pbuX: xanthine permease 26 448 4.4E-163 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RPIC_RS11115 f76d366832f9715398d5d80c763ff13f 469 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RPIC_RS11115 f76d366832f9715398d5d80c763ff13f 469 PANTHER PTHR11119 15 455 2.5E-118 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS11115 f76d366832f9715398d5d80c763ff13f 469 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 446 2.5E-122 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 SUPERFAMILY SSF52096 39 270 8.96E-54 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 PANTHER PTHR22855:SF29 15 539 1.6E-285 T 22-04-2016 RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 Gene3D G3DSA:3.90.226.10 280 526 4.4E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 Gene3D G3DSA:3.90.226.10 39 271 7.6E-51 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 SUPERFAMILY SSF52096 238 518 1.32E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 Pfam PF01039 Carboxyl transferase domain 49 526 3.2E-109 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS00505 07cf839b0dde29e101ae5daaff4d0342 539 PANTHER PTHR22855 15 539 1.6E-285 T 22-04-2016 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.366.10 731 844 8.7E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.366.10 535 661 8.7E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF00107 Zinc-binding dehydrogenase 1952 2047 9.5E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF51735 2147 2350 5.21E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM00825 Beta-ketoacyl synthase 5 431 3.6E-214 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 165 181 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF14765 Polyketide synthase dehydratase 904 1178 4.3E-54 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.90.180.10 1806 1947 2.9E-42 T 22-04-2016 IPR011032 GroES-like RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF00550 Phosphopantetheine attachment site 2429 2493 2.7E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.47.10 2 264 1.4E-99 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 378 8.2E-38 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 1941 1962 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF51735 1913 2071 1.8E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF50129 1803 1950 2.52E-26 T 22-04-2016 IPR011032 GroES-like RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.30.70.250 664 721 2.6E-4 T 22-04-2016 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF52151 538 667 3.66E-59 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF52151 733 827 3.66E-59 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF51735 1582 1779 4.33E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM00826 904 1065 3.9E-31 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 PANTHER PTHR11712 1283 2499 0.0 T 22-04-2016 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 PANTHER PTHR11712 2 1200 0.0 T 22-04-2016 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF08659 KR domain 2146 2326 6.1E-59 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2453 2468 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF53335 1452 1539 6.72E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM00823 Phosphopantetheine attachment site 2427 2498 8.8E-14 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM01294 2428 2494 1.3E-4 T 22-04-2016 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 252 3.2E-90 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.50.720 1948 2039 6.6E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF00698 Acyl transferase domain 542 847 2.3E-62 T 22-04-2016 IPR014043 Acyl transferase RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.50.150 1434 1535 5.0E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF53901 405 427 1.23E-97 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF53901 3 371 1.23E-97 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 381 498 7.3E-21 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2146 2327 1.6E-52 T 22-04-2016 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.50.720 2148 2324 4.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF55048 665 731 4.84E-10 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM00829 1808 2123 1.0E-176 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:1.10.1200.10 2425 2497 5.4E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 542 841 2.0E-82 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 SUPERFAMILY SSF47336 2424 2508 4.32E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS05690 eb1463536d0cf1d11297adb1a477c98f 2556 Gene3D G3DSA:3.40.47.10 266 431 9.7E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 PANTHER PTHR22888:SF13 19 265 2.4E-140 T 22-04-2016 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 Gene3D G3DSA:1.10.287.90 27 112 4.4E-36 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 Gene3D G3DSA:2.60.40.420 113 278 1.8E-40 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 Pfam PF06481 COX Aromatic Rich Motif 237 282 6.8E-17 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 PANTHER PTHR22888 19 265 2.4E-140 T 22-04-2016 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 SUPERFAMILY SSF49503 118 279 3.98E-49 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 SUPERFAMILY SSF81464 18 116 7.52E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 PIRSF PIRSF000292 1 308 9.3E-133 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 16 237 2.4E-115 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC_RS15610 f7776bbec9084fa4ab2c6fae473c2cfd 328 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 147 218 6.1E-7 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RPIC_RS03280 85536c26f23514894a54c1494c8c08f7 167 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 11 153 7.4E-25 T 22-04-2016 IPR013362 Pilus modification type IV, PilV RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 PANTHER PTHR13847:SF148 1 67 1.3E-72 T 22-04-2016 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 PANTHER PTHR13847:SF148 107 414 1.3E-72 T 22-04-2016 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 PANTHER PTHR13847 1 67 1.3E-72 T 22-04-2016 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 PANTHER PTHR13847 107 414 1.3E-72 T 22-04-2016 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 SUPERFAMILY SSF54373 273 367 3.14E-11 T 22-04-2016 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 418 51.927 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Pfam PF01266 FAD dependent oxidoreductase 3 405 1.3E-57 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Gene3D G3DSA:3.50.50.60 191 272 4.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Gene3D G3DSA:3.50.50.60 367 420 4.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Gene3D G3DSA:3.50.50.60 108 122 4.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Gene3D G3DSA:3.50.50.60 1 55 4.6E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 SUPERFAMILY SSF51905 1 54 2.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 SUPERFAMILY SSF51905 107 273 2.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 SUPERFAMILY SSF51905 367 418 2.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Gene3D G3DSA:3.30.9.10 136 190 1.1E-9 T 22-04-2016 RPIC_RS12165 5847569d8305a00e9c5c1aee91de38ca 422 Gene3D G3DSA:3.30.9.10 273 349 1.1E-9 T 22-04-2016 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.598 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 PANTHER PTHR30437 1 157 1.1E-61 T 22-04-2016 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 SUPERFAMILY SSF54534 83 157 3.66E-23 T 22-04-2016 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 PIRSF PIRSF006092 1 158 1.1E-52 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 SUPERFAMILY SSF46557 3 77 2.49E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 7.7E-56 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 Gene3D G3DSA:1.10.287.180 1 75 1.2E-33 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 Gene3D G3DSA:3.10.50.30 81 157 1.7E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 4.1E-31 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC_RS10010 17c6dc3442b4c005e63ae4af4157a0ec 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 9.1E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 Gene3D G3DSA:3.40.50.2000 316 482 3.6E-17 T 22-04-2016 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 Pfam PF11997 Domain of unknown function (DUF3492) 12 292 1.4E-106 T 22-04-2016 IPR022622 Domain of unknown function DUF3492 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 PANTHER PTHR12526 159 232 8.8E-35 T 22-04-2016 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 PANTHER PTHR12526 248 504 8.8E-35 T 22-04-2016 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 SUPERFAMILY SSF53756 160 220 1.88E-55 T 22-04-2016 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 SUPERFAMILY SSF53756 248 503 1.88E-55 T 22-04-2016 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 SUPERFAMILY SSF53756 15 74 1.88E-55 T 22-04-2016 RPIC_RS12175 3c95b77c61a501a1f7e8363059120236 537 Pfam PF00534 Glycosyl transferases group 1 317 472 1.9E-21 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS04685 dc59e5eba1c7445fea5377971c1528a8 396 SUPERFAMILY SSF56935 33 396 3.36E-82 T 22-04-2016 RPIC_RS04685 dc59e5eba1c7445fea5377971c1528a8 396 Pfam PF13609 Gram-negative porin 19 354 2.1E-40 T 22-04-2016 RPIC_RS04685 dc59e5eba1c7445fea5377971c1528a8 396 Gene3D G3DSA:2.40.160.10 33 396 3.8E-94 T 22-04-2016 IPR023614 Porin domain RPIC_RS04685 dc59e5eba1c7445fea5377971c1528a8 396 PRINTS PR00184 Neisseria sp. porin signature 65 90 9.4E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS04685 dc59e5eba1c7445fea5377971c1528a8 396 PRINTS PR00184 Neisseria sp. porin signature 167 184 9.4E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS04685 dc59e5eba1c7445fea5377971c1528a8 396 PRINTS PR00184 Neisseria sp. porin signature 327 351 9.4E-10 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 Gene3D G3DSA:3.40.50.1010 114 174 2.4E-9 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 Gene3D G3DSA:3.40.50.1010 212 268 2.4E-9 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 PANTHER PTHR30473:SF2 113 289 5.1E-179 T 22-04-2016 RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 PANTHER PTHR30473:SF2 310 575 5.1E-179 T 22-04-2016 RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 Gene3D G3DSA:3.40.50.300 359 574 6.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 SUPERFAMILY SSF88723 114 175 6.47E-11 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 SUPERFAMILY SSF88723 212 265 6.47E-11 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 SMART SM00670 114 249 3.2E-11 T 22-04-2016 IPR002716 PIN domain RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 PANTHER PTHR30473 113 289 5.1E-179 T 22-04-2016 RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 PANTHER PTHR30473 310 575 5.1E-179 T 22-04-2016 RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 Pfam PF02562 PhoH-like protein 362 569 3.3E-54 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 SUPERFAMILY SSF52540 361 447 8.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 SUPERFAMILY SSF52540 260 293 8.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 SUPERFAMILY SSF52540 480 555 8.32E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05915 2b63b817787b929754666a06ca1f2a3f 575 Pfam PF13638 PIN domain 116 261 1.2E-39 T 22-04-2016 IPR002716 PIN domain RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.169 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 Gene3D G3DSA:3.20.19.10 1 204 9.6E-54 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 SUPERFAMILY SSF52016 1 202 4.32E-65 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 PANTHER PTHR11670:SF27 1 208 1.1E-105 T 22-04-2016 RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 Pfam PF00694 Aconitase C-terminal domain 1 131 1.9E-38 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.6E-81 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10540 ed34bb36868421509fb28b3bed6ff6c1 216 PANTHER PTHR11670 1 208 1.1E-105 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 SUPERFAMILY SSF51735 2 333 6.18E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 322 2.9E-100 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 Gene3D G3DSA:3.90.25.10 191 346 1.8E-56 T 22-04-2016 RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 Gene3D G3DSA:3.40.50.720 2 190 9.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 PANTHER PTHR10366:SF41 1 349 3.9E-169 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 1.1E-152 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 RPIC_RS03120 1da778e4e5216038f38b3e63dfbe80e3 353 PANTHER PTHR10366 1 349 3.9E-169 T 22-04-2016 RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 Gene3D G3DSA:1.10.10.10 24 89 1.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 84 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 PANTHER PTHR11751 102 485 8.0E-122 T 22-04-2016 RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 SUPERFAMILY SSF53383 115 485 2.88E-88 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 SUPERFAMILY SSF46785 22 94 2.52E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 Gene3D G3DSA:3.40.640.10 157 373 2.1E-55 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 PANTHER PTHR11751:SF10 102 485 8.0E-122 T 22-04-2016 RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 Pfam PF00155 Aminotransferase class I and II 154 450 1.6E-23 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS16850 abc80c5f6e75eace94ae42a60950b912 489 SMART SM00345 29 87 4.9E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 Gene3D G3DSA:1.10.760.10 230 275 5.7E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 Gene3D G3DSA:1.10.760.10 324 426 5.7E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 Gene3D G3DSA:1.10.760.10 48 229 3.4E-36 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 SUPERFAMILY SSF46626 201 275 1.82E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 SUPERFAMILY SSF46626 324 422 1.82E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 Pfam PF03150 Di-haem cytochrome c peroxidase 55 226 1.5E-38 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 SUPERFAMILY SSF46626 56 209 1.35E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 PANTHER PTHR30600:SF5 53 361 2.5E-80 T 22-04-2016 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 PANTHER PTHR30600:SF5 396 431 2.5E-80 T 22-04-2016 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 PANTHER PTHR30600 53 361 2.5E-80 T 22-04-2016 RPIC_RS09270 f4e1340982afa425af4c8ee18a7e7320 468 PANTHER PTHR30600 396 431 2.5E-80 T 22-04-2016 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 Pfam PF01545 Cation efflux family 250 357 2.6E-11 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 Pfam PF01545 Cation efflux family 30 160 4.0E-25 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 Gene3D G3DSA:1.20.1510.10 290 356 1.4E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 Gene3D G3DSA:1.20.1510.10 25 155 1.4E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 430 3.1E-66 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562 7 173 1.0E-121 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562 291 432 1.0E-121 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562:SF40 7 173 1.0E-121 T 22-04-2016 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562:SF40 291 432 1.0E-121 T 22-04-2016 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 SUPERFAMILY SSF161111 23 155 6.67E-44 T 22-04-2016 RPIC_RS08245 de28f6125b602d9f1607ee9192fe428f 434 SUPERFAMILY SSF161111 290 358 6.67E-44 T 22-04-2016 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 Pfam PF01545 Cation efflux family 250 357 2.6E-11 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 Pfam PF01545 Cation efflux family 30 160 4.0E-25 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 Gene3D G3DSA:1.20.1510.10 290 356 1.4E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 Gene3D G3DSA:1.20.1510.10 25 155 1.4E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 430 3.1E-66 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562 7 173 1.0E-121 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562 291 432 1.0E-121 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562:SF40 7 173 1.0E-121 T 22-04-2016 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 PANTHER PTHR11562:SF40 291 432 1.0E-121 T 22-04-2016 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 SUPERFAMILY SSF161111 23 155 6.67E-44 T 22-04-2016 RPIC_RS14470 de28f6125b602d9f1607ee9192fe428f 434 SUPERFAMILY SSF161111 290 358 6.67E-44 T 22-04-2016 RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 PIRSF PIRSF002816 1 334 6.2E-135 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 Gene3D G3DSA:3.40.50.2300 157 306 2.4E-39 T 22-04-2016 RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 SUPERFAMILY SSF53822 34 332 5.23E-53 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 35 319 1.0E-35 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 Gene3D G3DSA:3.40.50.2300 33 156 5.6E-33 T 22-04-2016 RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 PANTHER PTHR30036:SF1 2 316 3.4E-32 T 22-04-2016 RPIC_RS14815 910d8ae5f8cb57d5fa4fdbfe8c387e8b 334 PANTHER PTHR30036 2 316 3.4E-32 T 22-04-2016 RPIC_RS05730 44da002debcfb913872c3ba7e38e30ae 329 Gene3D G3DSA:3.40.50.2000 149 271 5.6E-15 T 22-04-2016 RPIC_RS05730 44da002debcfb913872c3ba7e38e30ae 329 PANTHER PTHR12526 45 327 4.7E-25 T 22-04-2016 RPIC_RS05730 44da002debcfb913872c3ba7e38e30ae 329 PANTHER PTHR12526:SF397 45 327 4.7E-25 T 22-04-2016 RPIC_RS05730 44da002debcfb913872c3ba7e38e30ae 329 SUPERFAMILY SSF53756 46 320 2.88E-38 T 22-04-2016 RPIC_RS05730 44da002debcfb913872c3ba7e38e30ae 329 Pfam PF00534 Glycosyl transferases group 1 152 276 8.1E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS04610 3e4c71a3cd55ce8098c3d756a2e4a2aa 191 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 76 4.3E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC_RS04610 3e4c71a3cd55ce8098c3d756a2e4a2aa 191 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC_RS04610 3e4c71a3cd55ce8098c3d756a2e4a2aa 191 PANTHER PTHR14269:SF13 2 186 4.0E-63 T 22-04-2016 RPIC_RS04610 3e4c71a3cd55ce8098c3d756a2e4a2aa 191 PANTHER PTHR14269 2 186 4.0E-63 T 22-04-2016 RPIC_RS04610 3e4c71a3cd55ce8098c3d756a2e4a2aa 191 PIRSF PIRSF000847 1 191 1.6E-42 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RPIC_RS04610 3e4c71a3cd55ce8098c3d756a2e4a2aa 191 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 3.1E-51 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 Gene3D G3DSA:3.30.450.20 23 138 4.6E-24 T 22-04-2016 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 SUPERFAMILY SSF55874 233 366 4.52E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 145 4.2E-21 T 22-04-2016 IPR000014 PAS domain RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 SMART SM00086 98 140 0.0017 T 22-04-2016 IPR001610 PAC motif RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 SUPERFAMILY SSF55785 23 132 3.49E-25 T 22-04-2016 IPR000014 PAS domain RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 Pfam PF07730 Histidine kinase 163 232 9.7E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 PANTHER PTHR24423 22 144 4.5E-43 T 22-04-2016 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 PANTHER PTHR24423 243 249 4.5E-43 T 22-04-2016 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 PANTHER PTHR24423:SF416 22 144 4.5E-43 T 22-04-2016 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 PANTHER PTHR24423:SF416 243 249 4.5E-43 T 22-04-2016 RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 Pfam PF13426 PAS domain 37 139 3.8E-15 T 22-04-2016 IPR000014 PAS domain RPIC_RS16955 5fd92cc681a4660cc1567d881a1119bc 378 SMART SM00091 24 93 0.003 T 22-04-2016 IPR000014 PAS domain RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 Pfam PF00580 UvrD/REP helicase N-terminal domain 205 247 1.3E-6 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 Pfam PF13361 UvrD-like helicase C-terminal domain 417 473 3.5E-13 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 SUPERFAMILY SSF52540 2 117 2.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 SUPERFAMILY SSF52540 191 476 2.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 PANTHER PTHR11070 1 477 4.7E-39 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 Gene3D G3DSA:3.40.50.300 2 93 4.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 Gene3D G3DSA:3.40.50.300 187 266 4.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 Gene3D G3DSA:3.40.50.300 407 473 7.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07745 ae9fe9c5741609302f227233727611a6 486 Gene3D G3DSA:3.40.50.300 267 338 7.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 Gene3D G3DSA:3.40.30.10 1 82 1.1E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 Gene3D G3DSA:1.20.1050.10 83 200 1.6E-54 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 SUPERFAMILY SSF47616 85 202 1.12E-39 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 196 2.1E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 79 5.9E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 SUPERFAMILY SSF52833 2 83 4.49E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 PANTHER PTHR11260:SF178 2 212 5.8E-80 T 22-04-2016 RPIC_RS10705 d541b76a021cdb0d429131df3bb7375a 230 PANTHER PTHR11260 2 212 5.8E-80 T 22-04-2016 RPIC_RS06440 f0f7c3aab00204d93c6b4639e06e1127 298 Pfam PF10118 Predicted metal-dependent hydrolase 9 268 7.1E-73 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC_RS06440 f0f7c3aab00204d93c6b4639e06e1127 298 PIRSF PIRSF007580 1 288 1.8E-97 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC_RS06440 f0f7c3aab00204d93c6b4639e06e1127 298 PANTHER PTHR39456:SF1 1 291 1.4E-121 T 22-04-2016 RPIC_RS06440 f0f7c3aab00204d93c6b4639e06e1127 298 PANTHER PTHR39456 1 291 1.4E-121 T 22-04-2016 RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 106 285 2.3E-48 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 Pfam PF07549 SecD/SecF GG Motif 32 59 2.7E-8 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 Pfam PF02355 Protein export membrane protein 112 296 5.7E-64 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 299 28.517 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 288 1.9E-72 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 SUPERFAMILY SSF82866 71 299 1.44E-39 T 22-04-2016 RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 PRINTS PR01755 Bacterial translocase SecF protein signature 236 251 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 6.3E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 Gene3D G3DSA:1.20.1640.10 127 307 1.5E-27 T 22-04-2016 RPIC_RS14575 73ab8bbeea3eb38bd20615d5f8fb8bdb 323 PANTHER PTHR30081 7 318 1.4E-74 T 22-04-2016 RPIC_RS10805 b174685059ad3adba9dfbb7419873ab5 153 PIRSF PIRSF032131 1 150 2.5E-56 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 RPIC_RS10805 b174685059ad3adba9dfbb7419873ab5 153 Pfam PF06676 Protein of unknown function (DUF1178) 1 145 3.4E-53 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 PANTHER PTHR30085 15 297 5.4E-108 T 22-04-2016 RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 270 5.1E-44 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 Gene3D G3DSA:3.40.190.10 233 274 1.3E-26 T 22-04-2016 RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 Gene3D G3DSA:3.40.190.10 37 125 1.3E-26 T 22-04-2016 RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 SMART SM00062 40 272 3.3E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 Gene3D G3DSA:3.40.190.10 126 232 3.8E-27 T 22-04-2016 RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 SUPERFAMILY SSF53850 11 272 1.3E-57 T 22-04-2016 RPIC_RS18180 6d32d64a9257e1eeeb4be06face45d03 301 PANTHER PTHR30085:SF2 15 297 5.4E-108 T 22-04-2016 RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 Pfam PF00106 short chain dehydrogenase 4 198 1.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PANTHER PTHR24322 7 142 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PANTHER PTHR24322 158 190 1.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 9.7E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 SUPERFAMILY SSF51735 4 254 1.77E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00645 8f8719f4dd8eef6568ceddc2ca871c4f 266 Gene3D G3DSA:3.40.50.720 3 246 8.1E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PIRSF PIRSF001220 1 329 8.3E-78 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 Gene3D G3DSA:3.40.50.40 219 322 1.1E-30 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 88 98 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 SUPERFAMILY SSF53774 3 321 5.1E-88 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PANTHER PTHR11707 1 315 1.7E-74 T 22-04-2016 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 SMART SM00870 5 321 2.1E-122 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PRINTS PR00139 Asparaginase/glutaminase family signature 265 283 1.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PRINTS PR00139 Asparaginase/glutaminase family signature 87 105 1.5E-21 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 Pfam PF00710 Asparaginase, N-terminal 6 197 1.2E-55 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 Gene3D G3DSA:3.40.50.1170 2 197 1.4E-60 T 22-04-2016 IPR027474 L-asparaginase, N-terminal RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PIRSF PIRSF500176 2 327 2.2E-71 T 22-04-2016 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 PANTHER PTHR11707:SF29 1 315 1.7E-74 T 22-04-2016 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RPIC_RS05865 8d1b2fd64fb2d7db9493254852b5fd18 330 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 2 321 1.6E-94 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 Gene3D G3DSA:4.10.520.10 37 128 1.9E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 PANTHER PTHR33175:SF2 38 132 1.1E-48 T 22-04-2016 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 36 132 29.881 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 PANTHER PTHR33175 38 132 1.1E-48 T 22-04-2016 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 SMART SM00411 38 127 5.3E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 PRINTS PR01727 Prokaryotic integration host factor signature 77 92 6.2E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 PRINTS PR01727 Prokaryotic integration host factor signature 95 108 6.2E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 PRINTS PR01727 Prokaryotic integration host factor signature 111 125 6.2E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 83 102 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 37 129 2.5E-43 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 Pfam PF00216 Bacterial DNA-binding protein 38 126 1.5E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09690 ce94fc793c1e2637f9c42fc0249b4cdc 138 SUPERFAMILY SSF47729 38 127 3.24E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 SMART SM00387 352 448 9.8E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 PANTHER PTHR24421 156 461 5.0E-46 T 22-04-2016 RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 SUPERFAMILY SSF55874 335 446 3.27E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 Pfam PF07730 Histidine kinase 247 313 2.0E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 Pfam PF05227 CHASE3 domain 37 166 1.6E-29 T 22-04-2016 IPR007891 CHASE3 RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 Gene3D G3DSA:3.30.565.10 340 445 4.4E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00685 1e10c8b8cf8c70aa3877f7d23adc16fc 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 446 4.4E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03410 07e79412d9d583e87ce73eaecf4ab363 153 Pfam PF00293 NUDIX domain 7 123 9.1E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS03410 07e79412d9d583e87ce73eaecf4ab363 153 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC_RS03410 07e79412d9d583e87ce73eaecf4ab363 153 SUPERFAMILY SSF55811 4 130 5.96E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS03410 07e79412d9d583e87ce73eaecf4ab363 153 Gene3D G3DSA:3.90.79.10 5 128 1.0E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS03410 07e79412d9d583e87ce73eaecf4ab363 153 PANTHER PTHR21340 110 150 1.3E-15 T 22-04-2016 RPIC_RS03410 07e79412d9d583e87ce73eaecf4ab363 153 PANTHER PTHR21340 3 92 1.3E-15 T 22-04-2016 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 102 1.7E-11 T 22-04-2016 IPR000014 PAS domain RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 Gene3D G3DSA:3.30.450.20 6 113 6.5E-13 T 22-04-2016 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 PANTHER PTHR26402:SF613 122 179 7.8E-13 T 22-04-2016 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 SUPERFAMILY SSF46894 109 180 8.16E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 Gene3D G3DSA:1.10.10.10 123 180 3.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 SMART SM00091 4 70 0.0033 T 22-04-2016 IPR000014 PAS domain RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 1.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 PANTHER PTHR26402 122 179 7.8E-13 T 22-04-2016 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 Pfam PF13426 PAS domain 14 115 1.5E-10 T 22-04-2016 IPR000014 PAS domain RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 SMART SM00421 121 178 8.1E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 175 6.0E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09760 c8d63afb145802c1329f71493ee26e4b 181 SUPERFAMILY SSF55785 6 113 1.1E-13 T 22-04-2016 IPR000014 PAS domain RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 204 212 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 PANTHER PTHR24031 124 519 6.1E-179 T 22-04-2016 RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 PANTHER PTHR24031 29 100 6.1E-179 T 22-04-2016 RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 SMART SM00487 52 273 7.7E-58 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 SUPERFAMILY SSF52540 125 412 5.93E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 Gene3D G3DSA:3.40.50.300 257 420 4.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 Gene3D G3DSA:3.40.50.300 26 256 1.7E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 SMART SM00490 310 391 7.2E-35 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 Pfam PF00271 Helicase conserved C-terminal domain 286 391 3.4E-28 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 PANTHER PTHR24031:SF261 124 519 6.1E-179 T 22-04-2016 RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 PANTHER PTHR24031:SF261 29 100 6.1E-179 T 22-04-2016 RPIC_RS04035 013c997ca734e0f911eca98919ceebd7 627 Pfam PF00270 DEAD/DEAH box helicase 57 246 5.0E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS06165 5836c13f2a9df611025bb32d64baa851 175 SUPERFAMILY SSF55729 25 165 6.35E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS06165 5836c13f2a9df611025bb32d64baa851 175 Gene3D G3DSA:3.40.630.30 24 167 1.7E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS06165 5836c13f2a9df611025bb32d64baa851 175 PANTHER PTHR23091 3 165 4.9E-25 T 22-04-2016 RPIC_RS06165 5836c13f2a9df611025bb32d64baa851 175 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 31 163 3.1E-34 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 RPIC_RS06165 5836c13f2a9df611025bb32d64baa851 175 Pfam PF00583 Acetyltransferase (GNAT) family 69 140 4.6E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 Gene3D G3DSA:3.40.50.300 82 349 2.3E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 SUPERFAMILY SSF50615 3 81 3.66E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 Gene3D G3DSA:1.10.1140.10 351 467 1.4E-55 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 SUPERFAMILY SSF52540 83 353 1.08E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 79 9.5E-17 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 1.4E-248 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 Gene3D G3DSA:2.40.10.170 3 81 2.2E-27 T 22-04-2016 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 SMART SM00382 148 333 0.001 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.432 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 SUPERFAMILY SSF47917 351 466 2.15E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 348 4.2E-63 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 PANTHER PTHR15184:SF44 1 467 0.0 T 22-04-2016 RPIC_RS17405 1299676cf205ed03b23536e6b0a00bde 467 PANTHER PTHR15184 1 467 0.0 T 22-04-2016 RPIC_RS01150 fcf9c0e25bc78b415621897404e590c0 426 Pfam PF13379 NMT1-like family 51 301 5.3E-107 T 22-04-2016 RPIC_RS01150 fcf9c0e25bc78b415621897404e590c0 426 SUPERFAMILY SSF53850 54 288 1.21E-29 T 22-04-2016 RPIC_RS01150 fcf9c0e25bc78b415621897404e590c0 426 PANTHER PTHR30024:SF7 18 425 8.5E-147 T 22-04-2016 RPIC_RS01150 fcf9c0e25bc78b415621897404e590c0 426 PANTHER PTHR30024 18 425 8.5E-147 T 22-04-2016 RPIC_RS01150 fcf9c0e25bc78b415621897404e590c0 426 Gene3D G3DSA:3.40.190.10 180 278 1.7E-7 T 22-04-2016 RPIC_RS12170 6f3e6443fb0cb02550e592e27f86d1a0 456 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 453 9.5E-170 T 22-04-2016 IPR031617 Putative exopolysaccharide exporter RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 SMART SM00448 1 115 8.0E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 PANTHER PTHR26402 1 222 9.1E-79 T 22-04-2016 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 Gene3D G3DSA:3.40.50.2300 1 122 2.7E-38 T 22-04-2016 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 SUPERFAMILY SSF52172 1 174 2.56E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 Pfam PF00072 Response regulator receiver domain 3 115 5.0E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 3.9E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 PANTHER PTHR26402:SF518 1 222 9.1E-79 T 22-04-2016 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 SMART SM00862 148 221 8.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS02305 f474d29400065c0765d13fe6c9586599 236 Gene3D G3DSA:1.10.10.10 128 223 9.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09490 4c5c08e301b263625c74a29cd7be2d5f 104 Pfam PF05154 TM2 domain 14 80 3.4E-18 T 22-04-2016 IPR007829 TM2 domain RPIC_RS09490 4c5c08e301b263625c74a29cd7be2d5f 104 PANTHER PTHR21016:SF0 14 54 2.7E-13 T 22-04-2016 RPIC_RS09490 4c5c08e301b263625c74a29cd7be2d5f 104 PANTHER PTHR21016:SF0 75 99 2.7E-13 T 22-04-2016 RPIC_RS09490 4c5c08e301b263625c74a29cd7be2d5f 104 PANTHER PTHR21016 14 54 2.7E-13 T 22-04-2016 RPIC_RS09490 4c5c08e301b263625c74a29cd7be2d5f 104 PANTHER PTHR21016 75 99 2.7E-13 T 22-04-2016 RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 PANTHER PTHR30093 1 61 5.5E-17 T 22-04-2016 RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 Pfam PF13633 Prokaryotic N-terminal methylation site 12 38 1.2E-12 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 SUPERFAMILY SSF54523 15 133 7.85E-20 T 22-04-2016 RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 Gene3D G3DSA:3.30.700.10 15 169 5.1E-35 T 22-04-2016 RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 1.5E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02345 c4a5c7546e557c04d8f45bb740a40932 169 Pfam PF00114 Pilin (bacterial filament) 44 169 2.5E-13 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 180 2.4E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 Gene3D G3DSA:2.170.130.10 46 182 1.1E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 Pfam PF00593 TonB dependent receptor 596 862 3.9E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 SUPERFAMILY SSF56935 37 348 4.19E-96 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 SUPERFAMILY SSF56935 586 863 4.19E-96 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 SUPERFAMILY SSF56935 378 529 4.19E-96 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 PANTHER PTHR32552 404 523 7.4E-38 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 PANTHER PTHR32552 77 349 7.4E-38 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 PANTHER PTHR32552 581 863 7.4E-38 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 PANTHER PTHR32552:SF37 404 523 7.4E-38 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 PANTHER PTHR32552:SF37 77 349 7.4E-38 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 PANTHER PTHR32552:SF37 581 863 7.4E-38 T 22-04-2016 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 Gene3D G3DSA:2.40.170.20 183 331 6.7E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 Gene3D G3DSA:2.40.170.20 378 524 6.7E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS12310 029ee70d8d5af42a19eb36af32bdab6a 873 Gene3D G3DSA:2.40.170.20 581 863 6.7E-88 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 PANTHER PTHR11079:SF73 323 370 1.2E-122 T 22-04-2016 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 PANTHER PTHR11079:SF73 46 305 1.2E-122 T 22-04-2016 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 Pfam PF01479 S4 domain 62 108 4.2E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 PANTHER PTHR11079 323 370 1.2E-122 T 22-04-2016 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 PANTHER PTHR11079 46 305 1.2E-122 T 22-04-2016 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 SUPERFAMILY SSF55120 121 364 5.35E-76 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 179 193 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 Pfam PF00849 RNA pseudouridylate synthase 137 291 5.6E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 Gene3D G3DSA:3.10.290.10 62 110 4.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 58 361 1.5E-93 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 SUPERFAMILY SSF55174 61 149 1.68E-9 T 22-04-2016 RPIC_RS09415 2bda65bd1105fe92e5e1518a64eebf55 370 SMART SM00363 62 127 5.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 Gene3D G3DSA:3.40.309.10 282 470 8.8E-70 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 PANTHER PTHR11699 4 497 1.5E-296 T 22-04-2016 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 PANTHER PTHR11699:SF49 4 497 1.5E-296 T 22-04-2016 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 44 493 3.7E-216 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 Pfam PF00171 Aldehyde dehydrogenase family 33 494 2.0E-173 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 SUPERFAMILY SSF53720 16 496 3.14E-173 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 Gene3D G3DSA:3.40.605.10 24 281 1.0E-103 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS18465 3381ef50ac242be8bad62224986941f0 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 268 275 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 PANTHER PTHR33751:SF3 50 219 1.6E-47 T 22-04-2016 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 SUPERFAMILY SSF46626 31 117 3.4E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 Gene3D G3DSA:1.10.760.10 19 54 2.8E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 SUPERFAMILY SSF46626 131 217 1.03E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 PANTHER PTHR33751 50 219 1.6E-47 T 22-04-2016 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 Gene3D G3DSA:1.10.760.10 55 120 8.8E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 Gene3D G3DSA:1.10.760.10 143 218 6.3E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 Pfam PF00034 Cytochrome c 136 217 1.5E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 Pfam PF00034 Cytochrome c 34 117 4.6E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16120 325a3ab801b04adf0bf64d2a65fa42b2 219 PIRSF PIRSF000005 1 219 1.2E-66 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 SMART SM01209 101 294 9.7E-137 T 22-04-2016 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 3.6E-30 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 43.265 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.8E-35 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Gene3D G3DSA:3.90.600.10 329 420 8.0E-35 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 6.4E-172 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 SUPERFAMILY SSF51246 327 420 3.45E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Gene3D G3DSA:3.30.1490.20 119 188 1.8E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 SUPERFAMILY SSF52440 1 101 9.78E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Gene3D G3DSA:3.30.470.20 190 326 6.0E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 6.4E-78 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 Gene3D G3DSA:3.40.50.20 2 93 6.0E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 SUPERFAMILY SSF56059 102 324 1.94E-66 T 22-04-2016 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 SMART SM01210 328 420 3.2E-53 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS11770 6b06eecb41bb8b66a3c30048c215de98 422 PANTHER PTHR10520 1 422 8.6E-264 T 22-04-2016 RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 SMART SM00100 32 153 7.1E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 Gene3D G3DSA:1.10.10.10 168 238 4.9E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 SUPERFAMILY SSF51206 38 158 1.11E-27 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 Pfam PF13545 Crp-like helix-turn-helix domain 170 236 1.9E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 Gene3D G3DSA:2.60.120.10 33 159 8.5E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 Pfam PF00027 Cyclic nucleotide-binding domain 52 137 4.6E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 PANTHER PTHR24567:SF30 32 239 1.4E-41 T 22-04-2016 RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 PANTHER PTHR24567 32 239 1.4E-41 T 22-04-2016 RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 SUPERFAMILY SSF46785 168 238 1.27E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16875 04f874b5ffcb3c176d83968a8c0030c7 243 SMART SM00419 182 230 1.5E-4 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 PANTHER PTHR24220:SF550 5 245 1.5E-125 T 22-04-2016 RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 SUPERFAMILY SSF52540 4 237 4.24E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 PANTHER PTHR24220 5 245 1.5E-125 T 22-04-2016 RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 Gene3D G3DSA:3.40.50.300 2 241 1.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 Pfam PF00005 ABC transporter 19 170 1.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 PIRSF PIRSF039085 1 245 8.6E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC_RS00085 d36138ca36162f1f517c5f5423e202bb 245 SMART SM00382 28 218 1.0E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14330 26a353d103139c8509129d9bd7f71d0f 159 Pfam PF07883 Cupin domain 49 117 2.9E-17 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS14330 26a353d103139c8509129d9bd7f71d0f 159 PANTHER PTHR35848 35 158 5.4E-17 T 22-04-2016 RPIC_RS14330 26a353d103139c8509129d9bd7f71d0f 159 SUPERFAMILY SSF51182 6 148 1.47E-26 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS14330 26a353d103139c8509129d9bd7f71d0f 159 Gene3D G3DSA:2.60.120.10 29 117 6.6E-25 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS08140 2117594b83bb23e7068ab9a5d77421f9 83 Pfam PF11666 Protein of unknown function (DUF2933) 26 75 2.9E-23 T 22-04-2016 IPR021682 Protein of unknown function DUF2933 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 SUPERFAMILY SSF64288 112 268 2.2E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751 37 103 8.9E-23 T 22-04-2016 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751 149 173 8.9E-23 T 22-04-2016 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 SMART SM00866 121 263 3.5E-36 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 Gene3D G3DSA:3.40.1410.10 97 268 2.7E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 Pfam PF07702 UTRA domain 124 262 4.9E-37 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751:SF292 37 103 8.9E-23 T 22-04-2016 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 PANTHER PTHR11751:SF292 149 173 8.9E-23 T 22-04-2016 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 Gene3D G3DSA:1.10.10.10 37 96 2.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 SMART SM00345 42 101 4.1E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 75 91 7.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 75 7.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 SUPERFAMILY SSF46785 36 113 2.14E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10580 c51bd0f2fae8e3577c853b9f3511eb83 269 Pfam PF00392 Bacterial regulatory proteins, gntR family 38 101 4.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PIRSF PIRSF004557 1 435 9.3E-124 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PANTHER PTHR10906:SF2 1 440 4.8E-215 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 17 35 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 145 170 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 263 282 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 171 194 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 69 89 1.4E-93 T 22-04-2016 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 424 9.2E-129 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 ProSitePatterns PS00755 Protein secY signature 1. 70 89 - T 22-04-2016 IPR030659 SecY conserved site RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 SUPERFAMILY SSF103491 4 419 4.32E-131 T 22-04-2016 IPR023201 SecY subunit domain RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 ProSitePatterns PS00756 Protein secY signature 2. 164 181 - T 22-04-2016 IPR030659 SecY conserved site RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 Pfam PF00344 SecY translocase 70 412 1.1E-115 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 PANTHER PTHR10906 1 440 4.8E-215 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 4 428 29.405 T 22-04-2016 IPR026593 Protein translocase subunit SecY RPIC_RS16180 561373fe25acfde82f393a0218ff3a0c 440 Gene3D G3DSA:1.10.3370.10 3 432 7.8E-166 T 22-04-2016 IPR023201 SecY subunit domain RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 122 15.83 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 Gene3D G3DSA:3.30.230.10 6 102 5.6E-25 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 PANTHER PTHR33992 2 134 2.2E-18 T 22-04-2016 RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 SUPERFAMILY SSF54211 5 100 3.79E-22 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 14 87 4.0E-31 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 Pfam PF00825 Ribonuclease P 7 100 4.8E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC_RS18635 9208999a6106a1333cedeca79f85ede0 140 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 88 2.0E-16 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RPIC_RS02350 b9880d9d26bfc82e9356411e3ac0eed7 578 Pfam PF15864 Protein glycosylation ligase 163 188 1.2E-8 T 22-04-2016 IPR031726 Protein glycosylation ligase domain RPIC_RS02350 b9880d9d26bfc82e9356411e3ac0eed7 578 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 376 547 1.8E-34 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal RPIC_RS02350 b9880d9d26bfc82e9356411e3ac0eed7 578 Pfam PF04932 O-Antigen ligase 202 354 1.6E-10 T 22-04-2016 IPR007016 O-antigen ligase-related RPIC_RS04075 931f0232d88f0a485c47db65e25a0523 296 Pfam PF01464 Transglycosylase SLT domain 118 223 5.7E-30 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS04075 931f0232d88f0a485c47db65e25a0523 296 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 136 164 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RPIC_RS04075 931f0232d88f0a485c47db65e25a0523 296 Gene3D G3DSA:1.10.530.10 104 248 8.0E-50 T 22-04-2016 RPIC_RS04075 931f0232d88f0a485c47db65e25a0523 296 SUPERFAMILY SSF53955 111 247 1.1E-45 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS04075 931f0232d88f0a485c47db65e25a0523 296 PANTHER PTHR21666 98 248 1.9E-39 T 22-04-2016 RPIC_RS15550 41e09c182d53885a44a928b5ef7ccc93 103 Gene3D G3DSA:3.40.30.10 8 102 5.6E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15550 41e09c182d53885a44a928b5ef7ccc93 103 PANTHER PTHR10293 2 102 4.2E-65 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related RPIC_RS15550 41e09c182d53885a44a928b5ef7ccc93 103 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 4.2E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related RPIC_RS15550 41e09c182d53885a44a928b5ef7ccc93 103 PIRSF PIRSF005894 1 103 1.1E-49 T 22-04-2016 IPR014434 Monothiol glutaredoxin RPIC_RS15550 41e09c182d53885a44a928b5ef7ccc93 103 Pfam PF00462 Glutaredoxin 17 82 2.7E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RPIC_RS15550 41e09c182d53885a44a928b5ef7ccc93 103 SUPERFAMILY SSF52833 2 102 3.2E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03440 67f1437abaada248d425bd680bfd40f5 91 PANTHER PTHR35893:SF3 1 91 3.1E-24 T 22-04-2016 RPIC_RS03440 67f1437abaada248d425bd680bfd40f5 91 Pfam PF05957 Bacterial protein of unknown function (DUF883) 2 91 1.1E-33 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RPIC_RS03440 67f1437abaada248d425bd680bfd40f5 91 PANTHER PTHR35893 1 91 3.1E-24 T 22-04-2016 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 SUPERFAMILY SSF52172 3 126 4.98E-42 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 PANTHER PTHR26402:SF576 3 234 5.0E-112 T 22-04-2016 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 Gene3D G3DSA:3.40.50.2300 3 125 2.1E-40 T 22-04-2016 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 SMART SM00862 154 231 1.9E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 7.4E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 231 2.2E-104 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 Gene3D G3DSA:1.10.10.10 129 233 2.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 Pfam PF00072 Response regulator receiver domain 5 117 4.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 SUPERFAMILY SSF46894 124 232 2.35E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 PANTHER PTHR26402 3 234 5.0E-112 T 22-04-2016 RPIC_RS09950 f96b896167e385a997b7cafd0edcf072 237 SMART SM00448 3 116 2.5E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Pfam PF01645 Conserved region in glutamate synthase 827 1224 1.7E-157 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Pfam PF00310 Glutamine amidotransferases class-II 28 451 2.1E-186 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Pfam PF01493 GXGXG motif 1305 1490 9.3E-82 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Pfam PF04898 Glutamate synthase central domain 482 766 2.0E-110 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 PANTHER PTHR11938:SF1 17 939 0.0 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Gene3D G3DSA:3.20.20.70 866 1262 1.7E-183 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 SUPERFAMILY SSF69336 1273 1559 2.49E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 PANTHER PTHR11938:SF1 960 1489 0.0 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 PANTHER PTHR11938:SF1 1510 1561 0.0 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 PANTHER PTHR11938 960 1489 0.0 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Gene3D G3DSA:2.160.20.60 1278 1567 9.3E-109 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Gene3D G3DSA:3.20.20.70 465 817 9.7E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 PANTHER PTHR11938 17 939 0.0 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 PANTHER PTHR11938 1510 1561 0.0 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 SUPERFAMILY SSF56235 28 453 1.78E-154 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 Gene3D G3DSA:3.60.20.10 28 462 1.6E-189 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 SUPERFAMILY SSF51395 475 936 2.44E-266 T 22-04-2016 RPIC_RS16010 ac281ba1961a39e80cdd76f68c785d15 1573 SUPERFAMILY SSF51395 964 1259 2.44E-266 T 22-04-2016 RPIC_RS07670 bf98d5be17074b7301ca4c856b8d08bb 358 SUPERFAMILY SSF57783 17 97 5.21E-8 T 22-04-2016 RPIC_RS07670 bf98d5be17074b7301ca4c856b8d08bb 358 Pfam PF08273 Zinc-binding domain of primase-helicase 36 77 1.5E-13 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- RPIC_RS07670 bf98d5be17074b7301ca4c856b8d08bb 358 Pfam PF13362 Toprim domain 247 344 5.7E-8 T 22-04-2016 IPR006171 Toprim domain RPIC_RS07670 bf98d5be17074b7301ca4c856b8d08bb 358 SMART SM00778 36 77 1.6E-14 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 Pfam PF03466 LysR substrate binding domain 93 304 1.4E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 Gene3D G3DSA:3.40.190.10 173 274 4.8E-25 T 22-04-2016 RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 SUPERFAMILY SSF53850 89 304 3.08E-34 T 22-04-2016 RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 7.9E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 Gene3D G3DSA:1.10.10.10 3 81 5.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 Gene3D G3DSA:3.40.190.10 280 308 1.8E-17 T 22-04-2016 RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 Gene3D G3DSA:3.40.190.10 89 172 1.8E-17 T 22-04-2016 RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 PANTHER PTHR30118 1 314 2.7E-58 T 22-04-2016 RPIC_RS14710 6afb84362d19191d65f173c925a2aac9 347 SUPERFAMILY SSF46785 2 81 5.44E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11340 05b6d43172bdc9abda07bf404a2c6796 421 Pfam PF11651 P22 coat protein - gene protein 5 2 419 1.2E-159 T 22-04-2016 IPR024659 Major capsid protein Gp5 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 466 48.605 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 PIRSF PIRSF001109 2 474 2.9E-189 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 SMART SM00996 10 473 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 231 390 5.9E-81 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Gene3D G3DSA:3.40.50.1480 391 474 1.5E-32 T 22-04-2016 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 466 3.4E-183 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 10 473 9.6E-146 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 SMART SM00997 231 390 7.6E-113 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 PANTHER PTHR23420 8 145 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 PANTHER PTHR23420 181 474 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 253 269 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Gene3D G3DSA:3.40.50.720 270 369 6.5E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Gene3D G3DSA:3.40.50.1480 8 146 1.9E-122 T 22-04-2016 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 Gene3D G3DSA:3.40.50.1480 182 269 1.9E-122 T 22-04-2016 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 SUPERFAMILY SSF52283 9 147 6.8E-113 T 22-04-2016 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 SUPERFAMILY SSF52283 183 230 6.8E-113 T 22-04-2016 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 SUPERFAMILY SSF52283 391 474 6.8E-113 T 22-04-2016 RPIC_RS18130 0c3eb5ece2b6a550d2be124e016dffb9 474 SUPERFAMILY SSF51735 231 390 5.08E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 26.988 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 1.7E-62 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 Pfam PF00572 Ribosomal protein L13 15 138 2.3E-54 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 PANTHER PTHR11545 1 142 1.8E-71 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 SUPERFAMILY SSF52161 1 139 1.15E-58 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 PIRSF PIRSF002181 1 142 3.1E-47 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RPIC_RS01795 a95f93016a8ca6d3d38a2b2aa42a4afd 142 Gene3D G3DSA:3.90.1180.10 3 141 3.7E-63 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 Pfam PF13410 Glutathione S-transferase, C-terminal domain 132 172 1.3E-7 T 22-04-2016 RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 SUPERFAMILY SSF47616 86 199 2.56E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 78 9.6E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 Gene3D G3DSA:1.20.1050.10 92 191 3.7E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 Gene3D G3DSA:3.40.30.10 7 91 8.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 PANTHER PTHR11260:SF253 7 201 9.4E-61 T 22-04-2016 RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 PANTHER PTHR11260 7 201 9.4E-61 T 22-04-2016 RPIC_RS02635 c929bac3a121d9aeb1becb9b81fefe14 222 SUPERFAMILY SSF52833 6 88 3.74E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS07070 a84002150e39a4f5befb0298b48bbecb 96 Pfam PF16290 Domain of unknown function (DUF4936) 6 91 2.1E-29 T 22-04-2016 IPR032556 Protein of unknown function DUF4936 RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 PANTHER PTHR10996 13 308 1.5E-109 T 22-04-2016 RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 Gene3D G3DSA:3.40.50.720 11 113 4.0E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 SUPERFAMILY SSF51735 98 278 1.12E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 Gene3D G3DSA:3.40.50.720 114 279 1.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 PANTHER PTHR10996:SF114 13 308 1.5E-109 T 22-04-2016 RPIC_RS00550 b3089224bdcc4b3a67e0be32ded04de7 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 278 9.1E-46 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 Pfam PF01145 SPFH domain / Band 7 family 26 194 6.0E-34 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 SUPERFAMILY SSF117892 52 185 1.18E-42 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 SMART SM00244 21 178 1.1E-61 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PANTHER PTHR10264 11 243 6.6E-110 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PANTHER PTHR10264:SF60 11 243 6.6E-110 T 22-04-2016 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 173 194 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 130 153 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 110 127 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 198 221 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 75 96 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 154 172 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS03670 da44cff883a18ecf8489ea0d5aeed2c9 252 PRINTS PR00721 Stomatin signature 28 50 2.0E-62 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 44.882 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 1.0E-17 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 Pfam PF00588 SpoU rRNA Methylase family 97 237 8.3E-41 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 SUPERFAMILY SSF55315 2 78 1.18E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 PANTHER PTHR12029 6 243 4.5E-72 T 22-04-2016 RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 SUPERFAMILY SSF75217 87 245 2.75E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 Gene3D G3DSA:3.40.1280.10 94 245 4.6E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 SMART SM00967 6 82 1.3E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 Gene3D G3DSA:3.30.1330.30 1 77 1.7E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC_RS05335 3cfd19b1e396eb00a3500c1a3f28fbc9 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 243 7.0E-75 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 Gene3D G3DSA:3.40.190.10 178 263 7.7E-25 T 22-04-2016 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 Pfam PF03466 LysR substrate binding domain 89 292 4.8E-42 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 Gene3D G3DSA:3.40.190.10 91 177 1.8E-16 T 22-04-2016 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 Gene3D G3DSA:1.10.10.10 4 89 1.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 PANTHER PTHR30419:SF3 1 291 1.3E-92 T 22-04-2016 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 SUPERFAMILY SSF53850 90 293 4.1E-41 T 22-04-2016 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 PANTHER PTHR30419 1 291 1.3E-92 T 22-04-2016 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13850 d6cf1074c2a2b079c92ccd05eac4de10 297 SUPERFAMILY SSF46785 3 111 1.36E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 Gene3D G3DSA:2.140.10.10 22 389 3.7E-62 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SUPERFAMILY SSF50998 41 383 9.31E-76 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 Pfam PF13360 PQQ-like domain 88 318 9.5E-59 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 21 389 5.6E-134 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 328 360 11.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 75 106 3.6E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 287 319 23.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 114 145 450.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 153 185 0.01 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 198 230 8.9 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 SMART SM00564 249 281 700.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 16 391 38.564 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 PANTHER PTHR32303 1 382 1.2E-60 T 22-04-2016 RPIC_RS05275 e290580bec169039b38dcacbd8ff284f 392 PANTHER PTHR32303:SF8 1 382 1.2E-60 T 22-04-2016 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 SUPERFAMILY SSF47384 293 375 9.61E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PANTHER PTHR24423:SF474 196 204 1.2E-56 T 22-04-2016 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PANTHER PTHR24423:SF474 245 544 1.2E-56 T 22-04-2016 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 SMART SM00388 310 375 8.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 Gene3D G3DSA:1.10.287.130 302 371 6.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 3.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 528 3.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 3.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 Gene3D G3DSA:3.30.565.10 386 554 4.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 552 3.5E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 SMART SM00387 432 554 4.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 Pfam PF00512 His Kinase A (phospho-acceptor) domain 311 375 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PANTHER PTHR24423 196 204 1.2E-56 T 22-04-2016 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 PANTHER PTHR24423 245 544 1.2E-56 T 22-04-2016 RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 Pfam PF08521 Two-component sensor kinase N-terminal 38 157 3.6E-19 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC_RS17615 31a97229df6e613fd3103f865ef91217 557 SUPERFAMILY SSF55874 364 552 1.57E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 SUPERFAMILY SSF53328 90 288 1.15E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 SUPERFAMILY SSF55021 6 83 7.08E-19 T 22-04-2016 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PANTHER PTHR10520 6 281 3.7E-148 T 22-04-2016 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 7 287 3.4E-99 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 Gene3D G3DSA:3.40.50.170 88 283 3.6E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PIRSF PIRSF036480 3 288 1.7E-109 T 22-04-2016 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 Gene3D G3DSA:3.30.70.260 4 84 1.6E-26 T 22-04-2016 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 8 34 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 40 52 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 112 139 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 90 112 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 2.7E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 Pfam PF00551 Formyl transferase 90 269 6.2E-36 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 PANTHER PTHR10520:SF7 6 281 3.7E-148 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 3 287 47.626 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 RPIC_RS10200 fc2e92a84c0827cb6d7922a63a6909b8 288 Pfam PF13740 ACT domain 6 38 2.3E-5 T 22-04-2016 RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 61 273 1.1E-10 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 PANTHER PTHR34990 44 295 2.0E-122 T 22-04-2016 RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 Gene3D G3DSA:3.60.21.10 59 200 5.4E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 Gene3D G3DSA:3.60.21.10 242 293 5.4E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 PANTHER PTHR34990:SF2 44 295 2.0E-122 T 22-04-2016 RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 SUPERFAMILY SSF56300 235 304 3.14E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS10990 527793a068df01f227e2a003c1f6cb23 316 SUPERFAMILY SSF56300 59 176 3.14E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS05670 2b8be32ca2b69a669dc217c0961ad876 171 PANTHER PTHR32552 3 171 1.0E-31 T 22-04-2016 RPIC_RS05670 2b8be32ca2b69a669dc217c0961ad876 171 Pfam PF00665 Integrase core domain 128 170 2.0E-9 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS05670 2b8be32ca2b69a669dc217c0961ad876 171 SUPERFAMILY SSF53098 121 170 4.17E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS05670 2b8be32ca2b69a669dc217c0961ad876 171 Pfam PF13276 HTH-like domain 47 103 1.2E-13 T 22-04-2016 IPR025948 HTH-like domain RPIC_RS05670 2b8be32ca2b69a669dc217c0961ad876 171 Gene3D G3DSA:3.30.420.10 122 169 1.5E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 SUPERFAMILY SSF53067 4 184 4.61E-64 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 199 209 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 335 351 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 470 486 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 366 386 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 389 408 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PRINTS PR00301 70kDa heat shock protein signature 138 158 3.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 646 36.811 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:3.30.420.40 119 197 6.2E-62 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:3.30.420.40 4 52 6.2E-62 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:3.90.640.10 231 316 2.2E-31 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:3.30.420.40 198 230 1.7E-33 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:3.30.420.40 320 361 1.7E-33 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 2.2E-290 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 SUPERFAMILY SSF100920 385 541 3.92E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:1.20.1270.10 534 604 1.7E-29 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:3.30.30.30 53 107 7.3E-26 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PANTHER PTHR19375 2 650 0.0 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Gene3D G3DSA:2.60.34.10 391 533 1.4E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 PANTHER PTHR19375:SF173 2 650 0.0 T 22-04-2016 RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 SUPERFAMILY SSF100934 508 605 5.36E-23 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 Pfam PF00012 Hsp70 protein 4 604 3.2E-263 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS14140 40c4e82e1c93f23ea63313e7dddaaacd 650 SUPERFAMILY SSF53067 188 383 2.35E-68 T 22-04-2016 RPIC_RS12150 d90f52dae0db73a6d371ad5d7f52247f 230 SUPERFAMILY SSF161098 21 208 4.71E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS12150 d90f52dae0db73a6d371ad5d7f52247f 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 1.7E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS12150 d90f52dae0db73a6d371ad5d7f52247f 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 116 1.7E-25 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS12150 d90f52dae0db73a6d371ad5d7f52247f 230 Gene3D G3DSA:1.10.3720.10 22 223 8.6E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS12150 d90f52dae0db73a6d371ad5d7f52247f 230 PANTHER PTHR30614 1 228 4.7E-78 T 22-04-2016 RPIC_RS01375 2ca2e00bbb4a3bfe54ad6b8e73e414a5 232 PANTHER PTHR33121 5 231 9.1E-31 T 22-04-2016 RPIC_RS01375 2ca2e00bbb4a3bfe54ad6b8e73e414a5 232 Gene3D G3DSA:3.20.20.450 6 227 8.6E-46 T 22-04-2016 IPR001633 EAL domain RPIC_RS01375 2ca2e00bbb4a3bfe54ad6b8e73e414a5 232 SMART SM00052 1 232 3.0E-14 T 22-04-2016 IPR001633 EAL domain RPIC_RS01375 2ca2e00bbb4a3bfe54ad6b8e73e414a5 232 Pfam PF00563 EAL domain 9 231 1.3E-42 T 22-04-2016 IPR001633 EAL domain RPIC_RS01375 2ca2e00bbb4a3bfe54ad6b8e73e414a5 232 SUPERFAMILY SSF141868 7 231 2.48E-50 T 22-04-2016 IPR001633 EAL domain RPIC_RS09300 5fe08ffaaab1e009d70c0495cafe04ab 541 Pfam PF08811 Protein of unknown function (DUF1800) 56 451 3.9E-111 T 22-04-2016 IPR014917 Protein of unknown function DUF1800 RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 PIRSF PIRSF016183 16 193 6.9E-67 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 Gene3D G3DSA:1.10.60.30 121 191 8.0E-31 T 22-04-2016 IPR023153 PSPTO4464-like domain RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 Pfam PF04751 Protein of unknown function (DUF615) 32 185 5.9E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 Gene3D G3DSA:1.10.60.30 43 111 4.9E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 PANTHER PTHR38101:SF1 9 206 4.8E-55 T 22-04-2016 RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 22 189 22.671 T 22-04-2016 IPR006839 Ribosome-associated, YjgA RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 SUPERFAMILY SSF158710 43 187 2.09E-48 T 22-04-2016 RPIC_RS03995 32a4dfd5188716dda8b175264dfd8626 208 PANTHER PTHR38101 9 206 4.8E-55 T 22-04-2016 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 SUPERFAMILY SSF110324 2 80 1.12E-31 T 22-04-2016 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.1E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.113 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.2E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.2E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.2E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.0E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 PANTHER PTHR15893 1 86 4.4E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 4.0E-17 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15105 d3fc112f5140fb92e743f5f879e048e0 86 Gene3D G3DSA:2.40.50.100 20 81 8.3E-29 T 22-04-2016 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 25 321 37.882 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PIRSF PIRSF001438 1 334 7.1E-117 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PANTHER PTHR11557:SF0 3 327 1.7E-146 T 22-04-2016 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 26 232 1.9E-76 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PANTHER PTHR11557 3 327 1.7E-146 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 Gene3D G3DSA:3.40.190.10 24 130 4.2E-48 T 22-04-2016 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 SUPERFAMILY SSF53850 25 238 5.97E-81 T 22-04-2016 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PRINTS PR00151 Porphobilinogen deaminase signature 163 180 4.6E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PRINTS PR00151 Porphobilinogen deaminase signature 96 115 4.6E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PRINTS PR00151 Porphobilinogen deaminase signature 250 267 4.6E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 4.6E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 PRINTS PR00151 Porphobilinogen deaminase signature 65 85 4.6E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 SUPERFAMILY SSF54782 240 329 1.44E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 Gene3D G3DSA:3.30.160.40 241 328 4.0E-23 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 26 320 3.9E-103 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 246 319 2.7E-15 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 Gene3D G3DSA:3.40.190.10 131 219 1.3E-38 T 22-04-2016 RPIC_RS12660 f73fe8e6c50a7bf25869dfae13cc920b 338 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 251 267 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 Pfam PF00342 Phosphoglucose isomerase 49 532 1.4E-202 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 488 501 2.44E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 2.44E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 2.44E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 474 2.44E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 2.44E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 488 2.44E-49 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 SUPERFAMILY SSF53697 3 536 2.78E-197 T 22-04-2016 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PANTHER PTHR11469:SF4 1 537 2.8E-265 T 22-04-2016 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 515 39.039 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 PANTHER PTHR11469 1 537 2.8E-265 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 Gene3D G3DSA:3.40.50.10490 144 182 4.0E-145 T 22-04-2016 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 Gene3D G3DSA:3.40.50.10490 3 99 4.0E-145 T 22-04-2016 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 Gene3D G3DSA:3.40.50.10490 261 492 4.0E-145 T 22-04-2016 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 Gene3D G3DSA:1.10.1390.10 493 537 2.9E-18 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09120 8e2d4b549c21626775683e05769ed9c7 539 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 488 505 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Gene3D G3DSA:2.40.128.130 994 1263 1.5E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF03797 Autotransporter beta-domain 1006 1254 8.0E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 SMART SM00869 1004 1262 4.3E-26 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 SUPERFAMILY SSF103515 983 1263 9.55E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037:SF3 544 614 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 SUPERFAMILY SSF51126 733 935 4.71E-16 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 431 457 6.4E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 685 708 9.5E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 494 524 1.4E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 592 616 4.0E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 776 808 7.3E-9 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF12951 Passenger-associated-transport-repeat 777 807 1.9E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF12951 Passenger-associated-transport-repeat 430 456 2.3E-5 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF12951 Passenger-associated-transport-repeat 495 524 3.3E-8 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF12951 Passenger-associated-transport-repeat 593 616 5.3E-6 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF12951 Passenger-associated-transport-repeat 684 708 4.0E-4 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037:SF3 637 704 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Gene3D G3DSA:2.160.20.20 442 665 6.1E-14 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 4.1E-9 T 22-04-2016 IPR024973 ESPR domain RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037:SF3 412 522 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037:SF3 721 861 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 SUPERFAMILY SSF51126 470 737 4.71E-18 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037 412 522 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037 721 861 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037 544 614 3.6E-16 T 22-04-2016 RPIC_RS09100 231eb9f689daafd29c9b1b2a05e1268a 1265 PANTHER PTHR35037 637 704 3.6E-16 T 22-04-2016 RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 SMART SM00052 148 395 1.4E-67 T 22-04-2016 IPR001633 EAL domain RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 Gene3D G3DSA:3.40.50.2300 6 140 3.4E-20 T 22-04-2016 RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 Pfam PF00563 EAL domain 166 390 1.3E-59 T 22-04-2016 IPR001633 EAL domain RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 Pfam PF00072 Response regulator receiver domain 9 77 1.6E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 SMART SM00448 7 130 2.3E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 PANTHER PTHR33121:SF13 165 401 1.2E-54 T 22-04-2016 RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 SUPERFAMILY SSF141868 165 400 1.57E-65 T 22-04-2016 IPR001633 EAL domain RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 PANTHER PTHR33121 165 401 1.2E-54 T 22-04-2016 RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 SUPERFAMILY SSF52172 7 173 2.85E-20 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS17825 d39c6fe7fe7b179fd52f1bb0f68b6c36 404 Gene3D G3DSA:3.20.20.450 165 400 2.0E-69 T 22-04-2016 IPR001633 EAL domain RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 Gene3D G3DSA:3.20.20.140 6 263 4.6E-19 T 22-04-2016 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 PANTHER PTHR32294 2 1172 0.0 T 22-04-2016 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 PANTHER PTHR32294:SF0 2 1172 0.0 T 22-04-2016 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 984 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 Pfam PF14579 Helix-hairpin-helix motif 811 900 1.9E-29 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 SUPERFAMILY SSF89550 6 270 7.85E-10 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 Gene3D G3DSA:1.10.150.280 838 886 2.1E-4 T 22-04-2016 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 SMART SM00481 7 74 1.1E-22 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 Pfam PF02811 PHP domain 8 180 9.7E-38 T 22-04-2016 IPR004013 PHP domain GO:0003824 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 298 736 2.7E-176 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS11840 8c34fd30ebfea96d2b3f48bb8d141b75 1172 Gene3D G3DSA:2.40.50.140 1003 1088 9.1E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS17600 ebcdb764202f7dc13010ce11ea5ea101 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 24.404 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC_RS17600 ebcdb764202f7dc13010ce11ea5ea101 101 PANTHER PTHR12599:SF7 2 96 1.1E-51 T 22-04-2016 RPIC_RS17600 ebcdb764202f7dc13010ce11ea5ea101 101 SUPERFAMILY SSF55248 1 95 3.66E-36 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC_RS17600 ebcdb764202f7dc13010ce11ea5ea101 101 PANTHER PTHR12599 2 96 1.1E-51 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC_RS17600 ebcdb764202f7dc13010ce11ea5ea101 101 Gene3D G3DSA:3.30.1360.20 1 96 3.6E-38 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC_RS17600 ebcdb764202f7dc13010ce11ea5ea101 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 93 4.5E-32 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 RPIC_RS06475 042c362bd5555182fe4e7cc1cf229ef1 121 Gene3D G3DSA:3.10.20.280 8 93 2.0E-25 T 22-04-2016 IPR005346 RnfH protein RPIC_RS06475 042c362bd5555182fe4e7cc1cf229ef1 121 PANTHER PTHR37483 7 111 5.5E-21 T 22-04-2016 RPIC_RS06475 042c362bd5555182fe4e7cc1cf229ef1 121 PANTHER PTHR37483:SF1 7 111 5.5E-21 T 22-04-2016 RPIC_RS06475 042c362bd5555182fe4e7cc1cf229ef1 121 SUPERFAMILY SSF54285 9 83 4.36E-16 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIC_RS06475 042c362bd5555182fe4e7cc1cf229ef1 121 Pfam PF03658 RnfH family Ubiquitin 10 91 8.8E-23 T 22-04-2016 IPR005346 RnfH protein RPIC_RS06475 042c362bd5555182fe4e7cc1cf229ef1 121 Hamap MF_00460 Protein RnfH [rnfH]. 10 99 19.063 T 22-04-2016 IPR005346 RnfH protein RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 PANTHER PTHR21148 1 380 9.4E-164 T 22-04-2016 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 374 1.7E-88 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 2 372 54.311 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 4 376 4.3E-157 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 Gene3D G3DSA:3.20.20.105 1 377 3.0E-160 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 SUPERFAMILY SSF51713 1 375 6.28E-151 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 4 376 1.3E-150 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14560 68e8531636b887293bf354077f1354a5 383 PANTHER PTHR21148:SF26 1 380 9.4E-164 T 22-04-2016 RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 SUPERFAMILY SSF53850 89 298 4.81E-45 T 22-04-2016 RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 PANTHER PTHR30537 1 310 9.6E-116 T 22-04-2016 RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 PANTHER PTHR30537:SF21 1 310 9.6E-116 T 22-04-2016 RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 Gene3D G3DSA:3.40.190.10 93 176 1.4E-23 T 22-04-2016 RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 SUPERFAMILY SSF46785 2 112 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 Gene3D G3DSA:1.10.10.10 2 85 2.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 Pfam PF03466 LysR substrate binding domain 88 293 1.8E-43 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS10685 2676013c925f69f8cad61679504b5c76 331 Gene3D G3DSA:3.40.190.10 177 261 5.5E-16 T 22-04-2016 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 SUPERFAMILY SSF53901 272 393 2.43E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 Gene3D G3DSA:3.40.47.10 278 393 3.9E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 Gene3D G3DSA:3.40.47.10 144 194 3.9E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 PANTHER PTHR18919:SF95 1 394 2.2E-203 T 22-04-2016 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 PANTHER PTHR18919 1 394 2.2E-203 T 22-04-2016 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 6.5E-142 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 Pfam PF02803 Thiolase, C-terminal domain 271 393 1.8E-47 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 Pfam PF00108 Thiolase, N-terminal domain 5 264 3.3E-92 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 Gene3D G3DSA:3.40.47.10 4 125 7.4E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 Gene3D G3DSA:3.40.47.10 195 276 7.4E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 PIRSF PIRSF000429 1 394 2.5E-130 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS09370 9c216f291a94c96828e19e3b87d1db42 394 SUPERFAMILY SSF53901 4 271 5.1E-85 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS13090 888294591578f70c4bf8bd6ac63aace6 326 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 326 97.793 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC_RS13090 888294591578f70c4bf8bd6ac63aace6 326 PANTHER PTHR34308:SF1 8 325 9.0E-93 T 22-04-2016 RPIC_RS13090 888294591578f70c4bf8bd6ac63aace6 326 PANTHER PTHR34308 8 325 9.0E-93 T 22-04-2016 RPIC_RS13090 888294591578f70c4bf8bd6ac63aace6 326 Pfam PF03186 CobD/Cbib protein 21 304 3.1E-89 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC_RS13090 888294591578f70c4bf8bd6ac63aace6 326 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 21 310 5.0E-57 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 Gene3D G3DSA:3.10.105.10 340 585 1.5E-52 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 PANTHER PTHR30290 405 628 1.4E-155 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 PANTHER PTHR30290 1 376 1.4E-155 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 527 3.6E-81 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 PANTHER PTHR30290:SF2 405 628 1.4E-155 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 PANTHER PTHR30290:SF2 1 376 1.4E-155 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 Gene3D G3DSA:3.40.190.10 166 339 5.7E-31 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 PIRSF PIRSF002741 4 617 1.6E-90 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 SUPERFAMILY SSF53850 57 377 1.81E-114 T 22-04-2016 RPIC_RS05020 8d0e6399f1fafb420030759fa196d4d6 628 SUPERFAMILY SSF53850 407 618 1.81E-114 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00388 832 897 3.6E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF55874 886 1057 2.36E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.30.450.20 551 678 5.2E-18 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF55785 551 678 2.97E-18 T 22-04-2016 IPR000014 PAS domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF00072 Response regulator receiver domain 1182 1294 3.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF55785 677 810 2.27E-17 T 22-04-2016 IPR000014 PAS domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.40.50.2300 1169 1299 2.6E-36 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00086 638 680 12.0 T 22-04-2016 IPR001610 PAC motif RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00086 771 812 7.0 T 22-04-2016 IPR001610 PAC motif RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00448 1180 1294 2.7E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF52172 1179 1298 1.85E-35 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.40.190.10 472 509 3.3E-14 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.40.190.10 291 368 3.3E-14 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:1.10.287.130 826 883 1.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.40.190.10 369 471 2.2E-12 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00062 290 510 7.5E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00062 47 268 6.6E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF08447 PAS fold 720 801 9.7E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF47226 1277 1401 3.01E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 832 897 4.5E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF47384 817 898 1.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF53850 285 511 1.75E-40 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PANTHER PTHR24423:SF382 542 678 2.5E-161 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PANTHER PTHR24423:SF382 1166 1297 2.5E-161 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PANTHER PTHR24423:SF382 811 1063 2.5E-161 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SUPERFAMILY SSF53850 48 267 4.4E-23 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 291 508 2.9E-31 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 265 6.3E-14 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 999 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1044 1057 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1003 1013 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1020 1038 1.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PANTHER PTHR24423 542 678 2.5E-161 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PANTHER PTHR24423 1166 1297 2.5E-161 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 PANTHER PTHR24423 811 1063 2.5E-161 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 563 686 1.0E-10 T 22-04-2016 IPR000014 PAS domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 691 818 4.5E-8 T 22-04-2016 IPR000014 PAS domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.30.565.10 884 1058 8.1E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00091 692 765 0.4 T 22-04-2016 IPR000014 PAS domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00091 564 632 0.022 T 22-04-2016 IPR000014 PAS domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 945 1057 5.2E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.30.450.20 683 810 8.3E-19 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Pfam PF08448 PAS fold 571 681 3.6E-10 T 22-04-2016 IPR013656 PAS fold-4 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 SMART SM00387 944 1060 2.3E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:3.40.190.10 55 168 2.2E-7 T 22-04-2016 RPIC_RS16630 d6ae17c8a8f1379221f54fc583682733 1436 Gene3D G3DSA:1.20.120.160 1312 1401 1.3E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 35.513 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 241 2.1E-73 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 PANTHER PTHR10108:SF864 4 240 5.6E-134 T 22-04-2016 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 SUPERFAMILY SSF53335 1 233 3.63E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 240 1.3E-84 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 Gene3D G3DSA:3.40.50.150 19 236 6.4E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 PANTHER PTHR10108 4 240 5.6E-134 T 22-04-2016 RPIC_RS01630 df5476e890fbec1b1e12a261ae0e9ba0 243 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 151 165 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 PANTHER PTHR11262 3 106 9.3E-201 T 22-04-2016 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 PANTHER PTHR11262 218 443 9.3E-201 T 22-04-2016 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 SMART SM00382 50 332 5.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 SMART SM01086 335 431 7.9E-18 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 PANTHER PTHR11262:SF3 3 106 9.3E-201 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 PANTHER PTHR11262:SF3 218 443 9.3E-201 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 443 2.7E-205 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Gene3D G3DSA:1.10.8.10 213 243 7.6E-34 T 22-04-2016 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Gene3D G3DSA:1.10.8.10 112 177 7.6E-34 T 22-04-2016 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 443 43.858 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 102 2.2E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 187 329 4.6E-41 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 SUPERFAMILY SSF52540 4 437 1.03E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Gene3D G3DSA:1.10.8.60 334 443 3.9E-33 T 22-04-2016 RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Gene3D G3DSA:3.40.50.300 245 331 7.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18395 2cdb81e8ce939f45de8e51ae06729c8f 443 Gene3D G3DSA:3.40.50.300 5 111 7.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02620 e820b6c195b6ac05b81ec756991b9533 287 PANTHER PTHR10061 7 287 9.7E-154 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 RPIC_RS02620 e820b6c195b6ac05b81ec756991b9533 287 SUPERFAMILY SSF53474 8 286 3.32E-83 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02620 e820b6c195b6ac05b81ec756991b9533 287 Pfam PF00756 Putative esterase 28 279 1.0E-49 T 22-04-2016 IPR000801 Putative esterase RPIC_RS02620 e820b6c195b6ac05b81ec756991b9533 287 Gene3D G3DSA:3.40.50.1820 8 286 4.9E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02620 e820b6c195b6ac05b81ec756991b9533 287 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 9 286 4.7E-129 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 RPIC_RS12210 25302f62e70910f95c922c2736f652b9 156 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 133 3.3E-21 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS12210 25302f62e70910f95c922c2736f652b9 156 PANTHER PTHR33570:SF4 17 143 3.2E-40 T 22-04-2016 RPIC_RS12210 25302f62e70910f95c922c2736f652b9 156 PANTHER PTHR33570 17 143 3.2E-40 T 22-04-2016 RPIC_RS12210 25302f62e70910f95c922c2736f652b9 156 SUPERFAMILY SSF69118 17 139 1.32E-34 T 22-04-2016 IPR029032 AhpD-like RPIC_RS12210 25302f62e70910f95c922c2736f652b9 156 Gene3D G3DSA:1.20.1290.10 17 141 3.7E-42 T 22-04-2016 IPR029032 AhpD-like RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 SUPERFAMILY SSF54747 3 72 5.63E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.4E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 SUPERFAMILY SSF46906 68 141 5.23E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 SMART SM00649 9 141 4.8E-85 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 Gene3D G3DSA:1.10.10.250 73 141 9.6E-31 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.367 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 Gene3D G3DSA:3.30.1550.10 2 72 9.6E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 22-04-2016 RPIC_RS16385 b9bfcbf506321ce346223195e38f8c54 143 PANTHER PTHR11661 1 142 1.6E-70 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16555 6d4c85dc7cd7a822e9daf0acf49fd173 306 PANTHER PTHR11614 39 302 9.7E-20 T 22-04-2016 RPIC_RS16555 6d4c85dc7cd7a822e9daf0acf49fd173 306 Pfam PF12697 Alpha/beta hydrolase family 40 287 1.3E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS16555 6d4c85dc7cd7a822e9daf0acf49fd173 306 PIRSF PIRSF037442 7 306 1.4E-57 T 22-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 RPIC_RS16555 6d4c85dc7cd7a822e9daf0acf49fd173 306 PANTHER PTHR11614:SF82 39 302 9.7E-20 T 22-04-2016 RPIC_RS16555 6d4c85dc7cd7a822e9daf0acf49fd173 306 Gene3D G3DSA:3.40.50.1820 16 304 4.7E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS16555 6d4c85dc7cd7a822e9daf0acf49fd173 306 SUPERFAMILY SSF53474 12 286 3.85E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 Gene3D G3DSA:1.10.10.10 3 87 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 Pfam PF03466 LysR substrate binding domain 91 295 4.9E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 Gene3D G3DSA:3.40.190.10 92 177 1.5E-9 T 22-04-2016 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 PANTHER PTHR30419 1 295 1.3E-100 T 22-04-2016 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 SUPERFAMILY SSF46785 3 87 4.09E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 Gene3D G3DSA:3.40.190.10 178 266 2.1E-20 T 22-04-2016 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 6.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 SUPERFAMILY SSF53850 92 296 1.71E-35 T 22-04-2016 RPIC_RS06635 5a6f89c86bf73232faa0978661ec0f48 297 PANTHER PTHR30419:SF8 1 295 1.3E-100 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Gene3D G3DSA:3.30.930.10 241 529 2.0E-121 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Gene3D G3DSA:3.30.980.10 187 223 3.4E-42 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Gene3D G3DSA:3.30.980.10 66 129 3.4E-42 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Pfam PF03129 Anticodon binding domain 540 629 1.7E-22 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Gene3D G3DSA:3.40.50.800 530 634 8.6E-36 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.935 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 1.6E-224 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 SUPERFAMILY SSF52954 528 633 1.07E-32 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Pfam PF02824 TGS domain 2 61 1.1E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 SUPERFAMILY SSF81271 2 61 2.4E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Gene3D G3DSA:3.30.54.20 130 186 5.7E-23 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PANTHER PTHR11451 1 635 0.0 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 528 9.1E-42 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 1.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 1.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 1.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 1.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 1.7E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Gene3D G3DSA:3.10.20.30 1 64 1.2E-23 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 PANTHER PTHR11451:SF31 1 635 0.0 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 SUPERFAMILY SSF55681 242 525 3.5E-99 T 22-04-2016 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 SUPERFAMILY SSF55186 64 240 5.49E-67 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 SMART SM00863 169 218 9.8E-24 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC_RS09720 2ae8d47c7f286504a1f7c04c1bcab677 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 218 6.9E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC_RS13370 81d757192c63d31c2a6357d2c74df2eb 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13370 81d757192c63d31c2a6357d2c74df2eb 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.62 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13370 81d757192c63d31c2a6357d2c74df2eb 56 PANTHER PTHR15238 1 56 1.5E-22 T 22-04-2016 RPIC_RS13370 81d757192c63d31c2a6357d2c74df2eb 56 Pfam PF00471 Ribosomal protein L33 9 54 2.8E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13370 81d757192c63d31c2a6357d2c74df2eb 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 3.9E-27 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13370 81d757192c63d31c2a6357d2c74df2eb 56 SUPERFAMILY SSF57829 3 54 4.33E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 SUPERFAMILY SSF52374 14 228 1.84E-48 T 22-04-2016 RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 15 228 27.042 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 Gene3D G3DSA:3.40.50.620 16 229 2.2E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 19 227 1.4E-42 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 PANTHER PTHR39321 12 230 3.4E-30 T 22-04-2016 RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 76 3.4E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS11780 554bab877c4a386b33b4452a95575514 236 Pfam PF01467 Cytidylyltransferase-like 19 201 1.7E-23 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS05930 f014ba23c6714e885979c2d82265ab53 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 251 2.3E-48 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC_RS05930 f014ba23c6714e885979c2d82265ab53 352 SUPERFAMILY SSF51735 2 337 2.07E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05930 f014ba23c6714e885979c2d82265ab53 352 PANTHER PTHR10366:SF253 3 332 1.1E-112 T 22-04-2016 RPIC_RS05930 f014ba23c6714e885979c2d82265ab53 352 Gene3D G3DSA:3.40.50.720 1 238 1.5E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05930 f014ba23c6714e885979c2d82265ab53 352 PANTHER PTHR10366 3 332 1.1E-112 T 22-04-2016 RPIC_RS05930 f014ba23c6714e885979c2d82265ab53 352 Gene3D G3DSA:3.90.25.10 255 325 1.2E-38 T 22-04-2016 RPIC_RS00035 1b2715d498b0cc33673a1ba69642ef50 285 Pfam PF13276 HTH-like domain 28 85 2.3E-17 T 22-04-2016 IPR025948 HTH-like domain RPIC_RS00035 1b2715d498b0cc33673a1ba69642ef50 285 PANTHER PTHR32552 1 279 9.3E-70 T 22-04-2016 RPIC_RS00035 1b2715d498b0cc33673a1ba69642ef50 285 Pfam PF00665 Integrase core domain 109 225 3.0E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS00035 1b2715d498b0cc33673a1ba69642ef50 285 SUPERFAMILY SSF53098 103 267 2.58E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS00035 1b2715d498b0cc33673a1ba69642ef50 285 Gene3D G3DSA:3.30.420.10 103 265 8.2E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS08950 1b2715d498b0cc33673a1ba69642ef50 285 Pfam PF13276 HTH-like domain 28 85 2.3E-17 T 22-04-2016 IPR025948 HTH-like domain RPIC_RS08950 1b2715d498b0cc33673a1ba69642ef50 285 PANTHER PTHR32552 1 279 9.3E-70 T 22-04-2016 RPIC_RS08950 1b2715d498b0cc33673a1ba69642ef50 285 Pfam PF00665 Integrase core domain 109 225 3.0E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS08950 1b2715d498b0cc33673a1ba69642ef50 285 SUPERFAMILY SSF53098 103 267 2.58E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS08950 1b2715d498b0cc33673a1ba69642ef50 285 Gene3D G3DSA:3.30.420.10 103 265 8.2E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS03230 5d045a252711d3f9930ca850b23f3617 166 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 148 1.4E-48 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03230 5d045a252711d3f9930ca850b23f3617 166 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 27.23 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03230 5d045a252711d3f9930ca850b23f3617 166 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 147 5.5E-39 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03230 5d045a252711d3f9930ca850b23f3617 166 SUPERFAMILY SSF52121 6 151 6.41E-53 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03230 5d045a252711d3f9930ca850b23f3617 166 Gene3D G3DSA:3.40.50.960 6 152 3.5E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03230 5d045a252711d3f9930ca850b23f3617 166 PANTHER PTHR21058 10 157 4.6E-59 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 584 604 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 PANTHER PTHR11819 30 262 1.4E-154 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 ProSitePatterns PS00018 EF-hand calcium-binding domain. 458 470 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 34 672 4.7E-214 T 22-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 Pfam PF00474 Sodium:solute symporter family 487 602 1.9E-21 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 Pfam PF00474 Sodium:solute symporter family 59 222 3.4E-32 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 PANTHER PTHR11819 458 666 1.4E-154 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 PANTHER PTHR11819:SF159 458 666 1.4E-154 T 22-04-2016 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 PANTHER PTHR11819:SF159 350 428 1.4E-154 T 22-04-2016 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 PANTHER PTHR11819 350 428 1.4E-154 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS10320 3b98e6b272baccf890b5e54b2db32c39 673 PANTHER PTHR11819:SF159 30 262 1.4E-154 T 22-04-2016 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 409 163.792 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 PANTHER PTHR23100 18 409 1.1E-178 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 PANTHER PTHR23100:SF0 18 409 1.1E-178 T 22-04-2016 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 Gene3D G3DSA:3.60.70.12 13 280 1.2E-101 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 Pfam PF01960 ArgJ family 24 409 1.4E-148 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 407 0.0 T 22-04-2016 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 SUPERFAMILY SSF56266 16 406 1.18E-142 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS15170 323899a01706db84ff4b97136b2c952b 409 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 409 3.1E-129 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 Gene3D G3DSA:2.40.50.100 7 125 7.2E-43 T 22-04-2016 RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 28.093 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 SUPERFAMILY SSF51230 4 125 4.19E-38 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 4.5E-44 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 PANTHER PTHR11715 1 123 9.8E-55 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RPIC_RS17285 96ff3b252a10504b695e89c201a33b9c 126 Pfam PF01597 Glycine cleavage H-protein 8 124 3.1E-42 T 22-04-2016 IPR002930 Glycine cleavage system H-protein RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 Gene3D G3DSA:1.10.287.130 227 299 5.9E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 PANTHER PTHR24423 177 458 7.9E-104 T 22-04-2016 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 SMART SM00388 237 303 1.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 Gene3D G3DSA:3.30.565.10 309 459 8.9E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 SMART SM00304 183 236 5.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 SUPERFAMILY SSF47384 220 303 1.69E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 457 1.9E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 303 6.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 7.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 7.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 397 7.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 7.5E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 PANTHER PTHR24423:SF354 177 458 7.9E-104 T 22-04-2016 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 SUPERFAMILY SSF55874 292 457 2.62E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 SMART SM00387 346 458 1.0E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 Pfam PF00672 HAMP domain 165 233 2.3E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08545 6a3364000a6de095136b8542a36dd1d2 461 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 4 455 2.1E-137 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174:SF116 200 367 3.4E-132 T 22-04-2016 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174:SF116 102 178 3.4E-132 T 22-04-2016 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 121 4.9E-26 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174 200 367 3.4E-132 T 22-04-2016 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 PANTHER PTHR10174 102 178 3.4E-132 T 22-04-2016 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 351 1.1E-47 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 SMART SM00859 2 121 1.8E-27 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 Gene3D G3DSA:3.30.360.10 142 348 3.2E-68 T 22-04-2016 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 SUPERFAMILY SSF55347 133 352 1.44E-69 T 22-04-2016 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 365 6.0E-215 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 259 273 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 PIRSF PIRSF000148 1 367 2.6E-62 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 SUPERFAMILY SSF51735 1 146 3.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10530 d00da1af042bef5c1b83156c278e8939 367 Gene3D G3DSA:3.40.50.720 1 141 7.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04250 46137d52758ef7898dbd8d5c81ea1b11 122 Gene3D G3DSA:1.10.760.10 31 112 1.5E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS04250 46137d52758ef7898dbd8d5c81ea1b11 122 PANTHER PTHR33751 33 114 4.9E-16 T 22-04-2016 RPIC_RS04250 46137d52758ef7898dbd8d5c81ea1b11 122 PANTHER PTHR33751:SF3 33 114 4.9E-16 T 22-04-2016 RPIC_RS04250 46137d52758ef7898dbd8d5c81ea1b11 122 SUPERFAMILY SSF46626 1 112 9.31E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS01890 537a64657867e53689988f751caadf79 459 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 361 373 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RPIC_RS01890 537a64657867e53689988f751caadf79 459 SMART SM01011 7 145 8.2E-61 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RPIC_RS01890 537a64657867e53689988f751caadf79 459 SUPERFAMILY SSF55920 184 456 4.84E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS01890 537a64657867e53689988f751caadf79 459 Gene3D G3DSA:3.90.230.10 188 449 2.4E-80 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS01890 537a64657867e53689988f751caadf79 459 SUPERFAMILY SSF53092 10 183 2.44E-49 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal RPIC_RS01890 537a64657867e53689988f751caadf79 459 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 6.3E-35 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 RPIC_RS01890 537a64657867e53689988f751caadf79 459 PANTHER PTHR10804:SF17 12 456 1.1E-137 T 22-04-2016 RPIC_RS01890 537a64657867e53689988f751caadf79 459 Gene3D G3DSA:3.40.350.10 10 187 5.3E-48 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RPIC_RS01890 537a64657867e53689988f751caadf79 459 PANTHER PTHR10804 12 456 1.1E-137 T 22-04-2016 RPIC_RS01890 537a64657867e53689988f751caadf79 459 Pfam PF00557 Metallopeptidase family M24 190 434 1.2E-62 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS15985 1b7f7422824782141f971c08f1540537 175 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 4.5E-60 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 RPIC_RS15985 1b7f7422824782141f971c08f1540537 175 PANTHER PTHR33371 1 146 8.2E-41 T 22-04-2016 RPIC_RS15985 1b7f7422824782141f971c08f1540537 175 Pfam PF02470 MlaD protein 39 116 1.2E-21 T 22-04-2016 IPR003399 Mce/MlaD RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 Gene3D G3DSA:1.10.260.40 12 64 2.3E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 PANTHER PTHR30146:SF27 11 346 2.5E-84 T 22-04-2016 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 Pfam PF13377 Periplasmic binding protein-like domain 179 346 3.3E-19 T 22-04-2016 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 5.2E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 SUPERFAMILY SSF53822 69 332 6.42E-49 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 SUPERFAMILY SSF47413 11 69 1.13E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 SMART SM00354 11 82 5.1E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 Gene3D G3DSA:3.40.50.2300 183 326 2.9E-23 T 22-04-2016 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 Gene3D G3DSA:3.40.50.2300 65 182 5.8E-39 T 22-04-2016 RPIC_RS03390 ded57c930539ecc868b2da94bf4d1614 354 PANTHER PTHR30146 11 346 2.5E-84 T 22-04-2016 RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 148 257 1.5E-5 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 Gene3D G3DSA:3.40.50.720 28 99 5.6E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 SUPERFAMILY SSF51735 29 332 6.83E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 Gene3D G3DSA:3.40.50.720 123 281 1.3E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 PANTHER PTHR10366:SF430 150 342 2.7E-30 T 22-04-2016 RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 PANTHER PTHR10366:SF430 29 120 2.7E-30 T 22-04-2016 RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 PANTHER PTHR10366 150 342 2.7E-30 T 22-04-2016 RPIC_RS13305 a4d6c064de8310d7b1159a23519afb35 342 PANTHER PTHR10366 29 120 2.7E-30 T 22-04-2016 RPIC_RS16375 17f9a9832deca9088912202e13628c21 168 SUPERFAMILY SSF160369 4 159 5.62E-51 T 22-04-2016 RPIC_RS16375 17f9a9832deca9088912202e13628c21 168 PANTHER PTHR11560 2 159 9.6E-48 T 22-04-2016 RPIC_RS16375 17f9a9832deca9088912202e13628c21 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16375 17f9a9832deca9088912202e13628c21 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.128 T 22-04-2016 IPR022973 Ribosomal protein L10 RPIC_RS16375 17f9a9832deca9088912202e13628c21 168 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 68 138 0.009 T 22-04-2016 RPIC_RS16375 17f9a9832deca9088912202e13628c21 168 Pfam PF00466 Ribosomal protein L10 5 100 2.5E-24 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 Gene3D G3DSA:3.40.50.720 2 159 6.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PIRSF PIRSF000149 1 332 1.8E-130 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 SUPERFAMILY SSF51735 3 167 1.77E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 SUPERFAMILY SSF55347 150 313 1.34E-73 T 22-04-2016 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 Gene3D G3DSA:3.30.360.10 160 315 7.8E-81 T 22-04-2016 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 1.4E-65 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.0E-134 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 SMART SM00846 3 151 2.7E-100 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.9E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PANTHER PTHR10836 1 332 8.0E-227 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 PANTHER PTHR10836:SF31 1 332 8.0E-227 T 22-04-2016 RPIC_RS14715 bfc93c917fe7fa311512e1953f53b448 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 4.5E-62 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 Pfam PF07690 Major Facilitator Superfamily 39 324 1.1E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 PANTHER PTHR23508:SF18 25 435 1.6E-63 T 22-04-2016 RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 Gene3D G3DSA:1.20.1250.20 241 432 1.9E-16 T 22-04-2016 RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 PANTHER PTHR23508 25 435 1.6E-63 T 22-04-2016 RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 SUPERFAMILY SSF103473 22 434 2.35E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 99 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS09235 34e605c839f884d06654f50226362f4c 439 Gene3D G3DSA:1.20.1250.20 24 212 3.0E-28 T 22-04-2016 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Gene3D G3DSA:3.40.50.970 294 495 4.4E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Gene3D G3DSA:3.40.50.970 238 293 3.0E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Gene3D G3DSA:3.40.50.970 15 197 3.0E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 625 46.602 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Pfam PF02780 Transketolase, C-terminal domain 507 616 1.4E-23 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 SUPERFAMILY SSF52518 239 381 1.71E-86 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 SUPERFAMILY SSF52518 3 195 1.71E-86 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 SUPERFAMILY SSF52922 491 624 2.36E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 SMART SM00861 319 483 3.2E-71 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 PANTHER PTHR11624 237 636 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 PANTHER PTHR11624 19 214 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 1.3E-40 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 623 7.1E-262 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Gene3D G3DSA:3.40.50.920 496 623 3.5E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 SUPERFAMILY SSF52518 317 502 6.97E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 282 5.8E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 PANTHER PTHR11624:SF20 237 636 0.0 T 22-04-2016 RPIC_RS11960 b32ee6e20f17fac4301c1c3a637b54bb 636 PANTHER PTHR11624:SF20 19 214 0.0 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Gene3D G3DSA:3.90.960.10 252 390 3.8E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Gene3D G3DSA:3.40.50.800 474 573 1.0E-29 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PANTHER PTHR11451:SF3 4 244 4.8E-150 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PANTHER PTHR11451:SF3 401 574 4.8E-150 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 SUPERFAMILY SSF55681 409 480 1.25E-106 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 SUPERFAMILY SSF55681 10 237 1.25E-106 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 2.1E-230 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 SUPERFAMILY SSF55826 218 392 5.23E-36 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Gene3D G3DSA:3.30.930.10 391 473 2.1E-107 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Gene3D G3DSA:3.30.930.10 10 234 2.1E-107 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 8.3E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.1E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 7.4E-49 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 41.35 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PIRSF PIRSF001535 1 574 3.4E-271 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PANTHER PTHR11451 4 244 4.8E-150 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 PANTHER PTHR11451 401 574 4.8E-150 T 22-04-2016 RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 SUPERFAMILY SSF52954 466 573 7.7E-31 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS15080 184fe998ab90fa4ef77f7f4acc933390 574 Pfam PF03129 Anticodon binding domain 477 570 1.6E-18 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 PANTHER PTHR11082:SF29 1 290 1.2E-137 T 22-04-2016 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 PANTHER PTHR11082 1 290 1.2E-137 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 PIRSF PIRSF006621 1 321 3.9E-69 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 309 46.87 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 Gene3D G3DSA:3.20.20.70 1 235 6.5E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 294 5.8E-131 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 77 95 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 Pfam PF01207 Dihydrouridine synthase (Dus) 1 307 5.5E-79 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS05825 eaa35c25e59bf75a4251914297bfe31b 327 SUPERFAMILY SSF51395 1 296 7.99E-71 T 22-04-2016 RPIC_RS12745 98c428223872c17f0a326a8f77d3abed 223 Pfam PF02613 Nitrate reductase delta subunit 67 190 7.7E-30 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC_RS12745 98c428223872c17f0a326a8f77d3abed 223 PANTHER PTHR34227 1 221 8.0E-50 T 22-04-2016 RPIC_RS12745 98c428223872c17f0a326a8f77d3abed 223 SUPERFAMILY SSF89155 20 221 3.66E-49 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC_RS12745 98c428223872c17f0a326a8f77d3abed 223 PANTHER PTHR34227:SF4 1 221 8.0E-50 T 22-04-2016 RPIC_RS12745 98c428223872c17f0a326a8f77d3abed 223 Gene3D G3DSA:1.10.3480.10 16 222 6.8E-51 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC_RS16990 dde870e9e4db4796a952c6dc6e30fea5 139 SUPERFAMILY SSF49764 29 137 1.6E-26 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC_RS16990 dde870e9e4db4796a952c6dc6e30fea5 139 Pfam PF00011 Hsp20/alpha crystallin family 38 137 3.0E-16 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RPIC_RS16990 dde870e9e4db4796a952c6dc6e30fea5 139 PANTHER PTHR11527:SF118 34 136 1.2E-22 T 22-04-2016 RPIC_RS16990 dde870e9e4db4796a952c6dc6e30fea5 139 PANTHER PTHR11527 34 136 1.2E-22 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RPIC_RS16990 dde870e9e4db4796a952c6dc6e30fea5 139 Gene3D G3DSA:2.60.40.790 18 137 3.4E-24 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 256 277 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 1.5E-97 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 SUPERFAMILY SSF81442 43 558 9.16E-177 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 Gene3D G3DSA:1.20.210.10 39 589 9.7E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 6.8E-138 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS15605 70447218c30ecb5b16c2ce549d3a8498 658 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82714 723 806 3.01E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PANTHER PTHR32063:SF18 5 1033 0.0 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82693 573 677 3.82E-6 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Gene3D G3DSA:3.30.2090.10 723 805 7.3E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Gene3D G3DSA:3.30.2090.10 190 272 5.4E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82693 45 140 2.27E-18 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82693 141 187 8.37E-20 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Pfam PF00873 AcrB/AcrD/AcrF family 10 1022 3.3E-169 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Gene3D G3DSA:3.30.70.1430 45 144 1.9E-20 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Gene3D G3DSA:1.10.3850.10 813 1026 5.5E-49 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PANTHER PTHR32063 5 1033 0.0 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82693 275 330 8.37E-20 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82866 806 1029 6.8E-45 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Gene3D G3DSA:1.20.1640.10 292 510 2.7E-41 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82866 299 507 2.75E-33 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 Gene3D G3DSA:3.30.70.1430 574 677 2.2E-5 T 22-04-2016 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 373 394 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.9E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS09280 ffcd72ca493555b5605ce57ebbaab10f 1039 SUPERFAMILY SSF82714 190 271 6.15E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 SMART SM00357 3 67 3.1E-26 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 PANTHER PTHR11544 1 67 3.8E-28 T 22-04-2016 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 SUPERFAMILY SSF50249 1 65 3.0E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 PIRSF PIRSF002599 1 67 1.8E-21 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.4E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-13 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS06505 4de134862cfa57ab9dfc4467cd20fcae 67 Gene3D G3DSA:2.40.50.140 1 65 1.1E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 SUPERFAMILY SSF75420 3 74 6.67E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 Gene3D G3DSA:2.30.30.180 79 147 3.3E-9 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 150 20.859 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 PANTHER PTHR33867 3 147 1.7E-30 T 22-04-2016 RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 Pfam PF02576 Putative ribosome maturation factor RimP 6 146 1.2E-36 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 SUPERFAMILY SSF74942 75 150 7.72E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 PANTHER PTHR33867:SF1 3 147 1.7E-30 T 22-04-2016 RPIC_RS05545 1084a8522866b7bf05cbfafd4c126bce 162 Gene3D G3DSA:3.30.300.70 3 71 1.5E-15 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal RPIC_RS03630 283a3c0b44145db9b1f90b269f449b14 500 PANTHER PTHR35342:SF2 2 500 1.2E-296 T 22-04-2016 RPIC_RS03630 283a3c0b44145db9b1f90b269f449b14 500 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 4.6E-154 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane RPIC_RS03630 283a3c0b44145db9b1f90b269f449b14 500 PANTHER PTHR35342 2 500 1.2E-296 T 22-04-2016 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 Pfam PF09278 MerR, DNA binding 56 119 2.8E-21 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 12 137 7.3E-59 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 PANTHER PTHR30204:SF16 4 139 6.2E-57 T 22-04-2016 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 SMART SM00422 12 81 1.1E-31 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 48 68 1.4E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 1.4E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 1.4E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 PANTHER PTHR30204 4 139 6.2E-57 T 22-04-2016 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 Pfam PF00376 MerR family regulatory protein 13 50 1.4E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 Gene3D G3DSA:1.10.1660.10 13 67 4.1E-26 T 22-04-2016 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 Gene3D G3DSA:1.10.1660.10 68 141 2.8E-30 T 22-04-2016 RPIC_RS17560 9a2ef8da136723eb211d42abe460276d 152 SUPERFAMILY SSF46955 13 136 3.41E-39 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 Pfam PF00392 Bacterial regulatory proteins, gntR family 44 98 2.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 Gene3D G3DSA:3.40.640.10 163 384 2.3E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 Gene3D G3DSA:3.90.1150.10 385 477 1.8E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 PANTHER PTHR11751:SF386 110 484 9.7E-102 T 22-04-2016 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 SUPERFAMILY SSF46785 31 102 2.4E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 SUPERFAMILY SSF53383 93 489 4.62E-77 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 Pfam PF00155 Aminotransferase class I and II 162 484 6.1E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 SMART SM00345 39 98 5.2E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 72 88 2.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 72 2.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 PANTHER PTHR11751 110 484 9.7E-102 T 22-04-2016 RPIC_RS04175 622def7515ebdc3a1e02507d83d72d9d 492 Gene3D G3DSA:1.10.10.10 30 99 7.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10140 b46b79da5e82c7b497bf07c6bd84b676 351 Gene3D G3DSA:2.40.160.10 24 351 3.7E-86 T 22-04-2016 IPR023614 Porin domain RPIC_RS10140 b46b79da5e82c7b497bf07c6bd84b676 351 PRINTS PR00184 Neisseria sp. porin signature 59 84 2.7E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS10140 b46b79da5e82c7b497bf07c6bd84b676 351 PRINTS PR00184 Neisseria sp. porin signature 294 318 2.7E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS10140 b46b79da5e82c7b497bf07c6bd84b676 351 SUPERFAMILY SSF56935 24 351 4.89E-80 T 22-04-2016 RPIC_RS10140 b46b79da5e82c7b497bf07c6bd84b676 351 Pfam PF13609 Gram-negative porin 10 322 3.7E-50 T 22-04-2016 RPIC_RS06790 559db72bd222cb6c85d68a98f9476488 439 PANTHER PTHR24064 20 439 1.5E-75 T 22-04-2016 RPIC_RS06790 559db72bd222cb6c85d68a98f9476488 439 SUPERFAMILY SSF103473 8 430 1.96E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06790 559db72bd222cb6c85d68a98f9476488 439 PANTHER PTHR24064:SF234 20 439 1.5E-75 T 22-04-2016 RPIC_RS06790 559db72bd222cb6c85d68a98f9476488 439 Pfam PF07690 Major Facilitator Superfamily 27 334 1.3E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06790 559db72bd222cb6c85d68a98f9476488 439 Gene3D G3DSA:1.20.1250.20 254 428 7.7E-21 T 22-04-2016 RPIC_RS06790 559db72bd222cb6c85d68a98f9476488 439 Gene3D G3DSA:1.20.1250.20 19 199 4.9E-37 T 22-04-2016 RPIC_RS05160 1a1874fc8bba6fd68aacaa8f8da4b5c9 446 Pfam PF04966 Carbohydrate-selective porin, OprB family 63 446 6.5E-70 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC_RS00225 34070a334d45c4d92329103e322ee8ad 397 PANTHER PTHR12049 10 374 9.6E-49 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC_RS00225 34070a334d45c4d92329103e322ee8ad 397 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 85 322 1.3E-45 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA RPIC_RS00225 34070a334d45c4d92329103e322ee8ad 397 SUPERFAMILY SSF53335 23 379 2.67E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 ProSitePatterns PS00211 ABC transporters family signature. 389 403 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 SUPERFAMILY SSF52540 258 471 1.98E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 Gene3D G3DSA:3.40.50.300 2 215 2.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 Gene3D G3DSA:3.40.50.300 260 474 1.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 PANTHER PTHR24220:SF239 1 369 1.8E-149 T 22-04-2016 RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 PANTHER PTHR24220 1 369 1.8E-149 T 22-04-2016 RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 Pfam PF00005 ABC transporter 260 416 2.1E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 Pfam PF00005 ABC transporter 12 156 9.5E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 SUPERFAMILY SSF52540 2 213 5.92E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11705 81f6b1dd3e5406007a60346b80ace54b 504 SMART SM00382 20 206 8.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 9.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 9.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 9.2E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PANTHER PTHR24321 11 265 4.1E-55 T 22-04-2016 RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PANTHER PTHR24321:SF6 11 265 4.1E-55 T 22-04-2016 RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 SUPERFAMILY SSF51735 14 264 2.26E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 262 4.2E-65 T 22-04-2016 RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 247 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 3.3E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS14735 7a215784f091d4ebb21dea0a9f4605bd 269 Gene3D G3DSA:3.40.50.720 11 264 2.3E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 Gene3D G3DSA:1.20.140.10 206 389 2.3E-55 T 22-04-2016 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 PANTHER PTHR10909:SF275 23 389 5.4E-74 T 22-04-2016 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 SUPERFAMILY SSF56645 17 210 7.46E-42 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 18 109 4.6E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 PIRSF PIRSF016578 1 381 3.5E-35 T 22-04-2016 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 Gene3D G3DSA:1.10.540.10 12 106 1.5E-23 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 Gene3D G3DSA:2.40.110.10 121 205 1.8E-19 T 22-04-2016 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 PANTHER PTHR10909 23 389 5.4E-74 T 22-04-2016 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 201 3.6E-10 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 SUPERFAMILY SSF47203 230 379 1.08E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS03400 b92765299d38ee78ba4f0bd089f2fa6f 390 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 235 365 3.4E-18 T 22-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 Gene3D G3DSA:3.40.50.300 524 664 5.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 Gene3D G3DSA:3.40.50.300 437 459 5.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 PANTHER PTHR30580 10 765 2.2E-215 T 22-04-2016 RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 SUPERFAMILY SSF52540 242 292 1.38E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 SUPERFAMILY SSF52540 535 648 1.38E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 Hamap MF_00983 Probable primosomal protein N' [priA]. 22 765 23.369 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 SUPERFAMILY SSF52540 193 393 1.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 Pfam PF00270 DEAD/DEAH box helicase 240 385 1.9E-10 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 Pfam PF00271 Helicase conserved C-terminal domain 525 620 2.7E-7 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 Gene3D G3DSA:3.40.50.300 218 392 1.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 SMART SM00490 523 620 9.9E-9 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 SMART SM00487 215 418 2.7E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS17330 1f06b0a1c7441ed3fd1de6f35f6af656 765 TIGRFAM TIGR00595 priA: primosomal protein N' 243 763 8.2E-169 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PANTHER PTHR11778 1 436 6.9E-211 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.3E-163 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.084 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PRINTS PR00981 Seryl-tRNA synthetase signature 345 361 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PRINTS PR00981 Seryl-tRNA synthetase signature 363 379 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PRINTS PR00981 Seryl-tRNA synthetase signature 276 288 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PRINTS PR00981 Seryl-tRNA synthetase signature 288 301 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PRINTS PR00981 Seryl-tRNA synthetase signature 328 341 1.1E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.2E-33 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 235 411 1.1E-34 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 Gene3D G3DSA:1.10.287.40 1 104 2.0E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 SUPERFAMILY SSF55681 116 431 8.17E-102 T 22-04-2016 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 SUPERFAMILY SSF46589 1 112 1.36E-31 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 Gene3D G3DSA:3.30.930.10 105 432 1.5E-141 T 22-04-2016 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PIRSF PIRSF001529 1 437 2.2E-178 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 RPIC_RS12560 02fef7ff535733e0dfc24eab7bec00cc 438 PANTHER PTHR11778:SF0 1 436 6.9E-211 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 SUPERFAMILY SSF56024 228 399 9.2E-36 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 Gene3D G3DSA:3.30.870.10 244 409 4.3E-36 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 Gene3D G3DSA:3.30.870.10 19 187 1.1E-37 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 Pfam PF13091 PLD-like domain 38 146 5.9E-12 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 Pfam PF13091 PLD-like domain 253 372 3.6E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 PANTHER PTHR21248:SF5 15 419 2.2E-80 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 SUPERFAMILY SSF56024 14 186 7.59E-43 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 PANTHER PTHR21248 15 419 2.2E-80 T 22-04-2016 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 SMART SM00155 324 351 0.0027 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 SMART SM00155 121 148 0.009 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 RPIC_RS01690 871c5ba4a19bfcb7d46e542ef8c3a1ee 422 Hamap MF_01917 Cardiolipin synthase B [clsB]. 16 422 46.661 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 Pfam PF08676 MutL C terminal dimerisation domain 444 591 6.0E-47 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 132 4.2E-11 T 22-04-2016 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 Gene3D G3DSA:3.30.565.10 10 210 1.0E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 SMART SM01340 212 330 5.6E-58 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 SMART SM00853 448 591 1.1E-53 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 SUPERFAMILY SSF55874 9 206 6.16E-52 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 10 310 4.1E-91 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 SUPERFAMILY SSF118116 443 633 3.79E-59 T 22-04-2016 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 PANTHER PTHR10073 11 631 1.2E-158 T 22-04-2016 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 SUPERFAMILY SSF54211 195 330 3.3E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 Gene3D G3DSA:3.30.230.10 217 329 5.2E-37 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 9 631 28.453 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 213 329 2.2E-37 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RPIC_RS13970 4b9f578754c4f9d3fcf7e83d25bdf633 635 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 101 107 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 18 291 30.589 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 SUPERFAMILY SSF53223 17 117 2.99E-28 T 22-04-2016 RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 Gene3D G3DSA:3.40.50.720 124 267 8.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 21 293 7.0E-77 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 SUPERFAMILY SSF51735 118 291 8.4E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 PANTHER PTHR21089 5 301 3.1E-122 T 22-04-2016 RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 PANTHER PTHR21089:SF2 5 301 3.1E-122 T 22-04-2016 RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 105 8.5E-21 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 128 215 3.4E-9 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RPIC_RS14880 cb6f3322798b9fbb4ccd72139ce6bf0c 305 Gene3D G3DSA:3.40.192.10 17 123 1.7E-34 T 22-04-2016 RPIC_RS07685 9f642cac72628660d45b3ab3f0145e01 332 Pfam PF06406 StbA protein 141 322 9.6E-6 T 22-04-2016 IPR009440 Plasmid segregation protein ParM/StbA RPIC_RS07685 9f642cac72628660d45b3ab3f0145e01 332 SUPERFAMILY SSF53067 5 165 1.2E-26 T 22-04-2016 RPIC_RS07685 9f642cac72628660d45b3ab3f0145e01 332 Gene3D G3DSA:3.30.420.40 184 305 4.0E-4 T 22-04-2016 RPIC_RS07685 9f642cac72628660d45b3ab3f0145e01 332 TIGRFAM TIGR03739 PRTRC_D: PRTRC system protein D 7 325 8.5E-113 T 22-04-2016 IPR022389 ParB-related, ThiF-related cassette, protein D RPIC_RS07685 9f642cac72628660d45b3ab3f0145e01 332 SUPERFAMILY SSF53067 173 322 9.61E-24 T 22-04-2016 RPIC_RS07685 9f642cac72628660d45b3ab3f0145e01 332 Gene3D G3DSA:3.30.420.40 5 183 7.3E-7 T 22-04-2016 RPIC_RS04110 9679973546fbf736b673562541a7d671 558 PANTHER PTHR30003:SF0 1 558 6.0E-236 T 22-04-2016 RPIC_RS04110 9679973546fbf736b673562541a7d671 558 Pfam PF02652 L-lactate permease 15 546 2.2E-153 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIC_RS04110 9679973546fbf736b673562541a7d671 558 PANTHER PTHR30003 1 558 6.0E-236 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIC_RS04110 9679973546fbf736b673562541a7d671 558 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 548 6.7E-154 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 Pfam PF00072 Response regulator receiver domain 8 120 2.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 4.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 SUPERFAMILY SSF52172 5 139 2.56E-40 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 4.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 4.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 4.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 SMART SM00421 136 193 8.6E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 PANTHER PTHR26402 6 193 7.4E-60 T 22-04-2016 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 SUPERFAMILY SSF46894 127 199 9.52E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 Gene3D G3DSA:1.10.10.10 138 199 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 Gene3D G3DSA:3.40.50.2300 3 130 6.2E-39 T 22-04-2016 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08225 85c6adedeba0ad0227e6c05b56fe34d5 201 SMART SM00448 6 120 6.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 Pfam PF00072 Response regulator receiver domain 8 120 2.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 4.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 SUPERFAMILY SSF52172 5 139 2.56E-40 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 4.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 4.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 4.4E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 SMART SM00421 136 193 8.6E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 PANTHER PTHR26402 6 193 7.4E-60 T 22-04-2016 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 SUPERFAMILY SSF46894 127 199 9.52E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 Gene3D G3DSA:1.10.10.10 138 199 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 Gene3D G3DSA:3.40.50.2300 3 130 6.2E-39 T 22-04-2016 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS14490 85c6adedeba0ad0227e6c05b56fe34d5 201 SMART SM00448 6 120 6.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08515 ce20409ed45a16f323e6602ec70da36d 91 PANTHER PTHR33755 1 90 3.2E-13 T 22-04-2016 RPIC_RS08515 ce20409ed45a16f323e6602ec70da36d 91 SUPERFAMILY SSF143011 1 87 1.37E-5 T 22-04-2016 RPIC_RS08515 ce20409ed45a16f323e6602ec70da36d 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 1.6E-15 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 Pfam PF13458 Periplasmic binding protein 25 366 3.5E-68 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 Gene3D G3DSA:3.40.50.2300 20 147 6.2E-38 T 22-04-2016 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 Gene3D G3DSA:3.40.50.2300 302 354 6.2E-38 T 22-04-2016 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 280 293 1.6E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 PANTHER PTHR30483 6 385 9.3E-105 T 22-04-2016 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 PANTHER PTHR30483:SF13 6 385 9.3E-105 T 22-04-2016 RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 SUPERFAMILY SSF53822 25 377 1.65E-82 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS12075 111ab108b9cb8cc316fbdf0bb9d4795c 388 Gene3D G3DSA:3.40.50.2300 150 301 1.4E-19 T 22-04-2016 RPIC_RS03800 d0381d0d81f0d8f121293c258e867054 302 SUPERFAMILY SSF48179 180 287 4.99E-34 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS03800 d0381d0d81f0d8f121293c258e867054 302 Gene3D G3DSA:3.40.50.720 7 185 1.6E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03800 d0381d0d81f0d8f121293c258e867054 302 PANTHER PTHR21363:SF0 1 289 1.3E-61 T 22-04-2016 RPIC_RS03800 d0381d0d81f0d8f121293c258e867054 302 Pfam PF02153 Prephenate dehydrogenase 22 278 2.5E-71 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RPIC_RS03800 d0381d0d81f0d8f121293c258e867054 302 PANTHER PTHR21363 1 289 1.3E-61 T 22-04-2016 RPIC_RS03800 d0381d0d81f0d8f121293c258e867054 302 SUPERFAMILY SSF51735 9 175 1.14E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00540 b6f48e7f0dc1f96bf3f5ac2093fe6fc3 166 Gene3D G3DSA:3.90.960.10 12 164 6.9E-43 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS00540 b6f48e7f0dc1f96bf3f5ac2093fe6fc3 166 Pfam PF04073 Aminoacyl-tRNA editing domain 37 152 1.5E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS00540 b6f48e7f0dc1f96bf3f5ac2093fe6fc3 166 PANTHER PTHR30411 3 165 6.3E-23 T 22-04-2016 RPIC_RS00540 b6f48e7f0dc1f96bf3f5ac2093fe6fc3 166 PANTHER PTHR30411:SF1 3 165 6.3E-23 T 22-04-2016 RPIC_RS00540 b6f48e7f0dc1f96bf3f5ac2093fe6fc3 166 SUPERFAMILY SSF55826 16 162 3.4E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS12675 d983a0e942d7657637d79d1a85351833 201 SUPERFAMILY SSF47240 57 199 1.59E-37 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS12675 d983a0e942d7657637d79d1a85351833 201 Pfam PF13668 Ferritin-like domain 58 191 1.3E-33 T 22-04-2016 RPIC_RS12675 d983a0e942d7657637d79d1a85351833 201 Gene3D G3DSA:1.20.1260.10 55 194 2.9E-17 T 22-04-2016 IPR012347 Ferritin-related RPIC_RS02855 05d847b89e883c2c8d84866abb075804 325 PANTHER PTHR35007:SF1 81 325 9.4E-70 T 22-04-2016 RPIC_RS02855 05d847b89e883c2c8d84866abb075804 325 PANTHER PTHR35007 81 325 9.4E-70 T 22-04-2016 RPIC_RS02855 05d847b89e883c2c8d84866abb075804 325 Pfam PF00482 Type II secretion system (T2SS), protein F 158 283 1.7E-19 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 9.7E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 Gene3D G3DSA:1.10.357.10 2 201 1.1E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 PANTHER PTHR30055 1 212 2.0E-30 T 22-04-2016 RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 203 1.9E-39 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.2E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 SUPERFAMILY SSF48498 82 200 1.28E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC_RS18570 d30a35e0e8848eb56ddfb29a5b81f138 223 SUPERFAMILY SSF46689 2 84 3.39E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS15110 a887f7911a05ef4f6f9c5acdbbcc3a89 103 PANTHER PTHR21349 1 102 2.3E-47 T 22-04-2016 RPIC_RS15110 a887f7911a05ef4f6f9c5acdbbcc3a89 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 102 9.7E-38 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15110 a887f7911a05ef4f6f9c5acdbbcc3a89 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS15110 a887f7911a05ef4f6f9c5acdbbcc3a89 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.7E-42 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RPIC_RS15110 a887f7911a05ef4f6f9c5acdbbcc3a89 103 SUPERFAMILY SSF141091 1 102 1.31E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 RPIC_RS15110 a887f7911a05ef4f6f9c5acdbbcc3a89 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.424 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS01105 108ee7cce6b17ab2e612b8ddd464c16e 313 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site RPIC_RS01105 108ee7cce6b17ab2e612b8ddd464c16e 313 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 300 19.005 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RPIC_RS01105 108ee7cce6b17ab2e612b8ddd464c16e 313 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 299 2.5E-89 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 RPIC_RS01105 108ee7cce6b17ab2e612b8ddd464c16e 313 Pfam PF01040 UbiA prenyltransferase family 35 281 8.2E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RPIC_RS01105 108ee7cce6b17ab2e612b8ddd464c16e 313 PANTHER PTHR11048 22 303 2.0E-71 T 22-04-2016 RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 SUPERFAMILY SSF52540 5 336 3.7E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 PANTHER PTHR30486:SF6 1 346 4.2E-185 T 22-04-2016 RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 PANTHER PTHR30486 1 346 4.2E-185 T 22-04-2016 RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 Gene3D G3DSA:3.40.50.300 100 343 4.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 Pfam PF00437 Type II/IV secretion system protein 11 267 3.0E-46 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 SMART SM00382 122 256 4.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14380 0402d4cdd70eebefff1315c3b5653984 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 8.7E-151 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RPIC_RS18100 91607a2bdaaf57b6647e10946ad44533 303 PANTHER PTHR20858 3 288 9.1E-119 T 22-04-2016 RPIC_RS18100 91607a2bdaaf57b6647e10946ad44533 303 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 21 283 5.3E-93 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RPIC_RS18100 91607a2bdaaf57b6647e10946ad44533 303 SUPERFAMILY SSF53613 18 285 3.43E-77 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS18100 91607a2bdaaf57b6647e10946ad44533 303 Pfam PF08543 Phosphomethylpyrimidine kinase 28 282 8.5E-92 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 RPIC_RS18100 91607a2bdaaf57b6647e10946ad44533 303 Gene3D G3DSA:3.40.1190.20 18 283 8.6E-100 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS18100 91607a2bdaaf57b6647e10946ad44533 303 PANTHER PTHR20858:SF17 3 288 9.1E-119 T 22-04-2016 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 PANTHER PTHR24423:SF488 56 399 1.3E-82 T 22-04-2016 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 SMART SM00387 281 400 1.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 SUPERFAMILY SSF47384 167 237 5.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 PANTHER PTHR24423 56 399 1.3E-82 T 22-04-2016 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 281 399 3.3E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 Gene3D G3DSA:3.30.565.10 244 399 2.4E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 Gene3D G3DSA:3.30.450.20 56 141 2.8E-9 T 22-04-2016 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 SUPERFAMILY SSF55874 245 398 4.32E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 Gene3D G3DSA:1.10.287.130 168 234 4.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 237 6.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 SMART SM00388 176 241 3.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 380 5.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS05410 ed3218c67d5eae4eb59fad7bf1c45338 400 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 347 5.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 Gene3D G3DSA:3.40.47.10 142 193 1.4E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 Gene3D G3DSA:3.40.47.10 277 392 1.4E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 SUPERFAMILY SSF53901 271 392 2.96E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 8.4E-151 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 Gene3D G3DSA:3.40.47.10 194 276 9.6E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 Gene3D G3DSA:3.40.47.10 3 123 9.6E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 SUPERFAMILY SSF53901 3 270 2.66E-89 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 PANTHER PTHR18919:SF95 1 393 2.4E-231 T 22-04-2016 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 6.1E-108 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 PIRSF PIRSF000429 1 393 9.8E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 Pfam PF02803 Thiolase, C-terminal domain 270 392 3.5E-54 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS09395 518bf4484a8446073341af5d10ca7a88 393 PANTHER PTHR18919 1 393 2.4E-231 T 22-04-2016 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 Gene3D G3DSA:1.10.10.10 127 189 9.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 SUPERFAMILY SSF88946 3 110 4.24E-33 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 3.3E-97 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 SUPERFAMILY SSF88659 125 187 2.24E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 Pfam PF08281 Sigma-70, region 4 133 182 2.3E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 PANTHER PTHR30173 1 188 1.2E-51 T 22-04-2016 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 PANTHER PTHR30173:SF1 1 188 1.2E-51 T 22-04-2016 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 Gene3D G3DSA:1.10.1740.10 3 111 1.1E-38 T 22-04-2016 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 Pfam PF04542 Sigma-70 region 2 25 92 2.5E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS04525 176b0a459038a1f2f4c940f682954bdf 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 187 9.9E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS06565 d3c7af57d684603e8bcde9a6a4294198 293 SMART SM00849 41 226 2.2E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS06565 d3c7af57d684603e8bcde9a6a4294198 293 Pfam PF00753 Metallo-beta-lactamase superfamily 39 226 6.7E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS06565 d3c7af57d684603e8bcde9a6a4294198 293 SUPERFAMILY SSF56281 24 249 5.66E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS06565 d3c7af57d684603e8bcde9a6a4294198 293 PANTHER PTHR11935 29 293 1.0E-90 T 22-04-2016 RPIC_RS06565 d3c7af57d684603e8bcde9a6a4294198 293 PANTHER PTHR11935:SF5 29 293 1.0E-90 T 22-04-2016 RPIC_RS06565 d3c7af57d684603e8bcde9a6a4294198 293 Gene3D G3DSA:3.60.15.10 28 253 1.0E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 SUPERFAMILY SSF100934 508 619 2.94E-36 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:3.30.30.30 74 109 5.7E-7 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PANTHER PTHR19375:SF176 19 609 8.9E-268 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 45.135 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PANTHER PTHR19375 19 609 8.9E-268 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:1.20.1270.10 532 619 9.4E-32 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:3.30.420.40 317 359 3.7E-30 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:3.30.420.40 205 237 3.7E-30 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:3.30.420.40 132 204 2.7E-54 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:3.30.420.40 20 73 2.7E-54 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:2.60.34.10 391 531 2.2E-51 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 SUPERFAMILY SSF100920 388 539 6.54E-48 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 470 486 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 151 171 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 48 60 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 389 408 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 20 33 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 210 220 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 363 383 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 PRINTS PR00301 70kDa heat shock protein signature 332 348 3.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Pfam PF00012 Hsp70 protein 21 602 1.9E-180 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 SUPERFAMILY SSF53067 199 379 2.66E-49 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 SUPERFAMILY SSF53067 19 195 4.66E-54 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 Gene3D G3DSA:3.90.640.10 238 313 2.9E-7 T 22-04-2016 RPIC_RS04370 36f42aaec7eaa6116375ef3f31b5b69e 621 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 619 4.3E-287 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 Gene3D G3DSA:3.40.50.980 29 230 3.4E-37 T 22-04-2016 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 PANTHER PTHR24095 15 563 9.0E-201 T 22-04-2016 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 6.9E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 Gene3D G3DSA:3.40.50.980 231 376 1.2E-47 T 22-04-2016 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 Gene3D G3DSA:2.30.38.10 384 458 8.4E-27 T 22-04-2016 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 SUPERFAMILY SSF56801 20 561 2.75E-159 T 22-04-2016 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 Pfam PF00501 AMP-binding enzyme 36 465 5.4E-105 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 ProSitePatterns PS00455 Putative AMP-binding domain signature. 216 227 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS01555 e7e0b33582a68c1e6edf6c256660fcf5 571 Gene3D G3DSA:3.30.300.30 462 562 7.7E-35 T 22-04-2016 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.545 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.2E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.2E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.2E-14 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 Pfam PF01632 Ribosomal protein L35 2 62 6.7E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 PANTHER PTHR33343 1 65 4.2E-20 T 22-04-2016 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 5.4E-24 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RPIC_RS09710 0b47aaf06d05f02fea639510b3d43207 65 SUPERFAMILY SSF143034 2 64 1.44E-21 T 22-04-2016 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Gene3D G3DSA:1.10.8.60 666 749 2.9E-27 T 22-04-2016 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Gene3D G3DSA:1.10.8.60 352 430 7.3E-30 T 22-04-2016 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.1E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 647 2.5E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 SMART SM00382 207 351 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 SMART SM00382 488 664 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 PANTHER PTHR11638 1 762 0.0 T 22-04-2016 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 PANTHER PTHR11638:SF111 1 762 0.0 T 22-04-2016 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 SMART SM01086 654 746 3.2E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 2.4E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 SUPERFAMILY SSF52540 169 422 3.12E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Gene3D G3DSA:3.40.50.300 443 665 3.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 SUPERFAMILY SSF52540 438 740 2.87E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 SUPERFAMILY SSF81923 1 143 2.62E-57 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Gene3D G3DSA:3.40.50.300 170 350 4.5E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Gene3D G3DSA:1.10.1780.10 1 143 6.2E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 324 1.9E-11 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RPIC_RS13465 4ef426ce65629b05e8c68b77107529cc 762 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.7E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 PANTHER PTHR33694:SF1 10 292 4.2E-58 T 22-04-2016 RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 Gene3D G3DSA:3.30.230.20 9 132 1.8E-39 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 SUPERFAMILY SSF54211 141 286 8.34E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 Gene3D G3DSA:3.30.1700.10 136 291 6.0E-31 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 PANTHER PTHR33694 10 292 4.2E-58 T 22-04-2016 RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 SUPERFAMILY SSF54211 9 133 2.28E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS05685 24ec6e7043671ed7b69707de86905eb1 297 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 10 284 3.5E-73 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 RPIC_RS08675 071db6c3e260aa9127986a73dfda0a08 152 Pfam PF02308 MgtC family 28 148 2.4E-37 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS08675 071db6c3e260aa9127986a73dfda0a08 152 PRINTS PR01837 MgtC/SapB protein signature 50 68 4.3E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS08675 071db6c3e260aa9127986a73dfda0a08 152 PRINTS PR01837 MgtC/SapB protein signature 31 50 4.3E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS08675 071db6c3e260aa9127986a73dfda0a08 152 PRINTS PR01837 MgtC/SapB protein signature 77 99 4.3E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS08675 071db6c3e260aa9127986a73dfda0a08 152 PRINTS PR01837 MgtC/SapB protein signature 106 130 4.3E-40 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 RPIC_RS08675 071db6c3e260aa9127986a73dfda0a08 152 PANTHER PTHR33778 1 149 2.2E-46 T 22-04-2016 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.321 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 Pfam PF01192 RNA polymerase Rpb6 8 58 1.4E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 Gene3D G3DSA:3.90.940.10 1 64 9.2E-12 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 SMART SM01409 8 59 2.5E-15 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 2.7E-17 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 PANTHER PTHR34476 2 62 1.1E-15 T 22-04-2016 RPIC_RS11210 aa366944171087db718a5b0d183bbf50 67 SUPERFAMILY SSF63562 1 63 1.44E-20 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000 411 619 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000 1 376 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 613 44.686 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000:SF11 411 619 0.0 T 22-04-2016 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 PANTHER PTHR21000:SF11 1 376 0.0 T 22-04-2016 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 514 525 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 Pfam PF00920 Dehydratase family 34 610 9.2E-220 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 SUPERFAMILY SSF143975 4 425 3.92E-136 T 22-04-2016 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 613 1.5E-256 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13275 0c8298b783e0d387cb63cef109bb7efb 619 SUPERFAMILY SSF52016 426 614 1.8E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 Pfam PF12482 Phage integrase protein 6 96 2.8E-29 T 22-04-2016 IPR022169 Protein of unknown function DUF3701 RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 Pfam PF00589 Phage integrase family 283 455 2.2E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 SUPERFAMILY SSF56349 129 456 2.91E-32 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 Gene3D G3DSA:1.10.150.130 140 242 1.2E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 Gene3D G3DSA:1.10.443.10 284 457 1.7E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 PANTHER PTHR30349 208 470 4.7E-22 T 22-04-2016 RPIC_RS08560 e6ea3bcd3da6c757f2d9d267e749b1d2 470 PANTHER PTHR30349 133 184 4.7E-22 T 22-04-2016 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 302 3.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 SMART SM00388 237 303 4.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 SMART SM00387 346 458 1.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 PANTHER PTHR24423:SF354 177 460 2.9E-102 T 22-04-2016 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 SUPERFAMILY SSF55874 292 456 3.27E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 3 455 1.6E-136 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 Gene3D G3DSA:1.10.287.130 227 299 1.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 411 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 Gene3D G3DSA:3.30.565.10 309 458 2.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 Pfam PF00672 HAMP domain 164 232 6.6E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 SUPERFAMILY SSF47384 220 302 4.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 456 3.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 PANTHER PTHR24423 177 460 2.9E-102 T 22-04-2016 RPIC_RS08735 b7aed2f861954ad8438d803f4fb4b967 465 SMART SM00304 183 236 3.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 52 306 1.1E-63 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 SUPERFAMILY SSF50249 18 74 4.03E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 Gene3D G3DSA:2.40.50.140 17 71 4.0E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 PANTHER PTHR32120:SF2 19 314 4.9E-95 T 22-04-2016 RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 17 313 35.04 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 Pfam PF03193 Protein of unknown function, DUF258 72 248 1.2E-48 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 SUPERFAMILY SSF52540 87 313 2.21E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 Gene3D G3DSA:3.40.50.300 86 248 1.5E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 PANTHER PTHR32120 19 314 4.9E-95 T 22-04-2016 RPIC_RS03975 5ec14f1fa707ec5cd7b6688586fe6b53 315 Gene3D G3DSA:1.10.40.50 250 314 2.2E-22 T 22-04-2016 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 PANTHER PTHR23132 19 318 9.6E-91 T 22-04-2016 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Pfam PF07478 D-ala D-ala ligase C-terminus 119 314 4.3E-58 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 260 289 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 18 319 34.484 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 SUPERFAMILY SSF52440 19 111 7.29E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Gene3D G3DSA:3.30.1490.20 122 188 4.7E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Gene3D G3DSA:3.40.50.20 19 99 2.6E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Pfam PF01820 D-ala D-ala ligase N-terminus 19 101 1.3E-20 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Gene3D G3DSA:3.30.470.20 189 315 5.4E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 Gene3D G3DSA:3.30.470.20 100 118 5.4E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 19 318 2.2E-96 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 78 89 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15215 d47472ee9f7425a18baa52f780ce6b5b 331 SUPERFAMILY SSF56059 111 322 3.89E-56 T 22-04-2016 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 SUPERFAMILY SSF54292 2 76 5.11E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 SUPERFAMILY SSF47741 83 151 3.14E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 PANTHER PTHR11908 1 133 9.8E-30 T 22-04-2016 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 Pfam PF01799 [2Fe-2S] binding domain 71 144 8.9E-25 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 57 1.1E-7 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 Gene3D G3DSA:1.10.150.120 73 152 6.1E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10285 b197c42c6ca9ec7a9c044fb1901551f4 155 Gene3D G3DSA:3.10.20.30 2 72 9.4E-31 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 18 281 1.0E-129 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 Gene3D G3DSA:1.10.3720.10 26 282 2.6E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 PANTHER PTHR30406 10 286 7.0E-165 T 22-04-2016 RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 PANTHER PTHR30406:SF6 10 286 7.0E-165 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 SUPERFAMILY SSF161098 24 275 1.5E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 282 3.5E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06065 de5b62a72f19bfc208871d76d2e3562f 304 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 16 277 7.9E-101 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RPIC_RS10725 da63432499cca93f8f13a0517e444b73 229 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 229 29.839 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RPIC_RS10725 da63432499cca93f8f13a0517e444b73 229 Pfam PF01730 UreF 38 184 2.9E-37 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RPIC_RS10725 da63432499cca93f8f13a0517e444b73 229 PIRSF PIRSF009467 3 229 1.2E-64 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RPIC_RS10725 da63432499cca93f8f13a0517e444b73 229 PANTHER PTHR33620 1 229 3.2E-34 T 22-04-2016 RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 PANTHER PTHR24220:SF564 5 211 1.8E-98 T 22-04-2016 RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 Gene3D G3DSA:3.40.50.300 3 219 1.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 PANTHER PTHR24220 5 211 1.8E-98 T 22-04-2016 RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 Pfam PF00005 ABC transporter 25 163 5.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 SUPERFAMILY SSF52540 5 224 3.41E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14210 46971108fdb8f613f86aa78f1083ff38 263 SMART SM00382 33 213 1.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13190 53c606c5b087c78f8244647ede2cd55c 142 Gene3D G3DSA:3.40.50.10110 1 138 2.3E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RPIC_RS13190 53c606c5b087c78f8244647ede2cd55c 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 6.4E-38 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RPIC_RS13190 53c606c5b087c78f8244647ede2cd55c 142 PANTHER PTHR38767 7 142 8.4E-20 T 22-04-2016 RPIC_RS13190 53c606c5b087c78f8244647ede2cd55c 142 SUPERFAMILY SSF102400 1 139 8.89E-41 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 11 399 5.8E-141 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 Gene3D G3DSA:3.90.1150.10 310 400 2.3E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 Gene3D G3DSA:3.90.1150.10 13 60 2.3E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 PANTHER PTHR11986 10 407 3.8E-186 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 Pfam PF00202 Aminotransferase class-III 17 399 7.4E-109 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 225 262 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 PANTHER PTHR11986:SF18 10 407 3.8E-186 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 SUPERFAMILY SSF53383 12 399 8.81E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS00245 15d99d63a10cc6232ede7db82c9b5b5b 408 Gene3D G3DSA:3.40.640.10 61 307 5.5E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 Pfam PF01479 S4 domain 98 144 4.9E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 SMART SM01390 3 96 7.4E-47 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 SMART SM00363 97 161 7.4E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 SUPERFAMILY SSF55174 2 207 3.27E-67 T 22-04-2016 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.094 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 Gene3D G3DSA:1.10.1050.10 2 102 1.2E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 6.3E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 Gene3D G3DSA:3.10.290.10 103 191 1.4E-31 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 PANTHER PTHR11831:SF4 1 207 2.0E-87 T 22-04-2016 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 6.2E-79 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS16155 d2b86c57a1464d12de6cc294e7fcbd5e 207 PANTHER PTHR11831 1 207 2.0E-87 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 RPIC_RS02450 92a408f7d6feb800fdb9370fd6d51758 175 SUPERFAMILY SSF52540 8 123 4.84E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02450 92a408f7d6feb800fdb9370fd6d51758 175 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 8 140 1.1E-44 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RPIC_RS02450 92a408f7d6feb800fdb9370fd6d51758 175 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 8 167 1.8E-40 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RPIC_RS02450 92a408f7d6feb800fdb9370fd6d51758 175 PANTHER PTHR40072:SF2 6 119 9.2E-25 T 22-04-2016 RPIC_RS02450 92a408f7d6feb800fdb9370fd6d51758 175 PANTHER PTHR40072 6 119 9.2E-25 T 22-04-2016 RPIC_RS02450 92a408f7d6feb800fdb9370fd6d51758 175 Gene3D G3DSA:3.40.50.300 7 170 3.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 194 9.9E-63 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 SUPERFAMILY SSF50022 34 192 4.55E-37 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 Gene3D G3DSA:2.102.10.10 13 197 1.8E-38 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 PRINTS PR00162 Rieske 2Fe-2S subunit signature 122 133 1.1E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 PRINTS PR00162 Rieske 2Fe-2S subunit signature 153 165 1.1E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 PRINTS PR00162 Rieske 2Fe-2S subunit signature 166 178 1.1E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 Pfam PF00355 Rieske [2Fe-2S] domain 117 181 1.2E-9 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 PANTHER PTHR10134 14 198 3.1E-73 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 13 43 3.0E-8 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIC_RS08800 e7995b106671836bd63d0235adfc384e 201 PANTHER PTHR10134:SF8 14 198 3.1E-73 T 22-04-2016 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 Gene3D G3DSA:3.40.50.2300 55 172 3.9E-56 T 22-04-2016 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 Pfam PF13377 Periplasmic binding protein-like domain 169 336 1.1E-38 T 22-04-2016 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 Gene3D G3DSA:3.40.50.2300 173 308 7.2E-54 T 22-04-2016 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 SMART SM00354 1 71 1.2E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 SUPERFAMILY SSF47413 1 59 2.11E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 PANTHER PTHR30146 1 343 1.3E-134 T 22-04-2016 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 SUPERFAMILY SSF53822 60 339 1.16E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 Gene3D G3DSA:1.10.260.40 2 54 7.7E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 PANTHER PTHR30146:SF30 1 343 1.3E-134 T 22-04-2016 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS04320 2779f37da71ec14c0d654a66c6a4c55d 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS11300 8aa49145ddc277ab5d13bd991fdce4ea 188 Gene3D G3DSA:2.60.120.330 10 187 5.7E-49 T 22-04-2016 IPR027443 Isopenicillin N synthase-like RPIC_RS11300 8aa49145ddc277ab5d13bd991fdce4ea 188 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 85 185 6.0E-17 T 22-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 RPIC_RS11300 8aa49145ddc277ab5d13bd991fdce4ea 188 SUPERFAMILY SSF51197 1 188 9.06E-46 T 22-04-2016 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 Gene3D G3DSA:1.20.1250.20 250 434 4.2E-21 T 22-04-2016 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 Gene3D G3DSA:1.20.1250.20 22 230 2.9E-21 T 22-04-2016 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 Pfam PF00083 Sugar (and other) transporter 27 236 2.9E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 Pfam PF07690 Major Facilitator Superfamily 276 433 2.0E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 PANTHER PTHR23508 18 438 2.9E-204 T 22-04-2016 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 SUPERFAMILY SSF103473 21 435 7.32E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 ProSitePatterns PS00216 Sugar transport proteins signature 1. 306 322 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 PANTHER PTHR23508:SF16 18 438 2.9E-204 T 22-04-2016 RPIC_RS15285 50c59c9679ee2f06d59b01b40d84a80d 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 32 423 1.9E-135 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 Gene3D G3DSA:1.10.1660.10 56 128 1.1E-28 T 22-04-2016 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 9.3E-51 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 PANTHER PTHR30204:SF16 1 128 8.4E-48 T 22-04-2016 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.5E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.5E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.5E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 SUPERFAMILY SSF46955 1 125 7.33E-37 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 Pfam PF00376 MerR family regulatory protein 2 39 1.7E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 SMART SM00422 1 70 1.0E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 Gene3D G3DSA:1.10.1660.10 1 55 8.3E-25 T 22-04-2016 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 PANTHER PTHR30204 1 128 8.4E-48 T 22-04-2016 RPIC_RS08855 20ed3181dd36e9f6b3a87cd90f15109b 142 Pfam PF09278 MerR, DNA binding 45 106 1.2E-18 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 Pfam PF00593 TonB dependent receptor 406 620 5.1E-28 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 Gene3D G3DSA:2.40.170.20 174 621 5.1E-77 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 SUPERFAMILY SSF56935 43 620 1.73E-103 T 22-04-2016 RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 1.8E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 PANTHER PTHR30069:SF10 23 168 2.1E-35 T 22-04-2016 RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 Gene3D G3DSA:2.170.130.10 35 166 3.3E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS13135 4f1984a3a500d9612a51dbf2d35fcb5c 627 PANTHER PTHR30069 23 168 2.1E-35 T 22-04-2016 RPIC_RS18140 59fc7adf28c30627044b00c3fbe61c07 276 PANTHER PTHR21091 133 276 6.2E-40 T 22-04-2016 RPIC_RS18140 59fc7adf28c30627044b00c3fbe61c07 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 5.7E-102 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RPIC_RS18140 59fc7adf28c30627044b00c3fbe61c07 276 Gene3D G3DSA:3.20.20.220 3 276 2.3E-109 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC_RS18140 59fc7adf28c30627044b00c3fbe61c07 276 PANTHER PTHR21091:SF31 133 276 6.2E-40 T 22-04-2016 RPIC_RS18140 59fc7adf28c30627044b00c3fbe61c07 276 SUPERFAMILY SSF51730 4 275 1.2E-98 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC_RS18140 59fc7adf28c30627044b00c3fbe61c07 276 Pfam PF02219 Methylenetetrahydrofolate reductase 4 275 4.3E-90 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 Pfam PF00701 Dihydrodipicolinate synthetase family 14 297 1.2E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 PIRSF PIRSF001365 9 311 3.6E-49 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 SUPERFAMILY SSF51569 11 307 1.15E-64 T 22-04-2016 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 PANTHER PTHR12128:SF29 1 313 1.7E-124 T 22-04-2016 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 PANTHER PTHR12128 1 313 1.7E-124 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 Gene3D G3DSA:3.20.20.70 9 308 2.9E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS14805 9700175c127f9f1fb96cde416cc43548 313 SMART SM01130 12 305 7.1E-61 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02530 c8661b225cc3bcf90259ac622b204f00 377 PANTHER PTHR30483:SF7 1 376 1.1E-131 T 22-04-2016 RPIC_RS02530 c8661b225cc3bcf90259ac622b204f00 377 Pfam PF13458 Periplasmic binding protein 22 357 7.3E-42 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS02530 c8661b225cc3bcf90259ac622b204f00 377 PANTHER PTHR30483 1 376 1.1E-131 T 22-04-2016 RPIC_RS02530 c8661b225cc3bcf90259ac622b204f00 377 Gene3D G3DSA:3.40.50.2300 22 212 5.6E-38 T 22-04-2016 RPIC_RS02530 c8661b225cc3bcf90259ac622b204f00 377 SUPERFAMILY SSF53822 22 376 2.8E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 Pfam PF03167 Uracil DNA glycosylase superfamily 84 246 3.8E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 87 96 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 SMART SM00987 79 247 2.0E-35 T 22-04-2016 RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 SMART SM00986 79 247 2.0E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 36 258 37.28 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 Gene3D G3DSA:3.40.470.10 29 257 2.4E-86 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 38 251 1.4E-70 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 PANTHER PTHR11264 8 260 2.1E-107 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 RPIC_RS15450 e384e8e67a0dd90f1acff372934052f1 263 SUPERFAMILY SSF52141 35 257 2.8E-77 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 PIRSF PIRSF001488 1 217 8.5E-49 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 SUPERFAMILY SSF52833 26 208 5.51E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 PANTHER PTHR35891 2 217 2.3E-44 T 22-04-2016 RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 Gene3D G3DSA:3.40.30.10 24 212 3.0E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 PANTHER PTHR35891:SF2 2 217 2.3E-44 T 22-04-2016 RPIC_RS00650 8946ef1577445a605cc4b2ac22f349e8 218 Pfam PF01323 DSBA-like thioredoxin domain 115 195 4.8E-11 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC_RS17990 e138f92a0a570299bd408f8e934616b8 147 Gene3D G3DSA:3.10.129.10 7 137 5.0E-34 T 22-04-2016 IPR029069 HotDog domain RPIC_RS17990 e138f92a0a570299bd408f8e934616b8 147 SUPERFAMILY SSF54637 17 137 1.86E-29 T 22-04-2016 IPR029069 HotDog domain RPIC_RS17990 e138f92a0a570299bd408f8e934616b8 147 Pfam PF03061 Thioesterase superfamily 26 102 1.5E-10 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS17990 e138f92a0a570299bd408f8e934616b8 147 PANTHER PTHR31793 1 147 8.0E-27 T 22-04-2016 RPIC_RS11040 634e506b05cae32c7d55bd3505b8d53d 282 Gene3D G3DSA:3.40.190.10 194 276 5.3E-24 T 22-04-2016 RPIC_RS11040 634e506b05cae32c7d55bd3505b8d53d 282 Gene3D G3DSA:3.40.190.10 21 158 5.5E-35 T 22-04-2016 RPIC_RS11040 634e506b05cae32c7d55bd3505b8d53d 282 PANTHER PTHR37945 29 279 4.2E-95 T 22-04-2016 RPIC_RS11040 634e506b05cae32c7d55bd3505b8d53d 282 SUPERFAMILY SSF53850 28 262 1.95E-29 T 22-04-2016 RPIC_RS11040 634e506b05cae32c7d55bd3505b8d53d 282 Pfam PF12849 PBP superfamily domain 28 252 5.2E-26 T 22-04-2016 IPR024370 PBP domain RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 5.6E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 PANTHER PTHR26402:SF151 2 209 8.3E-70 T 22-04-2016 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 SUPERFAMILY SSF52172 1 133 1.12E-36 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 SMART SM00421 146 203 5.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 Pfam PF00072 Response regulator receiver domain 4 116 1.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 SMART SM00448 2 115 1.9E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 SUPERFAMILY SSF46894 140 209 6.46E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 PANTHER PTHR26402 2 209 8.3E-70 T 22-04-2016 RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 Gene3D G3DSA:1.10.10.10 120 209 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00700 35d36e952bbe0aaeccfa1bf4e45e7bc4 210 Gene3D G3DSA:3.40.50.2300 1 119 6.4E-38 T 22-04-2016 RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 Pfam PF00005 ABC transporter 19 167 1.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 Gene3D G3DSA:3.40.50.300 4 241 1.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 PANTHER PTHR24220 5 260 3.1E-122 T 22-04-2016 RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 SUPERFAMILY SSF52540 4 247 8.18E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 SMART SM00382 28 217 4.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15875 2a0e5557a19cbba2dbe0881ea6046377 361 PANTHER PTHR24220:SF524 5 260 3.1E-122 T 22-04-2016 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 280 286 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 PANTHER PTHR30408:SF4 77 457 1.9E-100 T 22-04-2016 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 Pfam PF02384 N-6 DNA Methylase 151 458 9.2E-97 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 Gene3D G3DSA:3.40.50.150 176 400 2.4E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 SUPERFAMILY SSF53335 11 493 2.99E-137 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 PANTHER PTHR30408 77 457 1.9E-100 T 22-04-2016 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 Pfam PF12161 HsdM N-terminal domain 13 139 2.0E-25 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 277 289 1.7E-15 T 22-04-2016 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 174 190 1.7E-15 T 22-04-2016 RPIC_RS15680 9daa92ca9abbae9f4d94c8cc10e4a88c 500 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 198 212 1.7E-15 T 22-04-2016 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 Gene3D G3DSA:3.20.20.10 13 207 8.7E-67 T 22-04-2016 IPR029066 PLP-binding barrel RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 SUPERFAMILY SSF50621 227 358 1.43E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 Hamap MF_01201 Alanine racemase. 2 360 33.691 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 Pfam PF01168 Alanine racemase, N-terminal domain 10 217 5.2E-68 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PANTHER PTHR30511:SF0 1 365 5.3E-128 T 22-04-2016 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PANTHER PTHR30511 1 365 5.3E-128 T 22-04-2016 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 SUPERFAMILY SSF51419 9 233 5.09E-62 T 22-04-2016 IPR029066 PLP-binding barrel RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 TIGRFAM TIGR00492 alr: alanine racemase 4 357 7.7E-110 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 Gene3D G3DSA:2.40.37.10 208 357 2.5E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 248 263 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 27 43 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 265 280 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 342 355 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 190 217 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 121 133 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 155 166 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 PRINTS PR00992 Alanine racemase signature 61 79 2.0E-60 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 SMART SM01005 232 360 2.8E-67 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 Pfam PF00842 Alanine racemase, C-terminal domain 232 357 5.1E-38 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS06180 bda52d5faddfd9d536e64af97a0c08d5 374 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS14260 db531da74883323afa42c829d2cbec00 1426 PANTHER PTHR38690 50 362 2.1E-118 T 22-04-2016 RPIC_RS14260 db531da74883323afa42c829d2cbec00 1426 PANTHER PTHR38690 388 684 2.1E-118 T 22-04-2016 RPIC_RS14260 db531da74883323afa42c829d2cbec00 1426 PANTHER PTHR38690 701 1426 2.1E-118 T 22-04-2016 RPIC_RS14260 db531da74883323afa42c829d2cbec00 1426 Pfam PF13502 AsmA-like C-terminal region 1155 1407 1.3E-57 T 22-04-2016 IPR032712 AsmA-like, C-terminal RPIC_RS14260 db531da74883323afa42c829d2cbec00 1426 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 56 1413 2.8E-203 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 RPIC_RS14260 db531da74883323afa42c829d2cbec00 1426 Pfam PF13116 Protein of unknown function 616 912 1.2E-60 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 Gene3D G3DSA:2.40.30.10 4 97 6.5E-31 T 22-04-2016 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PANTHER PTHR19370:SF98 4 257 1.4E-120 T 22-04-2016 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 SUPERFAMILY SSF63380 6 99 1.42E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 6.5E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 Pfam PF00175 Oxidoreductase NAD-binding domain 113 230 3.6E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 51 58 6.6E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 6.6E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 6.6E-5 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 SUPERFAMILY SSF52343 102 256 4.19E-41 T 22-04-2016 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 Gene3D G3DSA:3.40.50.80 98 257 3.2E-46 T 22-04-2016 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 1.3E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS05860 4432070498e055d4cc69f88fe3d61165 258 PANTHER PTHR19370 4 257 1.4E-120 T 22-04-2016 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 PANTHER PTHR11907 1 479 2.1E-246 T 22-04-2016 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 SUPERFAMILY SSF56235 2 259 4.8E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 Pfam PF00156 Phosphoribosyl transferase domain 281 394 1.1E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 PANTHER PTHR11907:SF0 1 479 2.1E-246 T 22-04-2016 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 PIRSF PIRSF000485 1 482 4.2E-156 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 SUPERFAMILY SSF53271 252 484 4.59E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 Gene3D G3DSA:3.60.20.10 2 259 7.0E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 44.454 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 Gene3D G3DSA:3.40.50.2020 273 444 4.0E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 2.0E-155 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 RPIC_RS10475 12f5bdd947c2321f519e9ffdf41bb565 511 Pfam PF13522 Glutamine amidotransferase domain 65 202 2.5E-15 T 22-04-2016 RPIC_RS08520 5d480ae421d6bfc588ff13339d8907a4 87 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 46 1.2E-10 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 RPIC_RS08520 5d480ae421d6bfc588ff13339d8907a4 87 PANTHER PTHR40688:SF1 1 86 1.8E-28 T 22-04-2016 RPIC_RS08520 5d480ae421d6bfc588ff13339d8907a4 87 SUPERFAMILY SSF47598 6 48 2.56E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RPIC_RS08520 5d480ae421d6bfc588ff13339d8907a4 87 PANTHER PTHR40688 1 86 1.8E-28 T 22-04-2016 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 Gene3D G3DSA:1.10.10.10 185 257 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 PANTHER PTHR24567:SF28 30 257 5.4E-51 T 22-04-2016 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 SUPERFAMILY SSF51206 38 177 1.57E-20 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 PANTHER PTHR24567 30 257 5.4E-51 T 22-04-2016 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 SMART SM00100 45 165 0.0013 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 Gene3D G3DSA:2.60.120.10 34 184 7.1E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 Pfam PF13545 Crp-like helix-turn-helix domain 183 255 2.5E-19 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 SUPERFAMILY SSF46785 180 258 1.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 207 223 3.0E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 223 238 3.0E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 SMART SM00419 201 249 3.4E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS12375 3951cba9055898b010dbdf92fa0f7b1a 274 Pfam PF00027 Cyclic nucleotide-binding domain 66 148 3.1E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 315 5.9E-24 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 Gene3D G3DSA:3.40.50.1370 17 162 1.3E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 SUPERFAMILY SSF53671 16 321 5.37E-96 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 17 163 1.7E-37 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.4E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 Gene3D G3DSA:3.40.50.1370 163 297 5.2E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 17 318 9.0E-94 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PANTHER PTHR11405 9 322 2.5E-124 T 22-04-2016 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 2.2E-17 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 16 321 41.039 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03030 a94decc427e2796e5fb3d175a0f25777 323 PANTHER PTHR11405:SF16 9 322 2.5E-124 T 22-04-2016 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 Gene3D G3DSA:3.20.20.120 128 424 3.3E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 SMART SM01193 4 134 2.6E-96 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 Pfam PF03952 Enolase, N-terminal domain 4 133 1.0E-59 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 SUPERFAMILY SSF51604 139 426 2.69E-130 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PRINTS PR00148 Enolase signature 334 348 5.54E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PRINTS PR00148 Enolase signature 161 174 5.54E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PRINTS PR00148 Enolase signature 37 51 5.54E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PRINTS PR00148 Enolase signature 363 380 5.54E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PRINTS PR00148 Enolase signature 311 322 5.54E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PRINTS PR00148 Enolase signature 107 123 5.54E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PIRSF PIRSF001400 1 425 3.2E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 424 7.3E-134 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 SUPERFAMILY SSF54826 4 136 1.68E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 Hamap MF_00318 Enolase [eno]. 2 411 45.127 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 Gene3D G3DSA:3.30.390.10 4 126 1.0E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 PANTHER PTHR11902 1 427 2.7E-262 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 4.8E-211 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS04800 1224f21e3ea26b35e1a35ad4444b6347 427 SMART SM01192 139 425 1.1E-224 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 RPIC_RS03810 6bd2091d4b5de96bb0246cd276c1a803 231 Pfam PF02224 Cytidylate kinase 13 221 7.3E-74 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RPIC_RS03810 6bd2091d4b5de96bb0246cd276c1a803 231 PANTHER PTHR21299 11 231 2.8E-64 T 22-04-2016 RPIC_RS03810 6bd2091d4b5de96bb0246cd276c1a803 231 SUPERFAMILY SSF52540 8 223 1.84E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03810 6bd2091d4b5de96bb0246cd276c1a803 231 TIGRFAM TIGR00017 cmk: cytidylate kinase 11 219 5.2E-73 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RPIC_RS03810 6bd2091d4b5de96bb0246cd276c1a803 231 Gene3D G3DSA:3.40.50.300 11 222 8.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03810 6bd2091d4b5de96bb0246cd276c1a803 231 Hamap MF_00238 Cytidylate kinase [cmk]. 11 225 32.314 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 SUPERFAMILY SSF111369 146 340 4.32E-14 T 22-04-2016 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 PANTHER PTHR30097:SF3 36 428 2.7E-88 T 22-04-2016 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 125 336 1.6E-75 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 Gene3D G3DSA:2.40.50.100 230 262 7.6E-6 T 22-04-2016 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 Gene3D G3DSA:2.40.50.100 145 176 7.6E-6 T 22-04-2016 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 PANTHER PTHR30097 36 428 2.7E-88 T 22-04-2016 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 183 410 8.2E-40 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS08095 a3a91b6d1ab2a367d46df42d1eb32ded 516 Pfam PF11604 Copper binding periplasmic protein CusF 442 507 5.6E-19 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Gene3D G3DSA:3.40.250.10 370 469 2.5E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 PANTHER PTHR12231 253 397 1.8E-19 T 22-04-2016 RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 PANTHER PTHR12231 19 28 1.8E-19 T 22-04-2016 RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SUPERFAMILY SSF52821 255 354 2.1E-23 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SUPERFAMILY SSF52821 3 123 1.31E-25 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Gene3D G3DSA:3.40.250.10 120 233 9.4E-20 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Gene3D G3DSA:3.40.250.10 255 361 5.2E-18 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SMART SM00450 129 227 2.5E-7 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SMART SM00450 6 103 2.7E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SMART SM00450 266 362 6.4E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SMART SM00450 373 467 1.3 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Gene3D G3DSA:3.40.250.10 3 114 1.2E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SUPERFAMILY SSF52821 370 518 5.76E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Pfam PF00581 Rhodanese-like domain 276 354 1.2E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Pfam PF00581 Rhodanese-like domain 129 223 9.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 Pfam PF00581 Rhodanese-like domain 7 99 3.9E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 PANTHER PTHR12231:SF83 253 397 1.8E-19 T 22-04-2016 RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 PANTHER PTHR12231:SF83 19 28 1.8E-19 T 22-04-2016 RPIC_RS05605 c67f92ad1fa1ec5352ac4cde521631d6 529 SUPERFAMILY SSF52821 104 233 1.07E-30 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 Gene3D G3DSA:3.90.1150.10 288 404 8.5E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 403 1.3E-145 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 PANTHER PTHR13693:SF53 1 411 3.1E-156 T 22-04-2016 RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 Gene3D G3DSA:3.40.640.10 63 287 5.7E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 SUPERFAMILY SSF53383 30 408 8.16E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 406 50.575 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 PANTHER PTHR13693 1 411 3.1E-156 T 22-04-2016 RPIC_RS06805 376b6fba5f8e772369aa7a93983eb889 415 Pfam PF00155 Aminotransferase class I and II 45 402 1.3E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS00525 3239288d7697503898f39298d3143054 225 PANTHER PTHR30055 25 217 8.2E-31 T 22-04-2016 RPIC_RS00525 3239288d7697503898f39298d3143054 225 Gene3D G3DSA:1.10.357.10 87 218 8.5E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS00525 3239288d7697503898f39298d3143054 225 PANTHER PTHR30055:SF56 25 217 8.2E-31 T 22-04-2016 RPIC_RS00525 3239288d7697503898f39298d3143054 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 63 86 7.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00525 3239288d7697503898f39298d3143054 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 55 7.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00525 3239288d7697503898f39298d3143054 225 SUPERFAMILY SSF48498 109 218 3.39E-18 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS00525 3239288d7697503898f39298d3143054 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 88 2.4E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00525 3239288d7697503898f39298d3143054 225 SUPERFAMILY SSF46689 29 113 1.28E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00525 3239288d7697503898f39298d3143054 225 Gene3D G3DSA:1.10.10.60 34 86 4.6E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 Pfam PF04073 Aminoacyl-tRNA editing domain 38 147 1.3E-22 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 PIRSF PIRSF006181 5 162 1.8E-45 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 SUPERFAMILY SSF55826 7 159 4.06E-38 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 PANTHER PTHR30411 10 154 6.1E-41 T 22-04-2016 RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 156 2.3E-46 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 PANTHER PTHR30411:SF0 10 154 6.1E-41 T 22-04-2016 RPIC_RS13900 2586d3be7c83e5592b3d10d13f704005 163 Gene3D G3DSA:3.90.960.10 3 160 1.6E-46 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS11990 a5a251fa3d903b6044498ab96fdbb94d 268 PANTHER PTHR16950 34 264 2.2E-41 T 22-04-2016 RPIC_RS11990 a5a251fa3d903b6044498ab96fdbb94d 268 Pfam PF02535 ZIP Zinc transporter 98 259 1.1E-31 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 Pfam PF00571 CBS domain 82 123 0.0038 T 22-04-2016 IPR000644 CBS domain RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 Pfam PF00571 CBS domain 131 185 9.3E-6 T 22-04-2016 IPR000644 CBS domain RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 Gene3D G3DSA:3.30.465.10 194 279 1.4E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 SUPERFAMILY SSF54631 63 197 2.27E-29 T 22-04-2016 RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 Gene3D G3DSA:3.10.580.10 55 193 1.8E-17 T 22-04-2016 RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 SUPERFAMILY SSF56176 200 286 2.73E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 Pfam PF03471 Transporter associated domain 205 278 6.2E-19 T 22-04-2016 IPR005170 Transporter-associated domain RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 PANTHER PTHR22777 15 279 2.9E-99 T 22-04-2016 RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 SMART SM01091 202 280 1.0E-24 T 22-04-2016 IPR005170 Transporter-associated domain RPIC_RS01985 99d43902910da4417e3b13566e8a2c4b 297 PANTHER PTHR22777:SF17 15 279 2.9E-99 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:3.50.40.10 203 396 3.4E-74 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 802 43.61 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:3.30.56.20 405 478 9.3E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:2.40.50.140 42 159 1.1E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SMART SM00874 406 474 1.4E-27 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Pfam PF01588 Putative tRNA binding domain 45 150 7.0E-24 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 808 1.5E-228 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 PANTHER PTHR10947 2 808 3.1E-257 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:3.30.930.10 494 694 2.0E-62 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SUPERFAMILY SSF54991 700 808 5.23E-21 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 PANTHER PTHR10947:SF0 2 808 3.1E-257 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SMART SM00873 217 390 2.4E-78 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SUPERFAMILY SSF56037 200 396 2.01E-66 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SUPERFAMILY SSF55681 470 695 1.94E-51 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SMART SM00896 706 808 7.4E-33 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:3.30.56.10 1 38 1.0E-24 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:3.30.56.10 160 189 1.0E-24 T 22-04-2016 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Gene3D G3DSA:3.30.70.380 709 808 3.5E-23 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SUPERFAMILY SSF50249 35 202 2.14E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 SUPERFAMILY SSF46955 407 478 4.94E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Pfam PF03147 Ferredoxin-fold anticodon binding domain 706 808 1.6E-22 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Pfam PF03483 B3/4 domain 218 390 4.4E-60 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RPIC_RS09695 6ada9682b4c5b3d6318ce34935c44bf3 809 Pfam PF03484 tRNA synthetase B5 domain 409 474 1.0E-18 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 189 198 2.0E-9 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 49 71 2.0E-9 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 256 2.0E-9 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PANTHER PTHR23023 128 379 1.9E-81 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PANTHER PTHR23023 45 111 1.9E-81 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 50 69 5.5E-6 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 5.5E-6 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 249 5.5E-6 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 Gene3D G3DSA:3.50.50.60 48 192 1.7E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PANTHER PTHR23023:SF119 128 379 1.9E-81 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 PANTHER PTHR23023:SF119 45 111 1.9E-81 T 22-04-2016 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 47 267 9.1E-14 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 Gene3D G3DSA:3.50.50.60 193 357 1.0E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS10240 97141e42e49c0927c5414effce793b83 499 SUPERFAMILY SSF51905 49 434 9.39E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 Gene3D G3DSA:3.40.50.720 109 285 2.8E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 282 3.1E-65 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 PANTHER PTHR10996 1 319 1.2E-138 T 22-04-2016 RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 314 1.7E-26 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 Gene3D G3DSA:3.40.50.720 2 108 1.2E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 PANTHER PTHR10996:SF118 1 319 1.2E-138 T 22-04-2016 RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 SUPERFAMILY SSF51735 95 283 1.85E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03385 594e64fdb36cbb5553eb8dfc58a7bb33 324 SUPERFAMILY SSF52283 1 129 3.78E-28 T 22-04-2016 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 SUPERFAMILY SSF75553 486 672 2.62E-8 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 PIRSF PIRSF005719 1 1170 2.2E-254 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 SMART SM00968 518 625 5.2E-12 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 SUPERFAMILY SSF57997 705 895 5.04E-5 T 22-04-2016 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 623 1.1E-7 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 PANTHER PTHR18937:SF261 420 1169 7.6E-267 T 22-04-2016 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 PANTHER PTHR18937:SF261 2 391 7.6E-267 T 22-04-2016 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 4.4E-64 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 22.421 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 PANTHER PTHR18937 420 1169 7.6E-267 T 22-04-2016 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 PANTHER PTHR18937 2 391 7.6E-267 T 22-04-2016 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 SUPERFAMILY SSF52540 2 213 5.59E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 SUPERFAMILY SSF52540 1047 1162 5.59E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 Gene3D G3DSA:3.40.50.300 437 460 2.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 Gene3D G3DSA:3.40.50.300 1054 1167 2.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06310 875726c8115a0262344e095a58d1925c 1171 Gene3D G3DSA:3.40.50.300 2 187 2.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 PANTHER PTHR30376 22 305 4.2E-104 T 22-04-2016 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 34 306 3.6E-124 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 Pfam PF04545 Sigma-70, region 4 247 302 2.0E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 68 304 3.9E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 Pfam PF00140 Sigma-70 factor, region 1.2 36 65 3.3E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 21 307 51.121 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 SUPERFAMILY SSF88946 35 142 3.92E-42 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 Pfam PF04542 Sigma-70 region 2 73 142 7.3E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 97 110 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 SUPERFAMILY SSF88659 210 306 2.8E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 Gene3D G3DSA:1.10.10.10 242 305 4.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 Gene3D G3DSA:1.10.601.10 35 142 1.0E-39 T 22-04-2016 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 PRINTS PR00046 Major sigma-70 factor signature 121 129 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 PRINTS PR00046 Major sigma-70 factor signature 290 301 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 PRINTS PR00046 Major sigma-70 factor signature 97 110 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 PRINTS PR00046 Major sigma-70 factor signature 275 290 2.2E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01115 c239ed8aeb9dfccd4d203b7c9aa78eb2 309 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 275 301 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 Pfam PF00672 HAMP domain 276 343 6.6E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 370 399 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 553 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 476 505 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 447 474 3.0E-46 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 PANTHER PTHR32089:SF63 81 599 1.3E-140 T 22-04-2016 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 SUPERFAMILY SSF58104 316 597 3.14E-69 T 22-04-2016 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 Gene3D G3DSA:1.10.287.950 364 568 1.8E-55 T 22-04-2016 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 SMART SM00283 349 596 7.3E-80 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 Pfam PF02743 Cache domain 86 256 8.2E-21 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 409 594 1.2E-56 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 Gene3D G3DSA:3.30.450.20 133 270 2.7E-24 T 22-04-2016 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 SUPERFAMILY SSF103190 111 170 3.4E-8 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 SMART SM00304 294 348 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS17350 1e378b694f82f49ee4a0fa232189a2c9 600 PANTHER PTHR32089 81 599 1.3E-140 T 22-04-2016 RPIC_RS04185 3f56f2d5bef3617aced5621c4d028892 167 Pfam PF03167 Uracil DNA glycosylase superfamily 9 159 3.4E-13 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS04185 3f56f2d5bef3617aced5621c4d028892 167 Gene3D G3DSA:3.40.470.10 7 164 2.4E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS04185 3f56f2d5bef3617aced5621c4d028892 167 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 7 156 1.9E-46 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RPIC_RS04185 3f56f2d5bef3617aced5621c4d028892 167 SMART SM00987 8 160 4.2E-10 T 22-04-2016 RPIC_RS04185 3f56f2d5bef3617aced5621c4d028892 167 SUPERFAMILY SSF52141 6 162 1.03E-39 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS04185 3f56f2d5bef3617aced5621c4d028892 167 SMART SM00986 8 160 4.2E-10 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 Pfam PF03466 LysR substrate binding domain 90 288 8.3E-21 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 Gene3D G3DSA:1.10.10.10 4 88 2.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 PANTHER PTHR30126 3 289 1.5E-104 T 22-04-2016 RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 PANTHER PTHR30126:SF4 3 289 1.5E-104 T 22-04-2016 RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 Gene3D G3DSA:3.40.190.10 184 255 4.5E-9 T 22-04-2016 RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 SUPERFAMILY SSF46785 2 112 6.96E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 Gene3D G3DSA:3.40.190.10 92 183 6.9E-8 T 22-04-2016 RPIC_RS11860 19fef9c6d0f6668ebe643589b1cbb33b 300 SUPERFAMILY SSF53850 90 290 1.1E-25 T 22-04-2016 RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 PANTHER PTHR11986:SF78 10 447 6.7E-211 T 22-04-2016 RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 SUPERFAMILY SSF53383 16 440 7.65E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 Pfam PF00202 Aminotransferase class-III 21 438 1.3E-104 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 Gene3D G3DSA:3.90.1150.10 316 441 4.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 PANTHER PTHR11986 10 447 6.7E-211 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 Gene3D G3DSA:3.40.640.10 52 315 1.2E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS18190 f8db4b583a82a6a66fc7d814ee346ef4 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 SUPERFAMILY SSF51338 4 178 8.41E-64 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PANTHER PTHR22642:SF7 321 506 6.9E-262 T 22-04-2016 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PANTHER PTHR22642:SF7 20 297 6.9E-262 T 22-04-2016 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 Pfam PF01979 Amidohydrolase family 126 459 1.2E-81 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 SUPERFAMILY SSF51556 130 437 2.78E-198 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 SUPERFAMILY SSF51556 486 572 2.78E-198 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 ProSitePatterns PS00145 Urease active site. 318 334 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 572 1.6E-293 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PANTHER PTHR22642 321 506 6.9E-262 T 22-04-2016 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PANTHER PTHR22642 20 297 6.9E-262 T 22-04-2016 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 Gene3D G3DSA:2.30.40.10 69 144 2.9E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 432 445 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 406 421 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 2.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 Gene3D G3DSA:3.20.20.140 145 434 5.0E-212 T 22-04-2016 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 Gene3D G3DSA:3.20.20.140 493 570 5.0E-212 T 22-04-2016 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 2.2E-57 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 Hamap MF_01953 Urease subunit alpha [ureC]. 3 572 57.359 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10735 886027bb7cb4d40786c5745c2670757d 572 SUPERFAMILY SSF51338 420 482 1.06E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 431 8.0E-93 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 Gene3D G3DSA:3.90.76.10 34 168 5.8E-34 T 22-04-2016 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 PANTHER PTHR30290 289 503 2.1E-113 T 22-04-2016 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 PANTHER PTHR30290 23 272 2.1E-113 T 22-04-2016 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 PIRSF PIRSF002741 10 518 2.6E-103 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 SUPERFAMILY SSF53850 15 503 4.34E-127 T 22-04-2016 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 Gene3D G3DSA:3.10.105.10 301 492 4.0E-54 T 22-04-2016 RPIC_RS10265 9417bf51ef0038c7c0c91b06e447b4a8 522 Gene3D G3DSA:3.40.190.10 169 300 3.2E-38 T 22-04-2016 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 SUPERFAMILY SSF63418 10 107 1.44E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Pfam PF08245 Mur ligase middle domain 115 307 1.0E-40 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Gene3D G3DSA:3.40.1190.10 100 324 1.1E-62 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 SUPERFAMILY SSF53244 327 459 4.03E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 SUPERFAMILY SSF53623 110 325 6.41E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 PANTHER PTHR23135:SF3 16 459 7.1E-146 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 PANTHER PTHR23135 16 459 7.1E-146 T 22-04-2016 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Pfam PF01225 Mur ligase family, catalytic domain 31 105 7.1E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 34 459 1.6E-128 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 405 1.6E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 8 460 32.565 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Gene3D G3DSA:3.40.1390.10 23 99 2.1E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15245 85949eaf403ad726565b666f697d23d2 478 Gene3D G3DSA:3.90.190.20 326 460 4.6E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 PANTHER PTHR24220 21 265 2.3E-128 T 22-04-2016 RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 PIRSF PIRSF039085 16 264 3.5E-112 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 PANTHER PTHR24220:SF327 21 265 2.3E-128 T 22-04-2016 RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 Gene3D G3DSA:3.40.50.300 18 261 5.3E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 Pfam PF00005 ABC transporter 35 188 8.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 SUPERFAMILY SSF52540 19 258 1.89E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS13770 89516cc3abe98306cefb31ae5ba8da7c 266 SMART SM00382 44 236 4.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 SUPERFAMILY SSF50249 1 71 8.14E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.973 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 PANTHER PTHR33370 2 72 3.0E-38 T 22-04-2016 RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 Gene3D G3DSA:2.40.50.140 2 72 6.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 SMART SM00316 4 72 0.0026 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 6.5E-32 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC_RS12050 3e22c3569c0c9fe5791717d291178ed8 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-24 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RPIC_RS01940 a0c267da711c5a13d40fa7575e6b3297 301 PANTHER PTHR22911:SF63 16 299 2.4E-99 T 22-04-2016 RPIC_RS01940 a0c267da711c5a13d40fa7575e6b3297 301 Pfam PF00892 EamA-like transporter family 17 147 2.3E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS01940 a0c267da711c5a13d40fa7575e6b3297 301 Pfam PF00892 EamA-like transporter family 163 299 2.9E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS01940 a0c267da711c5a13d40fa7575e6b3297 301 SUPERFAMILY SSF103481 50 150 2.88E-14 T 22-04-2016 RPIC_RS01940 a0c267da711c5a13d40fa7575e6b3297 301 PANTHER PTHR22911 16 299 2.4E-99 T 22-04-2016 RPIC_RS01940 a0c267da711c5a13d40fa7575e6b3297 301 SUPERFAMILY SSF103481 198 301 3.53E-13 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 101 557 2.1E-193 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Pfam PF00364 Biotin-requiring enzyme 125 196 8.5E-23 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Pfam PF00364 Biotin-requiring enzyme 6 75 2.3E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Gene3D G3DSA:2.40.50.100 2 96 1.2E-23 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 SUPERFAMILY SSF51230 3 97 5.63E-25 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 334 555 3.9E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Pfam PF02817 e3 binding domain 253 287 1.3E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Gene3D G3DSA:3.30.559.10 321 555 1.4E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 SUPERFAMILY SSF51230 123 212 1.7E-24 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 PANTHER PTHR23151 313 555 1.5E-247 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 PANTHER PTHR23151 24 293 1.5E-247 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 PANTHER PTHR23151:SF68 313 555 1.5E-247 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 PANTHER PTHR23151:SF68 24 293 1.5E-247 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Gene3D G3DSA:2.40.50.100 124 200 7.1E-24 T 22-04-2016 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 147 176 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 Gene3D G3DSA:4.10.320.10 250 298 2.6E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 SUPERFAMILY SSF47005 250 291 1.83E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC_RS09560 e36f6dedcced599a9489db624a2a2f02 557 SUPERFAMILY SSF52777 319 554 8.01E-84 T 22-04-2016 RPIC_RS17120 6fb363123d396490570908a2b91beb23 103 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 102 1.7E-38 T 22-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ RPIC_RS17120 6fb363123d396490570908a2b91beb23 103 SUPERFAMILY SSF81296 1 102 2.17E-32 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS17120 6fb363123d396490570908a2b91beb23 103 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 2.0E-35 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ RPIC_RS17120 6fb363123d396490570908a2b91beb23 103 Gene3D G3DSA:2.60.40.10 4 102 8.4E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 Gene3D G3DSA:3.30.450.40 99 287 2.2E-45 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 SUPERFAMILY SSF55781 101 284 3.86E-32 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 PANTHER PTHR30136:SF8 6 284 5.1E-82 T 22-04-2016 RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 Pfam PF01614 Bacterial transcriptional regulator 148 280 7.6E-7 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 SMART SM00346 30 119 7.0E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 Pfam PF09339 IclR helix-turn-helix domain 32 83 2.9E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 PANTHER PTHR30136 6 284 5.1E-82 T 22-04-2016 RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 SUPERFAMILY SSF46785 30 102 2.15E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00745 5f7dfef5a8f4fe567803c09d1ce0ed3b 292 Gene3D G3DSA:1.10.10.10 25 98 8.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-19 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.7E-12 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 19.025 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 Pfam PF01165 Ribosomal protein S21 4 56 2.4E-18 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 55 1.0E-14 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 RPIC_RS18595 814e72b02d0a9908044f63a1f412deef 70 PANTHER PTHR21109 1 60 1.4E-16 T 22-04-2016 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Gene3D G3DSA:1.10.10.350 370 464 3.7E-22 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 SUPERFAMILY SSF52374 5 302 1.8E-107 T 22-04-2016 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 SUPERFAMILY SSF48163 305 463 3.4E-39 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Gene3D G3DSA:3.90.800.10 70 186 2.1E-33 T 22-04-2016 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PANTHER PTHR11451:SF41 3 321 7.8E-91 T 22-04-2016 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 311 2.2E-97 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Gene3D G3DSA:1.10.1160.10 238 320 1.7E-34 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PANTHER PTHR11451 3 321 7.8E-91 T 22-04-2016 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 464 7.1E-165 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 465 31.175 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Gene3D G3DSA:1.10.8.70 324 364 8.9E-5 T 22-04-2016 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Gene3D G3DSA:3.40.50.620 5 69 2.7E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 Gene3D G3DSA:3.40.50.620 187 236 2.7E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS05060 29b9382dc39b8376f00a16899d5c298f 465 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 2.1E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11135 3ce51014aad67c7d4e95f667f3a622cc 356 Gene3D G3DSA:2.40.160.10 28 356 2.2E-83 T 22-04-2016 IPR023614 Porin domain RPIC_RS11135 3ce51014aad67c7d4e95f667f3a622cc 356 Pfam PF13609 Gram-negative porin 15 339 1.2E-59 T 22-04-2016 RPIC_RS11135 3ce51014aad67c7d4e95f667f3a622cc 356 SUPERFAMILY SSF56935 28 356 7.94E-76 T 22-04-2016 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 SUPERFAMILY SSF63867 347 425 1.83E-24 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 SUPERFAMILY SSF53218 193 342 3.93E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 SUPERFAMILY SSF63882 18 191 5.23E-52 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 192 331 3.3E-31 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Pfam PF03454 MoeA C-terminal region (domain IV) 351 422 4.2E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 183 3.6E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Gene3D G3DSA:2.170.190.11 62 157 1.6E-25 T 22-04-2016 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 PANTHER PTHR10192:SF11 19 425 3.6E-164 T 22-04-2016 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Pfam PF00994 Probable molybdopterin binding domain 198 335 1.4E-30 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 SMART SM00852 196 337 2.1E-44 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Gene3D G3DSA:3.90.105.10 40 61 1.7E-21 T 22-04-2016 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Gene3D G3DSA:3.90.105.10 158 178 1.7E-21 T 22-04-2016 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 PANTHER PTHR10192 19 425 3.6E-164 T 22-04-2016 RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Gene3D G3DSA:3.40.980.10 179 349 2.3E-63 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS04435 4e1cd6ef398e46b65c298f62d2eadce9 426 Gene3D G3DSA:2.40.340.10 350 420 4.7E-31 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 249 306 7.9E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 PANTHER PTHR32108 6 326 2.3E-139 T 22-04-2016 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF55257 175 228 5.0E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF55257 5 50 5.0E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 315 35.357 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 6.0E-35 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:3.30.1360.10 5 63 1.1E-10 T 22-04-2016 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 8.9E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:3.30.1360.10 176 227 2.2E-7 T 22-04-2016 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF56553 50 173 2.35E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 PANTHER PTHR32108:SF0 6 326 2.3E-139 T 22-04-2016 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 SUPERFAMILY SSF47789 249 322 4.58E-27 T 22-04-2016 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 SMART SM00662 20 230 1.6E-94 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 2.4E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 314 2.0E-106 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:2.170.120.12 64 173 1.5E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 RPIC_RS16150 d3fe1da17b9b8a55df84c8b35b9f5451 326 Gene3D G3DSA:1.10.150.20 245 322 1.6E-36 T 22-04-2016 RPIC_RS15925 09bacbd87a8b7da8d92930bb312b680e 207 PANTHER PTHR33508 1 207 5.5E-72 T 22-04-2016 RPIC_RS15925 09bacbd87a8b7da8d92930bb312b680e 207 Pfam PF01914 MarC family integral membrane protein 4 201 7.2E-61 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC_RS15925 09bacbd87a8b7da8d92930bb312b680e 207 PANTHER PTHR33508:SF1 1 207 5.5E-72 T 22-04-2016 RPIC_RS15925 09bacbd87a8b7da8d92930bb312b680e 207 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 198 1.4E-59 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 PANTHER PTHR21666 36 442 2.5E-100 T 22-04-2016 RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 Gene3D G3DSA:3.10.350.10 418 454 1.1E-7 T 22-04-2016 IPR018392 LysM domain RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 PANTHER PTHR21666:SF206 36 442 2.5E-100 T 22-04-2016 RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 Pfam PF01476 LysM domain 418 447 0.0029 T 22-04-2016 IPR018392 LysM domain RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 SUPERFAMILY SSF53955 104 264 4.56E-43 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 Gene3D G3DSA:1.10.530.10 101 262 1.1E-46 T 22-04-2016 RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 125 153 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 Gene3D G3DSA:3.10.350.10 337 378 4.4E-4 T 22-04-2016 IPR018392 LysM domain RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 SMART SM00257 334 378 0.91 T 22-04-2016 IPR018392 LysM domain RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 SMART SM00257 411 456 0.23 T 22-04-2016 IPR018392 LysM domain RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 Pfam PF01464 Transglycosylase SLT domain 111 215 2.7E-25 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS10035 04b81a2847e0dc288b2dfdf069033383 516 SUPERFAMILY SSF54106 414 455 5.1E-5 T 22-04-2016 IPR018392 LysM domain RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 120 613 2.8E-223 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 ProSitePatterns PS00674 AAA-protein family signature. 311 329 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 633 36.713 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 PANTHER PTHR23076:SF10 2 614 9.5E-285 T 22-04-2016 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 PANTHER PTHR23076 2 614 9.5E-285 T 22-04-2016 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 Pfam PF01434 Peptidase family M41 402 611 8.8E-77 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 Gene3D G3DSA:1.10.8.60 350 415 1.3E-26 T 22-04-2016 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 208 340 5.6E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 Gene3D G3DSA:3.40.50.300 165 349 3.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 SUPERFAMILY SSF52540 164 412 8.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 SMART SM00382 204 343 3.3E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS08365 4eaefcc919421ae48676b3909e4f200d 646 SUPERFAMILY SSF140990 422 619 1.44E-67 T 22-04-2016 RPIC_RS15260 e036448d8ec48f284442c99d2f8cc761 114 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 83 1.7E-27 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RPIC_RS15260 e036448d8ec48f284442c99d2f8cc761 114 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.017 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RPIC_RS15260 e036448d8ec48f284442c99d2f8cc761 114 Pfam PF04999 Cell division protein FtsL 2 78 6.8E-17 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 Pfam PF13616 PPIC-type PPIASE domain 352 451 2.2E-24 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 Pfam PF13616 PPIC-type PPIASE domain 240 343 3.6E-20 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 SUPERFAMILY SSF54534 355 454 4.32E-31 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 Gene3D G3DSA:3.10.50.40 238 351 1.2E-29 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 Gene3D G3DSA:3.10.50.40 354 475 2.1E-36 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 SUPERFAMILY SSF54534 241 343 1.57E-25 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 391 411 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 Hamap MF_01183 Chaperone SurA [surA]. 29 497 31.998 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 SUPERFAMILY SSF109998 91 270 2.16E-43 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 PANTHER PTHR10657:SF16 87 495 2.6E-90 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 PANTHER PTHR10657 87 495 2.6E-90 T 22-04-2016 RPIC_RS01925 5d353d6c0b9d946c70c1920506fea75f 500 Pfam PF09312 SurA N-terminal domain 91 208 1.1E-39 T 22-04-2016 IPR015391 SurA N-terminal RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 SUPERFAMILY SSF46894 143 207 7.14E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 Gene3D G3DSA:1.10.10.10 138 206 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 SUPERFAMILY SSF52172 1 121 2.99E-9 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 Gene3D G3DSA:3.40.50.2300 1 126 1.6E-9 T 22-04-2016 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 4.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 4.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 4.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 PANTHER PTHR26402:SF151 1 203 2.3E-25 T 22-04-2016 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 PANTHER PTHR26402 1 203 2.3E-25 T 22-04-2016 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 SMART SM00421 147 204 2.6E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS10075 c610621b1fe5b1b1202dfff46bcfa75f 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 4.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 PANTHER PTHR11695:SF558 1 260 7.7E-100 T 22-04-2016 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 Pfam PF13602 Zinc-binding dehydrogenase 121 260 2.0E-20 T 22-04-2016 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 SMART SM00829 1 260 1.4E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 Gene3D G3DSA:3.90.180.10 1 85 7.1E-19 T 22-04-2016 IPR011032 GroES-like RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 PANTHER PTHR11695 1 260 7.7E-100 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 1 260 4.2E-133 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 77 98 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 SUPERFAMILY SSF50129 1 86 5.71E-10 T 22-04-2016 IPR011032 GroES-like RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 Gene3D G3DSA:3.40.50.720 86 191 1.4E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS19010 f7c14ec1a26d740d3b53adb269cfad85 260 SUPERFAMILY SSF51735 44 213 1.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 SMART SM00478 58 210 5.4E-46 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 SUPERFAMILY SSF48150 23 248 7.07E-70 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 Gene3D G3DSA:3.90.79.10 253 378 1.1E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 Gene3D G3DSA:1.10.1670.10 142 247 1.9E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 ProSitePatterns PS01155 Endonuclease III family signature. 121 150 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 Pfam PF00633 Helix-hairpin-helix motif 118 147 9.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 SUPERFAMILY SSF55811 244 376 1.56E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 PANTHER PTHR10359 28 363 1.3E-82 T 22-04-2016 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 Pfam PF14815 NUDIX domain 259 374 3.1E-22 T 22-04-2016 IPR029119 MutY, C-terminal RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 Gene3D G3DSA:1.10.340.30 41 141 6.8E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 25 291 6.7E-100 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RPIC_RS01250 398d34729dce226aecefe76aa81ae938 382 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 55 186 5.6E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS11680 6efe4e794ebf3dfb56a8bf4adf9040e9 245 PANTHER PTHR41293 2 242 4.1E-93 T 22-04-2016 RPIC_RS11680 6efe4e794ebf3dfb56a8bf4adf9040e9 245 Pfam PF06149 Protein of unknown function (DUF969) 7 223 3.1E-84 T 22-04-2016 IPR010374 Protein of unknown function DUF969 RPIC_RS11680 6efe4e794ebf3dfb56a8bf4adf9040e9 245 PANTHER PTHR41293:SF1 2 242 4.1E-93 T 22-04-2016 RPIC_RS04155 2a86bcef975b891ea09d593cca5c1285 396 Gene3D G3DSA:3.40.640.10 60 267 2.7E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS04155 2a86bcef975b891ea09d593cca5c1285 396 PANTHER PTHR11751 15 392 1.8E-128 T 22-04-2016 RPIC_RS04155 2a86bcef975b891ea09d593cca5c1285 396 Gene3D G3DSA:3.90.1150.10 268 385 1.6E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS04155 2a86bcef975b891ea09d593cca5c1285 396 SUPERFAMILY SSF53383 7 385 1.71E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS04155 2a86bcef975b891ea09d593cca5c1285 396 PANTHER PTHR11751:SF294 15 392 1.8E-128 T 22-04-2016 RPIC_RS04155 2a86bcef975b891ea09d593cca5c1285 396 Pfam PF00155 Aminotransferase class I and II 56 377 1.5E-29 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Pfam PF00384 Molybdopterin oxidoreductase 61 478 2.7E-48 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Gene3D G3DSA:3.40.50.740 321 543 1.7E-30 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 SMART SM00926 3 58 1.2E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 58 4.6E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 PANTHER PTHR11615:SF127 4 693 8.2E-193 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Gene3D G3DSA:2.40.40.20 551 694 1.2E-44 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Gene3D G3DSA:3.40.50.740 62 137 9.6E-14 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Gene3D G3DSA:3.40.228.10 139 320 9.9E-57 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Pfam PF01568 Molydopterin dinucleotide binding domain 579 687 1.1E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 423 440 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 SUPERFAMILY SSF50692 539 692 7.01E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 SUPERFAMILY SSF53706 4 566 3.8E-165 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 Gene3D G3DSA:2.20.25.90 2 61 1.3E-17 T 22-04-2016 RPIC_RS15310 419d7debdc98b5f9d1e5ae7a24d6bb4a 698 PANTHER PTHR11615 4 693 8.2E-193 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 Gene3D G3DSA:1.10.275.10 11 114 3.8E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 467 43.087 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 1.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 1.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 1.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 1.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 Pfam PF00206 Lyase 15 308 7.9E-75 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PANTHER PTHR11444 12 469 3.2E-217 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PANTHER PTHR11444:SF3 12 469 3.2E-217 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 1.6E-68 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 1.6E-68 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 1.6E-68 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 1.6E-68 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 1.6E-68 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 1.6E-68 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 Pfam PF14698 Argininosuccinate lyase C-terminal 371 445 2.3E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 Gene3D G3DSA:1.10.40.30 382 445 8.2E-28 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 469 9.5E-183 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 Gene3D G3DSA:1.20.200.10 115 381 1.5E-109 T 22-04-2016 RPIC_RS12690 91b7beb9b2bcaa6c83248c43db432fb9 471 SUPERFAMILY SSF48557 12 469 2.36E-146 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 PANTHER PTHR36509:SF2 11 490 9.8E-67 T 22-04-2016 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 Pfam PF06863 Protein of unknown function (DUF1254) 84 212 6.5E-38 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 PANTHER PTHR36509 11 490 9.8E-67 T 22-04-2016 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 Gene3D G3DSA:1.10.3360.10 212 313 1.2E-11 T 22-04-2016 IPR023289 VPA0735-like domain RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 Gene3D G3DSA:2.60.120.600 326 486 9.4E-40 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 SUPERFAMILY SSF160935 37 485 4.58E-99 T 22-04-2016 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 Gene3D G3DSA:2.60.40.1610 104 211 3.6E-19 T 22-04-2016 IPR010679 Domain of unknown function DUF1254 RPIC_RS00450 9a575c72cd3550cfb6bb14044f0d8bae 491 Pfam PF06742 Protein of unknown function (DUF1214) 363 471 2.1E-20 T 22-04-2016 IPR010621 Domain of unknown function DUF1214 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615 772 781 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615 3 452 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615 534 546 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615 480 513 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615 576 660 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Pfam PF00384 Molybdopterin oxidoreductase 273 627 2.7E-32 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615:SF115 772 781 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615:SF115 3 452 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615:SF115 534 546 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615:SF115 480 513 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 PANTHER PTHR11615:SF115 576 660 1.2E-161 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 SUPERFAMILY SSF53706 214 651 8.98E-91 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 SUPERFAMILY SSF54292 1 74 7.11E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Gene3D G3DSA:2.40.40.20 715 757 1.6E-4 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 1.7E-18 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 627 4.1E-219 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 122 3.8E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Gene3D G3DSA:3.10.20.30 2 60 1.1E-7 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 SUPERFAMILY SSF54862 75 211 1.51E-36 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Gene3D G3DSA:3.40.50.740 519 651 8.7E-52 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 Gene3D G3DSA:3.40.50.740 273 412 8.7E-52 T 22-04-2016 RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 SUPERFAMILY SSF50692 710 776 3.62E-5 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC_RS10855 a12a5e0bab8e3e5539ec151df01cf49a 783 SMART SM00929 83 123 2.2E-21 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 SMART SM00345 32 90 5.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 SUPERFAMILY SSF48008 96 230 1.57E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 Gene3D G3DSA:1.10.10.10 21 91 2.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 SUPERFAMILY SSF46785 24 94 3.88E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 PANTHER PTHR11751 26 116 2.5E-21 T 22-04-2016 RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 Pfam PF07729 FCD domain 101 223 3.6E-23 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 Gene3D G3DSA:1.20.120.530 93 230 1.4E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 90 5.4E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS11110 0d79621e25e4aa9192155c3441689dc3 252 SMART SM00895 100 224 8.2E-16 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.23E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.23E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.23E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 SUPERFAMILY SSF54909 62 149 9.25E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 SUPERFAMILY SSF46785 1 60 4.92E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 SMART SM00344 1 110 1.1E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.6E-17 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 4.0E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 Gene3D G3DSA:1.10.10.10 2 53 5.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 Gene3D G3DSA:3.30.70.920 55 137 2.6E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 PANTHER PTHR30154:SF17 1 150 1.3E-72 T 22-04-2016 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 PANTHER PTHR30154 1 150 1.3E-72 T 22-04-2016 RPIC_RS09845 01b05c7f51e95fda95e6e8c17f231dba 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 271 345 8.0E-38 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 Gene3D G3DSA:1.10.8.60 197 268 2.3E-33 T 22-04-2016 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 357 183.584 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 SMART SM00382 65 192 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 38 340 1.6E-148 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 23 249 2.6E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 PANTHER PTHR13779:SF25 15 345 1.3E-183 T 22-04-2016 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 267 340 8.8E-34 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 PANTHER PTHR13779 15 345 1.3E-183 T 22-04-2016 RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 SUPERFAMILY SSF52540 34 265 3.32E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 Gene3D G3DSA:3.40.50.300 34 190 1.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 SUPERFAMILY SSF46785 270 344 2.24E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01845 8ec18082621b8bd1dd2e97a1a011e463 357 Gene3D G3DSA:1.10.10.10 271 341 1.3E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SUPERFAMILY SSF55781 223 376 1.74E-22 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 499 629 9.2E-15 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 374 492 7.4E-12 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SUPERFAMILY SSF55785 364 489 9.42E-14 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 PANTHER PTHR33121:SF13 804 1054 7.0E-79 T 22-04-2016 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Gene3D G3DSA:3.30.450.40 204 371 2.0E-21 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 630 790 1.7E-31 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Pfam PF00563 EAL domain 806 1040 9.2E-67 T 22-04-2016 IPR001633 EAL domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Gene3D G3DSA:3.20.20.450 806 1052 5.0E-90 T 22-04-2016 IPR001633 EAL domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Gene3D G3DSA:3.30.450.20 498 616 1.7E-21 T 22-04-2016 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SMART SM00267 622 792 1.5E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SMART SM00304 145 198 2.7E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Pfam PF00989 PAS fold 505 616 5.3E-12 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Pfam PF00990 Diguanylate cyclase, GGDEF domain 633 787 5.5E-37 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Pfam PF13188 PAS domain 379 421 4.4E-4 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Gene3D G3DSA:3.30.70.270 635 788 5.2E-43 T 22-04-2016 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SMART SM00052 800 1045 4.5E-98 T 22-04-2016 IPR001633 EAL domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SUPERFAMILY SSF55073 638 789 2.59E-39 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SMART SM00065 222 373 2.2E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SUPERFAMILY SSF55785 514 631 1.92E-19 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 PANTHER PTHR33121 804 1054 7.0E-79 T 22-04-2016 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Pfam PF13185 GAF domain 222 364 3.0E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SUPERFAMILY SSF141868 806 1053 2.75E-83 T 22-04-2016 IPR001633 EAL domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SMART SM00091 377 445 0.0044 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 SMART SM00091 503 569 5.1E-9 T 22-04-2016 IPR000014 PAS domain RPIC_RS01390 a729749b3977cb04bea307709807d242 1056 Gene3D G3DSA:3.30.450.20 372 489 1.9E-13 T 22-04-2016 RPIC_RS04765 132d1d3d2ad51fdffbec80e4cb321c0d 316 PANTHER PTHR34595 1 311 8.4E-99 T 22-04-2016 RPIC_RS04765 132d1d3d2ad51fdffbec80e4cb321c0d 316 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 2.5E-104 T 22-04-2016 IPR007296 Domain of unknown function DUF403 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 PRINTS PR00762 Chloride channel signature 121 140 3.76E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 PRINTS PR00762 Chloride channel signature 172 191 3.76E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 PRINTS PR00762 Chloride channel signature 363 379 3.76E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 PRINTS PR00762 Chloride channel signature 381 400 3.76E-13 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 Gene3D G3DSA:3.20.20.70 444 590 1.1E-13 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 SUPERFAMILY SSF54631 438 566 2.93E-16 T 22-04-2016 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 Pfam PF00654 Voltage gated chloride channel 78 410 2.3E-70 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 PANTHER PTHR11689:SF14 18 593 3.8E-62 T 22-04-2016 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 Pfam PF00571 CBS domain 446 501 9.4E-5 T 22-04-2016 IPR000644 CBS domain RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 Pfam PF00571 CBS domain 520 566 1.2E-4 T 22-04-2016 IPR000644 CBS domain RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 PANTHER PTHR11689 18 593 3.8E-62 T 22-04-2016 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 Gene3D G3DSA:1.10.3080.10 9 432 1.2E-68 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 SUPERFAMILY SSF81340 8 435 1.44E-93 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 SMART SM00116 519 569 5.8E-4 T 22-04-2016 IPR000644 CBS domain RPIC_RS13295 4f5b568c0b89ef9bdff3eeeeee6cf822 605 SMART SM00116 453 505 34.0 T 22-04-2016 IPR000644 CBS domain RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 1.2E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 PANTHER PTHR11260:SF44 1 203 7.3E-63 T 22-04-2016 RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Gene3D G3DSA:1.20.1050.10 91 194 9.8E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 SUPERFAMILY SSF52833 1 101 9.42E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Gene3D G3DSA:3.40.30.10 1 90 4.8E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 SUPERFAMILY SSF47616 73 202 8.81E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 PANTHER PTHR11260 1 203 7.3E-63 T 22-04-2016 RPIC_RS15805 f4bc05b0ff99a90f5aca5edd9da1fa7b 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 188 8.7E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Gene3D G3DSA:2.40.340.10 349 415 2.6E-8 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 SMART SM00852 189 335 4.3E-46 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 331 3.3E-25 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 SUPERFAMILY SSF63867 346 417 5.23E-14 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 PANTHER PTHR10192 13 419 1.9E-137 T 22-04-2016 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Gene3D G3DSA:2.170.190.11 57 139 1.1E-28 T 22-04-2016 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Gene3D G3DSA:3.40.980.10 172 348 1.1E-66 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 16 176 3.6E-36 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Gene3D G3DSA:3.90.105.10 140 171 5.4E-20 T 22-04-2016 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 SUPERFAMILY SSF63882 11 185 6.67E-50 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 SUPERFAMILY SSF53218 184 339 1.7E-41 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Pfam PF00994 Probable molybdopterin binding domain 189 333 9.8E-26 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 262 295 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RPIC_RS05985 a7cfb9074113cd3a1b2fe02a3337606d 419 Pfam PF03454 MoeA C-terminal region (domain IV) 350 415 1.6E-9 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 Pfam PF04408 Helicase associated domain (HA2) 469 540 1.8E-20 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 45 1329 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 PANTHER PTHR18934 741 873 0.0 T 22-04-2016 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 PANTHER PTHR18934 69 706 0.0 T 22-04-2016 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 PANTHER PTHR18934:SF109 741 873 0.0 T 22-04-2016 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 PANTHER PTHR18934:SF109 69 706 0.0 T 22-04-2016 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 Pfam PF00271 Helicase conserved C-terminal domain 287 405 2.7E-10 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 SMART SM00487 69 261 1.1E-24 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 SMART SM00847 466 556 1.4E-37 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 Pfam PF11898 Domain of unknown function (DUF3418) 714 1329 3.5E-219 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 Gene3D G3DSA:3.40.50.300 71 232 7.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 SUPERFAMILY SSF52540 68 577 1.45E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 600 700 1.0E-14 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 Gene3D G3DSA:3.40.50.300 269 418 2.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 SMART SM00490 306 406 1.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS05365 be88c9a2436f3bf651026567e5f991b9 1333 SMART SM00382 86 372 2.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 Gene3D G3DSA:1.20.1080.10 6 212 3.5E-27 T 22-04-2016 IPR023271 Aquaporin-like RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 PRINTS PR00783 Major intrinsic protein family signature 6 25 5.4E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 PRINTS PR00783 Major intrinsic protein family signature 128 146 5.4E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 PRINTS PR00783 Major intrinsic protein family signature 85 104 5.4E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 PRINTS PR00783 Major intrinsic protein family signature 48 72 5.4E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 Pfam PF00230 Major intrinsic protein 7 157 1.3E-14 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 PANTHER PTHR19139 10 212 3.1E-13 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08920 da51f1cd25f6ec0d033481c05dfbfeeb 234 SUPERFAMILY SSF81338 4 215 1.7E-37 T 22-04-2016 IPR023271 Aquaporin-like RPIC_RS07370 59a67f2dc82e83ae4af330390a2d6907 288 Pfam PF13649 Methyltransferase domain 85 172 4.3E-15 T 22-04-2016 RPIC_RS07370 59a67f2dc82e83ae4af330390a2d6907 288 PANTHER PTHR10108 50 270 2.7E-19 T 22-04-2016 RPIC_RS07370 59a67f2dc82e83ae4af330390a2d6907 288 SUPERFAMILY SSF53335 61 233 9.31E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS07370 59a67f2dc82e83ae4af330390a2d6907 288 Gene3D G3DSA:3.40.50.150 73 237 1.2E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS07370 59a67f2dc82e83ae4af330390a2d6907 288 PANTHER PTHR10108:SF705 50 270 2.7E-19 T 22-04-2016 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 4 338 7.7E-138 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 Gene3D G3DSA:3.40.50.2000 3 151 1.0E-51 T 22-04-2016 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 PANTHER PTHR30160:SF7 2 339 3.5E-83 T 22-04-2016 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 318 1.0E-65 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 Gene3D G3DSA:3.40.50.2000 166 339 8.7E-58 T 22-04-2016 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 PANTHER PTHR30160 2 339 3.5E-83 T 22-04-2016 RPIC_RS02385 3ceea3c2770cbe6721529da33a93f44b 341 SUPERFAMILY SSF53756 3 339 1.88E-99 T 22-04-2016 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 PANTHER PTHR12220 1 136 3.2E-72 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.5E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 Gene3D G3DSA:3.90.1170.10 22 135 1.6E-51 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.1E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.346 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 RPIC_RS16245 c6e658ac978ba270bd8459eebf86e5ca 138 SUPERFAMILY SSF54686 1 134 1.57E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 PANTHER PTHR26402 10 233 1.7E-95 T 22-04-2016 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 Gene3D G3DSA:3.40.50.2300 10 130 3.7E-37 T 22-04-2016 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 SMART SM00862 156 232 3.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 PANTHER PTHR26402:SF399 10 233 1.7E-95 T 22-04-2016 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 6.4E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 SUPERFAMILY SSF52172 10 192 4.27E-40 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 Pfam PF00072 Response regulator receiver domain 12 120 4.6E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 SMART SM00448 10 120 3.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16695 fdaab1f0aa27a4e41e5d842449da7875 234 Gene3D G3DSA:1.10.10.10 134 233 1.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04000 a3309e8c4eca67d7d5faa3f9fc3e93c4 457 PANTHER PTHR30624:SF1 12 457 3.6E-143 T 22-04-2016 RPIC_RS04000 a3309e8c4eca67d7d5faa3f9fc3e93c4 457 SUPERFAMILY SSF111283 18 457 9.42E-124 T 22-04-2016 RPIC_RS04000 a3309e8c4eca67d7d5faa3f9fc3e93c4 457 Pfam PF01523 Putative modulator of DNA gyrase 43 330 2.4E-54 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS04000 a3309e8c4eca67d7d5faa3f9fc3e93c4 457 PANTHER PTHR30624 12 457 3.6E-143 T 22-04-2016 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 SUPERFAMILY SSF52210 128 292 4.32E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 SUPERFAMILY SSF51735 1 127 2.28E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 PANTHER PTHR11117 1 293 1.9E-159 T 22-04-2016 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 Pfam PF02629 CoA binding domain 6 102 2.8E-24 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 Pfam PF00549 CoA-ligase 156 267 8.3E-15 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 1.8E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 SMART SM00881 4 103 4.0E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 PIRSF PIRSF001553 1 293 8.7E-117 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 Gene3D G3DSA:3.40.50.720 2 124 2.4E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 Gene3D G3DSA:3.40.50.261 125 292 2.0E-70 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02330 a2b19131b0433b216ba9bfcf3b337540 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 293 2.2E-126 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 RPIC_RS16845 eacb227ba619b21b1c73f71ac5cc1b93 227 PANTHER PTHR34071 2 214 1.1E-52 T 22-04-2016 RPIC_RS16845 eacb227ba619b21b1c73f71ac5cc1b93 227 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 25 166 5.5E-42 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RPIC_RS16845 eacb227ba619b21b1c73f71ac5cc1b93 227 PANTHER PTHR34071:SF2 2 214 1.1E-52 T 22-04-2016 RPIC_RS16845 eacb227ba619b21b1c73f71ac5cc1b93 227 Gene3D G3DSA:2.30.110.10 3 188 6.1E-77 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS16845 eacb227ba619b21b1c73f71ac5cc1b93 227 SUPERFAMILY SSF50475 7 188 1.44E-57 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 SMART SM00257 63 107 9.0E-10 T 22-04-2016 IPR018392 LysM domain RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 Pfam PF01476 LysM domain 64 106 8.2E-10 T 22-04-2016 IPR018392 LysM domain RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 Gene3D G3DSA:3.10.350.10 62 107 3.1E-15 T 22-04-2016 IPR018392 LysM domain RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 Gene3D G3DSA:2.70.70.10 144 273 9.0E-37 T 22-04-2016 RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 PANTHER PTHR21666:SF222 161 275 1.1E-39 T 22-04-2016 RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 PANTHER PTHR21666 161 275 1.1E-39 T 22-04-2016 RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 SUPERFAMILY SSF51261 63 272 2.77E-45 T 22-04-2016 IPR011055 Duplicated hybrid motif RPIC_RS05215 3d7ef27fd41fcc40ff3a513ad48d1703 275 Pfam PF01551 Peptidase family M23 175 268 2.9E-28 T 22-04-2016 IPR016047 Peptidase M23 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 SMART SM00421 149 206 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 Pfam PF00072 Response regulator receiver domain 7 111 8.4E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 Gene3D G3DSA:3.40.50.2300 5 125 2.3E-20 T 22-04-2016 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 Gene3D G3DSA:1.10.10.10 126 212 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 2.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 PANTHER PTHR26402 5 206 3.8E-37 T 22-04-2016 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 PANTHER PTHR26402:SF458 5 206 3.8E-37 T 22-04-2016 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 SUPERFAMILY SSF46894 145 211 4.76E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 SMART SM00448 5 121 1.3E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17830 d3cd51b0a70da6a0101949f33a6c6470 215 SUPERFAMILY SSF52172 6 135 3.27E-19 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 221 232 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 Pfam PF08331 Domain of unknown function (DUF1730) 79 168 3.4E-19 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 31 383 6.6E-135 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 Gene3D G3DSA:3.30.70.20 220 286 3.3E-6 T 22-04-2016 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 24 343 47.447 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 PANTHER PTHR30002 19 383 5.4E-151 T 22-04-2016 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 Pfam PF13484 4Fe-4S double cluster binding domain 221 284 1.8E-20 T 22-04-2016 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 SUPERFAMILY SSF54862 198 346 2.59E-18 T 22-04-2016 RPIC_RS13875 6d536db905b365320513da1e0bae4030 385 PANTHER PTHR30002:SF4 19 383 5.4E-151 T 22-04-2016 RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 SUPERFAMILY SSF53474 34 306 6.01E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 81 97 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 Pfam PF07859 alpha/beta hydrolase fold 81 283 5.8E-56 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 PANTHER PTHR23024 65 316 1.0E-64 T 22-04-2016 RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 149 161 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 Gene3D G3DSA:3.40.50.1820 11 308 5.6E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS01540 122536466c6463d4530b64908912b8c4 323 PANTHER PTHR23024:SF47 65 316 1.0E-64 T 22-04-2016 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 SUPERFAMILY SSF50621 264 416 3.98E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PANTHER PTHR11482:SF5 7 418 2.1E-172 T 22-04-2016 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 284 4.2E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 SUPERFAMILY SSF51419 27 286 3.79E-82 T 22-04-2016 IPR029066 PLP-binding barrel RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 Gene3D G3DSA:3.20.20.10 37 265 3.3E-80 T 22-04-2016 IPR029066 PLP-binding barrel RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 414 1.4E-162 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 289 392 2.0E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 Gene3D G3DSA:2.40.37.10 266 416 1.1E-49 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 7.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 302 320 7.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 382 404 7.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 7.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 372 385 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 274 293 2.6E-25 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 415 41.861 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS16080 f9fe5f8e41e47d9583cf6f108b4ab10c 419 PANTHER PTHR11482 7 418 2.1E-172 T 22-04-2016 RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 Pfam PF04002 RadC-like JAB domain 104 221 1.4E-40 T 22-04-2016 IPR025657 RadC-like JAB domain RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 PANTHER PTHR30471 1 224 2.1E-103 T 22-04-2016 RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 Gene3D G3DSA:1.10.150.20 47 85 5.6E-7 T 22-04-2016 RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 Gene3D G3DSA:3.40.140.10 101 223 3.9E-45 T 22-04-2016 RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 PANTHER PTHR30471:SF5 1 224 2.1E-103 T 22-04-2016 RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 SUPERFAMILY SSF47781 16 88 4.45E-13 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS13360 0eb3d35dfed025d768701850cc15851e 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 223 2.8E-69 T 22-04-2016 IPR001405 RadC protein RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 Gene3D G3DSA:3.30.1390.10 53 123 4.6E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 SUPERFAMILY SSF54736 53 123 8.02E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 2.0E-19 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 3.9E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.5E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 SUPERFAMILY SSF48300 3 60 7.85E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 23.658 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 Gene3D G3DSA:1.20.5.710 2 52 8.3E-24 T 22-04-2016 RPIC_RS16370 b2f133a404c4e2ef89822b26b88354ba 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 6.7E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 Gene3D G3DSA:3.40.190.10 181 247 3.2E-6 T 22-04-2016 RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 2.0E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 SUPERFAMILY SSF53850 89 284 1.16E-35 T 22-04-2016 RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 SUPERFAMILY SSF46785 2 108 5.55E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 Pfam PF03466 LysR substrate binding domain 87 283 9.0E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 PANTHER PTHR30537 1 299 6.5E-66 T 22-04-2016 RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 Gene3D G3DSA:1.10.10.10 1 83 6.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02690 75d8ce95afbbe350184ec36351a0f358 299 Gene3D G3DSA:3.40.190.10 91 180 8.8E-15 T 22-04-2016 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PANTHER PTHR23305 1 364 8.0E-205 T 22-04-2016 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 5.0E-156 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 6.1E-38 T 22-04-2016 IPR013029 Domain of unknown function DUF933 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 SUPERFAMILY SSF81271 280 360 8.07E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.469 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PIRSF PIRSF006641 1 364 1.1E-153 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PANTHER PTHR23305:SF12 1 364 8.0E-205 T 22-04-2016 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 SUPERFAMILY SSF52540 3 302 3.26E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Gene3D G3DSA:3.40.50.300 4 130 6.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Gene3D G3DSA:3.40.50.300 202 267 6.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Gene3D G3DSA:1.10.150.300 131 201 2.9E-27 T 22-04-2016 IPR023192 TGS-like domain RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Gene3D G3DSA:3.10.20.30 268 364 6.5E-48 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS15500 64892fad5943617ffa89c399a0bec48d 364 Pfam PF01926 50S ribosome-binding GTPase 5 122 2.1E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SUPERFAMILY SSF52540 355 462 1.56E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SUPERFAMILY SSF52540 13 350 1.99E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Gene3D G3DSA:3.30.2060.10 136 208 1.7E-12 T 22-04-2016 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1102 28.239 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SUPERFAMILY SSF52540 781 988 4.37E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SMART SM01058 477 574 2.5E-49 T 22-04-2016 IPR003711 CarD-like/TRCF domain RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SMART SM00982 1006 1106 1.6E-47 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 PANTHER PTHR14025:SF21 381 1139 0.0 T 22-04-2016 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 PANTHER PTHR14025 381 1139 0.0 T 22-04-2016 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SUPERFAMILY SSF143517 992 1141 7.19E-39 T 22-04-2016 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Gene3D G3DSA:3.40.50.300 587 784 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Pfam PF00270 DEAD/DEAH box helicase 603 760 4.8E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SUPERFAMILY SSF52540 521 781 5.59E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Pfam PF02559 CarD-like/TRCF domain 478 573 6.4E-27 T 22-04-2016 IPR003711 CarD-like/TRCF domain RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Pfam PF03461 TRCF domain 1008 1098 2.2E-27 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SUPERFAMILY SSF141259 470 546 7.32E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SMART SM00487 598 788 1.3E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Gene3D G3DSA:3.40.50.300 797 954 7.3E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 Pfam PF00271 Helicase conserved C-terminal domain 802 907 9.7E-17 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RPIC_RS09340 ec0a56a8ca86b3b5f7e62a0416dfdab5 1143 SMART SM00490 824 908 1.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 Gene3D G3DSA:1.10.10.10 14 94 2.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 Gene3D G3DSA:3.40.190.10 105 186 2.2E-18 T 22-04-2016 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 PANTHER PTHR30419:SF10 9 312 2.1E-90 T 22-04-2016 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 Gene3D G3DSA:3.40.190.10 187 277 1.5E-12 T 22-04-2016 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 SUPERFAMILY SSF53850 102 311 2.09E-36 T 22-04-2016 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 SUPERFAMILY SSF46785 11 123 1.69E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 74 7.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 Pfam PF03466 LysR substrate binding domain 103 309 1.3E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 PANTHER PTHR30419 9 312 2.1E-90 T 22-04-2016 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 2.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06540 dc94b657e4b7ae5cb17b2a51d6039729 314 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 11 311 1.2E-95 T 22-04-2016 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 PANTHER PTHR10314 5 324 1.1E-175 T 22-04-2016 RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 Hamap MF_00807 1-aminocyclopropane-1-carboxylate deaminase [acdS]. 2 338 73.733 T 22-04-2016 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 TIGRFAM TIGR01274 ACC_deam: 1-aminocyclopropane-1-carboxylate deaminase 2 337 1.6E-197 T 22-04-2016 IPR005965 1-aminocyclopropane-1-carboxylate deaminase GO:0008660|GO:0009310|GO:0030170 KEGG: 00270+3.5.99.7 RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 Gene3D G3DSA:3.40.50.1100 110 336 1.8E-78 T 22-04-2016 RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 321 1.9E-44 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 PIRSF PIRSF006278 1 338 4.2E-125 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 SUPERFAMILY SSF53686 4 334 2.19E-99 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS09860 152a7bd377ccc12b2a5772bd1f0cde65 338 PANTHER PTHR10314:SF6 5 324 1.1E-175 T 22-04-2016 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 Gene3D G3DSA:1.10.760.10 34 109 5.2E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 Pfam PF00034 Cytochrome c 35 108 1.7E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 SUPERFAMILY SSF46626 35 109 3.01E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 73 86 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 50 63 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 100 110 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 88 98 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS17130 f54e5050894974f65a370d4b6823e917 115 PRINTS PR00606 Class ID cytochrome C signature 35 48 1.94935E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS16815 f0f75292c6e6598afc027eb2e76e71af 476 Pfam PF05134 Type II secretion system (T2SS), protein L 5 312 1.3E-76 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain RPIC_RS16815 f0f75292c6e6598afc027eb2e76e71af 476 Pfam PF12693 GspL periplasmic domain 319 474 6.2E-34 T 22-04-2016 IPR025691 GspL periplasmic domain RPIC_RS16815 f0f75292c6e6598afc027eb2e76e71af 476 SUPERFAMILY SSF53067 4 165 2.98E-21 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00943 Copper-transporting ATPase signature 426 440 1.4E-12 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00943 Copper-transporting ATPase signature 735 749 1.4E-12 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00943 Copper-transporting ATPase signature 485 500 1.4E-12 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00943 Copper-transporting ATPase signature 678 695 1.4E-12 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00943 Copper-transporting ATPase signature 273 292 1.4E-12 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00943 Copper-transporting ATPase signature 219 238 1.4E-12 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF81653 306 403 2.48E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF47240 33 86 2.7E-7 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Gene3D G3DSA:2.70.150.10 247 404 2.0E-32 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 234 803 1.5E-194 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Gene3D G3DSA:3.40.1110.10 517 628 7.3E-26 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Gene3D G3DSA:3.40.50.1000 629 769 4.1E-55 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Gene3D G3DSA:3.40.50.1000 473 516 4.1E-55 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Pfam PF00122 E1-E2 ATPase 274 493 2.5E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Pfam PF00702 haloacid dehalogenase-like hydrolase 499 715 2.6E-51 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Pfam PF04945 YHS domain 33 79 6.7E-13 T 22-04-2016 IPR007029 YHS domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 Pfam PF04945 YHS domain 111 149 2.0E-12 T 22-04-2016 IPR007029 YHS domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 216 804 9.8E-177 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 504 510 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF81665 750 763 1.11E-7 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF81665 404 496 1.11E-7 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF81665 250 307 1.11E-7 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PANTHER PTHR24093 178 805 5.8E-240 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF56784 500 520 4.78E-64 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SUPERFAMILY SSF56784 559 800 4.78E-64 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 275 784 2.1E-92 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 720 5.6E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 5.6E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 658 5.6E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 637 5.6E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 502 516 5.6E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 724 736 5.6E-29 T 22-04-2016 RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SMART SM00746 112 149 1.2E-8 T 22-04-2016 IPR011017 TRASH domain RPIC_RS08125 698a154eddd18429d3612749b8f20477 817 SMART SM00746 35 73 3.0E-8 T 22-04-2016 IPR011017 TRASH domain RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 SUPERFAMILY SSF56601 438 755 2.75E-121 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 SUPERFAMILY SSF56601 231 253 2.75E-121 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 SUPERFAMILY SSF56601 282 333 2.75E-121 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Gene3D G3DSA:1.10.3810.10 77 251 5.1E-74 T 22-04-2016 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Pfam PF00912 Transglycosylase 77 249 1.3E-62 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Gene3D G3DSA:3.40.710.10 252 333 1.0E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Gene3D G3DSA:3.40.710.10 438 755 1.0E-132 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Gene3D G3DSA:2.40.50.140 367 437 1.6E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 PANTHER PTHR32282 437 745 1.3E-243 T 22-04-2016 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 PANTHER PTHR32282 1 330 1.3E-243 T 22-04-2016 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 PANTHER PTHR32282:SF5 437 745 1.3E-243 T 22-04-2016 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 PANTHER PTHR32282:SF5 1 330 1.3E-243 T 22-04-2016 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Pfam PF00905 Penicillin binding protein transpeptidase domain 447 696 8.8E-39 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 SUPERFAMILY SSF53955 63 271 1.07E-74 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 86 728 6.1E-190 T 22-04-2016 RPIC_RS16065 61e71f641f32d3678a85ef36371f83d7 804 Pfam PF17092 Penicillin-binding protein OB-like domain 336 441 6.0E-23 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 SUPERFAMILY SSF54631 94 202 1.15E-27 T 22-04-2016 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 455 7.5E-189 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 PANTHER PTHR11911:SF6 1 279 1.4E-243 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 PANTHER PTHR11911:SF6 297 486 1.4E-243 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 473 1.7E-162 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 SMART SM01240 6 473 0.0 T 22-04-2016 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 PIRSF PIRSF000130 1 487 3.0E-204 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 Pfam PF00571 CBS domain 94 138 2.3E-8 T 22-04-2016 IPR000644 CBS domain RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 Pfam PF00571 CBS domain 153 202 1.7E-8 T 22-04-2016 IPR000644 CBS domain RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 PANTHER PTHR11911 1 279 1.4E-243 T 22-04-2016 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 PANTHER PTHR11911 297 486 1.4E-243 T 22-04-2016 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 SMART SM00116 156 204 2.1E-9 T 22-04-2016 IPR000644 CBS domain RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 SMART SM00116 95 142 2.3E-8 T 22-04-2016 IPR000644 CBS domain RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 486 83.706 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 SUPERFAMILY SSF51412 215 477 2.75E-125 T 22-04-2016 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 SUPERFAMILY SSF51412 2 89 2.75E-125 T 22-04-2016 RPIC_RS06490 dbc96bddb794ddf41298045ed7ff89e1 487 Gene3D G3DSA:3.20.20.70 5 485 2.1E-200 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS05950 6aedb31d889f028ad6512a63b7f317b2 123 Pfam PF00892 EamA-like transporter family 50 121 9.4E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS05950 6aedb31d889f028ad6512a63b7f317b2 123 PANTHER PTHR30561 49 123 1.9E-15 T 22-04-2016 RPIC_RS05950 6aedb31d889f028ad6512a63b7f317b2 123 SUPERFAMILY SSF103481 48 122 6.93E-13 T 22-04-2016 RPIC_RS05950 6aedb31d889f028ad6512a63b7f317b2 123 PANTHER PTHR30561:SF9 49 123 1.9E-15 T 22-04-2016 RPIC_RS04545 5591f78a8427f36aefc5e87c3b3ce617 91 Gene3D G3DSA:3.40.30.10 3 88 5.1E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS04545 5591f78a8427f36aefc5e87c3b3ce617 91 SUPERFAMILY SSF52833 3 86 2.47E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS04545 5591f78a8427f36aefc5e87c3b3ce617 91 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 84 2.3E-17 T 22-04-2016 IPR008554 Glutaredoxin-like RPIC_RS17165 081881d580e5d72eafc45653670323b5 243 PANTHER PTHR34183 96 212 4.4E-43 T 22-04-2016 RPIC_RS17165 081881d580e5d72eafc45653670323b5 243 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 107 212 3.8E-37 T 22-04-2016 IPR012997 Rare lipoprotein A RPIC_RS17165 081881d580e5d72eafc45653670323b5 243 SUPERFAMILY SSF50685 106 194 2.41E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC_RS17165 081881d580e5d72eafc45653670323b5 243 Pfam PF03330 Lytic transglycolase 105 193 6.6E-22 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC_RS17165 081881d580e5d72eafc45653670323b5 243 PANTHER PTHR34183:SF2 96 212 4.4E-43 T 22-04-2016 RPIC_RS08080 50f0764f81e151c76f27d85e4b4cb177 201 Gene3D G3DSA:1.20.144.10 13 181 6.1E-25 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08080 50f0764f81e151c76f27d85e4b4cb177 201 SMART SM00014 70 182 6.5E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08080 50f0764f81e151c76f27d85e4b4cb177 201 PANTHER PTHR14969 13 184 4.7E-21 T 22-04-2016 RPIC_RS08080 50f0764f81e151c76f27d85e4b4cb177 201 SUPERFAMILY SSF48317 6 183 8.63E-33 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08080 50f0764f81e151c76f27d85e4b4cb177 201 Pfam PF01569 PAP2 superfamily 72 185 3.1E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 SMART SM00278 636 655 270.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 SMART SM00278 604 623 1.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Pfam PF01541 GIY-YIG catalytic domain 42 116 1.3E-8 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Gene3D G3DSA:3.40.1440.10 41 120 4.7E-7 T 22-04-2016 IPR027299 GIY-YIG domain RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 439 590 2.1E-45 T 22-04-2016 IPR001162 UvrC family homology region RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Hamap MF_00203 UvrABC system protein C [uvrC]. 27 655 26.564 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Pfam PF02151 UvrB/uvrC motif 227 259 4.8E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Pfam PF14520 Helix-hairpin-helix domain 606 656 2.1E-6 T 22-04-2016 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 32 637 8.8E-166 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 SUPERFAMILY SSF82771 39 123 7.72E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 PANTHER PTHR30562 340 656 3.5E-220 T 22-04-2016 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 PANTHER PTHR30562 31 313 3.5E-220 T 22-04-2016 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Gene3D G3DSA:1.10.150.20 603 657 2.1E-21 T 22-04-2016 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 SMART SM00465 40 121 8.2E-20 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 SUPERFAMILY SSF46600 213 265 3.01E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 PANTHER PTHR30562:SF1 340 656 3.5E-220 T 22-04-2016 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 PANTHER PTHR30562:SF1 31 313 3.5E-220 T 22-04-2016 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 SUPERFAMILY SSF47781 555 657 9.21E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS04605 defd0526588b3a092d36554566d6a5df 657 Gene3D G3DSA:4.10.860.10 205 265 3.7E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 SUPERFAMILY SSF110849 22 110 5.93E-12 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 Pfam PF02195 ParB-like nuclease domain 27 78 5.6E-8 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 Pfam PF05063 MT-A70 228 384 6.2E-29 T 22-04-2016 IPR007757 MT-A70-like GO:0006139|GO:0008168 RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 Gene3D G3DSA:3.40.50.150 226 336 1.9E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 Gene3D G3DSA:3.90.1530.10 25 71 1.5E-8 T 22-04-2016 RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 SUPERFAMILY SSF53335 226 387 6.05E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 PANTHER PTHR12829 220 418 4.7E-17 T 22-04-2016 RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 SMART SM00470 9 90 0.0012 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS02165 57df147f2a8a634c50c574e51173b4f6 426 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 231 237 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 1.5E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 Gene3D G3DSA:3.40.50.2300 172 307 1.3E-36 T 22-04-2016 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 Pfam PF13377 Periplasmic binding protein-like domain 167 326 2.4E-33 T 22-04-2016 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 PANTHER PTHR30146 1 326 3.6E-98 T 22-04-2016 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 SUPERFAMILY SSF53822 60 316 4.4E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 SMART SM00354 2 71 3.0E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 PANTHER PTHR30146:SF4 1 326 3.6E-98 T 22-04-2016 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 SUPERFAMILY SSF47413 2 57 1.22E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 Gene3D G3DSA:1.10.260.40 3 53 1.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS15315 a5358d93d9c1569027f4574273ad5183 331 Gene3D G3DSA:3.40.50.2300 54 171 2.6E-43 T 22-04-2016 RPIC_RS10230 cb5fd84ddce5011c1cb739457f493511 383 SUPERFAMILY SSF53822 38 382 1.68E-57 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS10230 cb5fd84ddce5011c1cb739457f493511 383 Pfam PF13458 Periplasmic binding protein 38 361 3.9E-46 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS10230 cb5fd84ddce5011c1cb739457f493511 383 PANTHER PTHR30483 27 362 2.8E-34 T 22-04-2016 RPIC_RS10230 cb5fd84ddce5011c1cb739457f493511 383 Gene3D G3DSA:3.40.50.2300 168 312 2.9E-8 T 22-04-2016 RPIC_RS10230 cb5fd84ddce5011c1cb739457f493511 383 Gene3D G3DSA:3.40.50.2300 313 362 2.2E-33 T 22-04-2016 RPIC_RS10230 cb5fd84ddce5011c1cb739457f493511 383 Gene3D G3DSA:3.40.50.2300 34 161 2.2E-33 T 22-04-2016 RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 Gene3D G3DSA:3.10.580.10 195 318 6.9E-17 T 22-04-2016 RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 Pfam PF03471 Transporter associated domain 344 417 1.0E-15 T 22-04-2016 IPR005170 Transporter-associated domain RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 Pfam PF01595 Domain of unknown function DUF21 13 183 7.4E-45 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 SUPERFAMILY SSF54631 197 332 2.71E-25 T 22-04-2016 RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 SUPERFAMILY SSF56176 344 421 5.73E-18 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 SMART SM01091 341 419 5.9E-22 T 22-04-2016 IPR005170 Transporter-associated domain RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 PANTHER PTHR22777 1 415 8.5E-116 T 22-04-2016 RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 Pfam PF00571 CBS domain 206 263 1.6E-4 T 22-04-2016 IPR000644 CBS domain RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 Pfam PF00571 CBS domain 279 326 4.2E-4 T 22-04-2016 IPR000644 CBS domain RPIC_RS15125 39a0382f1b7479dfc816e5e4c8b69feb 424 Gene3D G3DSA:3.30.465.10 319 417 1.5E-21 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 SUPERFAMILY SSF55424 355 476 4.3E-41 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 478 4.9E-164 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PIRSF PIRSF000350 1 477 7.0E-85 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 48 58 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PANTHER PTHR22912:SF131 1 129 9.3E-228 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PANTHER PTHR22912:SF131 147 471 9.3E-228 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 340 8.6E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 Gene3D G3DSA:3.50.50.60 153 346 1.2E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 359 467 2.7E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 188 213 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 320 327 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 291 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 47 62 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 462 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 435 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 2.6E-77 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 SUPERFAMILY SSF51905 1 350 4.54E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 Gene3D G3DSA:3.50.50.60 2 152 2.6E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.8E-41 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 188 206 5.8E-41 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 292 5.8E-41 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.8E-41 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 327 5.8E-41 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 Gene3D G3DSA:3.30.390.30 347 474 6.2E-49 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PANTHER PTHR22912 1 129 9.3E-228 T 22-04-2016 RPIC_RS05465 6f07fc588b55600bd1dea8f23a92aa09 478 PANTHER PTHR22912 147 471 9.3E-228 T 22-04-2016 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 PIRSF PIRSF017184 25 529 2.5E-112 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 460 470 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 Pfam PF03853 YjeF-related protein N-terminus 46 209 5.9E-40 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 PANTHER PTHR12592 14 530 1.4E-112 T 22-04-2016 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 PANTHER PTHR12592:SF0 14 530 1.4E-112 T 22-04-2016 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 SUPERFAMILY SSF53613 244 514 5.77E-61 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 Gene3D G3DSA:3.40.1190.20 254 522 5.5E-77 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 Gene3D G3DSA:3.40.50.10260 27 253 9.9E-64 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 252 513 6.9E-59 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 246 526 21.943 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 37 227 3.8E-33 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 SUPERFAMILY SSF64153 27 267 4.05E-55 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 Pfam PF01256 Carbohydrate kinase 270 499 7.1E-50 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 RPIC_RS09115 a27903ed8270463b745a4a8b612c5ffb 531 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 25 230 21.554 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 Gene3D G3DSA:1.20.1250.20 235 419 1.3E-23 T 22-04-2016 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 Gene3D G3DSA:1.20.1250.20 10 219 2.0E-27 T 22-04-2016 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 Pfam PF07690 Major Facilitator Superfamily 274 417 2.8E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 Pfam PF00083 Sugar (and other) transporter 17 220 7.1E-24 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 PANTHER PTHR23508 7 422 1.7E-269 T 22-04-2016 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 PANTHER PTHR23508:SF14 7 422 1.7E-269 T 22-04-2016 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS16535 4b04c62a96b19cdaf99dc6c745fee35d 433 SUPERFAMILY SSF103473 10 422 1.57E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 SUPERFAMILY SSF46785 6 100 8.71E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 Gene3D G3DSA:3.40.190.10 78 158 4.9E-17 T 22-04-2016 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 53 1.0E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 SUPERFAMILY SSF53850 78 229 3.36E-24 T 22-04-2016 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 Gene3D G3DSA:3.40.190.10 168 226 1.5E-4 T 22-04-2016 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 PANTHER PTHR30579 1 267 1.2E-55 T 22-04-2016 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 PANTHER PTHR30579:SF0 1 267 1.2E-55 T 22-04-2016 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 Pfam PF03466 LysR substrate binding domain 78 228 8.1E-24 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 30 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 9 20 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07380 2eb5e49012cefe28c1b8137bf7e30061 271 Gene3D G3DSA:1.10.10.10 6 73 1.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03420 17fdcb524092733e18c04020e95f2848 224 Gene3D G3DSA:3.40.50.300 4 218 2.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03420 17fdcb524092733e18c04020e95f2848 224 SMART SM00382 28 217 1.9E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS03420 17fdcb524092733e18c04020e95f2848 224 PANTHER PTHR24220 15 218 3.9E-43 T 22-04-2016 RPIC_RS03420 17fdcb524092733e18c04020e95f2848 224 Pfam PF00005 ABC transporter 19 166 4.0E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS03420 17fdcb524092733e18c04020e95f2848 224 SUPERFAMILY SSF52540 14 218 7.55E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08935 65f1d158079bc064a6c9fb8fcdf923af 160 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 112 1.2E-4 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS08935 65f1d158079bc064a6c9fb8fcdf923af 160 PANTHER PTHR41294:SF1 2 149 5.7E-38 T 22-04-2016 RPIC_RS08935 65f1d158079bc064a6c9fb8fcdf923af 160 PANTHER PTHR41294 2 149 5.7E-38 T 22-04-2016 RPIC_RS08935 65f1d158079bc064a6c9fb8fcdf923af 160 SUPERFAMILY SSF54593 2 118 2.42E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS08935 65f1d158079bc064a6c9fb8fcdf923af 160 Gene3D G3DSA:3.10.180.10 5 113 3.3E-17 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 PANTHER PTHR30136 1 260 3.2E-64 T 22-04-2016 RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 Pfam PF01614 Bacterial transcriptional regulator 149 267 1.2E-12 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 PANTHER PTHR30136:SF4 1 260 3.2E-64 T 22-04-2016 RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 SUPERFAMILY SSF55781 91 269 2.62E-34 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 Gene3D G3DSA:1.10.10.10 17 94 1.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 SMART SM00346 24 114 1.2E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 SUPERFAMILY SSF46785 24 97 2.05E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 Pfam PF09339 IclR helix-turn-helix domain 26 77 3.0E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS03460 f0c1a33184a0c0df33fded705a5235d3 274 Gene3D G3DSA:3.30.450.40 95 268 1.2E-37 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.506 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 Gene3D G3DSA:1.20.58.110 1 86 3.0E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 SUPERFAMILY SSF46992 3 86 1.7E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 Pfam PF01649 Ribosomal protein S20 2 84 1.4E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 68 3.0E-5 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 PANTHER PTHR33398 1 88 1.2E-27 T 22-04-2016 RPIC_RS13950 c61d952283caf25e95efcf0e77f1c50c 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.3E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 SUPERFAMILY SSF53067 101 314 1.17E-45 T 22-04-2016 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 Pfam PF00814 Glycoprotease family 25 312 1.5E-99 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 318 6.4E-133 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 311 2.1E-112 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 SUPERFAMILY SSF53067 3 121 2.2E-30 T 22-04-2016 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 Gene3D G3DSA:3.30.420.40 1 159 1.0E-48 T 22-04-2016 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PANTHER PTHR11735 1 342 1.1E-150 T 22-04-2016 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PANTHER PTHR11735:SF6 1 342 1.1E-150 T 22-04-2016 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 8.0E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 8.0E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.0E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 8.0E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 8.0E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 8.0E-52 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS11950 c8cd7284ef98dfe1e559f83f001c7d46 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 339 63.396 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 7 314 6.9E-93 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 Pfam PF00294 pfkB family carbohydrate kinase 16 299 1.1E-49 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 PANTHER PTHR10584:SF170 1 317 4.8E-92 T 22-04-2016 RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 Gene3D G3DSA:3.40.1190.20 38 317 1.2E-75 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 PIRSF PIRSF000535 4 317 7.4E-83 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 SUPERFAMILY SSF53613 7 303 4.52E-66 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 7 313 4.5E-93 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 RPIC_RS15325 d81a37513e2bdbd714087d4738144a5b 318 PANTHER PTHR10584 1 317 4.8E-92 T 22-04-2016 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 PRINTS PR00783 Major intrinsic protein family signature 51 75 5.5E-18 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 PRINTS PR00783 Major intrinsic protein family signature 131 149 5.5E-18 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 PRINTS PR00783 Major intrinsic protein family signature 88 107 5.5E-18 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 PRINTS PR00783 Major intrinsic protein family signature 9 28 5.5E-18 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 Gene3D G3DSA:1.20.1080.10 4 223 3.5E-28 T 22-04-2016 IPR023271 Aquaporin-like RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 SUPERFAMILY SSF81338 4 222 1.7E-32 T 22-04-2016 IPR023271 Aquaporin-like RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 ProSitePatterns PS00221 MIP family signature. 69 77 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 Pfam PF00230 Major intrinsic protein 6 122 3.7E-17 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17835 d7b2cce764ede281bd01f750ef86bf1b 246 PANTHER PTHR19139 5 140 4.7E-17 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS11755 83ceb33d19952d1c13b99478474a4325 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 7.7E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS11755 83ceb33d19952d1c13b99478474a4325 216 Gene3D G3DSA:3.40.50.2020 9 215 1.8E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS11755 83ceb33d19952d1c13b99478474a4325 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 43.179 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RPIC_RS11755 83ceb33d19952d1c13b99478474a4325 216 SUPERFAMILY SSF53271 11 213 4.12E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS11755 83ceb33d19952d1c13b99478474a4325 216 PANTHER PTHR10285 10 204 2.8E-81 T 22-04-2016 RPIC_RS11755 83ceb33d19952d1c13b99478474a4325 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 10 215 1.4E-75 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 Gene3D G3DSA:1.20.1250.20 261 427 1.2E-5 T 22-04-2016 RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 Gene3D G3DSA:1.20.1250.20 39 229 4.7E-18 T 22-04-2016 RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 Pfam PF07690 Major Facilitator Superfamily 38 384 1.7E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 SUPERFAMILY SSF103473 28 428 2.88E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 PANTHER PTHR23508:SF16 16 432 1.2E-132 T 22-04-2016 RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS09215 2edb4be12f8ea905264e4d716faff09e 439 PANTHER PTHR23508 16 432 1.2E-132 T 22-04-2016 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 5.1E-6 T 22-04-2016 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 Gene3D G3DSA:3.40.50.720 2 248 2.2E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PANTHER PTHR24322:SF635 12 140 1.3E-67 T 22-04-2016 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PANTHER PTHR24322:SF635 156 188 1.3E-67 T 22-04-2016 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 2.0E-70 T 22-04-2016 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.9E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.8E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.8E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.8E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.8E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.8E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.8E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 247 1.7E-103 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PANTHER PTHR24322 12 140 1.3E-67 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 PANTHER PTHR24322 156 188 1.3E-67 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04510 6e80c4e69c763e2cd4ce8d58334c6fb6 249 SUPERFAMILY SSF51735 7 248 2.52E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.90.640.10 234 296 9.2E-20 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 PANTHER PTHR32432:SF4 1 406 1.2E-156 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Pfam PF14450 Cell division protein FtsA 10 193 3.6E-12 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Pfam PF14450 Cell division protein FtsA 206 373 3.9E-26 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 SMART SM00842 9 195 1.3E-106 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 297 351 2.4E-33 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 209 233 2.4E-33 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 157 208 5.9E-25 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.420.40 3 82 5.9E-25 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 2.2E-32 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.334 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 376 1.4E-147 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 SUPERFAMILY SSF53067 7 196 4.61E-63 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 PIRSF PIRSF003101 1 410 1.7E-151 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 PANTHER PTHR32432 1 406 1.2E-156 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 SUPERFAMILY SSF53067 197 375 5.35E-49 T 22-04-2016 RPIC_RS15205 82e3198e4018b608f76604c6b7dfbce9 410 Gene3D G3DSA:3.30.1490.110 85 156 3.7E-18 T 22-04-2016 RPIC_RS03490 94f66cd2259e638976b94ccfabefb75d 192 PANTHER PTHR30466 4 189 2.8E-35 T 22-04-2016 RPIC_RS03490 94f66cd2259e638976b94ccfabefb75d 192 Pfam PF01613 Flavin reductase like domain 38 187 2.0E-35 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RPIC_RS03490 94f66cd2259e638976b94ccfabefb75d 192 Gene3D G3DSA:2.30.110.10 24 185 1.7E-56 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS03490 94f66cd2259e638976b94ccfabefb75d 192 SMART SM00903 37 186 2.4E-60 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 RPIC_RS03490 94f66cd2259e638976b94ccfabefb75d 192 SUPERFAMILY SSF50475 28 185 2.99E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS03490 94f66cd2259e638976b94ccfabefb75d 192 PANTHER PTHR30466:SF1 4 189 2.8E-35 T 22-04-2016 RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 Gene3D G3DSA:2.40.100.10 187 310 3.2E-9 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 322 2.1E-109 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 SUPERFAMILY SSF50891 187 303 4.17E-15 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 PANTHER PTHR18866:SF74 160 330 1.3E-34 T 22-04-2016 RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 Pfam PF02626 Allophanate hydrolase subunit 2 24 296 3.0E-96 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 SMART SM00797 23 313 5.5E-150 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B RPIC_RS11690 1f295e5eb3804bdbd9474711a9e82241 342 PANTHER PTHR18866 160 330 1.3E-34 T 22-04-2016 RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 SUPERFAMILY SSF52540 9 239 2.28E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 SMART SM00382 36 225 9.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 PANTHER PTHR24220:SF368 11 260 1.6E-132 T 22-04-2016 RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 Gene3D G3DSA:3.40.50.300 4 239 2.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 Pfam PF00005 ABC transporter 29 176 4.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS15995 fb9938624fff43219fa47ff31b70dab2 277 PANTHER PTHR24220 11 260 1.6E-132 T 22-04-2016 RPIC_RS07740 99010c8da5021903e07681c0f6963cd0 406 Pfam PF06666 Protein of unknown function (DUF1173) 23 381 4.2E-46 T 22-04-2016 IPR009553 Protein of unknown function DUF1173 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 18 303 25.276 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 Gene3D G3DSA:3.30.200.20 10 122 6.1E-42 T 22-04-2016 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 PANTHER PTHR11609 15 307 2.7E-143 T 22-04-2016 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 Gene3D G3DSA:3.30.470.20 123 253 4.0E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 PANTHER PTHR11609:SF6 15 307 2.7E-143 T 22-04-2016 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 Pfam PF01259 SAICAR synthetase 21 267 1.0E-98 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 ProSitePatterns PS01058 SAICAR synthetase signature 2. 210 218 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 21 303 1.8E-78 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 ProSitePatterns PS01057 SAICAR synthetase signature 1. 111 125 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC_RS02425 21931f433716c6bb8cf333f869a683db 307 SUPERFAMILY SSF56104 10 305 1.77E-101 T 22-04-2016 RPIC_RS06470 a5e5e1b8a8a5ce6da788712f50546806 145 SUPERFAMILY SSF55961 1 143 3.04E-33 T 22-04-2016 RPIC_RS06470 a5e5e1b8a8a5ce6da788712f50546806 145 PANTHER PTHR12901:SF7 1 145 2.0E-47 T 22-04-2016 RPIC_RS06470 a5e5e1b8a8a5ce6da788712f50546806 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.9E-29 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain RPIC_RS06470 a5e5e1b8a8a5ce6da788712f50546806 145 PANTHER PTHR12901 1 145 2.0E-47 T 22-04-2016 RPIC_RS06470 a5e5e1b8a8a5ce6da788712f50546806 145 Gene3D G3DSA:3.30.530.20 1 144 1.8E-42 T 22-04-2016 IPR023393 START-like domain RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Gene3D G3DSA:3.30.230.10 594 774 8.9E-76 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 3.2E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 679 687 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 3.3E-55 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 729 747 3.3E-55 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 725 3.3E-55 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 598 614 3.3E-55 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 3.3E-55 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 SUPERFAMILY SSF88697 13 204 8.95E-53 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 SUPERFAMILY SSF52540 315 590 1.34E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 SMART SM00464 13 205 1.4E-76 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 14 203 5.7E-45 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PANTHER PTHR10046 11 779 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PANTHER PTHR10046:SF43 11 779 0.0 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 SMART SM00382 350 494 4.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Gene3D G3DSA:1.10.8.60 502 587 2.5E-34 T 22-04-2016 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 572 775 9.0E-98 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 TIGRFAM TIGR00763 lon: endopeptidase La 15 774 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Gene3D G3DSA:3.40.50.300 313 501 1.7E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 PIRSF PIRSF001174 4 778 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 Hamap MF_01973 Lon protease [lon]. 14 775 71.835 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 RPIC_RS09160 195eb397bc9425461db9ece592c4a2ab 804 SUPERFAMILY SSF54211 598 773 2.35E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 355 362 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 Gene3D G3DSA:3.40.220.10 1 170 2.9E-52 T 22-04-2016 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 SUPERFAMILY SSF52949 1 192 3.3E-39 T 22-04-2016 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 194 494 1.7E-122 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 8 501 36.677 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 SUPERFAMILY SSF53187 187 500 9.73E-126 T 22-04-2016 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PRINTS PR00481 Cytosol aminopeptidase signature 329 350 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PRINTS PR00481 Cytosol aminopeptidase signature 292 313 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PRINTS PR00481 Cytosol aminopeptidase signature 379 394 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PRINTS PR00481 Cytosol aminopeptidase signature 270 287 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PRINTS PR00481 Cytosol aminopeptidase signature 351 371 9.4E-55 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PANTHER PTHR11963:SF13 15 501 6.5E-207 T 22-04-2016 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 24 145 2.1E-26 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 Gene3D G3DSA:3.40.630.10 187 500 3.4E-140 T 22-04-2016 RPIC_RS13195 9784834ce77bed29de9b83e9346a6afa 502 PANTHER PTHR11963 15 501 6.5E-207 T 22-04-2016 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 SUPERFAMILY SSF50156 503 589 1.2E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 PANTHER PTHR22939:SF73 510 581 2.0E-18 T 22-04-2016 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 Gene3D G3DSA:2.30.42.10 488 584 1.8E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 SUPERFAMILY SSF55486 252 470 3.44E-9 T 22-04-2016 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 PIRSF PIRSF016493 1 607 4.2E-208 T 22-04-2016 IPR024191 Peptidase M61 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 Pfam PF05299 M61 glycyl aminopeptidase 289 405 6.7E-47 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 Pfam PF13180 PDZ domain 503 579 6.7E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 PANTHER PTHR22939 510 581 2.0E-18 T 22-04-2016 RPIC_RS15460 08d211583cb1e0fbc349c1ed4e92f7f1 620 SMART SM00228 501 570 6.6E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 243 30.262 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 241 1.5E-64 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 Gene3D G3DSA:3.90.550.10 10 244 6.2E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 12 240 6.8E-66 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 PANTHER PTHR32125 12 245 2.1E-60 T 22-04-2016 RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 SUPERFAMILY SSF53448 11 240 2.25E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 113 120 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09335 6ed03808b05edf2a0e152c076d0ddb1a 252 PANTHER PTHR32125:SF4 12 245 2.1E-60 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Gene3D G3DSA:3.30.70.260 667 738 7.3E-16 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 PANTHER PTHR21262 41 741 4.9E-272 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 SUPERFAMILY SSF55021 664 740 4.2E-13 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Gene3D G3DSA:3.10.20.30 412 473 3.3E-22 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Pfam PF13328 HD domain 22 189 8.4E-47 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Gene3D G3DSA:3.30.460.10 191 338 6.2E-51 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Pfam PF04607 Region found in RelA / SpoT proteins 248 358 4.6E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Pfam PF13291 ACT domain 665 740 1.1E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 SMART SM00954 248 358 1.3E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 SUPERFAMILY SSF81301 205 385 1.96E-63 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 SUPERFAMILY SSF109604 12 202 1.41E-40 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 SUPERFAMILY SSF81271 403 471 3.71E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 PANTHER PTHR21262:SF5 41 741 4.9E-272 T 22-04-2016 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 Pfam PF02824 TGS domain 412 471 1.2E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIC_RS09730 3ce579daecbed07a5244c52855ab237d 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 36 739 6.3E-174 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PANTHER PTHR22773 1 483 4.3E-207 T 22-04-2016 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.8E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.8E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.8E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.8E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.8E-49 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 57 121 2.1E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 PANTHER PTHR22773:SF40 1 483 4.3E-207 T 22-04-2016 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 Pfam PF00361 Proton-conducting membrane transporter 130 413 1.4E-79 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RPIC_RS10825 75d6b29337d03f4b34549567c6c0d0f9 488 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 482 1.3E-187 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 SUPERFAMILY SSF52733 4 349 3.14E-116 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 Gene3D G3DSA:1.10.1610.10 6 68 2.7E-31 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 11 348 4.3E-130 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 Gene3D G3DSA:3.40.50.10210 69 330 4.7E-105 T 22-04-2016 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 Pfam PF02277 Phosphoribosyltransferase 7 348 1.4E-127 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 9 350 35.225 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 PANTHER PTHR21712:SF4 7 351 6.5E-111 T 22-04-2016 RPIC_RS13115 687479586c6b3fd5bcb9ad87222e1166 354 PANTHER PTHR21712 7 351 6.5E-111 T 22-04-2016 RPIC_RS10630 129e5486af092ce24dd84c16f03f3167 381 SMART SM00631 110 361 4.6E-4 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RPIC_RS10630 129e5486af092ce24dd84c16f03f3167 381 PANTHER PTHR12756 8 325 7.2E-102 T 22-04-2016 RPIC_RS10630 129e5486af092ce24dd84c16f03f3167 381 Pfam PF00246 Zinc carboxypeptidase 129 349 2.3E-21 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 RPIC_RS10630 129e5486af092ce24dd84c16f03f3167 381 PANTHER PTHR12756:SF18 8 325 7.2E-102 T 22-04-2016 RPIC_RS10630 129e5486af092ce24dd84c16f03f3167 381 Gene3D G3DSA:3.40.630.10 101 357 4.6E-42 T 22-04-2016 RPIC_RS10630 129e5486af092ce24dd84c16f03f3167 381 SUPERFAMILY SSF53187 106 378 8.73E-56 T 22-04-2016 RPIC_RS00580 4a23e3d719444310b9294a257efe5e62 146 SUPERFAMILY SSF54427 34 144 5.7E-34 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS00580 4a23e3d719444310b9294a257efe5e62 146 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 11 143 30.388 T 22-04-2016 IPR023006 Uncharacterised protein family UPF0225 RPIC_RS00580 4a23e3d719444310b9294a257efe5e62 146 Gene3D G3DSA:3.10.450.50 14 144 5.0E-45 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 Gene3D G3DSA:3.80.30.20 145 377 3.6E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 SMART SM00729 146 367 3.3E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 Pfam PF01938 TRAM domain 380 446 2.6E-13 T 22-04-2016 IPR002792 TRAM domain RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 PANTHER PTHR11918:SF43 1 446 5.2E-198 T 22-04-2016 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 SUPERFAMILY SSF102114 127 372 5.23E-61 T 22-04-2016 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 Pfam PF04055 Radical SAM superfamily 150 325 4.5E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 Pfam PF00919 Uncharacterized protein family UPF0004 3 103 2.4E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 444 4.3E-146 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 PANTHER PTHR11918 1 446 5.2E-198 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 2 448 73.796 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RPIC_RS02005 bff277d130fba367d5866086695ce0ef 456 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 3 446 2.4E-172 T 22-04-2016 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 SUPERFAMILY SSF47203 363 510 4.51E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 507 3.6E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 138 236 5.8E-20 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Gene3D G3DSA:1.20.140.10 353 510 2.2E-32 T 22-04-2016 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 331 2.2E-8 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Pfam PF09317 Domain of unknown function (DUF1974) 517 807 4.1E-108 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 PANTHER PTHR10909:SF283 52 536 7.8E-226 T 22-04-2016 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Gene3D G3DSA:1.10.540.10 98 237 2.0E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 Gene3D G3DSA:2.40.110.10 240 352 3.9E-16 T 22-04-2016 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 SUPERFAMILY SSF56645 119 358 2.36E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS02050 d534d7910eb65c40c2f71de7f4540c49 835 PANTHER PTHR10909 52 536 7.8E-226 T 22-04-2016 RPIC_RS01900 56ab771d9e22ac061285d293366359f9 230 SUPERFAMILY SSF53448 1 227 1.22E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS01900 56ab771d9e22ac061285d293366359f9 230 Pfam PF00483 Nucleotidyl transferase 1 129 7.9E-20 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RPIC_RS01900 56ab771d9e22ac061285d293366359f9 230 Gene3D G3DSA:3.90.550.10 1 228 2.5E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS01900 56ab771d9e22ac061285d293366359f9 230 PANTHER PTHR22572 1 115 4.9E-35 T 22-04-2016 RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 SUPERFAMILY SSF75217 2 154 3.07E-43 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 PANTHER PTHR12029:SF31 1 154 2.7E-71 T 22-04-2016 RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 PIRSF PIRSF029256 1 156 4.7E-64 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 Gene3D G3DSA:3.40.1280.10 1 155 5.1E-66 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 32.724 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 PANTHER PTHR12029 1 154 2.7E-71 T 22-04-2016 RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 3.7E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC_RS01040 783c92a033afa17989d793721eba0a0e 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 9.6E-59 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RPIC_RS18505 c9c847708f9ce4f1c0f9a94c7a81485a 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 1.4E-20 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC_RS18505 c9c847708f9ce4f1c0f9a94c7a81485a 327 PANTHER PTHR10366 2 325 1.2E-90 T 22-04-2016 RPIC_RS18505 c9c847708f9ce4f1c0f9a94c7a81485a 327 PANTHER PTHR10366:SF228 2 325 1.2E-90 T 22-04-2016 RPIC_RS18505 c9c847708f9ce4f1c0f9a94c7a81485a 327 Gene3D G3DSA:3.90.25.10 195 306 3.4E-41 T 22-04-2016 RPIC_RS18505 c9c847708f9ce4f1c0f9a94c7a81485a 327 SUPERFAMILY SSF51735 1 323 8.55E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18505 c9c847708f9ce4f1c0f9a94c7a81485a 327 Gene3D G3DSA:3.40.50.720 2 194 5.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 Pfam PF16360 GTP-binding GTPase Middle Region 117 196 1.7E-24 T 22-04-2016 IPR032305 GTP-binding protein, middle domain RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 13 366 3.1E-141 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 Gene3D G3DSA:3.40.50.300 202 367 2.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 Pfam PF01926 50S ribosome-binding GTPase 204 322 1.6E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 PANTHER PTHR10229:SF0 10 366 2.2E-146 T 22-04-2016 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 SUPERFAMILY SSF52540 202 369 1.31E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 PANTHER PTHR10229 10 366 2.2E-146 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 Pfam PF13167 GTP-binding GTPase N-terminal 28 114 1.3E-28 T 22-04-2016 IPR025121 GTPase HflX, N-terminal RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 Hamap MF_00900 GTPase HflX [hflX]. 30 382 44.016 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 1.1E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 1.1E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS05290 d54943662e4b875b1999a9c48f4428ac 417 PIRSF PIRSF006809 5 376 3.8E-135 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 RPIC_RS23310 e58796f3adc4ae1b8bd1ad80697ec33e 228 SUPERFAMILY SSF56300 83 222 1.14E-17 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS23310 e58796f3adc4ae1b8bd1ad80697ec33e 228 PANTHER PTHR34990 68 228 8.3E-54 T 22-04-2016 RPIC_RS23310 e58796f3adc4ae1b8bd1ad80697ec33e 228 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 82 228 66.569 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RPIC_RS23310 e58796f3adc4ae1b8bd1ad80697ec33e 228 PANTHER PTHR34990:SF1 68 228 8.3E-54 T 22-04-2016 RPIC_RS23310 e58796f3adc4ae1b8bd1ad80697ec33e 228 Gene3D G3DSA:3.60.21.10 83 206 9.1E-12 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS23310 e58796f3adc4ae1b8bd1ad80697ec33e 228 Pfam PF00149 Calcineurin-like phosphoesterase 82 170 1.3E-5 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS11795 fe795cb4bffa1169a43800962af84121 207 Hamap MF_00528 Septum formation protein Maf [maf]. 10 207 31.05 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS11795 fe795cb4bffa1169a43800962af84121 207 SUPERFAMILY SSF52972 9 201 1.5E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC_RS11795 fe795cb4bffa1169a43800962af84121 207 PIRSF PIRSF006305 5 207 1.0E-49 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS11795 fe795cb4bffa1169a43800962af84121 207 TIGRFAM TIGR00172 maf: septum formation protein Maf 10 200 1.6E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS11795 fe795cb4bffa1169a43800962af84121 207 Gene3D G3DSA:3.90.950.10 10 205 2.6E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC_RS11795 fe795cb4bffa1169a43800962af84121 207 Pfam PF02545 Maf-like protein 10 202 3.2E-51 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 20 239 3.4E-95 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 Gene3D G3DSA:3.40.50.300 20 240 1.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 PANTHER PTHR24220 22 241 2.2E-111 T 22-04-2016 RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 Pfam PF00005 ABC transporter 40 188 5.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 SUPERFAMILY SSF52540 21 240 4.94E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 PANTHER PTHR24220:SF111 22 241 2.2E-111 T 22-04-2016 RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS04745 5dd869095d98dd038e371f9a65d46166 242 SMART SM00382 49 237 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 Gene3D G3DSA:3.40.190.10 93 180 1.1E-18 T 22-04-2016 RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 PANTHER PTHR30419 1 297 9.9E-90 T 22-04-2016 RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 Gene3D G3DSA:1.10.10.10 7 91 4.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 PANTHER PTHR30419:SF2 1 297 9.9E-90 T 22-04-2016 RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 SUPERFAMILY SSF53850 93 297 1.38E-34 T 22-04-2016 RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 Gene3D G3DSA:3.40.190.10 181 269 1.0E-20 T 22-04-2016 RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 SUPERFAMILY SSF46785 5 115 6.53E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05165 9e5183378463bde1928a4546a5dbc14b 304 Pfam PF03466 LysR substrate binding domain 92 298 1.8E-30 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 PANTHER PTHR30097 73 520 1.2E-116 T 22-04-2016 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 Gene3D G3DSA:2.40.50.100 330 361 1.6E-13 T 22-04-2016 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 Gene3D G3DSA:2.40.50.100 221 254 1.6E-13 T 22-04-2016 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 TIGRFAM TIGR00999 8a0102: membrane fusion protein cluster 2 protein 240 508 5.4E-102 T 22-04-2016 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB GO:0030001|GO:0046873 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 PANTHER PTHR30097:SF4 73 520 1.2E-116 T 22-04-2016 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 194 498 5.4E-51 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 Pfam PF00529 HlyD membrane-fusion protein of T1SS 195 500 2.1E-12 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 SUPERFAMILY SSF111369 217 439 2.48E-24 T 22-04-2016 RPIC_RS08650 c168320e5b30cb9780015124398d9b04 520 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 205 435 4.6E-44 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Pfam PF01842 ACT domain 290 355 2.1E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 SMART SM00830 24 103 1.0E-28 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Gene3D G3DSA:1.20.59.10 9 101 1.7E-24 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 TIGRFAM TIGR01807 CM_P2: chorismate mutase 20 93 3.7E-32 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 SUPERFAMILY SSF55021 274 369 2.02E-27 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Gene3D G3DSA:3.40.190.10 102 189 2.1E-32 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 SUPERFAMILY SSF53850 104 287 1.05E-59 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Pfam PF00800 Prephenate dehydratase 105 279 1.5E-61 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 PANTHER PTHR21022 19 368 1.4E-124 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Gene3D G3DSA:3.40.190.10 190 267 3.9E-26 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 SUPERFAMILY SSF48600 19 106 1.98E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Pfam PF01817 Chorismate mutase type II 24 101 7.7E-24 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 255 277 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 PANTHER PTHR21022:SF0 19 368 1.4E-124 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 Gene3D G3DSA:3.30.70.260 284 370 1.4E-29 T 22-04-2016 RPIC_RS03790 3448922f6775c8fa9e156a4e07e76e59 371 PIRSF PIRSF001500 13 371 5.7E-149 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 RPIC_RS17820 f81180f44c007ca54b32fd2cb5ba04e8 268 PIRSF PIRSF002854 1 268 3.6E-104 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS17820 f81180f44c007ca54b32fd2cb5ba04e8 268 PANTHER PTHR30429 1 268 4.6E-124 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS17820 f81180f44c007ca54b32fd2cb5ba04e8 268 SUPERFAMILY SSF53850 29 268 1.15E-88 T 22-04-2016 RPIC_RS17820 f81180f44c007ca54b32fd2cb5ba04e8 268 Gene3D G3DSA:3.40.190.10 27 157 2.6E-57 T 22-04-2016 RPIC_RS17820 f81180f44c007ca54b32fd2cb5ba04e8 268 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 266 4.5E-84 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS17820 f81180f44c007ca54b32fd2cb5ba04e8 268 Pfam PF03180 NLPA lipoprotein 30 268 5.8E-94 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS00360 e55f3f5a813980626460bf15933a5b0a 138 SUPERFAMILY SSF54593 3 135 1.09E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS00360 e55f3f5a813980626460bf15933a5b0a 138 PANTHER PTHR36437 1 135 3.1E-23 T 22-04-2016 RPIC_RS00360 e55f3f5a813980626460bf15933a5b0a 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 128 1.0E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS00360 e55f3f5a813980626460bf15933a5b0a 138 Gene3D G3DSA:3.10.180.10 1 132 4.9E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS12040 5f8fc0c610f6cc071703131b182154eb 290 PANTHER PTHR22572 6 288 8.8E-100 T 22-04-2016 RPIC_RS12040 5f8fc0c610f6cc071703131b182154eb 290 SUPERFAMILY SSF53448 2 271 4.8E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS12040 5f8fc0c610f6cc071703131b182154eb 290 PANTHER PTHR22572:SF14 6 288 8.8E-100 T 22-04-2016 RPIC_RS12040 5f8fc0c610f6cc071703131b182154eb 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 267 9.2E-114 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 RPIC_RS12040 5f8fc0c610f6cc071703131b182154eb 290 Pfam PF00483 Nucleotidyl transferase 11 268 1.8E-26 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RPIC_RS12040 5f8fc0c610f6cc071703131b182154eb 290 Gene3D G3DSA:3.90.550.10 4 277 1.5E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS11875 90bf4ccc34d05b8e2c8bc99a9161bb67 271 SUPERFAMILY SSF56281 27 239 1.97E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS11875 90bf4ccc34d05b8e2c8bc99a9161bb67 271 PANTHER PTHR32145:SF7 4 251 5.7E-70 T 22-04-2016 RPIC_RS11875 90bf4ccc34d05b8e2c8bc99a9161bb67 271 SMART SM00849 29 221 3.3E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS11875 90bf4ccc34d05b8e2c8bc99a9161bb67 271 PANTHER PTHR32145 4 251 5.7E-70 T 22-04-2016 RPIC_RS11875 90bf4ccc34d05b8e2c8bc99a9161bb67 271 Gene3D G3DSA:3.60.15.10 27 241 1.9E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS11875 90bf4ccc34d05b8e2c8bc99a9161bb67 271 Pfam PF00753 Metallo-beta-lactamase superfamily 27 221 1.9E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 Gene3D G3DSA:3.10.580.10 44 164 8.1E-13 T 22-04-2016 RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 Pfam PF00571 CBS domain 46 89 4.2E-5 T 22-04-2016 IPR000644 CBS domain RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 SMART SM00116 112 163 14.0 T 22-04-2016 IPR000644 CBS domain RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 SMART SM00116 44 92 0.0046 T 22-04-2016 IPR000644 CBS domain RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 SUPERFAMILY SSF54631 44 164 2.92E-12 T 22-04-2016 RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 198 268 9.3E-12 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 SMART SM00267 160 346 8.3E-6 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 269 1.7E-11 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 SUPERFAMILY SSF55073 176 345 1.1E-20 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS01365 ed8c9eb95b9aa22de59a52bf072b9735 355 Gene3D G3DSA:3.30.70.270 174 344 2.9E-20 T 22-04-2016 RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 PANTHER PTHR24023 66 344 3.4E-70 T 22-04-2016 RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 PANTHER PTHR24023:SF545 66 344 3.4E-70 T 22-04-2016 RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 SUPERFAMILY SSF89796 3 343 8.24E-91 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 Gene3D G3DSA:3.30.1540.10 229 296 6.0E-6 T 22-04-2016 RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 Pfam PF02515 CoA-transferase family III 9 342 1.6E-76 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 Gene3D G3DSA:3.40.50.10540 297 339 3.6E-75 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS12960 4f943fa7ff9d75283106df04712e7561 349 Gene3D G3DSA:3.40.50.10540 6 213 3.6E-75 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 PANTHER PTHR30024:SF8 17 267 1.7E-55 T 22-04-2016 RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 Pfam PF13379 NMT1-like family 22 255 3.7E-31 T 22-04-2016 RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 PANTHER PTHR30024 17 267 1.7E-55 T 22-04-2016 RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 SUPERFAMILY SSF53850 26 277 3.37E-45 T 22-04-2016 RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 SMART SM00062 27 268 0.0042 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 Gene3D G3DSA:3.40.190.10 45 131 2.8E-5 T 22-04-2016 RPIC_RS05175 644ca29a2d8f7ce7ae5e4ab4068b1d80 337 Gene3D G3DSA:3.40.190.10 132 245 3.7E-23 T 22-04-2016 RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 Gene3D G3DSA:3.30.420.10 5 196 1.5E-76 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 Pfam PF08411 Exonuclease C-terminal 208 475 4.4E-96 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 PANTHER PTHR11046 5 477 9.1E-196 T 22-04-2016 RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 Pfam PF00929 Exonuclease 8 189 9.9E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 PANTHER PTHR11046:SF2 5 477 9.1E-196 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 PIRSF PIRSF000977 2 479 5.7E-206 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 RPIC_RS16860 9f6d7116587f96bb3f57cd6a4436884b 479 SUPERFAMILY SSF53098 6 476 1.14E-126 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 Pfam PF03466 LysR substrate binding domain 90 288 3.7E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 Gene3D G3DSA:1.10.10.10 4 87 4.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 PANTHER PTHR30126:SF11 4 246 4.6E-55 T 22-04-2016 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 SUPERFAMILY SSF53850 90 288 4.49E-32 T 22-04-2016 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 Gene3D G3DSA:3.40.190.10 91 187 3.1E-20 T 22-04-2016 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 Gene3D G3DSA:3.40.190.10 188 263 6.7E-13 T 22-04-2016 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 PANTHER PTHR30126 4 246 4.6E-55 T 22-04-2016 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17925 4103a9f0c4f852a5ea2ab7ec441e906e 294 SUPERFAMILY SSF46785 4 113 3.76E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16490 cf75dcf79ff63d75d7b0177b76e2e3ae 296 Gene3D G3DSA:1.10.3720.10 56 283 3.7E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS16490 cf75dcf79ff63d75d7b0177b76e2e3ae 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 281 1.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS16490 cf75dcf79ff63d75d7b0177b76e2e3ae 296 SUPERFAMILY SSF161098 51 275 4.19E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS16490 cf75dcf79ff63d75d7b0177b76e2e3ae 296 PANTHER PTHR30193 1 293 3.8E-74 T 22-04-2016 RPIC_RS16490 cf75dcf79ff63d75d7b0177b76e2e3ae 296 PANTHER PTHR30193:SF6 1 293 3.8E-74 T 22-04-2016 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 PANTHER PTHR21090 1 419 2.7E-186 T 22-04-2016 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 46.64 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 3.9E-174 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 8.0E-108 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 Gene3D G3DSA:3.65.10.10 21 223 2.6E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 Gene3D G3DSA:3.65.10.10 224 419 5.8E-59 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC_RS15950 ed5f74f5dcbe770e4345469e526385ee 421 SUPERFAMILY SSF55205 1 419 2.62E-141 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RPIC_RS17915 386baca5342e9e69dc874258c94aae5b 143 SUPERFAMILY SSF55961 4 142 2.93E-23 T 22-04-2016 RPIC_RS17915 386baca5342e9e69dc874258c94aae5b 143 Gene3D G3DSA:3.30.530.20 2 142 1.5E-48 T 22-04-2016 IPR023393 START-like domain RPIC_RS02830 e68d709f5a1d89682d6e9a1480b30c70 148 Pfam PF04138 GtrA-like protein 35 147 9.6E-18 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 Pfam PF01039 Carboxyl transferase domain 108 242 1.1E-13 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 SUPERFAMILY SSF52096 27 284 1.4E-85 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PANTHER PTHR22855 1 286 3.2E-154 T 22-04-2016 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 5.5E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 Gene3D G3DSA:3.90.226.10 21 288 3.4E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 5.9E-129 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.037 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS10495 d61ef0549bab0d6a54a16c972ea24490 290 PANTHER PTHR22855:SF17 1 286 3.2E-154 T 22-04-2016 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 SUPERFAMILY SSF52009 356 470 2.49E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Gene3D G3DSA:3.30.470.20 202 361 4.4E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Gene3D G3DSA:3.30.1490.20 9 199 1.2E-67 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 PIRSF PIRSF000854 5 795 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Gene3D G3DSA:3.50.30.10 378 479 1.4E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 PANTHER PTHR22931 10 792 0.0 T 22-04-2016 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 23 348 5.4E-116 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 460 4.8E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Gene3D G3DSA:3.20.20.60 486 792 2.7E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 SUPERFAMILY SSF56059 10 390 3.88E-108 T 22-04-2016 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 SUPERFAMILY SSF51621 469 792 6.81E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 11 792 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 PANTHER PTHR22931:SF7 10 792 0.0 T 22-04-2016 RPIC_RS06450 dba5d9e650ee8ed902289d13a7be683c 795 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 486 790 5.6E-60 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 SMART SM00729 145 374 1.5E-51 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 PANTHER PTHR11918:SF57 7 453 4.5E-215 T 22-04-2016 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 Gene3D G3DSA:2.40.50.140 389 453 2.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 Gene3D G3DSA:3.80.30.20 143 384 1.3E-68 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 Pfam PF00919 Uncharacterized protein family UPF0004 10 89 9.0E-19 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 451 6.2E-95 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 Pfam PF04055 Radical SAM superfamily 151 332 7.5E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 451 2.4E-167 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 PANTHER PTHR11918 7 453 4.5E-215 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 SUPERFAMILY SSF102114 122 378 1.83E-50 T 22-04-2016 RPIC_RS09375 f2bac9183196340288eeba96336a81fa 453 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 453 59.906 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 Gene3D G3DSA:1.20.1050.10 89 188 2.8E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 189 3.6E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 Pfam PF13409 Glutathione S-transferase, N-terminal domain 15 75 5.4E-8 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 PANTHER PTHR11260:SF154 1 202 1.6E-64 T 22-04-2016 RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 Gene3D G3DSA:3.40.30.10 1 88 2.2E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 PANTHER PTHR11260 1 202 1.6E-64 T 22-04-2016 RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 SUPERFAMILY SSF52833 1 84 1.29E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS05660 edc86ff9d4cb946033c5d4b4013306c0 203 SUPERFAMILY SSF47616 82 199 7.8E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835 1 164 2.4E-235 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835 188 255 2.4E-235 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835 275 416 2.4E-235 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 Gene3D G3DSA:3.40.718.10 11 416 3.9E-160 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835:SF52 1 164 2.4E-235 T 22-04-2016 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835:SF52 188 255 2.4E-235 T 22-04-2016 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 PANTHER PTHR11835:SF52 275 416 2.4E-235 T 22-04-2016 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 410 9.9E-113 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 416 1.5E-222 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 SMART SM01329 28 412 6.7E-170 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS13555 9e90c1f2e03896fadaa7242638965eb0 416 SUPERFAMILY SSF53659 2 416 6.34E-144 T 22-04-2016 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 Pfam PF00467 KOW motif 143 176 3.0E-6 T 22-04-2016 IPR005824 KOW RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 19 194 25.723 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 ProSitePatterns PS01014 Transcription termination factor nusG signature. 177 186 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 PANTHER PTHR30265 17 194 4.4E-81 T 22-04-2016 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 PRINTS PR00338 Transcription termination factor NUSG signature 74 86 2.4E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 PRINTS PR00338 Transcription termination factor NUSG signature 152 167 2.4E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 PRINTS PR00338 Transcription termination factor NUSG signature 170 186 2.4E-19 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 SMART SM00739 140 167 2.2E-5 T 22-04-2016 IPR005824 KOW RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 SUPERFAMILY SSF50104 138 194 1.86E-19 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 SUPERFAMILY SSF82679 19 130 1.83E-39 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 Gene3D G3DSA:3.30.70.940 19 131 7.1E-46 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 22 194 3.4E-68 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 SMART SM00738 19 128 1.6E-48 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 Pfam PF02357 Transcription termination factor nusG 20 125 1.1E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 RPIC_RS16390 bb00ba2f26625a497ca8e7f72b7bd38f 194 Gene3D G3DSA:2.30.30.30 133 194 1.1E-30 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 SUPERFAMILY SSF53850 13 263 1.7E-60 T 22-04-2016 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 Gene3D G3DSA:3.40.190.10 223 263 3.5E-33 T 22-04-2016 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 Gene3D G3DSA:3.40.190.10 36 118 3.5E-33 T 22-04-2016 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 PANTHER PTHR18966 14 276 4.5E-45 T 22-04-2016 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 PANTHER PTHR18966:SF191 14 276 4.5E-45 T 22-04-2016 RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 261 1.0E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 SMART SM00062 39 263 1.2E-58 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS12140 07690207dcbadd26d275c99e3e633fbd 281 Gene3D G3DSA:3.40.190.10 119 222 3.3E-20 T 22-04-2016 RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 Gene3D G3DSA:3.90.180.10 1 144 1.2E-45 T 22-04-2016 IPR011032 GroES-like RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 SUPERFAMILY SSF50129 1 140 2.59E-39 T 22-04-2016 IPR011032 GroES-like RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 Gene3D G3DSA:3.40.50.720 145 262 5.9E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 2.9E-13 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 SMART SM00829 10 322 4.2E-46 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 Pfam PF00107 Zinc-binding dehydrogenase 151 279 1.1E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 PANTHER PTHR11695 15 324 2.5E-129 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 PANTHER PTHR11695:SF31 15 324 2.5E-129 T 22-04-2016 RPIC_RS05200 25244bc7d1ec80b360dfe1c0a695f086 324 SUPERFAMILY SSF51735 116 290 5.64E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00720 74da5667f9355f252562ba02f9ceb24f 346 PANTHER PTHR21091:SF112 16 344 9.0E-157 T 22-04-2016 RPIC_RS00720 74da5667f9355f252562ba02f9ceb24f 346 Gene3D G3DSA:3.20.20.330 11 340 7.9E-120 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC_RS00720 74da5667f9355f252562ba02f9ceb24f 346 PANTHER PTHR21091 16 344 9.0E-157 T 22-04-2016 RPIC_RS00720 74da5667f9355f252562ba02f9ceb24f 346 Pfam PF02574 Homocysteine S-methyltransferase 22 330 2.3E-92 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC_RS00720 74da5667f9355f252562ba02f9ceb24f 346 SUPERFAMILY SSF82282 13 341 4.19E-102 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 32 212 2.3E-59 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 Pfam PF02195 ParB-like nuclease domain 36 128 1.7E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 SMART SM00470 34 128 1.0E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 SUPERFAMILY SSF109709 121 227 2.28E-34 T 22-04-2016 RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 PANTHER PTHR33375 1 301 6.2E-92 T 22-04-2016 RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 PANTHER PTHR33375:SF1 1 301 6.2E-92 T 22-04-2016 RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 SUPERFAMILY SSF110849 35 130 1.39E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS17445 531717d16467c31cad41d74b7a0afc9c 303 Gene3D G3DSA:3.90.1530.10 31 134 1.9E-37 T 22-04-2016 RPIC_RS17100 1212e265016996a408e6d208c831b711 165 Pfam PF08534 Redoxin 31 154 3.4E-13 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC_RS17100 1212e265016996a408e6d208c831b711 165 SUPERFAMILY SSF52833 7 153 5.79E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17100 1212e265016996a408e6d208c831b711 165 Gene3D G3DSA:3.40.30.10 12 156 1.3E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 Gene3D G3DSA:3.40.190.10 85 193 9.7E-18 T 22-04-2016 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 PANTHER PTHR30126 2 286 4.4E-53 T 22-04-2016 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 Pfam PF03466 LysR substrate binding domain 88 288 9.2E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 SUPERFAMILY SSF53850 89 291 6.64E-33 T 22-04-2016 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 Gene3D G3DSA:1.10.10.10 4 79 5.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 Gene3D G3DSA:3.40.190.10 194 259 2.1E-11 T 22-04-2016 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13620 3a1b238741c217d37d9e93b38af2e9d6 294 SUPERFAMILY SSF46785 4 79 2.95E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 SMART SM00267 252 423 2.4E-64 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 SUPERFAMILY SSF55073 268 425 4.24E-51 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Pfam PF00563 EAL domain 439 674 6.5E-74 T 22-04-2016 IPR001633 EAL domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Gene3D G3DSA:3.30.70.270 265 431 3.6E-58 T 22-04-2016 RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Gene3D G3DSA:3.20.20.450 436 683 5.3E-103 T 22-04-2016 IPR001633 EAL domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 SUPERFAMILY SSF141868 439 682 4.18E-92 T 22-04-2016 IPR001633 EAL domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 PANTHER PTHR10799 144 533 4.2E-88 T 22-04-2016 RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 421 2.4E-42 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 SMART SM00052 433 679 2.7E-127 T 22-04-2016 IPR001633 EAL domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 1.4E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 246 6.3E-13 T 22-04-2016 IPR005330 MHYT domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 172 3.5E-19 T 22-04-2016 IPR005330 MHYT domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 110 5.9E-22 T 22-04-2016 IPR005330 MHYT domain RPIC_RS01895 185ab68d0c745005f74dc03271fa8187 685 PANTHER PTHR10799:SF774 144 533 4.2E-88 T 22-04-2016 RPIC_RS07225 d93888d62552be38cc5f9795aee53d31 90 PANTHER PTHR12735:SF24 6 89 2.9E-28 T 22-04-2016 RPIC_RS07225 d93888d62552be38cc5f9795aee53d31 90 Gene3D G3DSA:3.30.70.1500 4 85 7.6E-28 T 22-04-2016 RPIC_RS07225 d93888d62552be38cc5f9795aee53d31 90 PANTHER PTHR12735 6 89 2.9E-28 T 22-04-2016 RPIC_RS07225 d93888d62552be38cc5f9795aee53d31 90 SUPERFAMILY SSF82657 4 88 6.8E-27 T 22-04-2016 IPR002634 BolA protein RPIC_RS07225 d93888d62552be38cc5f9795aee53d31 90 Pfam PF01722 BolA-like protein 12 88 1.5E-28 T 22-04-2016 IPR002634 BolA protein RPIC_RS07225 d93888d62552be38cc5f9795aee53d31 90 PIRSF PIRSF003113 1 90 1.0E-26 T 22-04-2016 IPR002634 BolA protein RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 Gene3D G3DSA:3.40.50.2300 2 123 4.2E-10 T 22-04-2016 RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 PANTHER PTHR13696 70 381 3.0E-28 T 22-04-2016 RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 Gene3D G3DSA:3.40.50.300 130 365 2.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 Pfam PF13614 AAA domain 132 289 9.7E-15 T 22-04-2016 IPR025669 AAA domain RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 SUPERFAMILY SSF52540 131 374 1.52E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 SUPERFAMILY SSF52172 1 129 1.32E-12 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS02865 6c0ef3ccade03fa622b62e891f612ad4 402 Pfam PF00072 Response regulator receiver domain 43 116 2.4E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 SUPERFAMILY SSF48452 194 271 5.0E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 SUPERFAMILY SSF48452 114 167 5.0E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PANTHER PTHR10438 3 108 8.0E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PANTHER PTHR10438 210 231 8.0E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 Gene3D G3DSA:1.25.40.10 196 280 7.4E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 Pfam PF00085 Thioredoxin 4 104 1.0E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 Gene3D G3DSA:1.25.40.10 110 167 1.0E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PRINTS PR00421 Thioredoxin family signature 70 81 9.0E-5 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PRINTS PR00421 Thioredoxin family signature 30 39 9.0E-5 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PRINTS PR00421 Thioredoxin family signature 22 30 9.0E-5 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 Pfam PF14561 Tetratricopeptide repeat 194 280 1.1E-23 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 Pfam PF14559 Tetratricopeptide repeat 122 184 2.5E-7 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 TIGRFAM TIGR01068 thioredoxin: thioredoxin 5 104 1.0E-30 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 SMART SM00028 213 246 88.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 SMART SM00028 110 143 0.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 Gene3D G3DSA:3.40.30.10 3 105 2.7E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PANTHER PTHR10438:SF264 3 108 8.0E-38 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 PANTHER PTHR10438:SF264 210 231 8.0E-38 T 22-04-2016 RPIC_RS03555 f862e5e497af62c8b4595540601d04fc 281 SUPERFAMILY SSF52833 3 108 2.65E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS19335 140b4a73747998260178493a78a6da49 260 PANTHER PTHR11935:SF109 124 222 5.3E-15 T 22-04-2016 RPIC_RS19335 140b4a73747998260178493a78a6da49 260 PANTHER PTHR11935 124 222 5.3E-15 T 22-04-2016 RPIC_RS19335 140b4a73747998260178493a78a6da49 260 Gene3D G3DSA:3.60.15.10 115 231 3.9E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS19335 140b4a73747998260178493a78a6da49 260 SUPERFAMILY SSF56281 115 238 5.11E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS19335 140b4a73747998260178493a78a6da49 260 Pfam PF00753 Metallo-beta-lactamase superfamily 141 224 4.0E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82866 294 505 3.14E-38 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 Gene3D G3DSA:3.30.70.1430 46 141 5.3E-23 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 Gene3D G3DSA:3.30.2090.10 724 807 1.2E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 Gene3D G3DSA:3.30.2090.10 185 269 6.4E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 Pfam PF00873 AcrB/AcrD/AcrF family 8 1035 2.9E-237 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82714 185 270 3.01E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PANTHER PTHR32063:SF19 2 1038 0.0 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82714 723 806 8.5E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82693 46 127 2.14E-19 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.2E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.2E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.2E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.2E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82693 271 328 2.88E-21 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82866 805 1038 7.32E-47 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1041 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 PANTHER PTHR32063 2 1038 0.0 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 SUPERFAMILY SSF82693 137 184 2.88E-21 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 Gene3D G3DSA:1.10.3850.10 275 507 1.2E-65 T 22-04-2016 RPIC_RS08090 1cf66c9ab3df6cf2c81a615b2323c363 1055 Gene3D G3DSA:1.10.3850.10 815 1038 3.7E-50 T 22-04-2016 RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 SUPERFAMILY SSF46785 31 99 3.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 SMART SM00345 37 95 2.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 SMART SM00895 105 229 7.5E-21 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 Pfam PF07729 FCD domain 105 228 1.7E-27 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 Gene3D G3DSA:1.10.10.10 26 97 3.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 PANTHER PTHR11751 32 121 6.6E-22 T 22-04-2016 RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 SUPERFAMILY SSF48008 101 236 8.89E-30 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 37 95 1.9E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS02520 16544de7d37d925c22f5b4be416d0860 238 Gene3D G3DSA:1.20.120.530 98 236 3.6E-33 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 899 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 Pfam PF00330 Aconitase family (aconitate hydratase) 70 563 4.2E-178 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 171 179 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 494 507 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 432 443 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 147 160 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 214 229 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 290 303 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 200 213 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 370 384 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PRINTS PR00415 Aconitase family signature 276 289 4.3E-40 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670:SF1 668 713 0.0 T 22-04-2016 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670:SF1 1 391 0.0 T 22-04-2016 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670:SF1 758 901 0.0 T 22-04-2016 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670:SF1 417 651 0.0 T 22-04-2016 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 SUPERFAMILY SSF52016 636 899 1.14E-80 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670 668 713 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670 1 391 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670 758 901 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 PANTHER PTHR11670 417 651 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 Gene3D G3DSA:3.40.1060.10 247 365 3.0E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 Gene3D G3DSA:3.20.19.10 637 899 4.2E-79 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 ProSitePatterns PS01244 Aconitase family signature 2. 494 507 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 Pfam PF00694 Aconitase C-terminal domain 693 825 9.2E-41 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 Gene3D G3DSA:3.30.499.10 367 576 3.4E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 Gene3D G3DSA:3.30.499.10 25 246 2.2E-76 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 ProSitePatterns PS00450 Aconitase family signature 1. 428 444 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS10610 c0c62fab19b7a309e12e92ff7bbbcb74 901 SUPERFAMILY SSF53732 18 626 2.09E-216 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS11280 3e8223c994987bdccdaa899998018f4d 887 SMART SM00047 3 141 8.3E-4 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RPIC_RS11280 3e8223c994987bdccdaa899998018f4d 887 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 13 133 4.5E-14 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RPIC_RS11280 3e8223c994987bdccdaa899998018f4d 887 Gene3D G3DSA:1.10.530.10 5 40 4.5E-5 T 22-04-2016 RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 Gene3D G3DSA:3.30.1310.10 1 115 3.6E-46 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 Pfam PF02575 YbaB/EbfC DNA-binding family 10 100 7.1E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 PANTHER PTHR33449 1 115 8.1E-42 T 22-04-2016 RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 PIRSF PIRSF004555 2 115 9.9E-37 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 106 2.2E-29 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 SUPERFAMILY SSF82607 7 99 1.07E-32 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC_RS05145 f0c2fe9495e48ef8ce4a01913b6c0d49 115 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 99 22.486 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 SUPERFAMILY SSF56281 555 820 2.57E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 PANTHER PTHR30619 142 840 4.5E-164 T 22-04-2016 RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 PANTHER PTHR30619 1 124 4.5E-164 T 22-04-2016 RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 261 461 3.3E-23 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 Gene3D G3DSA:3.60.15.10 556 792 1.8E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 Pfam PF00753 Metallo-beta-lactamase superfamily 566 762 1.0E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 Pfam PF03772 Competence protein 240 526 9.7E-61 T 22-04-2016 IPR004477 ComEC/Rec2-related protein RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 Pfam PF13567 Domain of unknown function (DUF4131) 9 194 5.7E-27 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 PANTHER PTHR30619:SF2 142 840 4.5E-164 T 22-04-2016 RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 PANTHER PTHR30619:SF2 1 124 4.5E-164 T 22-04-2016 RPIC_RS04755 f3f4a9b9e88a8ca0dcc2978df6a77c6f 840 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 152 796 1.0E-102 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 SUPERFAMILY SSF54427 182 296 1.13E-14 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 SUPERFAMILY SSF88659 100 173 4.67E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 SUPERFAMILY SSF88946 15 79 4.32E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 Gene3D G3DSA:3.10.450.50 183 296 1.2E-10 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 Pfam PF04542 Sigma-70 region 2 19 82 7.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 PANTHER PTHR30173:SF25 19 298 2.6E-85 T 22-04-2016 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 173 4.4E-18 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 18 298 1.6E-101 T 22-04-2016 IPR014303 RNA polymerase sigma-70, ECF type RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 Pfam PF08281 Sigma-70, region 4 121 167 1.0E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 Gene3D G3DSA:1.10.10.10 119 173 3.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 PANTHER PTHR30173 19 298 2.6E-85 T 22-04-2016 RPIC_RS00125 d73ea6e04dc89d8df90b14982c641021 302 Gene3D G3DSA:1.10.1740.10 17 84 2.2E-14 T 22-04-2016 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 Pfam PF13499 EF-hand domain pair 87 147 9.0E-10 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 SMART SM00054 153 179 4.4 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 SMART SM00054 85 113 0.83 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 SMART SM00054 124 152 0.019 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 SUPERFAMILY SSF47473 64 177 6.29E-25 T 22-04-2016 IPR011992 EF-hand domain pair RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 Gene3D G3DSA:1.10.238.10 64 182 1.1E-26 T 22-04-2016 IPR011992 EF-hand domain pair RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 Pfam PF13202 EF hand 64 79 2.6E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 Pfam PF13202 EF hand 156 174 2.1E-5 T 22-04-2016 IPR002048 EF-hand domain GO:0005509 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 PANTHER PTHR10891 64 177 2.4E-13 T 22-04-2016 RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 94 106 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 160 172 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC_RS16780 add3bf2b6d712a5e6e17e851f0235e2c 205 ProSitePatterns PS00018 EF-hand calcium-binding domain. 133 145 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 261 282 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 25 554 3.8E-235 T 22-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 PANTHER PTHR32303:SF2 241 358 3.7E-117 T 22-04-2016 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 PANTHER PTHR32303:SF2 399 581 3.7E-117 T 22-04-2016 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 PANTHER PTHR32303:SF2 1 221 3.7E-117 T 22-04-2016 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 Pfam PF13360 PQQ-like domain 72 224 3.3E-16 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 Gene3D G3DSA:2.140.10.10 16 583 6.8E-153 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 Pfam PF01011 PQQ enzyme repeat 501 536 4.0E-9 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 PANTHER PTHR32303 241 358 3.7E-117 T 22-04-2016 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 PANTHER PTHR32303 399 581 3.7E-117 T 22-04-2016 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 PANTHER PTHR32303 1 221 3.7E-117 T 22-04-2016 RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SMART SM00564 182 219 2.5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SMART SM00564 136 168 0.0095 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SMART SM00564 286 313 17.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SMART SM00564 88 119 1.2E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SMART SM00564 443 485 0.42 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SMART SM00564 494 526 0.0017 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS12295 cb9ab204b17184f7ade489aee7f20912 584 SUPERFAMILY SSF50998 34 577 4.45E-162 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 489 7.6E-15 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 1.6E-19 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.206 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SUPERFAMILY SSF47794 358 418 4.71E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SUPERFAMILY SSF47794 429 490 1.16E-14 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SMART SM00322 303 381 0.0071 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SUPERFAMILY SSF54814 281 343 3.47E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SUPERFAMILY SSF69705 1 129 2.35E-39 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Gene3D G3DSA:3.30.300.20 201 279 1.1E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SUPERFAMILY SSF50249 135 201 2.31E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 6.0E-10 T 22-04-2016 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 PANTHER PTHR22648:SF0 1 448 6.6E-158 T 22-04-2016 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Pfam PF08529 NusA N-terminal domain 4 127 1.1E-36 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Gene3D G3DSA:3.30.300.20 280 348 9.3E-29 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Pfam PF13184 NusA-like KH domain 232 299 1.8E-23 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SMART SM00316 136 202 7.9E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 PANTHER PTHR22648 1 448 6.6E-158 T 22-04-2016 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 SUPERFAMILY SSF54814 202 280 4.38E-27 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Gene3D G3DSA:2.40.50.140 139 200 3.5E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Gene3D G3DSA:1.10.150.20 357 422 2.6E-23 T 22-04-2016 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Gene3D G3DSA:1.10.150.20 429 490 2.7E-23 T 22-04-2016 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 343 7.7E-122 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Pfam PF00575 S1 RNA binding domain 139 198 4.8E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS05550 ca02860b7aedcda2d69ef23eb7cf982b 491 Gene3D G3DSA:3.30.1480.10 1 128 1.3E-43 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 TIGRFAM TIGR03734 PRTRC_parB: PRTRC system ParB family protein 15 554 2.5E-217 T 22-04-2016 IPR022396 ParB-related, ThiF-related cassette, ParB RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 3 178 1.9E-34 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 SMART SM00470 8 99 4.5E-23 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 Pfam PF02954 Bacterial regulatory protein, Fis family 121 142 1.6E-4 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 SUPERFAMILY SSF110849 5 103 4.36E-22 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 Gene3D G3DSA:3.90.1530.10 4 104 2.4E-27 T 22-04-2016 RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 Gene3D G3DSA:1.10.10.60 121 142 6.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 SUPERFAMILY SSF109709 93 199 7.32E-23 T 22-04-2016 RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 Pfam PF02195 ParB-like nuclease domain 10 98 1.1E-16 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS07875 1873603974710ab7392fcadf1b65dd61 554 PANTHER PTHR33375 1 199 2.8E-44 T 22-04-2016 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 Gene3D G3DSA:1.10.10.60 2 56 1.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 PANTHER PTHR30055 2 191 4.7E-23 T 22-04-2016 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 SUPERFAMILY SSF48498 77 191 5.09E-20 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 Gene3D G3DSA:1.10.357.10 57 194 8.7E-56 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 SUPERFAMILY SSF46689 2 69 2.67E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01700 64afc9e0ac9624088356441411e38160 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 5.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 Pfam PF01467 Cytidylyltransferase-like 34 139 1.6E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 21 162 6.4E-59 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 SUPERFAMILY SSF52374 30 160 2.76E-22 T 22-04-2016 RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 Gene3D G3DSA:3.40.50.620 31 149 2.1E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 32 96 2.8E-12 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 PANTHER PTHR10739 16 164 5.4E-35 T 22-04-2016 RPIC_RS00795 ad075c09ca11a8a1d48386be7e1137cc 165 PANTHER PTHR10739:SF26 16 164 5.4E-35 T 22-04-2016 RPIC_RS10905 7452578847524d933b3b396518a24e12 334 Pfam PF00107 Zinc-binding dehydrogenase 160 280 1.6E-30 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS10905 7452578847524d933b3b396518a24e12 334 PANTHER PTHR11695 15 331 8.3E-127 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS10905 7452578847524d933b3b396518a24e12 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 332 1.1E-144 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- RPIC_RS10905 7452578847524d933b3b396518a24e12 334 PANTHER PTHR11695:SF610 15 331 8.3E-127 T 22-04-2016 RPIC_RS10905 7452578847524d933b3b396518a24e12 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 102 7.5E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC_RS10905 7452578847524d933b3b396518a24e12 334 SMART SM00829 10 331 6.0E-29 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS10905 7452578847524d933b3b396518a24e12 334 Gene3D G3DSA:3.90.180.10 1 155 9.1E-41 T 22-04-2016 IPR011032 GroES-like RPIC_RS10905 7452578847524d933b3b396518a24e12 334 SUPERFAMILY SSF51735 115 295 1.51E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10905 7452578847524d933b3b396518a24e12 334 Gene3D G3DSA:3.40.50.720 156 270 1.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10905 7452578847524d933b3b396518a24e12 334 SUPERFAMILY SSF50129 1 141 1.34E-38 T 22-04-2016 IPR011032 GroES-like RPIC_RS02655 ee68b32cc01f5f96454758cc32512c36 414 SUPERFAMILY SSF51735 7 160 5.5E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02655 ee68b32cc01f5f96454758cc32512c36 414 Gene3D G3DSA:3.40.50.720 8 164 6.6E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02655 ee68b32cc01f5f96454758cc32512c36 414 PANTHER PTHR12286:SF4 1 412 2.2E-127 T 22-04-2016 RPIC_RS02655 ee68b32cc01f5f96454758cc32512c36 414 PANTHER PTHR12286 1 412 2.2E-127 T 22-04-2016 RPIC_RS02655 ee68b32cc01f5f96454758cc32512c36 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 8 139 1.7E-18 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 RPIC_RS08300 8348af40696ba3a3b1ead1a93173c4cb 258 SUPERFAMILY SSF56300 1 110 3.55E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS08300 8348af40696ba3a3b1ead1a93173c4cb 258 SUPERFAMILY SSF56300 156 244 3.55E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS08300 8348af40696ba3a3b1ead1a93173c4cb 258 PANTHER PTHR37844 1 238 1.3E-32 T 22-04-2016 RPIC_RS08300 8348af40696ba3a3b1ead1a93173c4cb 258 Pfam PF00149 Calcineurin-like phosphoesterase 1 220 1.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS08300 8348af40696ba3a3b1ead1a93173c4cb 258 Gene3D G3DSA:3.60.21.10 1 64 1.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS08300 8348af40696ba3a3b1ead1a93173c4cb 258 Gene3D G3DSA:3.60.21.10 148 234 1.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS14420 8348af40696ba3a3b1ead1a93173c4cb 258 SUPERFAMILY SSF56300 1 110 3.55E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS14420 8348af40696ba3a3b1ead1a93173c4cb 258 SUPERFAMILY SSF56300 156 244 3.55E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS14420 8348af40696ba3a3b1ead1a93173c4cb 258 PANTHER PTHR37844 1 238 1.3E-32 T 22-04-2016 RPIC_RS14420 8348af40696ba3a3b1ead1a93173c4cb 258 Pfam PF00149 Calcineurin-like phosphoesterase 1 220 1.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS14420 8348af40696ba3a3b1ead1a93173c4cb 258 Gene3D G3DSA:3.60.21.10 1 64 1.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS14420 8348af40696ba3a3b1ead1a93173c4cb 258 Gene3D G3DSA:3.60.21.10 148 234 1.6E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 SUPERFAMILY SSF53335 491 695 2.11E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 SUPERFAMILY SSF53335 746 833 2.11E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 SUPERFAMILY SSF52540 306 465 4.15E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 SUPERFAMILY SSF52540 146 209 4.15E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 SUPERFAMILY SSF52540 19 209 3.28E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 Gene3D G3DSA:3.40.50.150 493 676 2.2E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 Gene3D G3DSA:3.40.50.150 728 837 2.2E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11600 cc4e67bcfcae578eee57afb2a5945dd4 854 Pfam PF01555 DNA methylase 512 824 1.5E-9 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RPIC_RS00640 72d52a0f179d5c5c4ee657654ed7cb19 281 Gene3D G3DSA:3.40.50.1980 19 135 2.0E-20 T 22-04-2016 RPIC_RS00640 72d52a0f179d5c5c4ee657654ed7cb19 281 Gene3D G3DSA:3.40.50.1980 150 275 6.0E-10 T 22-04-2016 RPIC_RS00640 72d52a0f179d5c5c4ee657654ed7cb19 281 PANTHER PTHR30535 1 179 1.1E-24 T 22-04-2016 RPIC_RS00640 72d52a0f179d5c5c4ee657654ed7cb19 281 Pfam PF01497 Periplasmic binding protein 20 179 4.8E-11 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RPIC_RS00640 72d52a0f179d5c5c4ee657654ed7cb19 281 SUPERFAMILY SSF53807 19 275 5.89E-35 T 22-04-2016 RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 PANTHER PTHR24031 1 170 3.8E-80 T 22-04-2016 RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 SUPERFAMILY SSF52540 3 169 8.09E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 Gene3D G3DSA:3.40.50.300 2 101 1.8E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 43 51 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 Gene3D G3DSA:3.40.50.300 102 170 1.8E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 Pfam PF00270 DEAD/DEAH box helicase 4 86 1.7E-22 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS20675 f7dc0a7d7dcf78ad7aa25bfbf85d7520 170 PANTHER PTHR24031:SF0 1 170 3.8E-80 T 22-04-2016 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 PANTHER PTHR22960 27 323 6.6E-112 T 22-04-2016 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 35 373 9.5E-117 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 Pfam PF13353 4Fe-4S single cluster domain 51 163 3.0E-9 T 22-04-2016 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 35 373 41.237 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 Gene3D G3DSA:3.20.20.70 35 341 8.9E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 SMART SM00729 44 258 1.4E-8 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 Pfam PF04055 Radical SAM superfamily 48 217 3.2E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 SUPERFAMILY SSF102114 35 342 1.96E-76 T 22-04-2016 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 50 61 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04445 cabb12ce5e426b6c60f8e639e73b706c 373 Pfam PF06463 Molybdenum Cofactor Synthesis C 225 351 1.0E-37 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS04895 a447cb454559a6463d69d6df69022c98 409 Pfam PF08007 Cupin superfamily protein 31 340 2.1E-94 T 22-04-2016 IPR003347 JmjC domain RPIC_RS04895 a447cb454559a6463d69d6df69022c98 409 SMART SM00558 109 247 7.7E-4 T 22-04-2016 IPR003347 JmjC domain RPIC_RS04895 a447cb454559a6463d69d6df69022c98 409 PANTHER PTHR13096:SF5 29 252 5.2E-35 T 22-04-2016 RPIC_RS04895 a447cb454559a6463d69d6df69022c98 409 SUPERFAMILY SSF51197 22 314 4.26E-71 T 22-04-2016 RPIC_RS04895 a447cb454559a6463d69d6df69022c98 409 PANTHER PTHR13096 29 252 5.2E-35 T 22-04-2016 RPIC_RS04895 a447cb454559a6463d69d6df69022c98 409 Gene3D G3DSA:2.60.120.650 22 233 3.8E-40 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.30.420.40 10 164 9.5E-46 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 SUPERFAMILY SSF53067 9 153 4.99E-38 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PANTHER PTHR19375:SF117 9 332 4.6E-179 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 4.8E-157 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 1.9E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 PANTHER PTHR19375 9 332 4.6E-179 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 Pfam PF06723 MreB/Mbl protein 10 340 2.1E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 SUPERFAMILY SSF53067 154 339 2.41E-48 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.30.420.40 268 322 8.5E-33 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.30.420.40 165 191 8.5E-33 T 22-04-2016 RPIC_RS18305 de56662300948ce09f1dfc51865d7969 347 Gene3D G3DSA:3.90.640.10 192 264 3.1E-30 T 22-04-2016 RPIC_RS08775 6e50b818df3cc37bf71e6ccd7a5b2d1c 218 Pfam PF03243 Alkylmercury lyase 88 180 5.3E-11 T 22-04-2016 IPR004927 Alkylmercury lyase GO:0018836|GO:0046413 RPIC_RS08775 6e50b818df3cc37bf71e6ccd7a5b2d1c 218 SUPERFAMILY SSF160387 93 215 4.18E-26 T 22-04-2016 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PANTHER PTHR23115 1 395 2.3E-264 T 22-04-2016 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 4.2E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 7.4E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 SUPERFAMILY SSF50447 207 303 1.47E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.76E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.76E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.76E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.76E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.76E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.6E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Gene3D G3DSA:3.40.50.300 4 213 4.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Gene3D G3DSA:2.40.30.10 214 300 1.2E-36 T 22-04-2016 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Gene3D G3DSA:2.40.30.10 302 395 2.3E-46 T 22-04-2016 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.274 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 PANTHER PTHR23115:SF151 1 395 2.3E-264 T 22-04-2016 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 8.2E-59 T 22-04-2016 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 2.3E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 SUPERFAMILY SSF52540 6 221 2.17E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16405 f23bee75e54938314ec7a271dd16d74f 396 SUPERFAMILY SSF50465 304 396 3.6E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 Gene3D G3DSA:3.20.140.10 1 372 1.9E-144 T 22-04-2016 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 387 2.1E-143 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 SUPERFAMILY SSF54675 1 137 2.59E-43 T 22-04-2016 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 SUPERFAMILY SSF51690 118 388 3.34E-90 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 PIRSF PIRSF000484 1 379 1.4E-66 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 163 388 3.1E-71 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 PANTHER PTHR11098:SF16 2 389 7.1E-177 T 22-04-2016 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 PANTHER PTHR11098 2 389 7.1E-177 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC_RS04405 6ef63b6565df7ad0a4fe8991bfc72d60 389 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 389 44.536 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Gene3D G3DSA:1.10.150.120 88 175 6.0E-35 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Gene3D G3DSA:3.10.20.30 2 87 4.7E-26 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 SUPERFAMILY SSF47741 98 197 3.4E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 PANTHER PTHR11908:SF66 2 504 1.9E-118 T 22-04-2016 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Pfam PF01799 [2Fe-2S] binding domain 86 162 1.1E-28 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 SUPERFAMILY SSF56176 201 369 1.39E-48 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 PANTHER PTHR11908 2 504 1.9E-118 T 22-04-2016 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Gene3D G3DSA:3.30.465.10 257 369 2.7E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 61 1.7E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 PIRSF PIRSF036557 3 493 4.3E-234 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Gene3D G3DSA:3.30.390.50 380 480 1.2E-37 T 22-04-2016 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 205 369 6.4E-47 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 SUPERFAMILY SSF55447 377 483 2.35E-35 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 SMART SM01092 379 480 3.7E-32 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 379 479 3.2E-31 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 6 480 5.8E-212 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 SUPERFAMILY SSF54292 5 90 6.79E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS11050 2655eef7075501d8a837b595ffb112c9 504 Gene3D G3DSA:3.30.43.10 207 256 6.0E-24 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS04210 e3ff29c617ce01c333048c988769203d 243 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 18 76 7.4E-11 T 22-04-2016 IPR029095 NarX-like, N-terminal RPIC_RS04210 e3ff29c617ce01c333048c988769203d 243 SUPERFAMILY SSF58104 126 213 2.01E-10 T 22-04-2016 RPIC_RS04210 e3ff29c617ce01c333048c988769203d 243 Gene3D G3DSA:1.10.287.950 108 196 2.4E-10 T 22-04-2016 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 PANTHER PTHR11808:SF12 5 236 1.4E-209 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 PANTHER PTHR11808:SF12 266 427 1.4E-209 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 Gene3D G3DSA:3.90.1150.10 289 425 5.2E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 SUPERFAMILY SSF53383 5 423 6.4E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 423 4.1E-132 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 PANTHER PTHR11808 5 236 1.4E-209 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 PANTHER PTHR11808 266 427 1.4E-209 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 3.1E-170 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 Gene3D G3DSA:3.40.640.10 5 287 1.1E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS09795 37cbe8f434653f57266f9804ec11bacf 444 PIRSF PIRSF001434 1 426 4.6E-131 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 Gene3D G3DSA:3.40.50.2300 3 100 1.2E-7 T 22-04-2016 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 SUPERFAMILY SSF52794 3 102 3.92E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 Gene3D G3DSA:3.40.50.2300 109 210 4.2E-40 T 22-04-2016 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 PANTHER PTHR30505:SF0 13 542 1.9E-226 T 22-04-2016 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 PANTHER PTHR30505 13 542 1.9E-226 T 22-04-2016 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 226 564 3.6E-136 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 114 196 2.2E-33 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 SUPERFAMILY SSF52794 112 211 6.28E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RPIC_RS15330 15b4c6248b7323cca78d65e4ef6dab36 571 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 115 203 1.9E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Gene3D G3DSA:3.40.50.980 196 342 7.9E-28 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Pfam PF00501 AMP-binding enzyme 26 443 4.1E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 SUPERFAMILY SSF56801 12 537 5.89E-138 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 1.0E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 PANTHER PTHR24095 9 537 1.3E-256 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Gene3D G3DSA:3.40.50.980 20 132 2.0E-31 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Gene3D G3DSA:3.40.50.980 171 195 2.0E-31 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Gene3D G3DSA:2.30.38.10 367 437 3.8E-20 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 Gene3D G3DSA:3.30.300.30 438 535 1.2E-30 T 22-04-2016 RPIC_RS00105 a2e9145bd6c30425eb9dd31e4885dfca 544 PANTHER PTHR24095:SF169 9 537 1.3E-256 T 22-04-2016 RPIC_RS03530 6cb8447df75c1d60a88a067a967c7774 765 Pfam PF05170 AsmA family 1 603 3.3E-109 T 22-04-2016 IPR007844 AsmA RPIC_RS03530 6cb8447df75c1d60a88a067a967c7774 765 PANTHER PTHR30441:SF2 6 729 7.3E-100 T 22-04-2016 RPIC_RS03530 6cb8447df75c1d60a88a067a967c7774 765 PANTHER PTHR30441 6 729 7.3E-100 T 22-04-2016 RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 SUPERFAMILY SSF50939 309 389 4.49E-56 T 22-04-2016 IPR011040 Sialidases RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 SUPERFAMILY SSF50939 31 272 4.49E-56 T 22-04-2016 IPR011040 Sialidases RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 Gene3D G3DSA:2.120.10.10 31 276 2.4E-68 T 22-04-2016 IPR011040 Sialidases RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 Gene3D G3DSA:2.120.10.10 311 389 2.4E-68 T 22-04-2016 IPR011040 Sialidases RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 Pfam PF13088 BNR repeat-like domain 47 370 5.2E-72 T 22-04-2016 IPR011040 Sialidases RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 PANTHER PTHR33307:SF3 31 287 3.5E-80 T 22-04-2016 RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 PANTHER PTHR33307:SF3 336 387 3.5E-80 T 22-04-2016 RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 PANTHER PTHR33307 31 287 3.5E-80 T 22-04-2016 RPIC_RS02740 f6b7994275c14886e3fa5f7e493b3745 391 PANTHER PTHR33307 336 387 3.5E-80 T 22-04-2016 RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 SUPERFAMILY SSF56300 8 254 1.67E-49 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 Gene3D G3DSA:3.60.21.10 8 135 2.7E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 Gene3D G3DSA:3.60.21.10 169 272 2.7E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 Pfam PF00149 Calcineurin-like phosphoesterase 9 147 1.3E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 8 254 8.5E-70 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 PIRSF PIRSF000903 4 277 3.1E-99 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 PANTHER PTHR24032 9 256 3.9E-84 T 22-04-2016 RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 PANTHER PTHR24032:SF27 9 256 3.9E-84 T 22-04-2016 RPIC_RS03045 52a2204e23fa0318f8fb7a51017d46f8 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 4 269 43.449 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 RPIC_RS13390 4e159eaeb3280453089bf25231659da6 396 PANTHER PTHR11351 17 382 4.1E-140 T 22-04-2016 RPIC_RS13390 4e159eaeb3280453089bf25231659da6 396 Pfam PF00487 Fatty acid desaturase 18 240 8.0E-14 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 RPIC_RS13390 4e159eaeb3280453089bf25231659da6 396 Pfam PF01610 Transposase 273 395 5.1E-8 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RPIC_RS13390 4e159eaeb3280453089bf25231659da6 396 PANTHER PTHR11351:SF33 17 382 4.1E-140 T 22-04-2016 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 183 2.5E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 SMART SM00387 28 185 2.5E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 26 35 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 94 111 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 173 190 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 121 143 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 27 49 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 6 26 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 76 93 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PRINTS PR00775 90kDa heat shock protein signature 191 209 1.6E-62 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 SUPERFAMILY SSF110942 520 639 2.22E-34 T 22-04-2016 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 SUPERFAMILY SSF54211 236 494 6.9E-94 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 Gene3D G3DSA:3.30.565.10 6 242 4.9E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 Pfam PF00183 Hsp90 protein 217 639 1.0E-126 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PANTHER PTHR11528 1 639 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 SUPERFAMILY SSF55874 5 217 6.94E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PIRSF PIRSF002583 1 640 2.3E-210 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 PANTHER PTHR11528:SF44 1 639 0.0 T 22-04-2016 RPIC_RS04180 b3166ccd8a5cc511f4fb2e875d92c512 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 3 640 32.621 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 PANTHER PTHR30136:SF14 21 253 3.3E-57 T 22-04-2016 RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 Gene3D G3DSA:1.10.10.10 18 84 8.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 PANTHER PTHR30136 21 253 3.3E-57 T 22-04-2016 RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 SMART SM00346 17 105 7.0E-5 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 Pfam PF09339 IclR helix-turn-helix domain 21 66 3.4E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 Gene3D G3DSA:3.30.450.40 86 247 8.8E-42 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 SUPERFAMILY SSF55781 89 253 7.85E-35 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 SUPERFAMILY SSF46785 21 84 7.86E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13785 082fe2f3f399c91602e2550fccce3a40 256 Pfam PF01614 Bacterial transcriptional regulator 134 251 4.0E-15 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC_RS10090 f3a516edf6f45c608ffab9dd263ac026 420 SUPERFAMILY SSF53300 249 388 3.34E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS10090 f3a516edf6f45c608ffab9dd263ac026 420 Pfam PF04285 Protein of unknown function (DUF444) 4 417 1.9E-175 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 RPIC_RS10090 f3a516edf6f45c608ffab9dd263ac026 420 PANTHER PTHR30510 1 418 2.3E-149 T 22-04-2016 RPIC_RS10090 f3a516edf6f45c608ffab9dd263ac026 420 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 420 36.717 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 SUPERFAMILY SSF53137 18 133 2.35E-47 T 22-04-2016 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 Gene3D G3DSA:3.30.420.80 10 133 3.6E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 2.0E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 133 32.922 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 PANTHER PTHR11759 15 133 1.4E-69 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 PIRSF PIRSF002131 1 133 3.0E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16160 1efcea213eda9565a48e67a85a0c23a4 133 Pfam PF00411 Ribosomal protein S11 23 132 3.8E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.9E-38 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 PANTHER PTHR10072:SF48 1 106 4.1E-51 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 SUPERFAMILY SSF89360 1 95 4.71E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 7.3E-24 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 Gene3D G3DSA:2.60.300.12 1 95 4.6E-36 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 87 104 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 PANTHER PTHR10072 1 106 4.1E-51 T 22-04-2016 RPIC_RS04355 f9139aa9ee3de24b53b935904a6d8c56 106 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 2 106 1.5E-52 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SMART SM00387 389 503 2.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 480 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 455 3.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SUPERFAMILY SSF55874 332 501 7.99E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SUPERFAMILY SSF52172 1 149 2.42E-23 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 390 502 4.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 338 3.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Gene3D G3DSA:3.30.450.20 129 253 3.8E-23 T 22-04-2016 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SUPERFAMILY SSF47384 261 344 2.16E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SUPERFAMILY SSF52172 523 641 4.84E-32 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Pfam PF00072 Response regulator receiver domain 527 633 2.0E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Pfam PF00072 Response regulator receiver domain 7 108 1.6E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Pfam PF13426 PAS domain 155 256 2.8E-12 T 22-04-2016 IPR000014 PAS domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SMART SM00091 141 210 9.7E-6 T 22-04-2016 IPR000014 PAS domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Gene3D G3DSA:3.30.565.10 345 507 4.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SMART SM00388 277 343 2.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 261 6.5E-15 T 22-04-2016 IPR000014 PAS domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SMART SM00448 525 635 5.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SMART SM00448 4 120 5.9E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Gene3D G3DSA:1.10.287.130 269 337 1.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 SUPERFAMILY SSF55785 128 253 1.47E-21 T 22-04-2016 IPR000014 PAS domain RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Gene3D G3DSA:3.40.50.2300 516 641 1.3E-29 T 22-04-2016 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 PANTHER PTHR24423 125 645 3.7E-126 T 22-04-2016 RPIC_RS15515 d1cd0309851d6f57f5052a1bb3780c5c 652 Gene3D G3DSA:3.40.50.2300 3 128 4.8E-21 T 22-04-2016 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624:SF67 369 464 0.0 T 22-04-2016 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624:SF67 560 776 0.0 T 22-04-2016 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624:SF67 795 878 0.0 T 22-04-2016 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624:SF67 82 301 0.0 T 22-04-2016 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624:SF67 492 542 0.0 T 22-04-2016 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624 369 464 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624 560 776 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624 795 878 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624 82 301 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PANTHER PTHR11624 492 542 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 PIRSF PIRSF000156 5 896 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 SUPERFAMILY SSF52518 65 473 1.45E-136 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 SUPERFAMILY SSF52922 708 895 8.11E-57 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 91 303 4.6E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 Gene3D G3DSA:3.40.50.970 478 711 3.1E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 Gene3D G3DSA:3.40.50.970 65 473 6.6E-154 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 Gene3D G3DSA:3.40.50.920 714 895 9.9E-74 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 SUPERFAMILY SSF52518 479 706 8.24E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS09565 05cafb2ca91a897f46cec24751e9a86e 896 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 14 895 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 SUPERFAMILY SSF52540 21 258 4.22E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 20 262 6.8E-117 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 236 257 3.6E-5 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 Pfam PF00005 ABC transporter 36 187 7.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 PANTHER PTHR24220 22 259 9.4E-134 T 22-04-2016 RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 Gene3D G3DSA:3.40.50.300 19 255 2.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 SMART SM00382 45 252 8.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01290 4a4ce954c446102595144790e6f086f1 262 PANTHER PTHR24220:SF497 22 259 9.4E-134 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 218 801 5.2E-182 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 262 770 2.2E-86 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SUPERFAMILY SSF56784 491 511 2.38E-54 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SUPERFAMILY SSF56784 550 799 2.38E-54 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 495 501 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SUPERFAMILY SSF81653 294 391 7.98E-25 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Pfam PF04945 YHS domain 50 93 4.9E-14 T 22-04-2016 IPR007029 YHS domain RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SMART SM00746 51 88 4.6E-7 T 22-04-2016 IPR011017 TRASH domain RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PANTHER PTHR24093:SF332 147 802 1.7E-212 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PANTHER PTHR24093:SF332 46 125 1.7E-212 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 199 802 1.0E-174 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Gene3D G3DSA:3.40.50.1000 464 509 3.4E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Gene3D G3DSA:3.40.50.1000 620 761 3.4E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SUPERFAMILY SSF81665 392 487 8.24E-12 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SUPERFAMILY SSF81665 741 760 8.24E-12 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 SUPERFAMILY SSF81665 259 294 8.24E-12 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PANTHER PTHR24093 147 802 1.7E-212 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PANTHER PTHR24093 46 125 1.7E-212 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Gene3D G3DSA:2.70.150.10 241 391 4.5E-28 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 2.0E-28 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 507 2.0E-28 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 628 2.0E-28 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 715 727 2.0E-28 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 649 2.0E-28 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 692 711 2.0E-28 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00943 Copper-transporting ATPase signature 280 298 5.78E-11 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00943 Copper-transporting ATPase signature 476 491 5.78E-11 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00943 Copper-transporting ATPase signature 669 686 5.78E-11 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00943 Copper-transporting ATPase signature 203 222 5.78E-11 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 PRINTS PR00943 Copper-transporting ATPase signature 414 428 5.78E-11 T 22-04-2016 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Gene3D G3DSA:3.40.1110.10 510 619 1.3E-17 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Pfam PF00122 E1-E2 ATPase 261 484 3.7E-66 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08850 c721a2462d42c060585f2ce16d66de72 806 Pfam PF00702 haloacid dehalogenase-like hydrolase 489 706 5.7E-40 T 22-04-2016 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 PANTHER PTHR11780 20 428 8.0E-216 T 22-04-2016 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 420 3.1E-193 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 SMART SM00928 334 379 2.7E-24 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 SUPERFAMILY SSF142984 246 329 7.32E-26 T 22-04-2016 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 SUPERFAMILY SSF142019 18 244 2.88E-82 T 22-04-2016 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 338 419 9.1E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 Pfam PF10531 SLBB domain 248 296 2.4E-13 T 22-04-2016 IPR019554 Soluble ligand binding domain RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 SUPERFAMILY SSF140490 331 428 4.84E-37 T 22-04-2016 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 PANTHER PTHR11780:SF10 20 428 8.0E-216 T 22-04-2016 RPIC_RS10860 c2f44b7c24222bc64b4e2b3017e31d8b 431 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 8.0E-46 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 SUPERFAMILY SSF53720 10 425 4.32E-115 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 9 425 40.761 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 PANTHER PTHR11063:SF8 5 425 2.2E-170 T 22-04-2016 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 332 354 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 Pfam PF00171 Aldehyde dehydrogenase family 318 382 1.5E-7 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 Pfam PF00171 Aldehyde dehydrogenase family 15 280 1.0E-15 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 PANTHER PTHR11063 5 425 2.2E-170 T 22-04-2016 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 PIRSF PIRSF000151 2 426 1.1E-168 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 Gene3D G3DSA:3.40.309.10 230 383 2.5E-40 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 415 1.3E-143 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 Gene3D G3DSA:3.40.605.10 4 228 2.9E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS14675 d10d7792d60fc6ac073ac79f490cbb9b 426 Gene3D G3DSA:3.40.605.10 384 425 2.9E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS03715 8e143c3665d9fee1c99fda5bc4f2709d 210 Pfam PF01810 LysE type translocator 17 206 3.8E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS03715 8e143c3665d9fee1c99fda5bc4f2709d 210 PIRSF PIRSF006324 1 209 1.5E-47 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS03715 8e143c3665d9fee1c99fda5bc4f2709d 210 PANTHER PTHR30086 2 210 1.7E-99 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS03715 8e143c3665d9fee1c99fda5bc4f2709d 210 PANTHER PTHR30086:SF7 2 210 1.7E-99 T 22-04-2016 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Gene3D G3DSA:1.10.10.10 758 827 7.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 590 826 1.6E-118 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 618 631 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PANTHER PTHR30603:SF0 541 827 4.0E-221 T 22-04-2016 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PANTHER PTHR30603:SF0 205 361 4.0E-221 T 22-04-2016 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Pfam PF04545 Sigma-70, region 4 762 815 3.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 SUPERFAMILY SSF88946 324 661 8.37E-101 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Pfam PF04539 Sigma-70 region 3 673 749 3.0E-25 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PANTHER PTHR30603 541 827 4.0E-221 T 22-04-2016 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PANTHER PTHR30603 205 361 4.0E-221 T 22-04-2016 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 590 815 1.9E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PRINTS PR00046 Major sigma-70 factor signature 642 650 1.2E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PRINTS PR00046 Major sigma-70 factor signature 618 631 1.2E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PRINTS PR00046 Major sigma-70 factor signature 787 802 1.2E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PRINTS PR00046 Major sigma-70 factor signature 802 813 1.2E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 PRINTS PR00046 Major sigma-70 factor signature 766 778 1.2E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 SUPERFAMILY SSF88659 667 740 1.6E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Pfam PF04546 Sigma-70, non-essential region 348 563 2.0E-66 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Pfam PF03979 Sigma-70 factor, region 1.1 211 290 7.7E-27 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 SUPERFAMILY SSF88659 724 825 4.49E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Gene3D G3DSA:1.10.601.10 321 663 4.0E-129 T 22-04-2016 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 188 827 42.475 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Gene3D G3DSA:1.10.10.10 667 718 6.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 787 813 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Pfam PF04542 Sigma-70 region 2 596 663 9.6E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS11930 5946ac38513b4968488c93ea5639f4a8 829 Pfam PF00140 Sigma-70 factor, region 1.2 307 339 9.1E-13 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 SUPERFAMILY SSF56349 129 387 4.41E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 SUPERFAMILY SSF56349 51 102 4.41E-33 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 Gene3D G3DSA:1.10.443.10 191 387 2.3E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 Gene3D G3DSA:1.10.150.130 60 161 1.2E-8 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 Pfam PF00589 Phage integrase family 203 380 1.7E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 PANTHER PTHR30349 60 103 2.6E-30 T 22-04-2016 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 PANTHER PTHR30349 338 387 2.6E-30 T 22-04-2016 RPIC_RS08505 148a141d6fcf19d4a477689e36b20703 397 PANTHER PTHR30349 130 322 2.6E-30 T 22-04-2016 RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 Gene3D G3DSA:1.10.10.10 1 83 7.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 Gene3D G3DSA:3.40.190.10 179 261 3.8E-14 T 22-04-2016 RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 SUPERFAMILY SSF53850 89 296 1.99E-34 T 22-04-2016 RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 Pfam PF03466 LysR substrate binding domain 87 293 2.3E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 SUPERFAMILY SSF46785 1 83 2.04E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 PANTHER PTHR30537 1 293 4.1E-82 T 22-04-2016 RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 Gene3D G3DSA:3.40.190.10 91 178 1.2E-13 T 22-04-2016 RPIC_RS13600 75d772ac7a67f814958596763a86233f 302 PANTHER PTHR30537:SF5 1 293 4.1E-82 T 22-04-2016 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 Gene3D G3DSA:1.25.40.20 73 132 1.8E-15 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 SMART SM00248 134 163 0.4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 SMART SM00248 101 130 0.3 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 SMART SM00248 200 234 2.8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 SMART SM00248 68 97 3400.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 SMART SM00248 167 196 0.21 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 SUPERFAMILY SSF48403 70 260 9.24E-45 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 PANTHER PTHR24198 65 260 3.7E-43 T 22-04-2016 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 PRINTS PR01415 Ankyrin repeat signature 221 235 1.8E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 PRINTS PR01415 Ankyrin repeat signature 168 183 1.8E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 Pfam PF12796 Ankyrin repeats (3 copies) 73 132 9.6E-7 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 Pfam PF12796 Ankyrin repeats (3 copies) 141 236 1.0E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS03565 7237c4e906f1420e64d9427dc0b2722a 264 Gene3D G3DSA:1.25.40.20 133 258 6.7E-33 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS04425 9327c29873fd36815668a04733c251b4 490 SUPERFAMILY SSF58113 30 188 6.28E-9 T 22-04-2016 RPIC_RS04425 9327c29873fd36815668a04733c251b4 490 Pfam PF02646 RmuC family 180 471 2.8E-82 T 22-04-2016 IPR003798 DNA recombination RmuC RPIC_RS04425 9327c29873fd36815668a04733c251b4 490 PANTHER PTHR30563 1 475 1.6E-92 T 22-04-2016 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PANTHER PTHR11985 12 505 5.3E-167 T 22-04-2016 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 Pfam PF01266 FAD dependent oxidoreductase 12 331 1.3E-52 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 501 3.2E-12 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 SUPERFAMILY SSF51905 10 304 4.66E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 Gene3D G3DSA:3.50.50.60 9 251 1.5E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 321 327 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 1.7E-26 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 PANTHER PTHR11985:SF1 12 505 5.3E-167 T 22-04-2016 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS16475 02fb30a80378d80d577b301e584910d2 525 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 Gene3D G3DSA:3.40.190.10 34 110 1.6E-44 T 22-04-2016 RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 Gene3D G3DSA:3.40.190.10 213 251 1.6E-44 T 22-04-2016 RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 SMART SM00062 34 252 1.6E-75 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 250 1.4E-69 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 Gene3D G3DSA:3.40.190.10 111 212 2.6E-30 T 22-04-2016 RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 PANTHER PTHR18966 32 250 2.1E-50 T 22-04-2016 RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 SUPERFAMILY SSF53850 12 251 1.17E-75 T 22-04-2016 RPIC_RS13780 e859f365e1c6432524cfd8c300e49dd6 254 SMART SM00079 34 251 2.0E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 PANTHER PTHR11059 2 557 4.5E-152 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 SUPERFAMILY SSF52540 1 216 3.87E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 Gene3D G3DSA:3.40.50.300 1 205 4.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 PIRSF PIRSF003128 1 553 5.8E-157 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 548 4.8E-149 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 504 6.4E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 Gene3D G3DSA:3.40.50.300 339 350 3.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 Gene3D G3DSA:3.40.50.300 427 507 3.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 SUPERFAMILY SSF52540 287 504 5.04E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14230 54c244719bc69428f4840ee5e77b131d 568 SUPERFAMILY SSF52540 3 50 5.04E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13815 bb91da6e1bba6c8a6651a5b06c456f84 206 PANTHER PTHR30625 1 201 2.5E-40 T 22-04-2016 RPIC_RS13815 bb91da6e1bba6c8a6651a5b06c456f84 206 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 190 1.0E-31 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RPIC_RS16090 7e6405fd4f55aa0a10bb8460194ee302 331 PANTHER PTHR19372:SF1 14 326 7.8E-134 T 22-04-2016 RPIC_RS16090 7e6405fd4f55aa0a10bb8460194ee302 331 Gene3D G3DSA:3.90.420.10 72 315 6.9E-69 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC_RS16090 7e6405fd4f55aa0a10bb8460194ee302 331 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 10 331 58.7 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 RPIC_RS16090 7e6405fd4f55aa0a10bb8460194ee302 331 PANTHER PTHR19372 14 326 7.8E-134 T 22-04-2016 RPIC_RS16090 7e6405fd4f55aa0a10bb8460194ee302 331 Pfam PF00174 Oxidoreductase molybdopterin binding domain 106 261 2.6E-29 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC_RS16090 7e6405fd4f55aa0a10bb8460194ee302 331 SUPERFAMILY SSF56524 72 327 1.44E-87 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 Gene3D G3DSA:3.40.50.970 372 573 2.6E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 183 2.3E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 PANTHER PTHR18968 1 580 0.0 T 22-04-2016 RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 SUPERFAMILY SSF52467 202 375 7.74E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 Gene3D G3DSA:3.40.50.1220 203 371 1.4E-65 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 SUPERFAMILY SSF52518 386 580 2.75E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 344 1.8E-46 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 Gene3D G3DSA:3.40.50.970 18 195 7.6E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 408 556 6.0E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 SUPERFAMILY SSF52518 16 198 8.16E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 PANTHER PTHR18968:SF116 1 580 0.0 T 22-04-2016 RPIC_RS10960 f032204138ee0b92b628bfcbcebd00e0 585 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 19 579 4.8E-255 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 SMART SM00382 34 217 1.5E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 SUPERFAMILY SSF52540 6 234 1.85E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 PANTHER PTHR24220 7 260 1.8E-116 T 22-04-2016 RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 Gene3D G3DSA:3.40.50.300 3 222 9.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 Pfam PF00005 ABC transporter 25 167 4.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 255 6.6E-104 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 RPIC_RS01140 ad3e621e53f851ba8c0cd1a89076dc10 267 PANTHER PTHR24220:SF361 7 260 1.8E-116 T 22-04-2016 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Gene3D G3DSA:3.90.190.20 398 532 3.5E-47 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Gene3D G3DSA:3.40.1190.10 335 396 4.3E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Gene3D G3DSA:3.40.1190.10 146 303 4.3E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 SUPERFAMILY SSF51984 53 135 1.73E-13 T 22-04-2016 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 PANTHER PTHR23135 44 539 1.0E-133 T 22-04-2016 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Pfam PF08245 Mur ligase middle domain 171 377 3.6E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 52 535 33.375 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Pfam PF02875 Mur ligase family, glutamate ligase domain 398 466 3.9E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 54 532 3.0E-114 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 PANTHER PTHR23135:SF2 44 539 1.0E-133 T 22-04-2016 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 Gene3D G3DSA:3.40.50.720 54 145 2.5E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 SUPERFAMILY SSF53623 337 394 1.27E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 SUPERFAMILY SSF53623 166 305 1.27E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15235 0642b72818c1467eb4a3f2a668e17b74 543 SUPERFAMILY SSF53244 396 535 1.49E-41 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 PANTHER PTHR21272 9 151 2.6E-87 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 SUPERFAMILY SSF52304 12 153 3.01E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 155 72.442 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 ProSitePatterns PS01029 Dehydroquinase class II signature. 16 33 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 13 152 8.9E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 PIRSF PIRSF001399 9 154 4.4E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 Gene3D G3DSA:3.40.50.9100 11 151 4.7E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 Pfam PF01220 Dehydroquinase class II 13 149 1.1E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS14920 e66046bd967a8e3a6ea1513795ac5a3b 155 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 13 152 2.0E-70 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 SMART SM00841 129 187 5.4E-23 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.5E-17 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 PANTHER PTHR30053 3 189 1.7E-65 T 22-04-2016 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Gene3D G3DSA:2.30.30.30 4 63 7.2E-18 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Pfam PF09285 Elongation factor P, C-terminal 129 187 6.6E-21 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 SMART SM01185 67 121 4.0E-25 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Gene3D G3DSA:2.40.50.140 128 188 2.6E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 188 3.8E-62 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 PIRSF PIRSF005901 2 189 1.3E-52 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Hamap MF_00141 Elongation factor P [efp]. 1 188 44.564 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 1.1E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 SUPERFAMILY SSF50249 65 127 6.0E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 SUPERFAMILY SSF50249 128 188 1.88E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 SUPERFAMILY SSF50104 4 63 4.99E-15 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC_RS04595 3d209cbf74c5435106a3dd2b6f57ac9f 189 Gene3D G3DSA:2.40.50.140 65 127 1.4E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.30.365.10 169 271 1.5E-39 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 127 4.4E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 PANTHER PTHR11908:SF71 4 732 3.8E-280 T 22-04-2016 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 SMART SM01008 18 130 1.6E-37 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.30.365.10 439 601 3.3E-29 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 SUPERFAMILY SSF54665 3 141 1.03E-36 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 PANTHER PTHR11908 4 732 3.8E-280 T 22-04-2016 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.30.365.10 117 168 3.0E-8 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.30.365.10 276 302 3.0E-8 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.90.1170.50 3 116 4.4E-34 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 SUPERFAMILY SSF56003 144 731 1.03E-166 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 153 675 2.7E-122 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.30.365.10 349 438 2.0E-54 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS16715 c080a291b6136893402bcf565ede026a 732 Gene3D G3DSA:3.30.365.10 602 731 2.0E-54 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Gene3D G3DSA:3.30.1360.120 3 54 1.8E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Gene3D G3DSA:3.30.1360.120 155 246 1.8E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 PANTHER PTHR13847 6 367 2.4E-57 T 22-04-2016 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 364 1.5E-14 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Gene3D G3DSA:2.40.30.110 290 371 3.6E-25 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 269 7.6E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Hamap MF_00259 Aminomethyltransferase [gcvT]. 2 369 43.983 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 SUPERFAMILY SSF103025 3 285 4.04E-89 T 22-04-2016 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 PANTHER PTHR13847:SF5 6 367 2.4E-57 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 Gene3D G3DSA:3.30.70.1400 55 139 4.3E-29 T 22-04-2016 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 369 3.8E-114 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 SUPERFAMILY SSF101790 285 371 1.96E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RPIC_RS17280 ee5422fa7581ccdeee8c81c6dd8b28bb 375 PIRSF PIRSF006487 1 373 2.6E-77 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 431 6.1E-92 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 Gene3D G3DSA:3.10.105.10 284 485 6.1E-57 T 22-04-2016 RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 PANTHER PTHR30290 13 516 8.8E-238 T 22-04-2016 RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 SUPERFAMILY SSF53850 34 515 5.19E-140 T 22-04-2016 RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 Gene3D G3DSA:3.40.190.10 135 283 4.8E-48 T 22-04-2016 RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 PIRSF PIRSF002741 25 517 2.3E-106 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC_RS06225 157762e08b19c3b5738c2b65b94033db 517 PANTHER PTHR30290:SF32 13 516 8.8E-238 T 22-04-2016 RPIC_RS02920 d352d26fe933180fd8e81883c41978a8 338 SUPERFAMILY SSF53448 10 258 5.71E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS02920 d352d26fe933180fd8e81883c41978a8 338 PANTHER PTHR10859:SF81 1 338 1.1E-144 T 22-04-2016 RPIC_RS02920 d352d26fe933180fd8e81883c41978a8 338 Gene3D G3DSA:3.90.550.10 8 149 6.6E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS02920 d352d26fe933180fd8e81883c41978a8 338 PANTHER PTHR10859 1 338 1.1E-144 T 22-04-2016 RPIC_RS02920 d352d26fe933180fd8e81883c41978a8 338 Pfam PF00535 Glycosyl transferase family 2 12 173 1.2E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PANTHER PTHR11946:SF7 253 590 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PANTHER PTHR11946:SF7 635 877 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PANTHER PTHR11946:SF7 1 212 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 SUPERFAMILY SSF47323 679 876 3.18E-33 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Gene3D G3DSA:3.90.740.10 315 431 1.6E-42 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Gene3D G3DSA:3.90.740.10 231 281 1.6E-42 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 191 204 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 573 583 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 220 239 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 159 175 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 133 150 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 540 562 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PRINTS PR00985 Leucyl-tRNA synthetase signature 503 521 3.8E-49 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Pfam PF08264 Anticodon-binding domain of tRNA 717 839 2.8E-14 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Pfam PF09334 tRNA synthetases class I (M) 44 177 3.4E-18 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PANTHER PTHR11946 253 590 0.0 T 22-04-2016 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PANTHER PTHR11946 635 877 0.0 T 22-04-2016 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 PANTHER PTHR11946 1 212 0.0 T 22-04-2016 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Gene3D G3DSA:3.40.50.620 433 589 5.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Gene3D G3DSA:3.40.50.620 4 230 5.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Gene3D G3DSA:3.40.50.620 635 664 5.0E-148 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 433 589 2.5E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 635 675 2.5E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 876 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 877 22.845 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 SUPERFAMILY SSF50677 231 430 1.31E-51 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Gene3D G3DSA:1.10.730.10 665 813 2.1E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 SUPERFAMILY SSF52374 432 684 7.09E-147 T 22-04-2016 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 SUPERFAMILY SSF52374 4 231 7.09E-147 T 22-04-2016 RPIC_RS14690 0be65eaa9bbefcf1ae4a87ecfefd0a3c 877 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 418 1.2E-67 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Pfam PF04679 ATP dependent DNA ligase C terminal region 434 529 5.5E-27 T 22-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Pfam PF01068 ATP dependent DNA ligase domain 242 415 4.3E-27 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 PANTHER PTHR10459:SF70 224 696 6.2E-80 T 22-04-2016 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Gene3D G3DSA:3.30.470.30 253 362 1.3E-30 T 22-04-2016 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 5 167 1.5E-71 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 570 816 1.6E-88 T 22-04-2016 IPR014145 DNA ligase D, polymerase domain RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Gene3D G3DSA:3.30.1490.70 373 416 9.2E-18 T 22-04-2016 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Gene3D G3DSA:3.30.1490.70 224 252 9.2E-18 T 22-04-2016 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 SUPERFAMILY SSF56091 214 416 8.43E-48 T 22-04-2016 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 SUPERFAMILY SSF50249 418 538 1.88E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 PANTHER PTHR10459 224 696 6.2E-80 T 22-04-2016 RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Pfam PF13298 DNA polymerase Ligase (LigD) 41 145 1.6E-41 T 22-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 239 845 4.8E-220 T 22-04-2016 IPR014143 DNA ligase D RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 230 535 1.7E-107 T 22-04-2016 IPR014146 DNA ligase D, ligase domain RPIC_RS02460 7919582c15c11a41c3725952d995892a 863 Gene3D G3DSA:2.40.50.140 418 537 4.2E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 PANTHER PTHR11647:SF59 1 319 3.4E-167 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 342 2.2E-143 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 44.045 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 Pfam PF01979 Amidohydrolase family 12 311 2.6E-21 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 PIRSF PIRSF001237 1 344 2.3E-140 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 PANTHER PTHR11647 1 319 3.4E-167 T 22-04-2016 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 SUPERFAMILY SSF51556 3 342 5.11E-150 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS01780 6665db417405d185cdd4fc4aa9be4cfd 344 Gene3D G3DSA:3.20.20.140 2 342 2.8E-138 T 22-04-2016 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 Pfam PF01434 Peptidase family M41 384 590 3.6E-77 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 SUPERFAMILY SSF52540 148 393 1.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 SUPERFAMILY SSF140990 404 599 1.57E-71 T 22-04-2016 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 PANTHER PTHR23076 5 601 0.0 T 22-04-2016 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 Pfam PF06480 FtsH Extracellular 11 77 2.4E-8 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 591 4.4E-233 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 597 37.109 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 2.8E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 Gene3D G3DSA:1.10.8.60 334 407 5.5E-29 T 22-04-2016 RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 SMART SM00382 186 325 2.5E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 Gene3D G3DSA:3.40.50.300 149 333 6.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09990 7787bc1470eab934d2b7e1859d1f2444 628 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 SUPERFAMILY SSF103473 27 437 1.31E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 Pfam PF07690 Major Facilitator Superfamily 74 389 2.9E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 Gene3D G3DSA:1.20.1250.20 247 434 2.8E-22 T 22-04-2016 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 Gene3D G3DSA:1.20.1250.20 27 235 1.8E-25 T 22-04-2016 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 PANTHER PTHR23508 22 433 1.3E-119 T 22-04-2016 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 140 165 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 PANTHER PTHR23508:SF13 22 433 1.3E-119 T 22-04-2016 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 321 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS04100 12f4540779b61f675376fbdb9e0bc8ed 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 90 106 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 69 102 5.3E-10 T 22-04-2016 IPR011964 YVTN beta-propeller repeat RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 PANTHER PTHR13833 31 139 1.3E-23 T 22-04-2016 RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 PANTHER PTHR13833 164 344 1.3E-23 T 22-04-2016 RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 Pfam PF02239 Cytochrome D1 heme domain 148 297 1.6E-9 T 22-04-2016 RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 Pfam PF10282 Lactonase, 7-bladed beta-propeller 48 87 2.9E-4 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 SUPERFAMILY SSF50974 7 357 1.2E-76 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RPIC_RS12305 07b87eef135a2f6add9359b768528c5f 357 Gene3D G3DSA:2.130.10.10 28 347 3.2E-66 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS07020 97958ed9908bc3874fa2f021efd64f46 343 PANTHER PTHR30006 43 301 3.6E-47 T 22-04-2016 RPIC_RS07020 97958ed9908bc3874fa2f021efd64f46 343 Gene3D G3DSA:3.40.190.10 134 272 5.7E-44 T 22-04-2016 RPIC_RS07020 97958ed9908bc3874fa2f021efd64f46 343 Pfam PF13343 Bacterial extracellular solute-binding protein 83 327 8.9E-51 T 22-04-2016 RPIC_RS07020 97958ed9908bc3874fa2f021efd64f46 343 Gene3D G3DSA:3.40.190.10 8 129 5.2E-34 T 22-04-2016 RPIC_RS07020 97958ed9908bc3874fa2f021efd64f46 343 Gene3D G3DSA:3.40.190.10 273 328 5.2E-34 T 22-04-2016 RPIC_RS07020 97958ed9908bc3874fa2f021efd64f46 343 SUPERFAMILY SSF53850 36 337 6.85E-66 T 22-04-2016 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 Pfam PF03466 LysR substrate binding domain 88 293 1.7E-47 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 SUPERFAMILY SSF53850 89 296 5.43E-50 T 22-04-2016 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 PANTHER PTHR30537:SF5 1 303 1.3E-113 T 22-04-2016 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 Gene3D G3DSA:3.40.190.10 179 260 3.3E-22 T 22-04-2016 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 PANTHER PTHR30537 1 303 1.3E-113 T 22-04-2016 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 SUPERFAMILY SSF46785 4 111 1.27E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 Gene3D G3DSA:3.40.190.10 92 178 1.7E-26 T 22-04-2016 RPIC_RS16315 81c312fd2bd92107f3823c49ebb2d21e 306 Gene3D G3DSA:1.10.10.10 3 88 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01800 869cf2e269b645519d906438981c1264 130 SUPERFAMILY SSF54211 6 130 1.4E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS01800 869cf2e269b645519d906438981c1264 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.943 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid RPIC_RS01800 869cf2e269b645519d906438981c1264 130 PANTHER PTHR21569 7 130 1.3E-62 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RPIC_RS01800 869cf2e269b645519d906438981c1264 130 Gene3D G3DSA:3.30.230.10 6 130 1.6E-49 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS01800 869cf2e269b645519d906438981c1264 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC_RS01800 869cf2e269b645519d906438981c1264 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.7E-45 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 SUPERFAMILY SSF55021 257 348 8.58E-24 T 22-04-2016 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 SMART SM00382 31 228 2.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 Gene3D G3DSA:3.30.70.260 238 348 2.7E-32 T 22-04-2016 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 SUPERFAMILY SSF52540 1 241 1.05E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 PANTHER PTHR24220:SF455 3 346 5.9E-144 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 PANTHER PTHR24220 3 346 5.9E-144 T 22-04-2016 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 SMART SM00930 270 345 2.4E-29 T 22-04-2016 IPR018449 NIL domain RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 Pfam PF09383 NIL domain 273 344 3.2E-23 T 22-04-2016 IPR018449 NIL domain RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 Pfam PF00005 ABC transporter 22 170 7.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS03870 89793ba3554eb1638d02a2ad6debe2bf 349 Gene3D G3DSA:3.40.50.300 1 237 2.9E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 PANTHER PTHR22981:SF70 8 303 9.3E-128 T 22-04-2016 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 175 294 1.2E-37 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 SUPERFAMILY SSF48179 174 301 1.25E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 PANTHER PTHR22981 8 303 9.3E-128 T 22-04-2016 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 PIRSF PIRSF000103 1 303 4.6E-73 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 Gene3D G3DSA:1.10.1040.10 175 300 5.9E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 172 1.0E-47 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 Gene3D G3DSA:3.40.50.720 5 173 1.3E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 8 303 1.0E-123 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 RPIC_RS17245 d9cdfe571a0318e972c6789e6dbaca14 304 SUPERFAMILY SSF51735 7 172 2.96E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 3.0E-37 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 PIRSF PIRSF000161 1 263 1.8E-81 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 Gene3D G3DSA:3.40.50.720 1 161 6.0E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 261 9.0E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 SUPERFAMILY SSF51735 234 263 2.14E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 SUPERFAMILY SSF51735 1 124 2.14E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 PANTHER PTHR20836 1 263 5.5E-90 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 262 4.5E-90 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 262 35.512 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 SUPERFAMILY SSF55347 125 234 6.54E-36 T 22-04-2016 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 PANTHER PTHR20836:SF0 1 263 5.5E-90 T 22-04-2016 RPIC_RS14695 b9c300c326d4d0b16402afbe3ee21ece 263 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS02860 08aa11e0d6b9f16a7ee3cbd7ce3217f8 454 SUPERFAMILY SSF52540 81 414 6.05E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02860 08aa11e0d6b9f16a7ee3cbd7ce3217f8 454 PANTHER PTHR30258:SF3 37 439 3.7E-134 T 22-04-2016 RPIC_RS02860 08aa11e0d6b9f16a7ee3cbd7ce3217f8 454 Gene3D G3DSA:3.40.50.300 197 415 2.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02860 08aa11e0d6b9f16a7ee3cbd7ce3217f8 454 Pfam PF00437 Type II/IV secretion system protein 101 376 1.0E-85 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS02860 08aa11e0d6b9f16a7ee3cbd7ce3217f8 454 Gene3D G3DSA:3.30.450.90 96 194 4.6E-36 T 22-04-2016 RPIC_RS02860 08aa11e0d6b9f16a7ee3cbd7ce3217f8 454 PANTHER PTHR30258 37 439 3.7E-134 T 22-04-2016 RPIC_RS13570 a2e8a2d05ee3c6d86d3436d0bfc9e7ff 504 Gene3D G3DSA:3.60.21.10 159 464 9.9E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS13570 a2e8a2d05ee3c6d86d3436d0bfc9e7ff 504 Pfam PF00149 Calcineurin-like phosphoesterase 162 406 1.1E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS13570 a2e8a2d05ee3c6d86d3436d0bfc9e7ff 504 SUPERFAMILY SSF56300 159 488 1.54E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 Gene3D G3DSA:3.30.450.20 181 293 1.2E-10 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 PANTHER PTHR10799 170 323 4.0E-28 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 PANTHER PTHR10799 365 495 4.0E-28 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 PANTHER PTHR10799:SF750 170 323 4.0E-28 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 PANTHER PTHR10799:SF750 365 495 4.0E-28 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 Gene3D G3DSA:3.30.450.20 92 180 5.0E-9 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 492 1.2E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 Pfam PF02743 Cache domain 46 278 1.9E-15 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 495 6.7E-48 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 SUPERFAMILY SSF55073 337 494 1.37E-43 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 Gene3D G3DSA:3.30.70.270 334 495 1.4E-50 T 22-04-2016 RPIC_RS02680 d1be76c0d7efefb7481129dd5add1ca4 499 SMART SM00267 321 496 9.9E-58 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 SUPERFAMILY SSF52151 196 289 2.62E-70 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 SUPERFAMILY SSF52151 3 126 2.62E-70 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 PANTHER PTHR10982 1 305 9.5E-139 T 22-04-2016 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 Pfam PF00698 Acyl transferase domain 5 276 2.8E-36 T 22-04-2016 IPR014043 Acyl transferase RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 PIRSF PIRSF000446 1 309 3.4E-110 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 Gene3D G3DSA:3.30.70.250 123 194 4.6E-30 T 22-04-2016 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 SUPERFAMILY SSF55048 126 195 1.14E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 288 1.0E-106 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 304 1.3E-34 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 Gene3D G3DSA:3.40.366.10 195 287 1.1E-66 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RPIC_RS04505 d03fc67e26976c3deadfe99d72828cdb 309 Gene3D G3DSA:3.40.366.10 2 120 1.1E-66 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 PANTHER PTHR11076 1 340 2.3E-157 T 22-04-2016 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 SUPERFAMILY SSF100879 241 346 1.2E-22 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 Gene3D G3DSA:3.30.1490.100 238 349 4.9E-32 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 Gene3D G3DSA:3.30.70.270 66 164 6.2E-35 T 22-04-2016 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 Gene3D G3DSA:1.10.150.20 166 235 3.9E-26 T 22-04-2016 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 PANTHER PTHR11076:SF32 1 340 2.3E-157 T 22-04-2016 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 345 2.1E-7 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 348 37.558 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 SUPERFAMILY SSF56672 2 234 1.33E-93 T 22-04-2016 RPIC_RS09645 77fba5b4ce980eab86eb3acaa52e6adb 357 Pfam PF00817 impB/mucB/samB family 7 154 4.2E-54 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 PANTHER PTHR33175 1 91 7.1E-36 T 22-04-2016 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 SMART SM00411 2 91 6.1E-38 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 SUPERFAMILY SSF47729 3 92 2.06E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.7E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.7E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.7E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.7E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS13755 e9579825acb0d50e5fa29ee3cda51e6d 94 Gene3D G3DSA:4.10.520.10 3 92 1.4E-35 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS00075 2ac1bf872a968256101e3b27c2dee609 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 216 4.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS00075 2ac1bf872a968256101e3b27c2dee609 244 Gene3D G3DSA:1.10.3720.10 13 216 8.1E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS00075 2ac1bf872a968256101e3b27c2dee609 244 SUPERFAMILY SSF161098 15 202 4.69E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS00075 2ac1bf872a968256101e3b27c2dee609 244 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 1.6E-25 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS00075 2ac1bf872a968256101e3b27c2dee609 244 PANTHER PTHR30614 1 222 9.3E-74 T 22-04-2016 RPIC_RS00075 2ac1bf872a968256101e3b27c2dee609 244 PANTHER PTHR30614:SF18 1 222 9.3E-74 T 22-04-2016 RPIC_RS09810 a305ac152d6355ee89960f4e4b205a97 443 PANTHER PTHR30213:SF0 9 343 3.9E-81 T 22-04-2016 RPIC_RS09810 a305ac152d6355ee89960f4e4b205a97 443 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 306 22.611 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial RPIC_RS09810 a305ac152d6355ee89960f4e4b205a97 443 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 275 2.6E-66 T 22-04-2016 IPR017039 Virulence factor BrkB RPIC_RS09810 a305ac152d6355ee89960f4e4b205a97 443 Pfam PF03631 Virulence factor BrkB 29 275 3.7E-53 T 22-04-2016 IPR017039 Virulence factor BrkB RPIC_RS09810 a305ac152d6355ee89960f4e4b205a97 443 PANTHER PTHR30213 9 343 3.9E-81 T 22-04-2016 RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 30 199 36.883 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 PANTHER PTHR11776 26 202 6.3E-73 T 22-04-2016 RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 Gene3D G3DSA:3.40.50.2020 29 200 5.4E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 30 197 2.1E-62 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 Pfam PF00156 Phosphoribosyl transferase domain 77 178 3.2E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 SUPERFAMILY SSF53271 31 199 3.28E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01330 47ca52cba478f3658f4f7626717bbf27 202 PANTHER PTHR11776:SF0 26 202 6.3E-73 T 22-04-2016 RPIC_RS00420 f89b17ce70b6c6a811c6cdfe05a5139b 400 Pfam PF00909 Ammonium Transporter Family 12 389 3.6E-86 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC_RS00420 f89b17ce70b6c6a811c6cdfe05a5139b 400 PANTHER PTHR11730:SF6 1 388 1.0E-108 T 22-04-2016 RPIC_RS00420 f89b17ce70b6c6a811c6cdfe05a5139b 400 SUPERFAMILY SSF111352 7 374 7.32E-93 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC_RS00420 f89b17ce70b6c6a811c6cdfe05a5139b 400 PANTHER PTHR11730 1 388 1.0E-108 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC_RS00420 f89b17ce70b6c6a811c6cdfe05a5139b 400 Gene3D G3DSA:1.10.3430.10 3 374 1.1E-91 T 22-04-2016 IPR029020 Ammonium/urea transporter RPIC_RS00420 f89b17ce70b6c6a811c6cdfe05a5139b 400 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 SMART SM00014 70 182 7.3E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 290 305 1.0E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 326 342 1.0E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 244 252 1.0E-14 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 SUPERFAMILY SSF48317 7 189 9.55E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 Pfam PF01569 PAP2 superfamily 73 184 3.9E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 TIGRFAM TIGR00077 lspA: signal peptidase II 200 349 1.6E-39 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 PANTHER PTHR33695 178 345 1.3E-43 T 22-04-2016 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 198 351 15.054 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 Gene3D G3DSA:1.20.144.10 13 183 6.5E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 Pfam PF01252 Signal peptidase (SPase) II 207 345 7.9E-34 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS08895 c61936a4e44e126eddc5c6b469f8ce01 358 PANTHER PTHR33695:SF1 178 345 1.3E-43 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 3.7E-19 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 SUPERFAMILY SSF50475 7 212 1.34E-69 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 Gene3D G3DSA:2.30.110.10 16 212 2.0E-86 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 PANTHER PTHR10851 1 212 2.8E-110 T 22-04-2016 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 212 40.596 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 212 6.0E-88 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 PIRSF PIRSF000190 1 212 2.5E-82 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 119 2.1E-28 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS03510 df7f002b40952aa472ef4b8a597fbef5 212 PANTHER PTHR10851:SF0 1 212 2.8E-110 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Gene3D G3DSA:3.30.1840.10 112 303 1.4E-64 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 SUPERFAMILY SSF140356 9 110 4.97E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 685 3.2E-156 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Gene3D G3DSA:3.30.870.10 511 690 1.7E-73 T 22-04-2016 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 PIRSF PIRSF015589 4 705 2.1E-266 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 PANTHER PTHR30218:SF0 10 713 0.0 T 22-04-2016 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Pfam PF02503 Polyphosphate kinase middle domain 124 324 2.7E-56 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 SUPERFAMILY SSF143724 112 317 1.31E-59 T 22-04-2016 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 686 1.8E-293 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 PANTHER PTHR30218 10 713 0.0 T 22-04-2016 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 SUPERFAMILY SSF56024 318 505 4.08E-57 T 22-04-2016 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Hamap MF_00347 Polyphosphate kinase [ppk]. 6 692 32.442 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 SUPERFAMILY SSF56024 510 690 8.3E-71 T 22-04-2016 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 114 2.5E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 RPIC_RS09940 cf79dcf2584827a0d673495bf78cc6f3 723 Gene3D G3DSA:3.30.870.10 318 510 2.5E-80 T 22-04-2016 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 Pfam PF00672 HAMP domain 173 241 6.1E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 4.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 4.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 4.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 311 6.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 SMART SM00388 246 312 6.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 465 1.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PANTHER PTHR24423 12 18 8.4E-78 T 22-04-2016 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PANTHER PTHR24423 186 464 8.4E-78 T 22-04-2016 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 20 464 1.3E-174 T 22-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 SMART SM00387 355 467 2.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 SUPERFAMILY SSF55874 302 465 1.96E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 SMART SM00304 192 245 9.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 SUPERFAMILY SSF47384 230 311 1.39E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PANTHER PTHR24423:SF354 12 18 8.4E-78 T 22-04-2016 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 PANTHER PTHR24423:SF354 186 464 8.4E-78 T 22-04-2016 RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 Gene3D G3DSA:3.30.565.10 314 470 5.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08630 e3d5c24822665d2667d62f4391ea7751 487 Gene3D G3DSA:1.10.287.130 236 308 2.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS06605 46c980343099f95ee4750254501e6ef0 158 PANTHER PTHR12589 7 157 1.2E-32 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RPIC_RS06605 46c980343099f95ee4750254501e6ef0 158 Gene3D G3DSA:3.30.479.10 2 149 2.2E-38 T 22-04-2016 RPIC_RS06605 46c980343099f95ee4750254501e6ef0 158 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 7 121 1.0E-26 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RPIC_RS06605 46c980343099f95ee4750254501e6ef0 158 SUPERFAMILY SSF55620 4 149 6.12E-38 T 22-04-2016 RPIC_RS06605 46c980343099f95ee4750254501e6ef0 158 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 150 1.7E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 695 24.78 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 6.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 6.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 402 421 6.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 254 269 6.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 326 342 6.4E-31 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 695 2.2E-199 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 PANTHER PTHR30075 1 697 1.1E-256 T 22-04-2016 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 558 2.9E-194 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 Gene3D G3DSA:1.10.3210.10 377 473 5.1E-4 T 22-04-2016 IPR006674 HD domain RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 Pfam PF05746 DALR anticodon binding domain 590 683 8.1E-7 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 SUPERFAMILY SSF109604 350 498 1.32E-18 T 22-04-2016 RPIC_RS01965 32bd2005f4d100476c9cc236b144d5f9 697 Gene3D G3DSA:1.10.730.10 591 684 3.8E-4 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS18255 d61632715bb4f5ee2265ac83baa6ab35 395 SUPERFAMILY SSF54106 70 119 9.68E-8 T 22-04-2016 IPR018392 LysM domain RPIC_RS18255 d61632715bb4f5ee2265ac83baa6ab35 395 PANTHER PTHR34700:SF2 62 389 1.6E-36 T 22-04-2016 RPIC_RS18255 d61632715bb4f5ee2265ac83baa6ab35 395 SMART SM00257 70 119 5.5E-5 T 22-04-2016 IPR018392 LysM domain RPIC_RS18255 d61632715bb4f5ee2265ac83baa6ab35 395 Gene3D G3DSA:3.10.350.10 70 118 9.8E-8 T 22-04-2016 IPR018392 LysM domain RPIC_RS18255 d61632715bb4f5ee2265ac83baa6ab35 395 PANTHER PTHR34700 62 389 1.6E-36 T 22-04-2016 RPIC_RS18255 d61632715bb4f5ee2265ac83baa6ab35 395 Pfam PF01476 LysM domain 71 116 3.7E-11 T 22-04-2016 IPR018392 LysM domain RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 SUPERFAMILY SSF51735 3 163 1.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 2.0E-49 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 285 3.5E-26 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 Gene3D G3DSA:3.40.50.720 2 163 2.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 PANTHER PTHR22981 1 290 8.2E-96 T 22-04-2016 RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 PIRSF PIRSF000103 1 294 2.6E-68 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 Gene3D G3DSA:1.10.1040.10 165 291 3.3E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS13265 fae1bd7ff6ce62da439ed7298939b986 294 SUPERFAMILY SSF48179 163 287 9.35E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS01950 05f15a70aaa47ec97b72cf8abf6c14a6 292 PANTHER PTHR30399 56 282 3.1E-47 T 22-04-2016 RPIC_RS01950 05f15a70aaa47ec97b72cf8abf6c14a6 292 Pfam PF01863 Protein of unknown function DUF45 75 284 3.9E-62 T 22-04-2016 IPR002725 Protein of unknown function DUF45 RPIC_RS05815 06cdaac45d4210a2501daceb93682c14 258 Gene3D G3DSA:3.20.20.450 29 247 3.2E-47 T 22-04-2016 IPR001633 EAL domain RPIC_RS05815 06cdaac45d4210a2501daceb93682c14 258 Pfam PF00563 EAL domain 29 246 2.7E-43 T 22-04-2016 IPR001633 EAL domain RPIC_RS05815 06cdaac45d4210a2501daceb93682c14 258 SUPERFAMILY SSF141868 30 247 1.44E-56 T 22-04-2016 IPR001633 EAL domain RPIC_RS05815 06cdaac45d4210a2501daceb93682c14 258 PANTHER PTHR33121 28 258 1.5E-81 T 22-04-2016 RPIC_RS05815 06cdaac45d4210a2501daceb93682c14 258 SMART SM00052 5 250 6.8E-27 T 22-04-2016 IPR001633 EAL domain RPIC_RS05815 06cdaac45d4210a2501daceb93682c14 258 PANTHER PTHR33121:SF15 28 258 1.5E-81 T 22-04-2016 RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 Gene3D G3DSA:3.40.190.10 100 276 1.9E-59 T 22-04-2016 RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 24 327 7.1E-90 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 Pfam PF12849 PBP superfamily domain 21 302 3.8E-50 T 22-04-2016 IPR024370 PBP domain RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 SUPERFAMILY SSF53850 24 334 2.29E-84 T 22-04-2016 RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 PIRSF PIRSF002756 7 336 6.5E-82 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 PANTHER PTHR30570 1 335 4.0E-91 T 22-04-2016 RPIC_RS17370 df5153caadda2f7eed68c026fb620f1a 353 PANTHER PTHR30570:SF0 1 335 4.0E-91 T 22-04-2016 RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 264 37.124 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 1.6E-20 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 PANTHER PTHR12905 37 214 1.1E-16 T 22-04-2016 RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 PANTHER PTHR12905 4 15 1.1E-16 T 22-04-2016 RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 Gene3D G3DSA:3.60.21.10 1 216 8.3E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 SUPERFAMILY SSF56300 1 254 7.9E-50 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 PANTHER PTHR12905:SF7 37 214 1.1E-16 T 22-04-2016 RPIC_RS07000 b8a159d2c2efc31fc6af2a5e420b875d 282 PANTHER PTHR12905:SF7 4 15 1.1E-16 T 22-04-2016 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 PANTHER PTHR30307 4 347 8.4E-167 T 22-04-2016 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 SUPERFAMILY SSF111337 3 340 1.57E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 341 46.606 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 340 8.1E-131 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 Gene3D G3DSA:2.40.10.240 67 135 6.0E-11 T 22-04-2016 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 PANTHER PTHR30307:SF0 4 347 8.4E-167 T 22-04-2016 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 Pfam PF02547 Queuosine biosynthesis protein 4 340 3.9E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 Gene3D G3DSA:3.40.1780.10 3 65 1.4E-101 T 22-04-2016 RPIC_RS14555 b1604bf8712cfebb7f5c17dc9779b8cb 359 Gene3D G3DSA:3.40.1780.10 178 340 1.4E-101 T 22-04-2016 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 4.2E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.894 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 PANTHER PTHR10025 1 283 1.1E-164 T 22-04-2016 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 SUPERFAMILY SSF53223 1 121 5.66E-41 T 22-04-2016 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 2.1E-69 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.1E-41 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 Gene3D G3DSA:3.40.50.720 139 263 9.8E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09580 82214e070d417218e30e0901f0984809 289 Gene3D G3DSA:3.40.192.10 7 138 6.8E-51 T 22-04-2016 RPIC_RS09580 82214e070d417218e30e0901f0984809 289 SUPERFAMILY SSF51735 122 280 1.24E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09580 82214e070d417218e30e0901f0984809 289 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 RPIC_RS02260 b8cc82c578f523581378008e407922f4 439 PANTHER PTHR30349:SF20 131 399 6.5E-17 T 22-04-2016 RPIC_RS02260 b8cc82c578f523581378008e407922f4 439 Pfam PF00589 Phage integrase family 248 400 1.3E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS02260 b8cc82c578f523581378008e407922f4 439 SUPERFAMILY SSF56349 129 400 1.47E-37 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS02260 b8cc82c578f523581378008e407922f4 439 Gene3D G3DSA:1.10.443.10 240 401 8.8E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS02260 b8cc82c578f523581378008e407922f4 439 PANTHER PTHR30349 131 399 6.5E-17 T 22-04-2016 RPIC_RS02260 b8cc82c578f523581378008e407922f4 439 Gene3D G3DSA:1.10.150.130 129 226 2.2E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 25 207 1.3E-46 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Gene3D G3DSA:1.10.1040.10 211 310 1.5E-14 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 210 309 1.6E-12 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 PANTHER PTHR23309 16 480 2.9E-120 T 22-04-2016 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Gene3D G3DSA:3.90.226.10 512 656 3.7E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 SUPERFAMILY SSF51735 21 208 8.36E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Gene3D G3DSA:3.40.50.720 21 210 5.6E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 SUPERFAMILY SSF52096 510 822 1.3E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Gene3D G3DSA:1.10.1040.10 373 425 1.0E-6 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 Pfam PF00378 Enoyl-CoA hydratase/isomerase 513 653 1.5E-9 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 SUPERFAMILY SSF48179 359 480 8.5E-18 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 SUPERFAMILY SSF48179 208 322 6.46E-20 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS01710 a2f002747c4a326250e718e09072c214 826 PANTHER PTHR23309:SF2 16 480 2.9E-120 T 22-04-2016 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 424 8.2E-100 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 290 348 9.7E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 PANTHER PTHR11136 10 425 2.6E-114 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 Gene3D G3DSA:3.40.1190.10 7 289 6.8E-90 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 PIRSF PIRSF001563 1 432 9.7E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 SUPERFAMILY SSF53623 6 287 3.09E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 Pfam PF08245 Mur ligase middle domain 47 191 1.9E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 Gene3D G3DSA:3.90.190.20 291 426 3.5E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS10490 41873a67ce310aeb4e6c53adeccbe71b 432 SUPERFAMILY SSF53244 289 425 5.31E-31 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS13290 f98dc04cae3aae2abf57a18263764619 145 Pfam PF12802 MarR family 38 99 2.4E-13 T 22-04-2016 RPIC_RS13290 f98dc04cae3aae2abf57a18263764619 145 SMART SM00347 32 135 0.0029 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS13290 f98dc04cae3aae2abf57a18263764619 145 SUPERFAMILY SSF46785 6 130 4.22E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13290 f98dc04cae3aae2abf57a18263764619 145 Gene3D G3DSA:1.10.10.10 11 130 2.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13290 f98dc04cae3aae2abf57a18263764619 145 PANTHER PTHR33164 1 130 4.3E-12 T 22-04-2016 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 SUPERFAMILY SSF47384 426 499 7.46E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 Gene3D G3DSA:1.10.287.130 433 488 7.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 Pfam PF02743 Cache domain 77 331 4.4E-22 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PIRSF PIRSF036431 33 672 3.4E-239 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 Gene3D G3DSA:3.30.450.20 127 220 1.9E-6 T 22-04-2016 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 SUPERFAMILY SSF103190 94 222 6.87E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 SUPERFAMILY SSF55874 492 661 8.51E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 SMART SM00388 436 504 3.7E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 612 622 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 643 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 608 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PRINTS PR00344 Bacterial sensor protein C-terminal signature 649 662 1.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 Pfam PF00512 His Kinase A (phospho-acceptor) domain 436 498 3.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 547 662 3.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PANTHER PTHR24423:SF451 125 223 1.5E-83 T 22-04-2016 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PANTHER PTHR24423:SF451 413 663 1.5E-83 T 22-04-2016 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 SMART SM00387 546 665 2.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 Gene3D G3DSA:3.30.565.10 489 662 1.3E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PANTHER PTHR24423 125 223 1.5E-83 T 22-04-2016 RPIC_RS00905 70ecd28907d89de16b251aac94a874b8 672 PANTHER PTHR24423 413 663 1.5E-83 T 22-04-2016 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 37.238 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 PANTHER PTHR30305 1 317 1.8E-89 T 22-04-2016 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 PANTHER PTHR30305:SF1 1 317 1.8E-89 T 22-04-2016 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 Pfam PF02603 HPr Serine kinase N terminus 9 135 1.6E-23 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 Gene3D G3DSA:3.40.1390.20 12 137 3.7E-34 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 SUPERFAMILY SSF75138 11 137 7.19E-30 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 Gene3D G3DSA:3.40.50.300 141 313 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 Pfam PF07475 HPr Serine kinase C-terminal domain 140 305 8.8E-61 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 SUPERFAMILY SSF53795 140 306 1.77E-34 T 22-04-2016 RPIC_RS01270 57558eb9373f3009f20be04551d1e48e 324 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 309 2.1E-95 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RPIC_RS01915 d38e8b4b0a109ccafe0e0f0cb25b0f42 357 PANTHER PTHR33540 18 351 8.5E-103 T 22-04-2016 RPIC_RS01915 d38e8b4b0a109ccafe0e0f0cb25b0f42 357 Gene3D G3DSA:3.90.1200.10 127 346 3.4E-72 T 22-04-2016 RPIC_RS01915 d38e8b4b0a109ccafe0e0f0cb25b0f42 357 Pfam PF01636 Phosphotransferase enzyme family 37 270 3.0E-29 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC_RS01915 d38e8b4b0a109ccafe0e0f0cb25b0f42 357 SUPERFAMILY SSF56112 17 341 4.72E-51 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS01915 d38e8b4b0a109ccafe0e0f0cb25b0f42 357 Gene3D G3DSA:3.30.200.20 12 109 9.8E-31 T 22-04-2016 RPIC_RS01915 d38e8b4b0a109ccafe0e0f0cb25b0f42 357 PANTHER PTHR33540:SF1 18 351 8.5E-103 T 22-04-2016 RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 Pfam PF00005 ABC transporter 28 175 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 SUPERFAMILY SSF50331 251 350 7.65E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 Pfam PF08402 TOBE domain 282 349 1.1E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 SUPERFAMILY SSF52540 13 254 5.21E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 PANTHER PTHR24220 14 260 3.5E-114 T 22-04-2016 RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 PANTHER PTHR24220:SF150 14 260 3.5E-114 T 22-04-2016 RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 Gene3D G3DSA:3.40.50.300 13 247 1.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07005 ec5b1c5889bc9f66a6af9ac8cabdeca3 353 SMART SM00382 37 225 2.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Gene3D G3DSA:2.40.30.10 866 962 4.2E-37 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Gene3D G3DSA:3.40.50.300 457 623 1.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 SUPERFAMILY SSF52540 461 634 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 SUPERFAMILY SSF46955 3 51 2.01E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 ProSitePatterns PS01176 Initiation factor 2 signature. 915 937 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Gene3D G3DSA:2.40.30.10 636 729 1.1E-23 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 PANTHER PTHR23115:SF184 817 962 2.0E-204 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 PANTHER PTHR23115:SF184 432 447 2.0E-204 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 PANTHER PTHR23115:SF184 465 792 2.0E-204 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 SUPERFAMILY SSF50447 637 719 2.53E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 SUPERFAMILY SSF52156 742 871 8.5E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 466 623 7.4E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 962 17.601 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Gene3D G3DSA:3.40.50.10050 765 843 2.5E-26 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 4.8E-7 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 386 436 1.2E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 SUPERFAMILY SSF50447 866 962 2.95E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Gene3D G3DSA:3.30.56.50 3 51 2.9E-17 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 381 964 1.5E-264 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Pfam PF00009 Elongation factor Tu GTP binding domain 469 624 4.1E-35 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 PANTHER PTHR23115 817 962 2.0E-204 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 PANTHER PTHR23115 432 447 2.0E-204 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 PANTHER PTHR23115 465 792 2.0E-204 T 22-04-2016 RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 8.5E-12 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial RPIC_RS05555 7a08ba90cd4204dccf17dd5efb80d7b9 964 Pfam PF11987 Translation-initiation factor 2 749 854 6.0E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 RPIC_RS12795 ca5c1d61eff667a8a3c9687dc48aa3a1 62 Pfam PF11943 Protein of unknown function (DUF3460) 4 60 2.7E-28 T 22-04-2016 IPR021853 Protein of unknown function DUF3460 RPIC_RS08820 629cc44c661dc9ac63291419315b83ed 307 PANTHER PTHR31272:SF4 10 236 1.4E-20 T 22-04-2016 RPIC_RS08820 629cc44c661dc9ac63291419315b83ed 307 PANTHER PTHR31272 10 236 1.4E-20 T 22-04-2016 RPIC_RS08820 629cc44c661dc9ac63291419315b83ed 307 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 14 189 1.3E-13 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 5 616 5.2E-214 T 22-04-2016 IPR022458 Conjugative coupling factor TraG/TraD RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 Pfam PF01935 Domain of unknown function DUF87 158 210 1.4E-6 T 22-04-2016 IPR002789 Helicase HerA, central domain RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 Gene3D G3DSA:3.40.50.300 415 614 5.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 Gene3D G3DSA:3.40.50.300 126 243 5.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 Pfam PF12696 TraM recognition site of TraD and TraG 468 595 1.2E-20 T 22-04-2016 IPR032689 TraD/TraG, TraM recognition site RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 SUPERFAMILY SSF52540 124 316 3.91E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07510 cdeb446d11f33696f09ddf198a6b0860 618 SUPERFAMILY SSF52540 369 607 3.91E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 SUPERFAMILY SSF100950 301 544 5.58E-59 T 22-04-2016 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 SUPERFAMILY SSF100950 3 262 1.14E-69 T 22-04-2016 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 PIRSF PIRSF000858 1 552 2.7E-200 T 22-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 Pfam PF01144 Coenzyme A transferase 5 252 5.6E-20 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 PANTHER PTHR13707 1 283 1.6E-160 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 PANTHER PTHR13707 300 542 1.6E-160 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 PANTHER PTHR13707:SF38 1 283 1.6E-160 T 22-04-2016 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 PANTHER PTHR13707:SF38 300 542 1.6E-160 T 22-04-2016 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 SMART SM00882 3 252 1.8E-51 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 Gene3D G3DSA:3.40.1080.10 3 251 2.5E-54 T 22-04-2016 RPIC_RS01695 cc2792fde8a9c834fe1a043deb08b2a8 554 Gene3D G3DSA:3.40.810.20 301 543 4.2E-52 T 22-04-2016 RPIC_RS10770 8dc9e8c09e8ae80c2800b91e2b40efce 388 PANTHER PTHR30482:SF4 126 362 4.4E-172 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RPIC_RS10770 8dc9e8c09e8ae80c2800b91e2b40efce 388 PANTHER PTHR30482:SF4 2 99 4.4E-172 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RPIC_RS10770 8dc9e8c09e8ae80c2800b91e2b40efce 388 PANTHER PTHR30482 126 362 4.4E-172 T 22-04-2016 RPIC_RS10770 8dc9e8c09e8ae80c2800b91e2b40efce 388 PANTHER PTHR30482 2 99 4.4E-172 T 22-04-2016 RPIC_RS10770 8dc9e8c09e8ae80c2800b91e2b40efce 388 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 47 361 2.6E-135 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC RPIC_RS10770 8dc9e8c09e8ae80c2800b91e2b40efce 388 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 350 3.5E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 SUPERFAMILY SSF46548 21 101 1.67E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 PIRSF PIRSF000139 7 418 3.4E-108 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 Pfam PF12838 4Fe-4S dicluster domain 24 89 3.0E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 PANTHER PTHR32479:SF2 14 417 4.3E-111 T 22-04-2016 RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 PANTHER PTHR32479 14 417 4.3E-111 T 22-04-2016 RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 Gene3D G3DSA:1.10.1060.10 12 102 1.8E-22 T 22-04-2016 RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 Pfam PF02754 Cysteine-rich domain 315 399 4.2E-12 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 Pfam PF02754 Cysteine-rich domain 182 264 2.0E-10 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC_RS14310 c234d24513f982de0bb80fa9d7b55c5d 418 SUPERFAMILY SSF54862 19 233 1.84E-11 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 SMART SM00448 9 120 2.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 PANTHER PTHR32071 449 527 5.2E-189 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 PANTHER PTHR32071 6 398 5.2E-189 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Pfam PF00158 Sigma-54 interaction domain 148 312 1.1E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 497 517 2.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 480 497 2.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Pfam PF02954 Bacterial regulatory protein, Fis family 474 514 5.0E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Pfam PF00072 Response regulator receiver domain 11 119 2.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 SMART SM00382 166 310 3.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 PANTHER PTHR32071:SF28 449 527 5.2E-189 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 PANTHER PTHR32071:SF28 6 398 5.2E-189 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Gene3D G3DSA:3.40.50.2300 11 137 3.8E-33 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 SUPERFAMILY SSF46689 361 403 5.38E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 SUPERFAMILY SSF46689 464 516 5.38E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 SUPERFAMILY SSF52172 11 190 2.85E-39 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Gene3D G3DSA:1.10.10.60 469 513 1.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 SUPERFAMILY SSF52540 148 388 1.65E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Gene3D G3DSA:1.10.8.60 319 389 1.8E-22 T 22-04-2016 RPIC_RS15035 13b5f2b01634e6cd77dcfdebceacbee3 541 Gene3D G3DSA:3.40.50.300 146 318 1.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 PANTHER PTHR24220:SF516 21 393 6.3E-154 T 22-04-2016 RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 Pfam PF00005 ABC transporter 35 184 7.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 Pfam PF00005 ABC transporter 287 438 2.7E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 PANTHER PTHR24220 21 393 6.3E-154 T 22-04-2016 RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 Gene3D G3DSA:3.40.50.300 18 243 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 SUPERFAMILY SSF52540 287 496 8.04E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 ProSitePatterns PS00211 ABC transporters family signature. 411 425 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 SUPERFAMILY SSF52540 19 247 4.28E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 Gene3D G3DSA:3.40.50.300 288 496 3.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 SMART SM00382 293 487 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14820 49a3e27f88c25e07d889021b16fa8569 509 SMART SM00382 44 240 1.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS18420 29f99f749428262ce0efe994c73e46b9 164 PANTHER PTHR36302:SF1 12 160 8.3E-27 T 22-04-2016 RPIC_RS18420 29f99f749428262ce0efe994c73e46b9 164 Pfam PF04314 Protein of unknown function (DUF461) 31 133 2.0E-34 T 22-04-2016 IPR007410 DR1885-like metal-binding protein RPIC_RS18420 29f99f749428262ce0efe994c73e46b9 164 PANTHER PTHR36302 12 160 8.3E-27 T 22-04-2016 RPIC_RS18420 29f99f749428262ce0efe994c73e46b9 164 SUPERFAMILY SSF110087 10 143 1.44E-44 T 22-04-2016 IPR007410 DR1885-like metal-binding protein RPIC_RS08420 490c5ebf9bd89d4c2a44bfe2fdc32757 435 SUPERFAMILY SSF103473 18 414 2.62E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS08420 490c5ebf9bd89d4c2a44bfe2fdc32757 435 Pfam PF07690 Major Facilitator Superfamily 25 341 3.0E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS08420 490c5ebf9bd89d4c2a44bfe2fdc32757 435 PANTHER PTHR23504:SF18 1 343 5.3E-25 T 22-04-2016 RPIC_RS08420 490c5ebf9bd89d4c2a44bfe2fdc32757 435 Gene3D G3DSA:1.20.1250.20 229 417 1.6E-9 T 22-04-2016 RPIC_RS08420 490c5ebf9bd89d4c2a44bfe2fdc32757 435 Gene3D G3DSA:1.20.1250.20 18 208 6.0E-23 T 22-04-2016 RPIC_RS08420 490c5ebf9bd89d4c2a44bfe2fdc32757 435 PANTHER PTHR23504 1 343 5.3E-25 T 22-04-2016 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PANTHER PTHR20854:SF4 1 269 1.2E-95 T 22-04-2016 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 Gene3D G3DSA:3.30.540.10 2 154 2.5E-56 T 22-04-2016 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site RPIC_RS04950 9138f830957fa2330cb198038231070b 270 SUPERFAMILY SSF56655 1 259 4.58E-82 T 22-04-2016 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PANTHER PTHR20854 1 269 1.2E-95 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.7E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 214 228 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.7E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 107 126 1.7E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 159 185 1.7E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 201 213 1.7E-26 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 Gene3D G3DSA:3.40.190.80 155 262 5.4E-33 T 22-04-2016 RPIC_RS04950 9138f830957fa2330cb198038231070b 270 Pfam PF00459 Inositol monophosphatase family 2 252 3.3E-67 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 RPIC_RS03435 e68f27c5db0a75d4ea0e0404e37a8d31 125 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 12 124 2.3E-20 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 PANTHER PTHR11061 7 450 4.3E-98 T 22-04-2016 RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 PANTHER PTHR11061:SF30 7 450 4.3E-98 T 22-04-2016 RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 6 450 68.646 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 Gene3D G3DSA:3.40.50.150 247 449 6.1E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 SUPERFAMILY SSF50249 7 67 6.28E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 267 448 1.3E-16 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 SUPERFAMILY SSF53335 70 449 1.88E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site RPIC_RS05230 e369a24ea14c90a91000cc4258011544 450 Gene3D G3DSA:2.40.50.140 6 81 2.7E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS00115 f021ad63103a8a3c2e141cc77e0aa883 181 Pfam PF00583 Acetyltransferase (GNAT) family 77 154 1.1E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS00115 f021ad63103a8a3c2e141cc77e0aa883 181 PANTHER PTHR23091 23 179 5.5E-23 T 22-04-2016 RPIC_RS00115 f021ad63103a8a3c2e141cc77e0aa883 181 SUPERFAMILY SSF55729 21 179 4.43E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS00115 f021ad63103a8a3c2e141cc77e0aa883 181 Gene3D G3DSA:3.40.630.30 12 179 7.1E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS00115 f021ad63103a8a3c2e141cc77e0aa883 181 PANTHER PTHR23091:SF251 23 179 5.5E-23 T 22-04-2016 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Gene3D G3DSA:1.10.8.60 360 427 8.8E-30 T 22-04-2016 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Pfam PF00308 Bacterial dnaA protein 194 411 2.3E-87 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 SMART SM00382 226 360 9.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Pfam PF11638 DnaA N-terminal domain 3 64 1.5E-16 T 22-04-2016 IPR024633 DnaA N-terminal domain RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 528 31.975 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PANTHER PTHR30050 1 103 1.1E-193 T 22-04-2016 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PANTHER PTHR30050 192 529 1.1E-193 T 22-04-2016 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 SUPERFAMILY SSF48295 425 528 2.88E-37 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 SMART SM00760 437 506 1.2E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Gene3D G3DSA:1.10.1750.10 428 528 1.9E-41 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 527 2.8E-169 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Gene3D G3DSA:3.40.50.300 191 358 5.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 227 247 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 487 506 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 325 352 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 291 305 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 259 273 4.7E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 ProSitePatterns PS01008 DnaA protein signature. 487 506 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 438 506 2.2E-31 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 SUPERFAMILY SSF52540 194 405 3.33E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PANTHER PTHR30050:SF2 1 103 1.1E-193 T 22-04-2016 RPIC_RS00005 41aafaf5146d607c7369bcaa5a53c7fc 529 PANTHER PTHR30050:SF2 192 529 1.1E-193 T 22-04-2016 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 PANTHER PTHR26402 9 192 1.3E-41 T 22-04-2016 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 PANTHER PTHR26402:SF151 9 192 1.3E-41 T 22-04-2016 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 SUPERFAMILY SSF52172 10 131 8.11E-26 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 Pfam PF00072 Response regulator receiver domain 11 122 3.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 SUPERFAMILY SSF46894 142 192 2.18E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 Gene3D G3DSA:1.10.10.10 150 192 1.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 SMART SM00448 9 122 7.8E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 2.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 2.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 2.8E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 Gene3D G3DSA:3.40.50.2300 10 149 1.3E-27 T 22-04-2016 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 SMART SM00421 145 194 3.4E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16890 354e3fb73f36e3d2b2d0289d31acfacd 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 191 2.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 PANTHER PTHR13847:SF196 1 378 1.3E-28 T 22-04-2016 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 Gene3D G3DSA:3.50.50.60 328 373 1.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 Gene3D G3DSA:3.50.50.60 166 244 1.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 Gene3D G3DSA:3.50.50.60 15 116 1.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 PANTHER PTHR13847 1 378 1.3E-28 T 22-04-2016 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 SUPERFAMILY SSF51905 328 373 1.13E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 SUPERFAMILY SSF51905 26 245 1.13E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08555 2047a4369416bb97b1316871f84a2f9f 389 Pfam PF01266 FAD dependent oxidoreductase 27 364 5.0E-33 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 Gene3D G3DSA:3.40.50.1000 576 717 4.7E-49 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 Gene3D G3DSA:3.40.50.1000 420 465 4.7E-49 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 SUPERFAMILY SSF81665 348 443 3.14E-12 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 SUPERFAMILY SSF81665 215 250 3.14E-12 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 SUPERFAMILY SSF56784 447 467 4.01E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 SUPERFAMILY SSF56784 506 755 4.01E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 174 757 5.9E-180 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 Gene3D G3DSA:3.40.1110.10 466 575 1.2E-21 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 Pfam PF00122 E1-E2 ATPase 217 440 1.4E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 218 727 2.8E-83 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 463 1.9E-26 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 671 683 1.9E-26 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 667 1.9E-26 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 297 311 1.9E-26 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 595 605 1.9E-26 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 584 1.9E-26 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 451 457 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PANTHER PTHR24093 102 758 9.8E-214 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 SUPERFAMILY SSF81653 250 347 4.45E-25 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 Gene3D G3DSA:2.70.150.10 174 347 1.9E-28 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 Pfam PF00702 haloacid dehalogenase-like hydrolase 445 662 4.3E-37 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 156 758 9.0E-173 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 216 235 2.6E-15 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 625 642 2.6E-15 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 370 384 2.6E-15 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 432 447 2.6E-15 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 159 178 2.6E-15 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 721 735 2.6E-15 T 22-04-2016 RPIC_RS09065 a71610d899a3e2659d3626eef73044a6 762 PRINTS PR00943 Copper-transporting ATPase signature 236 254 2.6E-15 T 22-04-2016 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 8.6E-73 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 SUPERFAMILY SSF51735 1 182 8.9E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.559 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 Gene3D G3DSA:1.10.1040.10 29 325 4.7E-115 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 SUPERFAMILY SSF48179 183 333 2.04E-71 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 PANTHER PTHR21371 1 337 1.4E-184 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 5.3E-133 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS10950 da94043eb3c20eff8d3ab61961ffa66a 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.9E-66 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 Gene3D G3DSA:1.10.10.60 390 445 9.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 Pfam PF02954 Bacterial regulatory protein, Fis family 403 442 1.3E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 PANTHER PTHR32071 142 456 1.7E-136 T 22-04-2016 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 SMART SM00382 164 307 4.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 SUPERFAMILY SSF52540 144 385 1.02E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 SUPERFAMILY SSF46689 356 445 2.96E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 Gene3D G3DSA:3.40.50.300 142 316 2.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 Gene3D G3DSA:1.10.8.60 317 389 1.2E-20 T 22-04-2016 RPIC_RS02940 e57622d5e5c0cd3fe2e97ad162af413a 459 Pfam PF00158 Sigma-54 interaction domain 144 310 8.2E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS17710 376dfd862b19f417fd15609ba2a72163 349 Gene3D G3DSA:3.40.50.1820 68 266 4.2E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17710 376dfd862b19f417fd15609ba2a72163 349 PANTHER PTHR22946:SF0 71 267 7.1E-22 T 22-04-2016 RPIC_RS17710 376dfd862b19f417fd15609ba2a72163 349 PANTHER PTHR22946 71 267 7.1E-22 T 22-04-2016 RPIC_RS17710 376dfd862b19f417fd15609ba2a72163 349 Pfam PF01738 Dienelactone hydrolase family 72 268 3.6E-14 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RPIC_RS17710 376dfd862b19f417fd15609ba2a72163 349 SUPERFAMILY SSF53474 65 267 2.93E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 Gene3D G3DSA:1.20.1250.20 232 433 4.9E-11 T 22-04-2016 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 Gene3D G3DSA:1.20.1250.20 19 198 8.6E-7 T 22-04-2016 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 PANTHER PTHR10434 354 635 1.9E-119 T 22-04-2016 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 Pfam PF07690 Major Facilitator Superfamily 19 333 1.2E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 SUPERFAMILY SSF69593 415 612 5.1E-33 T 22-04-2016 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 SMART SM00563 464 580 2.4E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 Gene3D G3DSA:3.40.1130.10 449 577 2.1E-20 T 22-04-2016 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 SUPERFAMILY SSF103473 15 433 1.12E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 PANTHER PTHR10434:SF15 354 635 1.9E-119 T 22-04-2016 RPIC_RS09785 cfd626a51036abf9056ebbe0c3a98b16 635 Pfam PF01553 Acyltransferase 449 577 2.7E-27 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 Pfam PF13525 Outer membrane lipoprotein 142 261 1.2E-12 T 22-04-2016 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 Pfam PF16331 TolA binding protein trimerisation 65 128 5.6E-18 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 PANTHER PTHR26312:SF74 151 261 2.7E-16 T 22-04-2016 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 PANTHER PTHR26312:SF74 24 29 2.7E-16 T 22-04-2016 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 Gene3D G3DSA:1.25.40.10 144 250 7.4E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 SUPERFAMILY SSF48452 144 246 4.02E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 139 257 1.3E-37 T 22-04-2016 IPR014162 Tol-Pal system, YbgF RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 PANTHER PTHR26312 151 261 2.7E-16 T 22-04-2016 RPIC_RS03350 0e6c534d2253b487d0ac66ff915fa19f 261 PANTHER PTHR26312 24 29 2.7E-16 T 22-04-2016 RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 Pfam PF13426 PAS domain 31 124 8.0E-14 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 Pfam PF00990 Diguanylate cyclase, GGDEF domain 259 411 1.2E-44 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SUPERFAMILY SSF55785 139 245 2.58E-27 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SMART SM00086 205 247 5.4E-7 T 22-04-2016 IPR001610 PAC motif RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SMART SM00086 83 125 8.1E-9 T 22-04-2016 IPR001610 PAC motif RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 Pfam PF00989 PAS fold 135 244 5.9E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 Gene3D G3DSA:3.30.450.20 18 124 3.6E-28 T 22-04-2016 RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 PANTHER PTHR24423 8 260 1.2E-42 T 22-04-2016 RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SUPERFAMILY SSF55785 18 124 3.14E-25 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SMART SM00267 247 415 1.8E-53 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 256 414 1.0E-47 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SUPERFAMILY SSF55073 263 413 1.18E-44 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SMART SM00091 133 199 2.3E-7 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 SMART SM00091 7 77 0.01 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 Gene3D G3DSA:3.30.70.270 260 414 9.1E-50 T 22-04-2016 RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 Gene3D G3DSA:3.30.450.20 142 245 2.0E-26 T 22-04-2016 RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 254 1.6E-20 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 8 130 4.7E-16 T 22-04-2016 IPR000014 PAS domain RPIC_RS05810 52760ccd80b232f9010b444ca4830847 416 PANTHER PTHR24423:SF382 8 260 1.2E-42 T 22-04-2016 RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 PANTHER PTHR10264 39 437 1.8E-108 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 SMART SM00244 124 301 4.3E-24 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 PANTHER PTHR10264:SF51 39 437 1.8E-108 T 22-04-2016 IPR010201 HflK GO:0016021 RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 Pfam PF01145 SPFH domain / Band 7 family 128 317 1.6E-26 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 TIGRFAM TIGR01933 hflK: HflK protein 126 402 3.5E-87 T 22-04-2016 IPR010201 HflK GO:0016021 RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 SUPERFAMILY SSF117892 181 308 1.19E-19 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS05295 450eb8acf1cf0ba8a70f212765da455a 460 Pfam PF12221 Bacterial membrane protein N terminal 29 85 4.9E-11 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 PANTHER PTHR24220 22 316 1.3E-188 T 22-04-2016 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 PANTHER PTHR24220 349 459 1.3E-188 T 22-04-2016 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 SUPERFAMILY SSF52540 323 572 8.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 256 287 3.4E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 552 586 4.7E-9 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 SMART SM00382 49 254 2.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 SMART SM00382 358 558 1.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 Gene3D G3DSA:3.40.50.300 15 283 3.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 PANTHER PTHR24220:SF442 22 316 1.3E-188 T 22-04-2016 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 PANTHER PTHR24220:SF442 349 459 1.3E-188 T 22-04-2016 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 SUPERFAMILY SSF52540 20 276 6.46E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 Gene3D G3DSA:3.40.50.300 321 574 2.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 Pfam PF00005 ABC transporter 350 499 8.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06220 2bc4d73962004db8c73bfd45fca6992c 629 Pfam PF00005 ABC transporter 41 204 4.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS12300 3c2ff2bb459bfe2ebcc5728a21a3a7c8 191 PANTHER PTHR30529 7 188 3.9E-45 T 22-04-2016 RPIC_RS12300 3c2ff2bb459bfe2ebcc5728a21a3a7c8 191 SUPERFAMILY SSF81342 12 189 1.65E-31 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS12300 3c2ff2bb459bfe2ebcc5728a21a3a7c8 191 Pfam PF01292 Prokaryotic cytochrome b561 15 185 3.4E-24 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC_RS01500 7315f8fb838d068577bb316b03dddd7a 565 Gene3D G3DSA:3.40.50.980 128 290 1.9E-13 T 22-04-2016 RPIC_RS01500 7315f8fb838d068577bb316b03dddd7a 565 SUPERFAMILY SSF56801 17 455 4.32E-44 T 22-04-2016 RPIC_RS01500 7315f8fb838d068577bb316b03dddd7a 565 Gene3D G3DSA:3.10.129.10 465 555 1.0E-13 T 22-04-2016 IPR029069 HotDog domain RPIC_RS01500 7315f8fb838d068577bb316b03dddd7a 565 Pfam PF00501 AMP-binding enzyme 123 338 2.5E-17 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS01500 7315f8fb838d068577bb316b03dddd7a 565 SUPERFAMILY SSF54637 465 556 4.41E-15 T 22-04-2016 IPR029069 HotDog domain RPIC_RS01500 7315f8fb838d068577bb316b03dddd7a 565 Gene3D G3DSA:3.30.300.30 348 456 1.9E-9 T 22-04-2016 RPIC_RS05680 5e8382f6f0507da5aec80deac197bdef 453 SUPERFAMILY SSF53383 76 451 9.28E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS05680 5e8382f6f0507da5aec80deac197bdef 453 Gene3D G3DSA:3.40.640.10 121 337 1.6E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS05680 5e8382f6f0507da5aec80deac197bdef 453 Pfam PF00155 Aminotransferase class I and II 104 446 7.4E-48 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS05680 5e8382f6f0507da5aec80deac197bdef 453 PANTHER PTHR13693 87 453 1.4E-128 T 22-04-2016 RPIC_RS05680 5e8382f6f0507da5aec80deac197bdef 453 Gene3D G3DSA:3.90.1150.10 338 448 2.3E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 360 378 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 438 459 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 175 193 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 146 158 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 103 127 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 29 54 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 255 276 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 204 223 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 325 346 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 301 316 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 76 99 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 407 4.5E-122 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 30 533 7.3E-213 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 SUPERFAMILY SSF81442 26 533 1.09E-193 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 38 478 6.2E-153 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PANTHER PTHR10422:SF27 15 534 0.0 T 22-04-2016 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 PANTHER PTHR10422 15 534 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 Gene3D G3DSA:1.20.210.10 18 533 9.3E-222 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01065 3c2cbba82daf89df57225bd574507239 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 257 311 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS01760 52ca8f7516f03bfc98dfa5fc25fef920 227 Gene3D G3DSA:1.10.3720.10 13 225 4.2E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01760 52ca8f7516f03bfc98dfa5fc25fef920 227 PANTHER PTHR30614:SF1 1 225 2.9E-109 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 RPIC_RS01760 52ca8f7516f03bfc98dfa5fc25fef920 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 120 7.2E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS01760 52ca8f7516f03bfc98dfa5fc25fef920 227 PANTHER PTHR30614 1 225 2.9E-109 T 22-04-2016 RPIC_RS01760 52ca8f7516f03bfc98dfa5fc25fef920 227 SUPERFAMILY SSF161098 18 217 1.24E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01760 52ca8f7516f03bfc98dfa5fc25fef920 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 226 4.8E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 SUPERFAMILY SSF55874 289 452 8.64E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 2.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 SMART SM00388 234 299 5.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 453 1.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 Gene3D G3DSA:3.30.565.10 302 453 1.6E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 PANTHER PTHR24423 78 89 1.1E-87 T 22-04-2016 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 PANTHER PTHR24423 213 602 1.1E-87 T 22-04-2016 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 Gene3D G3DSA:3.40.50.2300 484 604 3.2E-25 T 22-04-2016 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 Pfam PF00072 Response regulator receiver domain 485 593 1.8E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 SMART SM00387 345 456 8.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 409 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 SMART SM00448 483 595 5.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 SUPERFAMILY SSF52172 485 606 2.56E-25 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 SUPERFAMILY SSF47384 217 299 1.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS13420 b399a26a53c6d32dab440874670aca93 610 Gene3D G3DSA:1.10.287.130 227 295 5.0E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS04325 9fb19dc54c0af15ef6b9e2f41254359f 335 PANTHER PTHR32196:SF35 30 331 2.9E-98 T 22-04-2016 RPIC_RS04325 9fb19dc54c0af15ef6b9e2f41254359f 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 320 1.7E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS04325 9fb19dc54c0af15ef6b9e2f41254359f 335 PANTHER PTHR32196 30 331 2.9E-98 T 22-04-2016 RPIC_RS03475 c857ba0be206c4f6f5ab5b1a3c0e1aef 209 Hamap MF_01969 Kynurenine formamidase [kynB]. 4 208 44.247 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RPIC_RS03475 c857ba0be206c4f6f5ab5b1a3c0e1aef 209 Gene3D G3DSA:3.50.30.50 4 205 7.6E-52 T 22-04-2016 RPIC_RS03475 c857ba0be206c4f6f5ab5b1a3c0e1aef 209 PANTHER PTHR31118 2 205 2.3E-45 T 22-04-2016 RPIC_RS03475 c857ba0be206c4f6f5ab5b1a3c0e1aef 209 TIGRFAM TIGR03035 trp_arylform: arylformamidase 5 208 1.3E-101 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RPIC_RS03475 c857ba0be206c4f6f5ab5b1a3c0e1aef 209 Pfam PF04199 Putative cyclase 7 151 4.9E-16 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 RPIC_RS03475 c857ba0be206c4f6f5ab5b1a3c0e1aef 209 SUPERFAMILY SSF102198 4 206 1.57E-55 T 22-04-2016 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 PANTHER PTHR30111:SF1 1 207 7.8E-55 T 22-04-2016 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 PANTHER PTHR30111:SF1 230 327 7.8E-55 T 22-04-2016 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 Gene3D G3DSA:3.55.30.10 1 184 7.0E-63 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 Gene3D G3DSA:3.90.1280.10 265 322 1.7E-24 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 SUPERFAMILY SSF64397 3 188 2.49E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 SUPERFAMILY SSF64397 216 271 2.49E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 SUPERFAMILY SSF118352 264 321 2.09E-18 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 PIRSF PIRSF005261 1 324 9.3E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 Pfam PF01430 Hsp33 protein 3 312 7.2E-83 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 Gene3D G3DSA:1.10.287.480 213 264 1.2E-8 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 PANTHER PTHR30111 1 207 7.8E-55 T 22-04-2016 RPIC_RS04815 7adaffa0b581823d047c97d0b3fde1b5 337 PANTHER PTHR30111 230 327 7.8E-55 T 22-04-2016 RPIC_RS01135 64832c26579ead26a9f923c68414c11b 336 Gene3D G3DSA:1.20.970.10 26 90 1.7E-16 T 22-04-2016 RPIC_RS01135 64832c26579ead26a9f923c68414c11b 336 Gene3D G3DSA:3.40.1030.10 103 326 2.3E-26 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS01135 64832c26579ead26a9f923c68414c11b 336 Pfam PF02885 Glycosyl transferase family, helical bundle domain 35 86 2.4E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC_RS01135 64832c26579ead26a9f923c68414c11b 336 SUPERFAMILY SSF47648 27 93 1.13E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC_RS01135 64832c26579ead26a9f923c68414c11b 336 SUPERFAMILY SSF52418 97 329 4.08E-42 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 PANTHER PTHR36918:SF1 1 166 7.7E-55 T 22-04-2016 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 Pfam PF02556 Preprotein translocase subunit SecB 11 148 6.9E-54 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 31.239 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 PANTHER PTHR36918 1 166 7.7E-55 T 22-04-2016 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 13 148 8.5E-48 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 Gene3D G3DSA:3.10.420.10 10 157 1.8E-59 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 SUPERFAMILY SSF54611 5 147 5.45E-50 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 7.41E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 7.41E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 7.41E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS01030 abf0817b65180d622f28d738cff8e5e2 172 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 7.41E-29 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 Pfam PF00547 Urease, gamma subunit 2 99 2.1E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 Gene3D G3DSA:3.30.280.10 2 99 5.0E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 2 99 1.4E-52 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 PANTHER PTHR33569 2 100 5.8E-46 T 22-04-2016 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 PANTHER PTHR33569:SF1 2 100 5.8E-46 T 22-04-2016 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 SUPERFAMILY SSF54111 2 99 1.57E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 PIRSF PIRSF001223 1 100 1.5E-50 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10750 da8a3f9c5207471c9e6f7cb0f6d8da21 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.796 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 321 4.7E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 PANTHER PTHR24220 11 321 2.4E-137 T 22-04-2016 RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 Pfam PF00005 ABC transporter 30 187 4.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 SMART SM00382 38 245 8.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 Gene3D G3DSA:3.40.50.300 9 261 3.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 SUPERFAMILY SSF52540 10 258 1.81E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 1.0E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS10255 b877345b4005938f643794e1243b4f1c 334 PANTHER PTHR24220:SF535 11 321 2.4E-137 T 22-04-2016 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Pfam PF04545 Sigma-70, region 4 312 364 1.4E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Gene3D G3DSA:1.10.10.10 308 373 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PANTHER PTHR30603 69 373 1.9E-113 T 22-04-2016 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 SUPERFAMILY SSF88659 215 291 1.61E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 SUPERFAMILY SSF88946 104 212 1.96E-43 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Gene3D G3DSA:1.10.601.10 73 211 2.3E-51 T 22-04-2016 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 SUPERFAMILY SSF88659 275 372 1.7E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Gene3D G3DSA:1.10.10.10 215 266 1.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PRINTS PR00046 Major sigma-70 factor signature 316 328 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PRINTS PR00046 Major sigma-70 factor signature 166 179 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PRINTS PR00046 Major sigma-70 factor signature 352 363 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PRINTS PR00046 Major sigma-70 factor signature 337 352 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PRINTS PR00046 Major sigma-70 factor signature 190 198 1.4E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Pfam PF00140 Sigma-70 factor, region 1.2 104 137 3.6E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 PANTHER PTHR30603:SF15 69 373 1.9E-113 T 22-04-2016 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 94 377 2.8E-136 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 337 363 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 138 366 2.9E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 166 179 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Pfam PF04542 Sigma-70 region 2 142 211 5.8E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Pfam PF04539 Sigma-70 region 3 222 299 8.9E-14 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05220 4f00e171cae5a57b7fbcd9b3030d0b9f 378 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 59 378 38.364 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 TIGRFAM TIGR00165 S18: ribosomal protein bS18 24 91 1.7E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 PANTHER PTHR13479 23 94 1.1E-22 T 22-04-2016 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 40 92 2.0E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 57 64 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 79 89 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 65 79 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 PRINTS PR00974 Ribosomal protein S18 family signature 47 57 2.9E-14 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 21 92 19.619 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 Gene3D G3DSA:4.10.640.10 27 93 3.2E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 ProSitePatterns PS00057 Ribosomal protein S18 signature. 40 63 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 SUPERFAMILY SSF46911 18 93 1.22E-27 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05880 6901d790301394c53a7f9d294dc89865 95 Pfam PF01084 Ribosomal protein S18 38 87 1.7E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03275 ebc4ed49b7ad7aa586433ca44a453099 214 ProSitePatterns PS00018 EF-hand calcium-binding domain. 135 147 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC_RS03275 ebc4ed49b7ad7aa586433ca44a453099 214 Gene3D G3DSA:3.30.700.10 54 86 5.8E-6 T 22-04-2016 RPIC_RS03275 ebc4ed49b7ad7aa586433ca44a453099 214 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 52 74 2.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS03275 ebc4ed49b7ad7aa586433ca44a453099 214 Pfam PF13633 Prokaryotic N-terminal methylation site 52 77 1.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS03275 ebc4ed49b7ad7aa586433ca44a453099 214 SUPERFAMILY SSF54523 54 162 1.96E-18 T 22-04-2016 RPIC_RS03275 ebc4ed49b7ad7aa586433ca44a453099 214 Pfam PF12019 Type II transport protein GspH 92 204 4.0E-16 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 PANTHER PTHR32125:SF1 1 229 7.6E-106 T 22-04-2016 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 SUPERFAMILY SSF75217 1 229 1.11E-95 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 Gene3D G3DSA:1.10.1270.20 162 243 2.2E-31 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 Gene3D G3DSA:3.40.1280.10 1 161 1.2E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 PIRSF PIRSF000386 1 250 1.2E-94 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 262 107.274 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 PANTHER PTHR32125 1 229 7.6E-106 T 22-04-2016 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 222 1.2E-59 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC_RS03950 48c2dadeec40f6b528e9889322209512 262 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 5.4E-91 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RPIC_RS07870 dea095ac494ff581c3dc322c6a19e6e8 310 SUPERFAMILY SSF53335 111 227 1.24E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS07870 dea095ac494ff581c3dc322c6a19e6e8 310 Pfam PF02384 N-6 DNA Methylase 126 218 1.2E-7 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIC_RS07870 dea095ac494ff581c3dc322c6a19e6e8 310 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 146 5.0E-6 T 22-04-2016 RPIC_RS07870 dea095ac494ff581c3dc322c6a19e6e8 310 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 162 176 5.0E-6 T 22-04-2016 RPIC_RS07870 dea095ac494ff581c3dc322c6a19e6e8 310 Gene3D G3DSA:3.40.50.150 126 226 2.0E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS16125 61488f0a4e2ac3a2ca83e55cb2de364f 233 Gene3D G3DSA:3.40.50.300 16 203 1.5E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16125 61488f0a4e2ac3a2ca83e55cb2de364f 233 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 202 1.7E-61 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RPIC_RS16125 61488f0a4e2ac3a2ca83e55cb2de364f 233 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 207 25.716 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 RPIC_RS16125 61488f0a4e2ac3a2ca83e55cb2de364f 233 SUPERFAMILY SSF52540 11 206 3.31E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16125 61488f0a4e2ac3a2ca83e55cb2de364f 233 PANTHER PTHR11649 17 207 7.1E-39 T 22-04-2016 RPIC_RS16125 61488f0a4e2ac3a2ca83e55cb2de364f 233 Pfam PF01926 50S ribosome-binding GTPase 26 150 6.4E-17 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 SMART SM00344 6 120 1.8E-41 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 PANTHER PTHR30154 1 160 4.7E-61 T 22-04-2016 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.4E-22 T 22-04-2016 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 Pfam PF01037 Lrp/AsnC ligand binding domain 73 151 8.9E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 PANTHER PTHR30154:SF28 1 160 4.7E-61 T 22-04-2016 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.23E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.23E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.23E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 SUPERFAMILY SSF46785 5 65 5.68E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 SUPERFAMILY SSF54909 66 160 2.01E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 Gene3D G3DSA:1.10.10.10 3 57 6.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16770 6c9fc5b40f985d0a4401a85f699e7a7e 162 Gene3D G3DSA:3.30.70.920 59 148 1.7E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS14460 dbb3a04d8d4da940f1140f5f99102e93 215 Pfam PF08722 TnsA endonuclease N terminal 44 124 1.1E-13 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal RPIC_RS14460 dbb3a04d8d4da940f1140f5f99102e93 215 Pfam PF08721 TnsA endonuclease C terminal 126 201 2.3E-15 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal RPIC_RS08255 dbb3a04d8d4da940f1140f5f99102e93 215 Pfam PF08722 TnsA endonuclease N terminal 44 124 1.1E-13 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal RPIC_RS08255 dbb3a04d8d4da940f1140f5f99102e93 215 Pfam PF08721 TnsA endonuclease C terminal 126 201 2.3E-15 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 PANTHER PTHR39455 2 251 2.4E-56 T 22-04-2016 RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 SUPERFAMILY SSF160950 2 250 5.23E-88 T 22-04-2016 RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 33.264 T 22-04-2016 IPR009777 Cell division protein ZapD RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 Gene3D G3DSA:1.10.3900.10 10 171 3.9E-67 T 22-04-2016 RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 Gene3D G3DSA:2.60.440.10 172 250 4.6E-20 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 Pfam PF07072 Protein of unknown function (DUF1342) 16 226 3.0E-82 T 22-04-2016 IPR009777 Cell division protein ZapD RPIC_RS15150 82506b39f62df45c3ed9e6bbfbd340f9 252 PANTHER PTHR39455:SF1 2 251 2.4E-56 T 22-04-2016 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 SUPERFAMILY SSF53927 17 267 8.72E-72 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 Pfam PF02634 FdhD/NarQ family 34 267 2.8E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 PANTHER PTHR30592 4 268 3.2E-120 T 22-04-2016 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 Gene3D G3DSA:3.40.140.10 131 270 4.2E-54 T 22-04-2016 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 PANTHER PTHR30592:SF2 4 268 3.2E-120 T 22-04-2016 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 PIRSF PIRSF015626 5 270 1.5E-80 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 RPIC_RS12705 c023b2e45fd622b88a6af05195a62fb9 291 Gene3D G3DSA:3.10.20.10 35 117 1.3E-17 T 22-04-2016 RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 Gene3D G3DSA:2.40.50.140 157 177 1.0E-54 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 Gene3D G3DSA:2.40.50.140 1 121 1.0E-54 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 PANTHER PTHR10302 3 177 5.7E-50 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 SUPERFAMILY SSF50249 3 177 2.57E-59 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 37.154 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 Pfam PF00436 Single-strand binding protein family 4 107 1.5E-40 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RPIC_RS07665 bcee49d710e59a35905080109628a6de 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 177 2.9E-52 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:3.40.50.740 142 216 7.3E-76 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:3.40.50.740 401 671 7.3E-76 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:2.40.40.20 813 824 3.4E-50 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:2.40.40.20 861 999 3.4E-50 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:2.40.40.20 685 718 3.4E-50 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:2.20.25.90 87 139 2.4E-15 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 SUPERFAMILY SSF50692 832 999 1.4E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Gene3D G3DSA:3.40.228.10 217 400 1.7E-63 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Pfam PF00384 Molybdopterin oxidoreductase 142 597 1.7E-55 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 SUPERFAMILY SSF53706 84 646 6.28E-201 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Pfam PF01568 Molydopterin dinucleotide binding domain 867 993 5.4E-18 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615 776 997 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615 544 636 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615 425 528 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615 34 406 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 44 66 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 87 136 4.7E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 SMART SM00926 85 139 6.6E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 90 107 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615:SF140 776 997 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615:SF140 544 636 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615:SF140 425 528 7.9E-293 T 22-04-2016 RPIC_RS12735 4a4c35e93c06434b1d527d8e03c8e163 1001 PANTHER PTHR11615:SF140 34 406 7.9E-293 T 22-04-2016 RPIC_RS14615 b933765d99045984a0e50f3f5237e647 164 Pfam PF00293 NUDIX domain 9 126 6.5E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS14615 b933765d99045984a0e50f3f5237e647 164 Gene3D G3DSA:3.90.79.10 7 153 2.3E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS14615 b933765d99045984a0e50f3f5237e647 164 PANTHER PTHR22769:SF14 6 146 1.5E-18 T 22-04-2016 RPIC_RS14615 b933765d99045984a0e50f3f5237e647 164 SUPERFAMILY SSF55811 4 148 3.79E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS14615 b933765d99045984a0e50f3f5237e647 164 PANTHER PTHR22769 6 146 1.5E-18 T 22-04-2016 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 Gene3D G3DSA:3.40.50.620 2 200 3.1E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 SMART SM00840 238 293 1.1E-23 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 SUPERFAMILY SSF47323 211 325 3.53E-23 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 324 2.0E-108 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 117 138 1.1E-18 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 86 104 1.1E-18 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 2 207 5.7E-86 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 PANTHER PTHR10890 1 325 9.0E-153 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 Pfam PF09190 DALR domain 238 293 3.6E-16 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 Gene3D G3DSA:1.20.120.640 202 282 8.5E-22 T 22-04-2016 RPIC_RS23330 03bd2d3185a816a177a5c9b331c5d6c7 325 SUPERFAMILY SSF52374 2 208 4.61E-59 T 22-04-2016 RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 PANTHER PTHR24220 3 199 1.8E-57 T 22-04-2016 RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 Gene3D G3DSA:3.40.50.300 2 210 5.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 PANTHER PTHR24220:SF117 3 199 1.8E-57 T 22-04-2016 RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 SUPERFAMILY SSF52540 2 212 4.63E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 SMART SM00382 30 200 8.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05720 6817bd4cb7f706a1397c492d570a5ac3 217 Pfam PF00005 ABC transporter 21 149 1.8E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS17865 4e423cf801da986f736515cb03c4f5c2 349 PANTHER PTHR30024:SF8 3 282 1.4E-32 T 22-04-2016 RPIC_RS17865 4e423cf801da986f736515cb03c4f5c2 349 Gene3D G3DSA:3.40.190.10 134 256 4.0E-15 T 22-04-2016 RPIC_RS17865 4e423cf801da986f736515cb03c4f5c2 349 PANTHER PTHR30024 3 282 1.4E-32 T 22-04-2016 RPIC_RS17865 4e423cf801da986f736515cb03c4f5c2 349 Pfam PF09084 NMT1/THI5 like 56 269 1.5E-22 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC_RS17865 4e423cf801da986f736515cb03c4f5c2 349 SUPERFAMILY SSF53850 38 281 1.09E-31 T 22-04-2016 RPIC_RS05895 cd451d91b70e344e9a345149290d592a 208 Gene3D G3DSA:1.20.58.220 113 199 5.7E-4 T 22-04-2016 RPIC_RS05895 cd451d91b70e344e9a345149290d592a 208 PANTHER PTHR37298 1 208 4.0E-53 T 22-04-2016 RPIC_RS05895 cd451d91b70e344e9a345149290d592a 208 Pfam PF01865 Protein of unknown function DUF47 8 206 1.0E-33 T 22-04-2016 IPR018445 Putative phosphate transport regulator RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 PANTHER PTHR11908 21 166 6.7E-39 T 22-04-2016 RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 Gene3D G3DSA:3.10.20.30 22 96 2.2E-25 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 Pfam PF01799 [2Fe-2S] binding domain 95 167 2.5E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 75 1.6E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 SUPERFAMILY SSF47741 101 173 1.57E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 Gene3D G3DSA:1.10.150.120 97 176 1.7E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 SUPERFAMILY SSF54292 18 109 1.62E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS10115 a5185986f2e3fcaa6be21bf2c0885035 191 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 61 69 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 Gene3D G3DSA:3.40.50.2300 11 135 5.4E-33 T 22-04-2016 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 Gene3D G3DSA:1.10.10.10 151 209 8.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 SUPERFAMILY SSF52172 12 160 1.41E-32 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 SMART SM00421 149 206 8.6E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 Pfam PF00072 Response regulator receiver domain 15 125 7.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 SMART SM00448 13 125 4.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 2.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 2.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 2.6E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 PANTHER PTHR26402:SF613 13 207 9.2E-65 T 22-04-2016 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 PANTHER PTHR26402 13 207 9.2E-65 T 22-04-2016 RPIC_RS09575 43160510edf4aaf15512bf3a6ea64524 211 SUPERFAMILY SSF46894 143 209 5.1E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 Pfam PF16925 Bacterial transcriptional repressor C-terminal 94 192 1.1E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 SUPERFAMILY SSF46689 16 85 1.44E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 Gene3D G3DSA:1.10.357.10 15 199 5.4E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 SUPERFAMILY SSF48498 91 204 1.36E-25 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 65 1.2E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 PANTHER PTHR30055:SF20 6 204 2.0E-65 T 22-04-2016 RPIC_RS05190 fb6c3120dc3e2822ed902b67bf1df058 209 PANTHER PTHR30055 6 204 2.0E-65 T 22-04-2016 RPIC_RS14480 2434554fc3987f8660267e603160773f 307 Gene3D G3DSA:1.20.1510.10 21 218 2.4E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS14480 2434554fc3987f8660267e603160773f 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 300 4.5E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14480 2434554fc3987f8660267e603160773f 307 PANTHER PTHR11562:SF18 17 300 6.4E-86 T 22-04-2016 RPIC_RS14480 2434554fc3987f8660267e603160773f 307 SUPERFAMILY SSF161111 18 219 8.76E-54 T 22-04-2016 RPIC_RS14480 2434554fc3987f8660267e603160773f 307 Gene3D G3DSA:3.30.70.1350 219 300 4.4E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS14480 2434554fc3987f8660267e603160773f 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 299 9.7E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS14480 2434554fc3987f8660267e603160773f 307 SUPERFAMILY SSF160240 221 300 2.88E-21 T 22-04-2016 RPIC_RS14480 2434554fc3987f8660267e603160773f 307 PANTHER PTHR11562 17 300 6.4E-86 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS14480 2434554fc3987f8660267e603160773f 307 Pfam PF01545 Cation efflux family 25 218 1.2E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08235 2434554fc3987f8660267e603160773f 307 Gene3D G3DSA:1.20.1510.10 21 218 2.4E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS08235 2434554fc3987f8660267e603160773f 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 300 4.5E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08235 2434554fc3987f8660267e603160773f 307 PANTHER PTHR11562:SF18 17 300 6.4E-86 T 22-04-2016 RPIC_RS08235 2434554fc3987f8660267e603160773f 307 SUPERFAMILY SSF161111 18 219 8.76E-54 T 22-04-2016 RPIC_RS08235 2434554fc3987f8660267e603160773f 307 Gene3D G3DSA:3.30.70.1350 219 300 4.4E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS08235 2434554fc3987f8660267e603160773f 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 223 299 9.7E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS08235 2434554fc3987f8660267e603160773f 307 SUPERFAMILY SSF160240 221 300 2.88E-21 T 22-04-2016 RPIC_RS08235 2434554fc3987f8660267e603160773f 307 PANTHER PTHR11562 17 300 6.4E-86 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08235 2434554fc3987f8660267e603160773f 307 Pfam PF01545 Cation efflux family 25 218 1.2E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 SMART SM00987 37 197 4.5E-29 T 22-04-2016 RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 SMART SM00986 37 197 4.5E-29 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 SUPERFAMILY SSF52141 16 200 1.33E-49 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 PANTHER PTHR42160:SF1 8 197 1.0E-67 T 22-04-2016 RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 PANTHER PTHR42160 8 197 1.0E-67 T 22-04-2016 RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 Gene3D G3DSA:3.40.470.10 17 201 2.9E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS05980 f8798ab24a924c15151db7a013e687fb 205 Pfam PF03167 Uracil DNA glycosylase superfamily 41 196 2.2E-23 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 SUPERFAMILY SSF81301 11 287 1.91E-71 T 22-04-2016 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 21 945 19.362 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 SUPERFAMILY SSF81593 288 452 9.42E-42 T 22-04-2016 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Pfam PF08335 GlnD PII-uridylyltransferase 827 915 1.4E-6 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Pfam PF08335 GlnD PII-uridylyltransferase 299 452 7.3E-46 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Gene3D G3DSA:3.30.460.10 652 811 6.9E-51 T 22-04-2016 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Gene3D G3DSA:3.30.460.10 108 285 8.1E-58 T 22-04-2016 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 PANTHER PTHR30621 12 939 3.1E-237 T 22-04-2016 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 SUPERFAMILY SSF81593 815 944 1.02E-28 T 22-04-2016 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 567 805 3.1E-64 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 29 269 1.2E-63 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 RPIC_RS14255 0e63da2c327ad9bcefdb4919beec957b 947 SUPERFAMILY SSF81301 540 814 1.05E-74 T 22-04-2016 RPIC_RS03690 77d9cba6844bb871b092350eb80dae97 261 SMART SM01007 25 210 1.1E-54 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS03690 77d9cba6844bb871b092350eb80dae97 261 Gene3D G3DSA:3.40.225.10 20 237 9.6E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS03690 77d9cba6844bb871b092350eb80dae97 261 SUPERFAMILY SSF53639 17 234 4.51E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS03690 77d9cba6844bb871b092350eb80dae97 261 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 210 1.6E-43 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS03690 77d9cba6844bb871b092350eb80dae97 261 PANTHER PTHR10672 16 260 1.1E-95 T 22-04-2016 RPIC_RS07390 e6b6476a6bd8fa5c84b14aee05e77ce6 325 Pfam PF13401 AAA domain 47 175 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS07390 e6b6476a6bd8fa5c84b14aee05e77ce6 325 SUPERFAMILY SSF52540 4 286 4.03E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07390 e6b6476a6bd8fa5c84b14aee05e77ce6 325 Gene3D G3DSA:3.40.50.300 28 178 6.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12250 85e6ca413b36cabd756fb5dc543e7c7c 161 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 13 159 9.0E-64 T 22-04-2016 IPR030991 Cytochrome c-550 PedF RPIC_RS12250 85e6ca413b36cabd756fb5dc543e7c7c 161 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 63 154 5.7E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS12250 85e6ca413b36cabd756fb5dc543e7c7c 161 Gene3D G3DSA:1.10.760.10 58 158 3.9E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS12250 85e6ca413b36cabd756fb5dc543e7c7c 161 SUPERFAMILY SSF46626 5 156 8.19E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS11605 dd72cf5b93fe6ad48c352043fe492fab 116 Pfam PF13223 Protein of unknown function (DUF4031) 3 85 1.3E-28 T 22-04-2016 IPR025109 Domain of unknown function DUF4031 RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 Gene3D G3DSA:3.40.50.1240 15 214 4.3E-70 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 17 209 2.6E-70 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 SUPERFAMILY SSF53254 15 217 5.5E-67 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 PANTHER PTHR23029:SF1 17 214 1.0E-60 T 22-04-2016 RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 PANTHER PTHR23029 17 214 1.0E-60 T 22-04-2016 RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 19 28 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RPIC_RS01835 479a9784163d2fc59d2b447f62b9baeb 226 SMART SM00855 16 170 2.4E-25 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 6 405 9.6E-230 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 4 396 55.134 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 PIRSF PIRSF005572 5 385 6.6E-134 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 198 217 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 PANTHER PTHR11601:SF34 7 405 2.0E-233 T 22-04-2016 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 SUPERFAMILY SSF53383 8 392 1.2E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 Pfam PF00266 Aminotransferase class-V 8 370 2.5E-88 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 PANTHER PTHR11601 7 405 2.0E-233 T 22-04-2016 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 Gene3D G3DSA:3.90.1150.10 256 375 4.2E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS04345 dcdccf59aafb149303d09630d4e87355 405 Gene3D G3DSA:3.40.640.10 20 255 1.4E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS11750 5b1f072f9696e50e79f12c910cd446ab 492 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 28 476 2.4E-120 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 RPIC_RS11750 5b1f072f9696e50e79f12c910cd446ab 492 PANTHER PTHR30618 17 492 2.4E-214 T 22-04-2016 RPIC_RS11750 5b1f072f9696e50e79f12c910cd446ab 492 TIGRFAM TIGR00800 ncs1: NCS1 nucleoside transporter family 23 456 2.5E-116 T 22-04-2016 IPR012681 Nucleobase cation symporter-1, NCS1 GO:0005215|GO:0006810|GO:0016020 RPIC_RS11750 5b1f072f9696e50e79f12c910cd446ab 492 PANTHER PTHR30618:SF0 17 492 2.4E-214 T 22-04-2016 RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 PANTHER PTHR11935 24 131 2.7E-41 T 22-04-2016 RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 PANTHER PTHR11935 171 292 2.7E-41 T 22-04-2016 RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 Gene3D G3DSA:3.60.15.10 15 132 2.9E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 Gene3D G3DSA:3.60.15.10 175 300 2.9E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 PANTHER PTHR11935:SF109 24 131 2.7E-41 T 22-04-2016 RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 PANTHER PTHR11935:SF109 171 292 2.7E-41 T 22-04-2016 RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 SUPERFAMILY SSF56281 16 356 2.75E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 SMART SM00849 42 270 5.9E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00630 9a9d3bfbd3ce40d5c5fd8055dc3afaa6 359 Pfam PF00753 Metallo-beta-lactamase superfamily 41 270 3.5E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 12 278 43.119 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 SUPERFAMILY SSF56281 12 278 6.44E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 PANTHER PTHR11935:SF7 12 279 3.0E-85 T 22-04-2016 RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 15 278 3.5E-96 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 191 278 2.7E-27 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 PIRSF PIRSF005457 8 278 2.8E-97 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 Pfam PF00753 Metallo-beta-lactamase superfamily 25 190 3.3E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 SMART SM00849 22 190 4.7E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 PANTHER PTHR11935 12 279 3.0E-85 T 22-04-2016 RPIC_RS10040 6b113716e9f1e26a79f588648d17793d 279 Gene3D G3DSA:3.60.15.10 14 278 1.7E-86 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS16020 8a837af95efaedb3262c92b9a8bedab5 224 PANTHER PTHR36920 1 224 8.7E-48 T 22-04-2016 RPIC_RS16020 8a837af95efaedb3262c92b9a8bedab5 224 SUPERFAMILY SSF56925 36 224 1.41E-29 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS16020 8a837af95efaedb3262c92b9a8bedab5 224 Gene3D G3DSA:2.40.160.20 36 224 1.3E-54 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS16020 8a837af95efaedb3262c92b9a8bedab5 224 PANTHER PTHR36920:SF1 1 224 8.7E-48 T 22-04-2016 RPIC_RS16020 8a837af95efaedb3262c92b9a8bedab5 224 Pfam PF03922 OmpW family 35 224 4.1E-43 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 SUPERFAMILY SSF53067 3 252 3.76E-94 T 22-04-2016 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 PANTHER PTHR10196 1 487 1.6E-230 T 22-04-2016 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 447 8.6E-63 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 PIRSF PIRSF000538 1 495 8.5E-172 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 249 5.5E-79 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 Gene3D G3DSA:3.30.420.40 1 250 8.3E-103 T 22-04-2016 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 2 489 3.1E-214 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 SUPERFAMILY SSF53067 252 491 1.3E-80 T 22-04-2016 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 Hamap MF_00186 Glycerol kinase [glpK]. 1 494 56.436 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 Gene3D G3DSA:3.30.420.40 251 490 1.0E-96 T 22-04-2016 RPIC_RS16510 6cce7e2c1b6eaec3b322309f07880f2f 498 PANTHER PTHR10196:SF69 1 487 1.6E-230 T 22-04-2016 RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 3 579 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 SUPERFAMILY SSF52518 1 185 3.17E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 Gene3D G3DSA:3.40.50.1220 185 335 1.7E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 SUPERFAMILY SSF52467 186 376 1.14E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 5.8E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 SUPERFAMILY SSF52518 369 569 1.22E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 PANTHER PTHR18968 1 579 0.0 T 22-04-2016 RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 Gene3D G3DSA:3.40.50.970 3 182 5.9E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 Gene3D G3DSA:3.40.50.970 362 585 7.4E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 2.2E-34 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 1.1E-35 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC_RS17230 82fd5bd65968e55731ecb7d7bd02a1d6 591 PANTHER PTHR18968:SF14 1 579 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 18 192 15.369 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 Gene3D G3DSA:3.90.1140.10 18 194 1.5E-34 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 SUPERFAMILY SSF55144 19 192 1.29E-31 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 19 192 1.1E-21 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 PANTHER PTHR35561:SF1 19 194 3.4E-25 T 22-04-2016 RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 PANTHER PTHR35561 19 194 3.4E-25 T 22-04-2016 RPIC_RS06555 0011e899c897e7e5bef2dfc1435b565f 194 Pfam PF13563 2'-5' RNA ligase superfamily 33 175 1.2E-12 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 Pfam PF00773 RNB domain 249 580 4.0E-105 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SUPERFAMILY SSF50249 527 582 4.57E-143 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SUPERFAMILY SSF50249 620 660 4.57E-143 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SUPERFAMILY SSF50249 176 491 4.57E-143 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 Gene3D G3DSA:1.10.10.10 12 67 3.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 Pfam PF08206 Ribonuclease B OB domain 76 133 1.4E-22 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SMART SM00357 75 134 2.3E-8 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 PANTHER PTHR23355:SF9 12 579 3.1E-233 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 PANTHER PTHR23355 606 745 3.1E-233 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SUPERFAMILY SSF50249 662 742 2.42E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SMART SM00955 249 581 2.0E-186 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 64 743 2.6E-211 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SUPERFAMILY SSF50249 56 136 1.65E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 Pfam PF00575 S1 RNA binding domain 659 740 7.7E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 Hamap MF_01895 Ribonuclease R [rnr]. 28 743 57.01 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 PANTHER PTHR23355 12 579 3.1E-233 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 SMART SM00316 660 743 8.1E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 PANTHER PTHR23355:SF9 606 745 3.1E-233 T 22-04-2016 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 583 1.3E-210 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RPIC_RS05330 ccc87beb4bbcfcf58bee36f03e4d152f 864 Gene3D G3DSA:2.40.50.140 662 743 1.2E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16575 45462997d74d4563822e619bbb44be8c 348 SUPERFAMILY SSF56935 27 348 3.05E-68 T 22-04-2016 RPIC_RS16575 45462997d74d4563822e619bbb44be8c 348 Pfam PF13609 Gram-negative porin 14 323 5.1E-44 T 22-04-2016 RPIC_RS16575 45462997d74d4563822e619bbb44be8c 348 Gene3D G3DSA:2.40.160.10 27 348 3.4E-76 T 22-04-2016 IPR023614 Porin domain RPIC_RS16575 45462997d74d4563822e619bbb44be8c 348 PRINTS PR00184 Neisseria sp. porin signature 61 86 1.0E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16575 45462997d74d4563822e619bbb44be8c 348 PRINTS PR00184 Neisseria sp. porin signature 262 286 1.0E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS12345 50469f1763a5f5e15ebc90cfa4d7e830 111 Pfam PF03413 Peptidase propeptide and YPEB domain 39 95 8.5E-10 T 22-04-2016 IPR025711 PepSY domain RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 23 313 4.1E-109 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 PANTHER PTHR30349:SF5 20 313 8.8E-105 T 22-04-2016 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 22 103 7.0E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 Gene3D G3DSA:1.10.443.10 125 304 2.1E-55 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 Gene3D G3DSA:1.10.150.130 20 111 4.6E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 18 314 29.344 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 SUPERFAMILY SSF56349 120 312 2.53E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 SUPERFAMILY SSF47823 19 113 2.94E-30 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 18 314 60.379 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 PANTHER PTHR30349 20 313 8.8E-105 T 22-04-2016 RPIC_RS13895 84c8d94fda03e45a70d999bad2597dd0 314 Pfam PF00589 Phage integrase family 125 299 2.0E-49 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 Pfam PF03315 Serine dehydratase beta chain 4 156 1.6E-58 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 PANTHER PTHR30182:SF1 1 456 2.8E-239 T 22-04-2016 RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 3.9E-216 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 Gene3D G3DSA:3.30.1330.90 11 157 1.5E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 SUPERFAMILY SSF143548 17 157 2.88E-46 T 22-04-2016 IPR029009 Allosteric substrate binding domain RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 PANTHER PTHR30182 1 456 2.8E-239 T 22-04-2016 RPIC_RS17295 da011f0f69906e87e0932263c01a461e 458 Pfam PF03313 Serine dehydratase alpha chain 188 452 9.2E-104 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 3.3E-30 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 Gene3D G3DSA:1.10.10.600 1 64 1.3E-30 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 2.2E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 SUPERFAMILY SSF140319 1 62 6.93E-25 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 PIRSF PIRSF039003 1 64 7.8E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 PANTHER PTHR37532:SF1 1 64 7.3E-23 T 22-04-2016 RPIC_RS04380 0075cc573cf4d75f333e852cd415f0db 64 PANTHER PTHR37532 1 64 7.3E-23 T 22-04-2016 RPIC_RS08445 6ad8a7261ef89556dbc2763afcbf9db0 128 SUPERFAMILY SSF81296 25 128 7.7E-31 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS08445 6ad8a7261ef89556dbc2763afcbf9db0 128 Pfam PF04234 CopC domain 26 127 8.7E-24 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 RPIC_RS08445 6ad8a7261ef89556dbc2763afcbf9db0 128 Gene3D G3DSA:2.60.40.1220 25 128 2.8E-30 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 Gene3D G3DSA:3.40.250.10 102 229 2.8E-27 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 PANTHER PTHR22778:SF21 2 273 1.7E-68 T 22-04-2016 RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 SUPERFAMILY SSF52821 106 240 9.69E-24 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 257 37.897 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 SMART SM00450 118 219 1.4E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 Pfam PF00581 Rhodanese-like domain 120 213 6.4E-5 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11845 5783e19b41cbf1e60e1ec989d358f11d 282 PANTHER PTHR22778 2 273 1.7E-68 T 22-04-2016 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 PANTHER PTHR23508:SF14 11 430 7.5E-262 T 22-04-2016 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 SUPERFAMILY SSF103473 17 423 9.55E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 Gene3D G3DSA:1.20.1250.20 17 222 2.3E-23 T 22-04-2016 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 Gene3D G3DSA:1.20.1250.20 240 422 1.5E-18 T 22-04-2016 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 Pfam PF07690 Major Facilitator Superfamily 23 376 1.4E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 PANTHER PTHR23508 11 430 7.5E-262 T 22-04-2016 RPIC_RS02665 05bc5cbd5cbf6c3d0947453c9171e0a4 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 257 843 1.2E-131 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 ProSitePatterns PS01047 Heavy-metal-associated domain. 127 156 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Pfam PF00122 E1-E2 ATPase 308 527 5.9E-50 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 32 116 1.8E-19 T 22-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF81653 349 437 1.05E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Pfam PF00702 haloacid dehalogenase-like hydrolase 535 754 1.7E-31 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 653 818 1.6E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 311 569 3.5E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF56784 623 840 1.69E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF56784 535 554 1.69E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF81665 790 819 1.26E-13 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF81665 439 530 1.26E-13 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF81665 201 278 1.26E-13 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PANTHER PTHR24093 107 845 1.3E-159 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 538 544 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 275 843 2.1E-143 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PANTHER PTHR24093:SF50 107 845 1.3E-159 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Pfam PF00403 Heavy-metal-associated domain 125 185 6.7E-12 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 741 760 1.0E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 677 1.0E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 550 1.0E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 388 402 1.0E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 764 776 1.0E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 698 1.0E-19 T 22-04-2016 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Gene3D G3DSA:3.40.50.1000 661 809 5.5E-46 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Gene3D G3DSA:3.40.50.1000 509 552 5.5E-46 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Gene3D G3DSA:2.70.150.10 287 439 7.3E-20 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 SUPERFAMILY SSF55008 118 190 1.7E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS05480 eb15ce4a3ab374d9c593639cc6c64182 847 Gene3D G3DSA:3.30.70.100 121 188 2.1E-20 T 22-04-2016 RPIC_RS06925 ef585721787bf08bae57660841f3104e 382 SUPERFAMILY SSF52540 3 120 2.85E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06925 ef585721787bf08bae57660841f3104e 382 Pfam PF05707 Zonular occludens toxin (Zot) 47 170 2.9E-20 T 22-04-2016 IPR008900 Zona occludens toxin RPIC_RS06925 ef585721787bf08bae57660841f3104e 382 Gene3D G3DSA:3.40.50.300 1 171 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 SUPERFAMILY SSF52540 92 238 6.15E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 Gene3D G3DSA:1.20.1560.10 14 123 2.6E-10 T 22-04-2016 RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 Pfam PF00005 ABC transporter 174 214 2.1E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 Pfam PF06472 ABC transporter transmembrane region 2 1 76 1.8E-15 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 SUPERFAMILY SSF90123 9 123 2.09E-13 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 Gene3D G3DSA:3.40.50.300 151 248 2.9E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 PANTHER PTHR11384 1 255 1.9E-77 T 22-04-2016 RPIC_RS20185 b864343d641a9e2cf05dddc8cba4516a 255 PANTHER PTHR11384:SF3 1 255 1.9E-77 T 22-04-2016 RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 23 202 5.8E-49 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 SUPERFAMILY SSF46785 708 773 3.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 PANTHER PTHR22683 214 774 1.2E-258 T 22-04-2016 RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 Gene3D G3DSA:3.40.50.300 361 664 1.8E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 SUPERFAMILY SSF52540 364 668 8.36E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 PANTHER PTHR22683:SF41 214 774 1.2E-258 T 22-04-2016 RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 SMART SM00843 708 773 1.5E-37 T 22-04-2016 IPR018541 FtsK gamma domain RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 Pfam PF09397 Ftsk gamma domain 710 770 4.4E-26 T 22-04-2016 IPR018541 FtsK gamma domain RPIC_RS12585 a5ad806c52bfcb0b70893197cdc182af 781 Pfam PF01580 FtsK/SpoIIIE family 388 597 3.2E-62 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 Pfam PF00005 ABC transporter 18 165 3.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 SUPERFAMILY SSF52540 1 226 2.84E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 PIRSF PIRSF039085 1 243 6.2E-100 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 PANTHER PTHR24220 3 244 1.7E-178 T 22-04-2016 RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 SMART SM00382 26 213 2.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 PANTHER PTHR24220:SF317 3 244 1.7E-178 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01765 cd03d48700f7c299912ef6bb4aa9d38c 244 Gene3D G3DSA:3.40.50.300 1 226 3.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PANTHER PTHR22888:SF2 38 311 2.9E-97 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 SUPERFAMILY SSF46626 237 372 5.42E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 37 117 6.7E-14 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 SUPERFAMILY SSF49503 129 272 6.64E-52 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 203 251 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 222 239 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 128 147 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 240 257 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 94 106 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 202 222 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 178 199 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PRINTS PR01166 Cytochrome c oxidase subunit II signature 106 126 7.3E-39 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 PANTHER PTHR22888 38 311 2.9E-97 T 22-04-2016 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 Gene3D G3DSA:1.10.287.90 37 123 1.5E-25 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 Gene3D G3DSA:2.60.40.420 124 298 3.3E-57 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 132 256 5.6E-38 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 292 361 3.2E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 SUPERFAMILY SSF81464 33 126 5.56E-27 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 Gene3D G3DSA:1.10.760.10 299 376 4.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS01060 86d0c090606e92e25995d6084b044aa1 418 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 45 267 3.6E-60 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 Gene3D G3DSA:3.40.50.970 347 553 5.1E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 328 3.1E-25 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 PANTHER PTHR18968 1 568 4.8E-233 T 22-04-2016 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 SUPERFAMILY SSF52518 365 565 7.33E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 543 1.0E-25 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 PANTHER PTHR18968:SF124 1 568 4.8E-233 T 22-04-2016 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 Gene3D G3DSA:3.40.50.1220 193 346 1.7E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 173 2.9E-49 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 Gene3D G3DSA:3.40.50.970 2 176 1.3E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 SUPERFAMILY SSF52518 3 175 1.0E-46 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RPIC_RS00325 f6b53b4dfe5c5dbda2b990af31ef706b 596 SUPERFAMILY SSF52467 189 357 8.44E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:2.20.25.90 52 98 9.9E-32 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1128 1155 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:3.40.228.10 217 335 9.3E-77 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:3.40.228.10 486 596 9.3E-77 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615 854 879 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615 34 412 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615 998 1232 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615 699 838 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.5E-16 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1238 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:3.40.50.740 597 781 5.1E-65 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Pfam PF00384 Molybdopterin oxidoreductase 108 835 1.0E-156 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:3.90.55.10 782 838 1.1E-6 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 SMART SM00926 43 105 2.6E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Pfam PF01568 Molydopterin dinucleotide binding domain 1090 1205 1.6E-21 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:3.40.50.740 108 203 1.6E-5 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:2.40.40.20 1058 1237 1.7E-41 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 SUPERFAMILY SSF50692 1085 1238 1.97E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 Gene3D G3DSA:4.10.1200.10 1 25 2.4E-8 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615:SF165 854 879 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615:SF165 34 412 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615:SF165 998 1232 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 PANTHER PTHR11615:SF165 699 838 0.0 T 22-04-2016 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 779 796 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RPIC_RS12420 3113a960dc53f1757c41e3ea77b44bb3 1251 SUPERFAMILY SSF53706 3 1071 0.0 T 22-04-2016 RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 PANTHER PTHR23501:SF56 26 403 8.4E-86 T 22-04-2016 RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 PANTHER PTHR23501 26 403 8.4E-86 T 22-04-2016 RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 Gene3D G3DSA:1.20.1250.20 24 197 4.3E-15 T 22-04-2016 RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 Pfam PF07690 Major Facilitator Superfamily 230 406 2.1E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 Pfam PF07690 Major Facilitator Superfamily 31 203 3.7E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 SUPERFAMILY SSF103473 21 404 8.63E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS16310 af0c551abe7a8c25fc350cec0bde29fa 419 Gene3D G3DSA:1.20.1250.20 232 404 1.8E-9 T 22-04-2016 RPIC_RS06885 08bc12e93714e7dbff7300dc9e3b603f 88 Pfam PF05356 Phage Coat protein B 23 87 1.9E-9 T 22-04-2016 IPR008020 Capsid protein G8P GO:0019028 RPIC_RS06885 08bc12e93714e7dbff7300dc9e3b603f 88 SUPERFAMILY SSF57987 43 87 1.37E-7 T 22-04-2016 RPIC_RS06885 08bc12e93714e7dbff7300dc9e3b603f 88 Gene3D G3DSA:1.20.5.230 44 87 4.5E-9 T 22-04-2016 RPIC_RS18060 04ad10e2c2796c20bcdac1345b5e20f3 381 SUPERFAMILY SSF51905 5 270 2.85E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18060 04ad10e2c2796c20bcdac1345b5e20f3 381 Gene3D G3DSA:3.50.50.60 134 185 4.4E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18060 04ad10e2c2796c20bcdac1345b5e20f3 381 Gene3D G3DSA:3.50.50.60 6 89 4.4E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18060 04ad10e2c2796c20bcdac1345b5e20f3 381 Pfam PF01266 FAD dependent oxidoreductase 8 343 3.3E-37 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS18060 04ad10e2c2796c20bcdac1345b5e20f3 381 Gene3D G3DSA:3.30.9.10 186 309 2.5E-16 T 22-04-2016 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 SUPERFAMILY SSF111352 82 494 2.88E-125 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 ProSitePatterns PS01219 Ammonium transporters signature. 261 286 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 PANTHER PTHR11730:SF17 252 514 7.7E-178 T 22-04-2016 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 PANTHER PTHR11730:SF17 60 233 7.7E-178 T 22-04-2016 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 TIGRFAM TIGR00836 amt: ammonium transporter 85 513 2.6E-134 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 PANTHER PTHR11730 252 514 7.7E-178 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 PANTHER PTHR11730 60 233 7.7E-178 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 Gene3D G3DSA:1.10.3430.10 79 494 9.7E-142 T 22-04-2016 IPR029020 Ammonium/urea transporter RPIC_RS00965 3f418fe0b13e0670ccc99b1420fdcf27 515 Pfam PF00909 Ammonium Transporter Family 87 513 3.8E-122 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 PANTHER PTHR10824:SF4 6 450 5.7E-67 T 22-04-2016 RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 SUPERFAMILY SSF53474 290 387 2.94E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 SUPERFAMILY SSF53474 64 257 2.94E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 SUPERFAMILY SSF53474 416 427 2.94E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 Gene3D G3DSA:1.20.1290.10 495 608 1.7E-14 T 22-04-2016 IPR029032 AhpD-like RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 202 431 4.1E-59 T 22-04-2016 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 PANTHER PTHR10824 6 450 5.7E-67 T 22-04-2016 RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 16 136 5.4E-33 T 22-04-2016 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 SUPERFAMILY SSF69118 466 608 2.27E-18 T 22-04-2016 IPR029032 AhpD-like RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 Gene3D G3DSA:3.40.50.1820 137 259 1.5E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10270 14580cb9b17aae60e04ee8598c149e0d 626 Gene3D G3DSA:3.40.50.1820 325 427 1.5E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 Pfam PF13660 Domain of unknown function (DUF4147) 25 247 3.7E-81 T 22-04-2016 IPR025286 MOFRL-associated domain RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 SUPERFAMILY SSF82544 20 437 1.57E-153 T 22-04-2016 RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 Gene3D G3DSA:3.40.50.10180 24 257 1.9E-98 T 22-04-2016 RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 PANTHER PTHR12227:SF0 2 437 1.3E-146 T 22-04-2016 RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 Gene3D G3DSA:3.40.1480.10 258 438 9.7E-74 T 22-04-2016 IPR007835 MOFRL domain RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 Pfam PF05161 MOFRL family 326 431 1.5E-37 T 22-04-2016 IPR007835 MOFRL domain RPIC_RS17250 02052859fdf256807b3a43c4bd93dc1a 439 PANTHER PTHR12227 2 437 1.3E-146 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 Gene3D G3DSA:2.40.50.100 202 234 2.7E-7 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 Gene3D G3DSA:2.40.50.100 43 75 2.7E-7 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 Pfam PF13437 HlyD family secretion protein 206 316 2.9E-15 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 SUPERFAMILY SSF111369 41 123 4.45E-6 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 PANTHER PTHR32347:SF15 20 323 3.7E-64 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 Pfam PF13533 Biotin-lipoyl like 43 90 6.1E-8 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 PANTHER PTHR32347 20 323 3.7E-64 T 22-04-2016 RPIC_RS00260 97ef1f8ed2445ed1a74d600b0e438163 324 SUPERFAMILY SSF111369 142 261 2.48E-6 T 22-04-2016 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 Hamap MF_00082_A Acetylglutamate kinase [argB]. 42 292 29.063 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 TIGRFAM TIGR00761 argB: acetylglutamate kinase 42 282 1.6E-75 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 Gene3D G3DSA:3.40.1160.10 39 306 6.1E-103 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 Hamap MF_00082_B Acetylglutamate kinase [argB]. 39 307 35.864 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 Pfam PF00696 Amino acid kinase family 41 284 1.4E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 PANTHER PTHR23342 24 306 3.7E-109 T 22-04-2016 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 PIRSF PIRSF000728 26 307 7.5E-104 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 PRINTS PR00474 Glutamate 5-kinase family signature 257 277 3.3E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 PRINTS PR00474 Glutamate 5-kinase family signature 72 86 3.3E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 PRINTS PR00474 Glutamate 5-kinase family signature 207 234 3.3E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 RPIC_RS18440 23fca5dbc89875fd692d21f24c788bc2 308 SUPERFAMILY SSF53633 24 307 4.19E-89 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Gene3D G3DSA:3.40.50.10490 446 612 4.1E-64 T 22-04-2016 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 612 2.2E-246 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 PANTHER PTHR10937:SF0 1 612 1.0E-304 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 PANTHER PTHR10937 1 612 1.0E-304 T 22-04-2016 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 SUPERFAMILY SSF56235 2 238 1.8E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Gene3D G3DSA:3.40.50.10490 249 445 7.1E-71 T 22-04-2016 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 SUPERFAMILY SSF53697 250 612 8.72E-110 T 22-04-2016 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Pfam PF13522 Glutamine amidotransferase domain 57 197 5.6E-22 T 22-04-2016 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 612 38.838 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Gene3D G3DSA:3.60.20.10 2 240 3.7E-72 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Pfam PF01380 SIS domain 294 420 1.5E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC_RS00295 4f7572c329db05ae96b883ea74477389 612 Pfam PF01380 SIS domain 465 594 3.0E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC_RS09110 0fdc642cdcd50f0624b54350df7e4bb2 189 SUPERFAMILY SSF46785 42 179 6.39E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09110 0fdc642cdcd50f0624b54350df7e4bb2 189 Pfam PF13463 Winged helix DNA-binding domain 71 136 5.1E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS09110 0fdc642cdcd50f0624b54350df7e4bb2 189 Gene3D G3DSA:1.10.10.10 44 176 3.0E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09110 0fdc642cdcd50f0624b54350df7e4bb2 189 PIRSF PIRSF036158 1 189 2.0E-84 T 22-04-2016 IPR014601 Transcriptional regulator with MarR-type HTH domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Gene3D G3DSA:3.30.1490.20 130 201 2.2E-15 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Gene3D G3DSA:3.90.226.10 848 1091 4.0E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 327 2.3E-59 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Gene3D G3DSA:2.40.50.100 494 566 1.7E-22 T 22-04-2016 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 PANTHER PTHR18866 1 564 5.4E-214 T 22-04-2016 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Gene3D G3DSA:3.40.50.20 3 129 1.0E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SUPERFAMILY SSF52440 2 112 2.66E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Pfam PF01039 Carboxyl transferase domain 610 1077 1.2E-74 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 110 1.3E-38 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SUPERFAMILY SSF51246 337 456 1.41E-28 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SMART SM00878 343 453 4.9E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Pfam PF00364 Biotin-requiring enzyme 497 562 1.3E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Pfam PF02785 Biotin carboxylase C-terminal domain 343 453 5.2E-28 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Gene3D G3DSA:3.90.226.10 599 838 3.1E-44 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SUPERFAMILY SSF52096 848 1099 1.59E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 Gene3D G3DSA:3.30.470.20 206 457 1.9E-79 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SUPERFAMILY SSF51230 489 562 1.31E-19 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SUPERFAMILY SSF52096 587 842 3.37E-53 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 SUPERFAMILY SSF56059 83 334 3.71E-58 T 22-04-2016 RPIC_RS11890 465ce88611f605ef22844c147f3e98c9 1103 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 519 536 - T 22-04-2016 IPR001882 Biotin-binding site RPIC_RS04930 ddbff4b8810c9b1d97b072ab5081ac11 234 Pfam PF03475 3-alpha domain 176 218 2.1E-14 T 22-04-2016 IPR005163 3-alpha domain RPIC_RS04930 ddbff4b8810c9b1d97b072ab5081ac11 234 PANTHER PTHR30212:SF2 26 229 6.1E-79 T 22-04-2016 RPIC_RS04930 ddbff4b8810c9b1d97b072ab5081ac11 234 PANTHER PTHR30212 26 229 6.1E-79 T 22-04-2016 RPIC_RS04930 ddbff4b8810c9b1d97b072ab5081ac11 234 Pfam PF03473 MOSC domain 52 166 1.7E-27 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RPIC_RS04930 ddbff4b8810c9b1d97b072ab5081ac11 234 SUPERFAMILY SSF50800 8 230 6.8E-75 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RPIC_RS04930 ddbff4b8810c9b1d97b072ab5081ac11 234 Gene3D G3DSA:2.40.33.20 8 230 1.1E-90 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 PANTHER PTHR30126:SF3 8 309 5.3E-50 T 22-04-2016 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 Gene3D G3DSA:3.40.190.10 99 203 2.6E-23 T 22-04-2016 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 Pfam PF03466 LysR substrate binding domain 95 305 6.7E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 Gene3D G3DSA:1.10.10.10 9 94 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 SUPERFAMILY SSF46785 8 117 7.89E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 9.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 PANTHER PTHR30126 8 309 5.3E-50 T 22-04-2016 RPIC_RS06970 7f162c51944e12ff4a0fa2d010470423 312 SUPERFAMILY SSF53850 99 310 4.95E-29 T 22-04-2016 RPIC_RS07485 0d8d732e1fb88692220cb3ce63f956be 100 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 80 6.7E-20 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RPIC_RS07485 0d8d732e1fb88692220cb3ce63f956be 100 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 37 82 1.0E-4 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RPIC_RS07485 0d8d732e1fb88692220cb3ce63f956be 100 SUPERFAMILY SSF63592 1 80 2.62E-18 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RPIC_RS07485 0d8d732e1fb88692220cb3ce63f956be 100 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 99 18.534 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 RPIC_RS07255 6880fd9d02f3fa68f9c9864fe84852e5 180 SUPERFAMILY SSF56935 1 180 1.13E-33 T 22-04-2016 RPIC_RS07255 6880fd9d02f3fa68f9c9864fe84852e5 180 Gene3D G3DSA:2.40.160.10 1 180 3.7E-37 T 22-04-2016 IPR023614 Porin domain RPIC_RS07255 6880fd9d02f3fa68f9c9864fe84852e5 180 Pfam PF13609 Gram-negative porin 7 152 9.2E-19 T 22-04-2016 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Gene3D G3DSA:3.30.300.10 246 385 3.1E-68 T 22-04-2016 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 PIRSF PIRSF000497 1 386 5.1E-171 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 373 7.6E-68 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 385 56.282 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.2E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 1.1E-181 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Gene3D G3DSA:3.30.300.10 12 135 2.3E-46 T 22-04-2016 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 118 233 1.0E-46 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 Gene3D G3DSA:3.30.300.10 136 235 9.6E-44 T 22-04-2016 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 SUPERFAMILY SSF55973 113 234 2.86E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 SUPERFAMILY SSF55973 4 110 1.65E-45 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 PANTHER PTHR11964 5 380 3.4E-262 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS00165 04db3105c42718d76f356913f53f08f8 396 SUPERFAMILY SSF55973 235 386 1.74E-67 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 RPIC_RS12460 7ad69203f91e16d620f25997533d0881 70 Pfam PF11994 Protein of unknown function (DUF3489) 5 61 4.1E-20 T 22-04-2016 IPR021880 Protein of unknown function DUF3489 RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 200 1.0E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 PANTHER PTHR11260 1 213 8.5E-95 T 22-04-2016 RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 75 2.9E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 213 2.3E-85 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 Gene3D G3DSA:1.20.1050.10 92 213 2.8E-53 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 Gene3D G3DSA:3.40.30.10 3 91 1.6E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 SUPERFAMILY SSF52833 2 85 2.29E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 SUPERFAMILY SSF47616 83 213 4.59E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS01165 a3716d89b8ba0c25b8476b30a2a34e13 216 PANTHER PTHR11260:SF289 1 213 8.5E-95 T 22-04-2016 RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 Pfam PF03167 Uracil DNA glycosylase superfamily 105 251 8.0E-47 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 SUPERFAMILY SSF52141 80 258 7.19E-62 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 SMART SM00986 105 252 6.3E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 Gene3D G3DSA:3.40.470.10 80 260 1.5E-71 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 SMART SM00987 105 252 6.3E-42 T 22-04-2016 RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 91 252 1.7E-63 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 PANTHER PTHR33693:SF1 80 251 2.7E-71 T 22-04-2016 RPIC_RS06170 a238aa38f261c6ccbe0dd2d1f1e745c8 264 PANTHER PTHR33693 80 251 2.7E-71 T 22-04-2016 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 PANTHER PTHR22726:SF10 88 421 6.0E-67 T 22-04-2016 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 PANTHER PTHR22726 88 421 6.0E-67 T 22-04-2016 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 Gene3D G3DSA:1.25.40.10 231 254 6.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 Gene3D G3DSA:1.25.40.10 377 532 6.3E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 SUPERFAMILY SSF48452 379 504 1.44E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 Gene3D G3DSA:3.30.2010.10 124 212 6.5E-17 T 22-04-2016 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 Pfam PF01435 Peptidase family M48 148 324 6.0E-29 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC_RS02365 acf93c54e10c0247c6ad09ad867ea282 569 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 26 561 31.625 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 Gene3D G3DSA:3.40.50.300 34 278 3.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 Pfam PF00005 ABC transporter 51 210 2.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 35 283 2.3E-105 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 261 282 2.6E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 PANTHER PTHR24220 37 283 1.6E-110 T 22-04-2016 RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 PANTHER PTHR24220:SF366 37 283 1.6E-110 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 ProSitePatterns PS00211 ABC transporters family signature. 182 196 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS10765 d5e9efe3414a49507ab0dad950e1bdd1 283 SUPERFAMILY SSF52540 35 280 3.29E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 4.1E-36 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 9.2E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 SUPERFAMILY SSF52540 151 341 3.38E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 Pfam PF01018 GTP1/OBG 3 158 4.2E-59 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 Gene3D G3DSA:3.40.50.300 160 343 1.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.334 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PANTHER PTHR11702:SF3 1 349 1.5E-164 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PIRSF PIRSF002401 1 362 3.9E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 Gene3D G3DSA:2.70.210.12 2 156 9.6E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 PANTHER PTHR11702 1 349 1.5E-164 T 22-04-2016 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 Pfam PF01926 50S ribosome-binding GTPase 161 285 5.1E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS15100 00b5539171b7e6f41b3b860b09695bbc 364 SUPERFAMILY SSF82051 2 158 1.96E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.901 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 2.9E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 SUPERFAMILY SSF52374 3 156 1.25E-45 T 22-04-2016 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 Gene3D G3DSA:3.40.50.620 2 157 2.2E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PANTHER PTHR21342 1 156 6.8E-75 T 22-04-2016 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 Pfam PF01467 Cytidylyltransferase-like 5 133 1.5E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.3E-48 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 2.1E-56 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 RPIC_RS01190 0c559b4e9707e67a9b49e97681954028 167 PANTHER PTHR21342:SF1 1 156 6.8E-75 T 22-04-2016 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 PANTHER PTHR11019 1 240 7.1E-37 T 22-04-2016 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 SUPERFAMILY SSF46689 192 240 2.73E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 SMART SM00342 156 239 4.5E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 SUPERFAMILY SSF46689 139 189 1.25E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 Pfam PF12833 Helix-turn-helix domain 162 240 6.1E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 PANTHER PTHR11019:SF39 1 240 7.1E-37 T 22-04-2016 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 SUPERFAMILY SSF51182 11 90 8.26E-9 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 Gene3D G3DSA:1.10.10.60 194 240 3.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 Gene3D G3DSA:2.60.120.10 10 68 4.7E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS00400 c07c876cd26f79941ad138614c0da90c 240 Gene3D G3DSA:1.10.10.60 138 193 1.1E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 PANTHER PTHR11601:SF45 1 416 1.7E-158 T 22-04-2016 RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 Gene3D G3DSA:3.40.640.10 20 255 1.7E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 Gene3D G3DSA:3.90.190.10 386 483 9.9E-38 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 PANTHER PTHR11601 1 416 1.7E-158 T 22-04-2016 RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 Pfam PF04273 Putative phosphatase (DUF442) 388 484 1.0E-25 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 Gene3D G3DSA:3.90.1150.10 256 374 2.1E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 Pfam PF00266 Aminotransferase class-V 9 368 7.7E-76 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC_RS09850 1cdde8d5a99ab5036296b353710aa52f 492 SUPERFAMILY SSF53383 6 381 1.01E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS10695 b63aeac212ca2b4a840c41164528ecb4 145 PANTHER PTHR21660 39 141 7.4E-13 T 22-04-2016 RPIC_RS10695 b63aeac212ca2b4a840c41164528ecb4 145 Pfam PF03061 Thioesterase superfamily 53 129 1.0E-12 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS10695 b63aeac212ca2b4a840c41164528ecb4 145 Gene3D G3DSA:3.10.129.10 1 142 1.2E-48 T 22-04-2016 IPR029069 HotDog domain RPIC_RS10695 b63aeac212ca2b4a840c41164528ecb4 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 23 136 3.6E-10 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC_RS10695 b63aeac212ca2b4a840c41164528ecb4 145 SUPERFAMILY SSF54637 10 139 1.53E-22 T 22-04-2016 IPR029069 HotDog domain RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 SUPERFAMILY SSF53706 37 712 7.85E-196 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 64 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 SMART SM00926 41 95 9.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 1.3E-17 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Pfam PF00384 Molybdopterin oxidoreductase 98 578 1.2E-97 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Hamap MF_01630 Nitrate reductase [napA]. 1 838 29.367 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:2.40.40.20 677 838 1.2E-45 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 PANTHER PTHR11615 40 288 0.0 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 PANTHER PTHR11615 354 606 0.0 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 PANTHER PTHR11615 653 838 0.0 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:3.40.228.10 181 293 9.3E-48 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:3.40.228.10 328 407 9.3E-48 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:2.20.25.90 38 97 8.1E-21 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 SUPERFAMILY SSF50692 698 838 2.15E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 PANTHER PTHR11615:SF123 40 288 0.0 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 PANTHER PTHR11615:SF123 354 606 0.0 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 PANTHER PTHR11615:SF123 653 838 0.0 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 838 0.0 T 22-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:3.40.50.740 98 180 6.3E-79 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:3.40.50.740 631 674 6.3E-79 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Gene3D G3DSA:3.40.50.740 408 585 6.3E-79 T 22-04-2016 RPIC_RS14010 161910614e9e4b373ae50930eb2d71fe 838 Pfam PF01568 Molydopterin dinucleotide binding domain 724 832 1.4E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 SUPERFAMILY SSF50156 245 369 1.97E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 SUPERFAMILY SSF50494 43 279 2.08E-68 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Pfam PF13180 PDZ domain 288 378 1.9E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Pfam PF13180 PDZ domain 410 491 1.6E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Gene3D G3DSA:2.30.42.10 289 385 1.2E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Gene3D G3DSA:2.30.42.10 409 497 2.9E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PRINTS PR00834 HtrA/DegQ protease family signature 187 211 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PRINTS PR00834 HtrA/DegQ protease family signature 327 339 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.2E-51 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PANTHER PTHR22939 43 67 2.0E-123 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PANTHER PTHR22939 99 382 2.0E-123 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Gene3D G3DSA:2.40.10.10 45 178 1.2E-39 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Pfam PF13365 Trypsin-like peptidase domain 117 248 9.2E-35 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 Gene3D G3DSA:2.40.10.10 179 288 3.2E-44 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 SMART SM00228 407 485 2.5E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 SMART SM00228 287 369 1.9E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 SUPERFAMILY SSF50156 407 495 1.45E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PANTHER PTHR22939:SF98 43 67 2.0E-123 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 PANTHER PTHR22939:SF98 99 382 2.0E-123 T 22-04-2016 RPIC_RS04540 d04163797ba6517ab9fae1a058372f86 503 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 45 491 1.7E-159 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RPIC_RS01655 58636780bbce90e4c9ba417d5d43301a 479 Pfam PF00474 Sodium:solute symporter family 30 426 2.2E-36 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS01655 58636780bbce90e4c9ba417d5d43301a 479 PANTHER PTHR11819:SF141 1 461 1.1E-100 T 22-04-2016 RPIC_RS01655 58636780bbce90e4c9ba417d5d43301a 479 PANTHER PTHR11819 1 461 1.1E-100 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 SMART SM00363 422 479 5.5E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 Pfam PF01479 S4 domain 422 468 1.7E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 SUPERFAMILY SSF55120 482 672 2.24E-32 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 SUPERFAMILY SSF55174 422 512 1.57E-15 T 22-04-2016 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 Gene3D G3DSA:3.10.290.10 422 480 5.7E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 PANTHER PTHR21600:SF25 298 668 3.5E-62 T 22-04-2016 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 Pfam PF00849 RNA pseudouridylate synthase 484 639 3.5E-11 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 PANTHER PTHR21600 298 668 3.5E-62 T 22-04-2016 RPIC_RS06335 c934c700b0539f8dfe09dffee8702a62 674 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 527 668 2.9E-32 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC_RS11560 e398a60c06f1901d144baa889a8f776d 543 SUPERFAMILY SSF52980 1 151 3.43E-12 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC_RS11560 e398a60c06f1901d144baa889a8f776d 543 Gene3D G3DSA:3.90.320.10 1 206 2.8E-11 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RPIC_RS11560 e398a60c06f1901d144baa889a8f776d 543 PIRSF PIRSF028503 1 542 1.6E-137 T 22-04-2016 IPR016889 Uncharacterised conserved protein UCP028503 RPIC_RS11560 e398a60c06f1901d144baa889a8f776d 543 Pfam PF09588 YqaJ-like viral recombinase domain 12 154 1.4E-5 T 22-04-2016 IPR019080 YqaJ viral recombinase RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 SUPERFAMILY SSF69118 13 191 1.13E-46 T 22-04-2016 IPR029032 AhpD-like RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 Pfam PF02627 Carboxymuconolactone decarboxylase family 57 134 9.1E-14 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 Gene3D G3DSA:1.20.1290.10 154 191 3.6E-38 T 22-04-2016 IPR029032 AhpD-like RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 Gene3D G3DSA:1.20.1290.10 5 102 3.6E-38 T 22-04-2016 IPR029032 AhpD-like RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 PANTHER PTHR35446 8 190 2.7E-39 T 22-04-2016 RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 19 194 1.4E-68 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 75 104 7.2E-10 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS10275 b6055a284e49cd805657817fc3799a86 196 PANTHER PTHR35446:SF2 8 190 2.7E-39 T 22-04-2016 RPIC_RS10225 c32dd8419b33a9fee1449cd9b6987d1b 205 Pfam PF04366 Las17-binding protein actin regulator 118 204 8.1E-14 T 22-04-2016 IPR007461 Ysc84 actin-binding domain RPIC_RS05390 61a4d10898283742e413f57b85dc00ba 272 SMART SM00852 4 177 8.7E-32 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05390 61a4d10898283742e413f57b85dc00ba 272 SUPERFAMILY SSF53218 2 211 4.58E-38 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05390 61a4d10898283742e413f57b85dc00ba 272 PANTHER PTHR13939 1 220 2.7E-33 T 22-04-2016 RPIC_RS05390 61a4d10898283742e413f57b85dc00ba 272 Pfam PF00994 Probable molybdopterin binding domain 4 170 4.9E-28 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05390 61a4d10898283742e413f57b85dc00ba 272 Gene3D G3DSA:3.40.980.10 2 174 3.2E-31 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 SUPERFAMILY SSF47203 288 474 4.03E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 PANTHER PTHR10909 3 477 6.8E-227 T 22-04-2016 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 1.2E-12 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 SUPERFAMILY SSF56645 38 281 4.19E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 9.0E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Gene3D G3DSA:1.20.140.10 270 467 5.1E-53 T 22-04-2016 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 9.9E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Gene3D G3DSA:1.10.540.10 39 160 2.9E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Gene3D G3DSA:2.40.110.10 162 269 1.5E-26 T 22-04-2016 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 PANTHER PTHR10909:SF296 3 477 6.8E-227 T 22-04-2016 RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 470 590 2.0E-33 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC_RS01705 89a8415335032684900d6d77d21cfc6a 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 3.0E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 Pfam PF13284 Domain of unknown function (DUF4072) 3 52 4.3E-12 T 22-04-2016 IPR025138 Domain of unknown function DUF4072 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 76 280 8.9E-65 T 22-04-2016 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 PANTHER PTHR10000:SF7 76 279 4.0E-74 T 22-04-2016 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 PANTHER PTHR10000 76 279 4.0E-74 T 22-04-2016 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 Pfam PF12710 haloacid dehalogenase-like hydrolase 80 247 2.6E-17 T 22-04-2016 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 78 247 2.8E-27 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 Gene3D G3DSA:3.40.50.1000 139 269 2.1E-39 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 SUPERFAMILY SSF56784 75 282 2.98E-45 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS09350 0a50e821c0d248afc6aa9f7c4f61a7e7 285 Gene3D G3DSA:1.10.150.210 87 138 4.9E-25 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 Gene3D G3DSA:1.25.40.10 385 615 1.4E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SUPERFAMILY SSF48452 328 444 7.97E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 Gene3D G3DSA:1.25.40.10 168 384 7.5E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 Pfam PF13432 Tetratricopeptide repeat 464 521 0.0031 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 Pfam PF13432 Tetratricopeptide repeat 335 400 0.0083 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 Pfam PF13432 Tetratricopeptide repeat 270 331 0.0065 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 Pfam PF13432 Tetratricopeptide repeat 538 590 0.01 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SUPERFAMILY SSF48452 464 624 1.9E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 PANTHER PTHR23083 119 159 2.8E-34 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 PANTHER PTHR23083 406 632 2.8E-34 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 PANTHER PTHR23083 196 360 2.8E-34 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SMART SM00028 331 364 200.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SMART SM00028 297 330 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SMART SM00028 488 521 34.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SMART SM00028 522 556 92.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SMART SM00028 590 623 35.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SMART SM00028 230 263 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 PANTHER PTHR23083:SF195 119 159 2.8E-34 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 PANTHER PTHR23083:SF195 406 632 2.8E-34 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 PANTHER PTHR23083:SF195 196 360 2.8E-34 T 22-04-2016 RPIC_RS01235 1d741c14ad35a8da8563e0c717108756 645 SUPERFAMILY SSF48452 197 359 7.27E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 SUPERFAMILY SSF53901 4 252 5.76E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 Gene3D G3DSA:3.40.47.10 3 258 2.6E-83 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 PIRSF PIRSF000447 1 410 6.7E-185 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.0E-61 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 PANTHER PTHR11712 3 410 4.4E-213 T 22-04-2016 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 SMART SM00825 Beta-ketoacyl synthase 6 410 9.5E-17 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 408 4.7E-197 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 367 1.6E-36 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 SUPERFAMILY SSF53901 215 409 6.53E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS04520 923770b248d51a042c3121110b147d1b 410 Gene3D G3DSA:3.40.47.10 263 409 6.7E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Gene3D G3DSA:1.10.3850.10 816 1028 4.5E-56 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Gene3D G3DSA:1.10.3850.10 281 499 4.9E-63 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82714 183 272 1.26E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82866 299 498 3.14E-51 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Gene3D G3DSA:3.30.2090.10 182 275 4.3E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PANTHER PTHR32063:SF13 1 1038 0.0 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Gene3D G3DSA:3.30.70.1430 38 140 3.7E-32 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82693 136 183 4.19E-26 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82693 275 331 4.19E-26 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82866 808 1029 7.85E-43 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82714 723 807 4.19E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82693 567 671 1.07E-30 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Gene3D G3DSA:3.30.70.1430 569 671 7.7E-36 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 Gene3D G3DSA:3.30.2090.10 722 807 2.3E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 8.5E-105 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 PANTHER PTHR32063 1 1038 0.0 T 22-04-2016 RPIC_RS18580 3869e0de7b0e7d44f8d9f6c4a92c8928 1050 SUPERFAMILY SSF82693 38 132 7.32E-24 T 22-04-2016 RPIC_RS13015 d3e4499a93bf1dd901a0c44b5444198a 672 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 112 558 2.3E-102 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 RPIC_RS13015 d3e4499a93bf1dd901a0c44b5444198a 672 PANTHER PTHR37937 9 570 3.2E-104 T 22-04-2016 RPIC_RS13015 d3e4499a93bf1dd901a0c44b5444198a 672 PANTHER PTHR37937:SF1 9 570 3.2E-104 T 22-04-2016 RPIC_RS13015 d3e4499a93bf1dd901a0c44b5444198a 672 Gene3D G3DSA:3.40.50.300 347 552 2.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13015 d3e4499a93bf1dd901a0c44b5444198a 672 Gene3D G3DSA:3.40.50.300 105 209 2.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13015 d3e4499a93bf1dd901a0c44b5444198a 672 SUPERFAMILY SSF52540 106 554 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01185 758111e5db90e430419b31dc5b6ee9a2 218 PANTHER PTHR18895:SF60 23 171 6.3E-31 T 22-04-2016 RPIC_RS01185 758111e5db90e430419b31dc5b6ee9a2 218 Gene3D G3DSA:3.40.50.150 19 216 8.6E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01185 758111e5db90e430419b31dc5b6ee9a2 218 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 21 174 6.0E-36 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS01185 758111e5db90e430419b31dc5b6ee9a2 218 PANTHER PTHR18895 23 171 6.3E-31 T 22-04-2016 RPIC_RS01185 758111e5db90e430419b31dc5b6ee9a2 218 Pfam PF03602 Conserved hypothetical protein 95 26 174 1.2E-42 T 22-04-2016 RPIC_RS01185 758111e5db90e430419b31dc5b6ee9a2 218 SUPERFAMILY SSF53335 25 201 6.49E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 SMART SM01382 125 253 1.8E-87 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 Gene3D G3DSA:2.40.50.140 1 115 2.5E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 9.7E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 Gene3D G3DSA:2.30.30.30 120 196 5.0E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 SUPERFAMILY SSF50249 3 126 1.58E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.2E-30 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 PIRSF PIRSF002158 11 276 2.0E-96 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 SUPERFAMILY SSF50104 128 273 1.75E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 Gene3D G3DSA:4.10.950.10 197 274 3.9E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 PANTHER PTHR13691 1 276 7.7E-135 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 SMART SM01383 42 119 5.8E-40 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.399 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 PANTHER PTHR13691:SF5 1 276 7.7E-135 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIC_RS16265 fb6df45b38295be855e739bfc1462cce 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 4.8E-124 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 645 792 3.4E-38 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 SUPERFAMILY SSF69255 395 482 1.26E-28 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 532 3.8E-107 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 SUPERFAMILY SSF69279 226 392 3.4E-33 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 Gene3D G3DSA:2.40.50.230 401 482 6.8E-34 T 22-04-2016 IPR006531 Gp5 N-terminal RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 506 611 9.2E-32 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 29 530 2.8E-123 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 Gene3D G3DSA:3.55.50.10 127 217 2.3E-24 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 Pfam PF05954 Phage late control gene D protein (GPD) 41 360 6.9E-89 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 SUPERFAMILY SSF69349 472 525 2.2E-7 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 PANTHER PTHR32305 16 509 4.6E-130 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 SUPERFAMILY SSF69279 29 212 1.87E-42 T 22-04-2016 RPIC_RS11090 259981b371ec4efb6bb60d3db77c84b5 862 PANTHER PTHR32305:SF9 16 509 4.6E-130 T 22-04-2016 RPIC_RS04170 7b9b5a7fcafed9e669859c60d20633f6 239 SUPERFAMILY SSF50447 2 92 1.94E-12 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS04170 7b9b5a7fcafed9e669859c60d20633f6 239 SMART SM00863 191 234 1.3E-12 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC_RS04170 7b9b5a7fcafed9e669859c60d20633f6 239 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 191 233 5.3E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC_RS04170 7b9b5a7fcafed9e669859c60d20633f6 239 SUPERFAMILY SSF55186 98 235 3.79E-30 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RPIC_RS04170 7b9b5a7fcafed9e669859c60d20633f6 239 Pfam PF01411 tRNA synthetases class II (A) 17 98 1.1E-9 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RPIC_RS04170 7b9b5a7fcafed9e669859c60d20633f6 239 PANTHER PTHR11777 1 233 4.9E-48 T 22-04-2016 RPIC_RS10925 877597b01f008f0cf448a2bd5630ec1f 419 Pfam PF13458 Periplasmic binding protein 27 379 1.6E-68 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS10925 877597b01f008f0cf448a2bd5630ec1f 419 PANTHER PTHR30483 1 379 1.4E-42 T 22-04-2016 RPIC_RS10925 877597b01f008f0cf448a2bd5630ec1f 419 Gene3D G3DSA:3.40.50.2300 162 309 2.4E-22 T 22-04-2016 RPIC_RS10925 877597b01f008f0cf448a2bd5630ec1f 419 Gene3D G3DSA:3.40.50.2300 310 368 1.7E-27 T 22-04-2016 RPIC_RS10925 877597b01f008f0cf448a2bd5630ec1f 419 Gene3D G3DSA:3.40.50.2300 24 161 1.7E-27 T 22-04-2016 RPIC_RS10925 877597b01f008f0cf448a2bd5630ec1f 419 SUPERFAMILY SSF53822 27 379 1.01E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 284 3.5E-65 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 Pfam PF05175 Methyltransferase small domain 111 207 1.2E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 12 288 42.282 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 PANTHER PTHR18895:SF64 7 288 1.8E-89 T 22-04-2016 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 Gene3D G3DSA:1.10.8.10 12 92 1.9E-23 T 22-04-2016 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 Gene3D G3DSA:3.40.50.150 94 288 2.7E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 PANTHER PTHR18895 7 288 1.8E-89 T 22-04-2016 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 193 199 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 31 283 6.3E-82 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RPIC_RS15540 330a519919d7005108318ccb73e815d5 300 SUPERFAMILY SSF53335 17 285 1.49E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1072 13.208 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SUPERFAMILY SSF52335 944 1079 2.62E-38 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1061 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PANTHER PTHR11405:SF5 1 1068 0.0 T 22-04-2016 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SUPERFAMILY SSF56059 128 408 1.03E-106 T 22-04-2016 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Pfam PF02142 MGS-like domain 965 1051 1.3E-20 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.30.1490.20 692 749 2.1E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SUPERFAMILY SSF52440 1 127 1.87E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 1.6E-37 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.40.50.20 540 667 4.3E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SMART SM00851 964 1051 4.3E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SMART SM01096 426 549 7.5E-71 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.30.1490.20 143 206 2.9E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:1.10.1030.10 407 539 5.8E-49 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.40.50.20 3 108 4.8E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.40.50.1380 946 1080 1.2E-41 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 714 728 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 678 883 3.2E-36 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 6.6E-71 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PANTHER PTHR11405 1 1068 0.0 T 22-04-2016 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 847 854 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.30.470.20 207 406 3.2E-76 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Gene3D G3DSA:3.30.470.20 750 943 3.0E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SUPERFAMILY SSF56059 678 942 3.36E-104 T 22-04-2016 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SUPERFAMILY SSF48108 403 554 7.72E-50 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 3.9E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 SUPERFAMILY SSF52440 561 680 5.75E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS10015 c58119817d4d64f9da52a7c096f85e1b 1081 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1077 13.375 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 Gene3D G3DSA:3.30.572.10 1 264 3.9E-134 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 3.2E-96 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 7.2E-40 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.6E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 SUPERFAMILY SSF55831 1 264 1.44E-129 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 PANTHER PTHR11548 1 264 6.6E-194 T 22-04-2016 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 45.931 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS04010 3d3bba860a5418868f46d119889b671c 264 Pfam PF00303 Thymidylate synthase 3 264 2.3E-123 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 SUPERFAMILY SSF51735 136 318 2.88E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 SUPERFAMILY SSF52283 1 167 9.35E-52 T 22-04-2016 RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 370 3.0E-74 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 SMART SM01003 4 136 3.4E-67 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 PANTHER PTHR10160 1 369 7.7E-171 T 22-04-2016 RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 Gene3D G3DSA:3.40.50.1770 187 368 8.3E-41 T 22-04-2016 RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 SMART SM01002 145 314 6.9E-85 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 Gene3D G3DSA:3.40.50.1770 2 186 3.3E-61 T 22-04-2016 RPIC_RS14620 3a106fab0c11318e6a3be226044e391e 379 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.2E-42 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RPIC_RS14005 287ab17802a68cc2076fa3b10bbc6f24 114 Pfam PF03927 NapD protein 21 95 1.8E-27 T 22-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly RPIC_RS14005 287ab17802a68cc2076fa3b10bbc6f24 114 PANTHER PTHR38603 1 111 4.7E-18 T 22-04-2016 RPIC_RS00455 c985c1bc231c6cbdb6d8237cd134af0b 327 Gene3D G3DSA:3.20.20.70 13 307 1.1E-46 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS00455 c985c1bc231c6cbdb6d8237cd134af0b 327 PANTHER PTHR32332 6 317 6.1E-146 T 22-04-2016 RPIC_RS00455 c985c1bc231c6cbdb6d8237cd134af0b 327 SUPERFAMILY SSF51412 13 313 9.34E-58 T 22-04-2016 RPIC_RS00455 c985c1bc231c6cbdb6d8237cd134af0b 327 Pfam PF03060 Nitronate monooxygenase 91 310 4.9E-23 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RPIC_RS00455 c985c1bc231c6cbdb6d8237cd134af0b 327 PANTHER PTHR32332:SF21 6 317 6.1E-146 T 22-04-2016 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 12 656 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 393 411 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 421 440 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 130 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 176 188 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 309 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 379 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 134 158 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 471 492 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 334 349 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 237 256 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PRINTS PR01165 Cytochrome c oxidase subunit I signature 208 226 9.3E-95 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 SUPERFAMILY SSF81442 53 570 1.57E-176 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 290 344 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 Gene3D G3DSA:1.20.210.10 51 586 3.5E-187 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 513 2.3E-135 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PANTHER PTHR10422:SF26 43 623 0.0 T 22-04-2016 RPIC_RS09205 07a8200f9d7147fdce563f623d051c59 667 PANTHER PTHR10422 43 623 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 Gene3D G3DSA:1.10.10.10 1 83 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 PANTHER PTHR30346:SF15 1 299 1.6E-95 T 22-04-2016 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 SUPERFAMILY SSF53850 88 297 2.61E-40 T 22-04-2016 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 Gene3D G3DSA:3.40.190.10 176 275 9.9E-35 T 22-04-2016 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 SUPERFAMILY SSF46785 1 82 3.15E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 Pfam PF03466 LysR substrate binding domain 89 296 3.1E-46 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 Gene3D G3DSA:3.40.190.10 90 175 1.7E-20 T 22-04-2016 RPIC_RS14540 45abbef1494938c8782aef263aa4f91d 315 PANTHER PTHR30346 1 299 1.6E-95 T 22-04-2016 RPIC_RS06430 1858c2430833c341e150090e156ef886 291 SUPERFAMILY SSF55920 12 170 1.9E-22 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06430 1858c2430833c341e150090e156ef886 291 SUPERFAMILY SSF55920 204 270 1.9E-22 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06430 1858c2430833c341e150090e156ef886 291 Pfam PF00557 Metallopeptidase family M24 16 264 3.8E-22 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06430 1858c2430833c341e150090e156ef886 291 Gene3D G3DSA:3.90.230.10 12 270 4.9E-27 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06430 1858c2430833c341e150090e156ef886 291 PANTHER PTHR10804:SF92 12 171 1.6E-53 T 22-04-2016 RPIC_RS06430 1858c2430833c341e150090e156ef886 291 PANTHER PTHR10804 12 171 1.6E-53 T 22-04-2016 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Pfam PF00271 Helicase conserved C-terminal domain 257 349 2.9E-14 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Gene3D G3DSA:1.10.150.80 566 635 2.4E-14 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SMART SM00956 429 536 1.7E-52 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SUPERFAMILY SSF47819 558 633 3.27E-19 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Pfam PF09382 RQC domain 424 538 1.6E-36 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 23 631 2.0E-236 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SUPERFAMILY SSF52540 221 474 3.95E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 PANTHER PTHR13710 11 632 1.2E-275 T 22-04-2016 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Gene3D G3DSA:3.40.50.300 23 210 7.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SMART SM00490 268 349 1.5E-24 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 25 485 1.8E-150 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Pfam PF00570 HRDC domain 566 629 3.2E-20 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Pfam PF00270 DEAD/DEAH box helicase 39 198 2.9E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Pfam PF16124 RecQ zinc-binding 361 422 9.7E-18 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Gene3D G3DSA:1.10.10.10 362 538 2.0E-56 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SMART SM00487 31 231 7.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 Gene3D G3DSA:3.40.50.300 219 361 8.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 PANTHER PTHR13710:SF81 11 632 1.2E-275 T 22-04-2016 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SMART SM00341 560 637 2.7E-11 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 RPIC_RS16320 a5839c90f7ac7ac13a91aba755905e67 637 SUPERFAMILY SSF52540 23 213 1.49E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06660 c604c9d869e04b1e20b420b61f5f7794 415 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 15 404 1.1E-87 T 22-04-2016 IPR018721 Protein of unknown function DUF2252 RPIC_RS06660 c604c9d869e04b1e20b420b61f5f7794 415 Gene3D G3DSA:3.90.1200.10 50 172 7.5E-6 T 22-04-2016 RPIC_RS06660 c604c9d869e04b1e20b420b61f5f7794 415 PANTHER PTHR39441 3 302 2.9E-35 T 22-04-2016 RPIC_RS06660 c604c9d869e04b1e20b420b61f5f7794 415 SUPERFAMILY SSF56112 39 156 1.31E-5 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS06375 54e9125b86847d15172dce301fcd531f 272 Pfam PF01148 Cytidylyltransferase family 4 271 6.7E-58 T 22-04-2016 RPIC_RS06375 54e9125b86847d15172dce301fcd531f 272 PANTHER PTHR13773 1 271 2.5E-57 T 22-04-2016 RPIC_RS06375 54e9125b86847d15172dce301fcd531f 272 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 232 258 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 Gene3D G3DSA:3.30.700.10 15 110 1.8E-16 T 22-04-2016 RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 3.0E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 3.0E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 13 34 9.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 36 124 1.6E-22 T 22-04-2016 IPR031982 Type IV minor pilin ComP RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 PANTHER PTHR30093 7 82 2.5E-18 T 22-04-2016 RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 5.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS03300 9470cae953263eec92a0b133fe2cbfdd 144 SUPERFAMILY SSF54523 15 135 6.2E-25 T 22-04-2016 RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 6.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 6.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 6.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 258 4.9E-56 T 22-04-2016 RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 Gene3D G3DSA:3.40.50.720 5 259 1.5E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 SUPERFAMILY SSF51735 12 259 6.67E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 187 4.3E-4 T 22-04-2016 RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PANTHER PTHR24322 17 146 2.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07145 15522eb207a231c40374fbaa4accca16 260 PANTHER PTHR24322 166 198 2.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 SUPERFAMILY SSF109604 409 534 2.51E-15 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Gene3D G3DSA:1.10.3210.10 412 599 6.7E-25 T 22-04-2016 IPR006674 HD domain RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 24 858 4.1E-241 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 SUPERFAMILY SSF55021 789 844 1.17E-9 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 862 328.848 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Gene3D G3DSA:3.30.70.260 789 853 4.2E-12 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Gene3D G3DSA:3.30.70.260 680 754 1.1E-6 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 PANTHER PTHR13734:SF45 84 674 3.6E-97 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Pfam PF01966 HD domain 443 563 6.7E-10 T 22-04-2016 IPR006674 HD domain RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 SMART SM00471 438 585 5.1E-4 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 PIRSF PIRSF006288 1 862 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 PANTHER PTHR13734 84 674 3.6E-97 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Pfam PF03445 Putative nucleotidyltransferase DUF294 24 106 5.0E-7 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 SUPERFAMILY SSF55021 680 750 3.63E-10 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 SUPERFAMILY SSF81593 170 298 2.98E-11 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Gene3D G3DSA:3.30.460.10 64 154 7.0E-8 T 22-04-2016 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 Pfam PF08335 GlnD PII-uridylyltransferase 167 304 2.1E-32 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 RPIC_RS06340 4fde9c026e8b8a2564f3b67bb0040c40 862 SUPERFAMILY SSF81301 27 158 4.25E-22 T 22-04-2016 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 Pfam PF05175 Methyltransferase small domain 135 217 1.1E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 297 4.1E-123 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 PIRSF PIRSF037167 2 300 5.7E-127 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 206 212 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 PANTHER PTHR18895 14 300 1.8E-116 T 22-04-2016 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 297 6.9E-63 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 5 300 49.971 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 Gene3D G3DSA:3.40.50.150 107 280 9.5E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 Gene3D G3DSA:1.10.8.10 14 105 3.0E-9 T 22-04-2016 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 PANTHER PTHR18895:SF66 14 300 1.8E-116 T 22-04-2016 RPIC_RS06265 df21fb0ef84447d37a20594f9b593f2e 300 SUPERFAMILY SSF53335 15 282 4.89E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 444 454 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 Pfam PF00082 Subtilase family 192 482 2.0E-34 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 SUPERFAMILY SSF52743 256 511 3.4E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 SUPERFAMILY SSF52743 174 226 3.4E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 263 273 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795:SF419 262 413 8.8E-42 T 22-04-2016 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795:SF419 430 522 8.8E-42 T 22-04-2016 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795:SF419 184 246 8.8E-42 T 22-04-2016 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795:SF419 1 155 8.8E-42 T 22-04-2016 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795:SF419 596 617 8.8E-42 T 22-04-2016 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PRINTS PR00723 Subtilisin serine protease family (S8) signature 259 272 9.8E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 9.8E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PRINTS PR00723 Subtilisin serine protease family (S8) signature 443 459 9.8E-12 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 Gene3D G3DSA:3.40.50.200 113 509 3.8E-67 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 205 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795 262 413 8.8E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795 430 522 8.8E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795 184 246 8.8E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795 1 155 8.8E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 PANTHER PTHR10795 596 617 8.8E-42 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14245 dc72f9459946ee880cca5cfd94e3ab51 648 SUPERFAMILY SSF49299 513 606 7.06E-6 T 22-04-2016 IPR000601 PKD domain RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 Gene3D G3DSA:3.90.226.10 25 213 1.4E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 112 123 - T 22-04-2016 IPR018215 ClpP, Ser active site RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PANTHER PTHR10381:SF22 25 215 2.0E-135 T 22-04-2016 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 Pfam PF00574 Clp protease 35 214 5.7E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 133 152 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 112 129 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 190 209 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 41 56 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PRINTS PR00127 Clp protease catalytic subunit P signature 81 101 4.1E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 24 214 6.1E-106 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 PANTHER PTHR10381 25 215 2.0E-135 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 134 147 - T 22-04-2016 IPR033135 ClpP, histidine active site RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 SUPERFAMILY SSF52096 33 212 8.9E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS09170 33d278da818e8b150fac1fd54fa3f658 215 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 25 215 45.092 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 318 331 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 15 406 3.6E-107 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 1.7E-13 T 22-04-2016 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 319 1.7E-13 T 22-04-2016 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 15 37 1.7E-13 T 22-04-2016 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 335 1.7E-13 T 22-04-2016 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 PANTHER PTHR13789:SF214 13 406 1.2E-84 T 22-04-2016 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 Pfam PF01494 FAD binding domain 14 340 3.4E-16 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 Gene3D G3DSA:3.50.50.60 302 340 2.3E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 Gene3D G3DSA:3.50.50.60 12 200 2.3E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 SUPERFAMILY SSF51905 13 197 2.38E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 SUPERFAMILY SSF51905 300 406 2.38E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 PANTHER PTHR13789 13 406 1.2E-84 T 22-04-2016 RPIC_RS01885 8dd52026ad35e4418b26842f30aa8f8a 411 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 15 407 6.1E-128 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 SUPERFAMILY SSF53901 5 270 5.51E-83 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 PANTHER PTHR18919:SF110 1 393 1.8E-221 T 22-04-2016 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 Pfam PF00108 Thiolase, N-terminal domain 5 263 2.7E-88 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 Gene3D G3DSA:3.40.47.10 277 391 1.8E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 Gene3D G3DSA:3.40.47.10 143 195 1.8E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 Gene3D G3DSA:3.40.47.10 196 275 7.6E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 Gene3D G3DSA:3.40.47.10 5 124 7.6E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 PIRSF PIRSF000429 1 393 2.7E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 SUPERFAMILY SSF53901 271 392 3.95E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 PANTHER PTHR18919 1 393 1.8E-221 T 22-04-2016 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 1.3E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC_RS00605 bf4b1416b26fce78bcb2fe3ead7c3a06 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 5.1E-39 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 PANTHER PTHR11070 7 529 3.9E-273 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 PANTHER PTHR11070 559 668 3.9E-273 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Gene3D G3DSA:3.40.50.300 7 118 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Gene3D G3DSA:3.40.50.300 196 297 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Gene3D G3DSA:1.10.10.160 122 195 3.3E-15 T 22-04-2016 IPR013986 DExx box DNA helicase domain RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 283 1.2E-67 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Gene3D G3DSA:1.10.486.10 401 541 1.3E-35 T 22-04-2016 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Gene3D G3DSA:3.40.50.300 298 400 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Gene3D G3DSA:3.40.50.300 582 669 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Pfam PF13361 UvrD-like helicase C-terminal domain 289 648 5.8E-62 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 PANTHER PTHR11070:SF19 7 529 3.9E-273 T 22-04-2016 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 PANTHER PTHR11070:SF19 559 668 3.9E-273 T 22-04-2016 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 7 699 37.869 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 SUPERFAMILY SSF52540 574 668 9.59E-150 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17270 87e27b2e9c0f499dff8fa50f1d1faf59 706 SUPERFAMILY SSF52540 7 533 9.59E-150 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 SMART SM00382 600 769 3.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 SMART SM00382 197 342 3.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Gene3D G3DSA:3.40.50.300 158 340 1.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 762 6.3E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 PANTHER PTHR11638 1 861 0.0 T 22-04-2016 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 SMART SM01086 768 857 1.1E-36 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 SUPERFAMILY SSF81923 4 140 1.14E-37 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 PANTHER PTHR11638:SF18 1 861 0.0 T 22-04-2016 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Gene3D G3DSA:1.10.1780.10 1 146 1.9E-43 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 3.6E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Gene3D G3DSA:3.40.50.300 553 778 8.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Gene3D G3DSA:1.10.8.60 779 858 3.4E-30 T 22-04-2016 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 846 3.0E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 1.3E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.1E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 144 3.8E-8 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 SUPERFAMILY SSF52540 549 855 9.26E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 Gene3D G3DSA:1.10.8.60 342 427 4.9E-37 T 22-04-2016 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RPIC_RS06010 65a227e66eb72be26326d51ebf068281 862 SUPERFAMILY SSF52540 158 547 1.55E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16945 78ea2347a1c70c78aef2a369c1dbdf0a 199 PANTHER PTHR14969:SF20 2 156 5.7E-35 T 22-04-2016 RPIC_RS16945 78ea2347a1c70c78aef2a369c1dbdf0a 199 PANTHER PTHR14969 2 156 5.7E-35 T 22-04-2016 RPIC_RS16945 78ea2347a1c70c78aef2a369c1dbdf0a 199 Gene3D G3DSA:1.20.144.10 4 164 9.3E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS16945 78ea2347a1c70c78aef2a369c1dbdf0a 199 SMART SM00014 56 165 2.5E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS16945 78ea2347a1c70c78aef2a369c1dbdf0a 199 SUPERFAMILY SSF48317 1 175 7.98E-34 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS16945 78ea2347a1c70c78aef2a369c1dbdf0a 199 Pfam PF01569 PAP2 superfamily 57 164 2.1E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS20970 949d24d69edd4afb61578cc5b48edb5e 341 PANTHER PTHR22911:SF41 130 341 3.0E-89 T 22-04-2016 RPIC_RS20970 949d24d69edd4afb61578cc5b48edb5e 341 TIGRFAM TIGR00688 rarD: protein RarD 151 337 2.1E-55 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RPIC_RS20970 949d24d69edd4afb61578cc5b48edb5e 341 Pfam PF00892 EamA-like transporter family 152 287 7.1E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS20970 949d24d69edd4afb61578cc5b48edb5e 341 PANTHER PTHR22911 130 341 3.0E-89 T 22-04-2016 RPIC_RS20970 949d24d69edd4afb61578cc5b48edb5e 341 SUPERFAMILY SSF103481 191 289 3.66E-11 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PANTHER PTHR22912 15 161 1.9E-19 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PANTHER PTHR22912 218 330 1.9E-19 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PANTHER PTHR22912 180 201 1.9E-19 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 Gene3D G3DSA:3.50.50.60 127 355 4.7E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 SUPERFAMILY SSF51905 11 354 5.01E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 37 3.3E-7 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 326 3.3E-7 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 3.3E-7 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 1.1E-10 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 35 1.1E-10 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 141 1.1E-10 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 1.1E-10 T 22-04-2016 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 348 7.3E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12000 ea45b4896351bcd99e38a6ab27980d6c 444 Gene3D G3DSA:3.50.50.60 14 126 9.3E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 Gene3D G3DSA:2.70.40.10 3 187 3.2E-69 T 22-04-2016 IPR029054 dUTPase-like RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 SUPERFAMILY SSF51283 3 187 4.06E-53 T 22-04-2016 IPR029054 dUTPase-like RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 PANTHER PTHR11241:SF1 1 187 2.4E-77 T 22-04-2016 RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 PANTHER PTHR11241 1 187 2.4E-77 T 22-04-2016 RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 Pfam PF00692 dUTPase 82 184 6.4E-6 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 1.5E-49 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RPIC_RS12700 7295da65c4b77abb20ae801ffa050c66 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.593 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 RPIC_RS08655 df97872b45d885a5c9669ec759810a12 418 SUPERFAMILY SSF56954 1 417 1.02E-75 T 22-04-2016 RPIC_RS08655 df97872b45d885a5c9669ec759810a12 418 Pfam PF02321 Outer membrane efflux protein 247 416 1.7E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08655 df97872b45d885a5c9669ec759810a12 418 Pfam PF02321 Outer membrane efflux protein 44 218 2.7E-18 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08655 df97872b45d885a5c9669ec759810a12 418 PANTHER PTHR30203 42 417 4.4E-58 T 22-04-2016 RPIC_RS08655 df97872b45d885a5c9669ec759810a12 418 PANTHER PTHR30203:SF1 42 417 4.4E-58 T 22-04-2016 RPIC_RS08655 df97872b45d885a5c9669ec759810a12 418 Gene3D G3DSA:1.20.1600.10 36 417 2.1E-57 T 22-04-2016 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 PANTHER PTHR26402:SF575 1 222 2.2E-103 T 22-04-2016 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.5E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 Gene3D G3DSA:3.40.50.2300 1 119 3.0E-39 T 22-04-2016 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 SMART SM00862 146 221 4.8E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 SUPERFAMILY SSF52172 1 118 3.13E-39 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 SMART SM00448 1 112 2.2E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 PANTHER PTHR26402 1 222 2.2E-103 T 22-04-2016 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 3.8E-107 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 Gene3D G3DSA:1.10.10.10 125 224 1.8E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 SUPERFAMILY SSF46894 123 223 5.67E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS08430 005c4668cfdfca3908fc40ba5c2556f5 228 Pfam PF00072 Response regulator receiver domain 4 113 3.2E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS01045 02cfd049dc477cfda16e8c8854a8544c 240 Pfam PF00156 Phosphoribosyl transferase domain 145 236 2.0E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS01045 02cfd049dc477cfda16e8c8854a8544c 240 SUPERFAMILY SSF53271 62 238 6.29E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01045 02cfd049dc477cfda16e8c8854a8544c 240 PANTHER PTHR11907:SF9 1 240 3.8E-42 T 22-04-2016 RPIC_RS01045 02cfd049dc477cfda16e8c8854a8544c 240 Gene3D G3DSA:3.40.50.2020 65 239 8.8E-26 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01045 02cfd049dc477cfda16e8c8854a8544c 240 PANTHER PTHR11907 1 240 3.8E-42 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 PANTHER PTHR11014:SF64 26 432 5.2E-140 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 Pfam PF07687 Peptidase dimerisation domain 226 326 4.5E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 PANTHER PTHR11014 26 432 5.2E-140 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 Gene3D G3DSA:3.30.70.360 230 334 7.9E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 Pfam PF01546 Peptidase family M20/M25/M40 122 425 6.6E-28 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 153 192 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 SUPERFAMILY SSF55031 229 340 2.99E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 Gene3D G3DSA:3.40.630.10 36 229 1.4E-50 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 Gene3D G3DSA:3.40.630.10 338 427 1.4E-50 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 SUPERFAMILY SSF53187 349 426 3.43E-48 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 SUPERFAMILY SSF53187 36 237 3.43E-48 T 22-04-2016 RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 PIRSF PIRSF037238 35 428 9.6E-100 T 22-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase RPIC_RS16730 918440c50976a35b6c4620f7dbb85990 436 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 121 130 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC_RS00185 c3841358ff0f6f0ad54f516992974287 275 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 12 265 7.5E-109 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 RPIC_RS00185 c3841358ff0f6f0ad54f516992974287 275 PIRSF PIRSF028756 12 268 2.1E-75 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RPIC_RS00185 c3841358ff0f6f0ad54f516992974287 275 Gene3D G3DSA:3.40.50.300 10 264 2.4E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00185 c3841358ff0f6f0ad54f516992974287 275 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 40 258 6.4E-72 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RPIC_RS00185 c3841358ff0f6f0ad54f516992974287 275 PANTHER PTHR34383 36 263 1.5E-105 T 22-04-2016 RPIC_RS00185 c3841358ff0f6f0ad54f516992974287 275 SUPERFAMILY SSF52540 67 256 1.72E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04820 ff1343a0988157f799c759b78ca6abe1 175 PANTHER PTHR13061 1 159 1.9E-63 T 22-04-2016 RPIC_RS04820 ff1343a0988157f799c759b78ca6abe1 175 SUPERFAMILY SSF51161 4 170 2.91E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS04820 ff1343a0988157f799c759b78ca6abe1 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 4.8E-8 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS04820 ff1343a0988157f799c759b78ca6abe1 175 Gene3D G3DSA:2.160.10.10 5 169 7.2E-46 T 22-04-2016 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 SUPERFAMILY SSF47203 281 454 1.22E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 PANTHER PTHR10909 3 474 3.6E-190 T 22-04-2016 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Gene3D G3DSA:1.10.540.10 34 157 1.5E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Gene3D G3DSA:2.40.110.10 160 266 3.4E-24 T 22-04-2016 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 33 1.2E-13 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 SUPERFAMILY SSF56645 35 271 4.45E-58 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 PANTHER PTHR10909:SF296 3 474 3.6E-190 T 22-04-2016 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 2.0E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 471 587 3.5E-26 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 156 3.2E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 8.4E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS03895 aac9c7de8d0ca3d644c57268eea06543 594 Gene3D G3DSA:1.20.140.10 267 457 2.2E-54 T 22-04-2016 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 PANTHER PTHR11079:SF84 28 344 3.0E-121 T 22-04-2016 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 Pfam PF00849 RNA pseudouridylate synthase 117 266 1.1E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 Pfam PF01479 S4 domain 41 87 5.1E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 37 333 5.6E-83 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 156 170 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 SUPERFAMILY SSF55120 104 333 1.58E-65 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 SUPERFAMILY SSF55174 40 91 1.09E-7 T 22-04-2016 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 PANTHER PTHR11079 28 344 3.0E-121 T 22-04-2016 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 SMART SM00363 41 100 1.4E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS04455 aaa8332d6b828bb808188960053f116c 344 Gene3D G3DSA:3.10.290.10 40 99 2.1E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Pfam PF13493 Domain of unknown function (DUF4118) 433 539 1.0E-32 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Gene3D G3DSA:3.30.565.10 757 928 8.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 SMART SM00387 812 927 3.2E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 868 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 911 924 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 887 905 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PRINTS PR00344 Bacterial sensor protein C-terminal signature 872 882 7.6E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Gene3D G3DSA:3.40.50.620 248 351 8.9E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 SMART SM00388 703 770 1.6E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PANTHER PTHR24423 25 200 3.0E-129 T 22-04-2016 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PANTHER PTHR24423 637 930 3.0E-129 T 22-04-2016 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 SUPERFAMILY SSF55874 760 930 5.11E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PANTHER PTHR24423:SF562 25 200 3.0E-129 T 22-04-2016 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 PANTHER PTHR24423:SF562 637 930 3.0E-129 T 22-04-2016 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 SUPERFAMILY SSF47384 696 770 6.87E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 816 925 2.6E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Pfam PF00512 His Kinase A (phospho-acceptor) domain 704 769 5.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Gene3D G3DSA:1.20.120.620 432 533 1.1E-37 T 22-04-2016 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Gene3D G3DSA:1.10.287.130 699 756 3.2E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 SUPERFAMILY SSF52402 254 354 7.01E-6 T 22-04-2016 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 25 233 1.0E-95 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Pfam PF13492 GAF domain 560 684 4.3E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS17815 334d04bc9c8f8a593ba01e66c75ce64b 938 Gene3D G3DSA:3.40.50.300 23 232 3.5E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 SUPERFAMILY SSF46894 119 216 5.39E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 PANTHER PTHR26402:SF279 1 217 6.8E-86 T 22-04-2016 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 Gene3D G3DSA:1.10.10.10 122 216 1.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 Gene3D G3DSA:3.40.50.2300 1 120 1.3E-37 T 22-04-2016 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 216 5.3E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 PANTHER PTHR26402 1 217 6.8E-86 T 22-04-2016 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 SMART SM00448 1 112 1.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 SUPERFAMILY SSF52172 1 130 5.83E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS17975 cb9a1c48a1d2da34bbdba3bfb5e4457d 221 SMART SM00862 146 217 3.9E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS02360 b4373b52e04c8369bb5d654189fdafec 158 Pfam PF01967 MoaC family 15 150 5.0E-55 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RPIC_RS02360 b4373b52e04c8369bb5d654189fdafec 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 37.044 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 RPIC_RS02360 b4373b52e04c8369bb5d654189fdafec 158 PANTHER PTHR22960 1 158 8.6E-97 T 22-04-2016 RPIC_RS02360 b4373b52e04c8369bb5d654189fdafec 158 Gene3D G3DSA:3.30.70.640 3 157 9.7E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RPIC_RS02360 b4373b52e04c8369bb5d654189fdafec 158 SUPERFAMILY SSF55040 11 155 8.37E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 RPIC_RS02360 b4373b52e04c8369bb5d654189fdafec 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 6.6E-61 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 RPIC_RS04240 e7da17edf125fd1fa23d3319e173add0 202 SUPERFAMILY SSF55729 6 182 4.3E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS04240 e7da17edf125fd1fa23d3319e173add0 202 Gene3D G3DSA:3.40.630.30 2 198 8.6E-55 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS04240 e7da17edf125fd1fa23d3319e173add0 202 Pfam PF13302 Acetyltransferase (GNAT) domain 16 157 5.6E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS04240 e7da17edf125fd1fa23d3319e173add0 202 PANTHER PTHR13256 6 202 2.9E-85 T 22-04-2016 RPIC_RS04240 e7da17edf125fd1fa23d3319e173add0 202 PANTHER PTHR13256:SF20 6 202 2.9E-85 T 22-04-2016 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 Gene3D G3DSA:2.40.30.30 187 307 5.4E-39 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 Pfam PF01687 Riboflavin kinase 183 306 2.8E-35 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 SUPERFAMILY SSF52374 15 177 1.8E-38 T 22-04-2016 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 PANTHER PTHR22749 1 308 8.6E-117 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 75 8.3E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 PIRSF PIRSF004491 2 308 8.8E-98 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 SMART SM00904 182 307 8.1E-55 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 306 1.1E-90 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 Gene3D G3DSA:3.40.50.620 10 185 8.8E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 PANTHER PTHR22749:SF0 1 308 8.6E-117 T 22-04-2016 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 Pfam PF06574 FAD synthetase 11 165 9.5E-56 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 RPIC_RS13425 3ef5309bec2cc9b3e79d3a2e4db3530a 332 SUPERFAMILY SSF82114 173 307 8.5E-42 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 Gene3D G3DSA:3.30.860.10 1 90 3.9E-42 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.91 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 PIRSF PIRSF002144 1 91 2.6E-33 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 PANTHER PTHR11880 1 91 2.4E-56 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 Pfam PF00203 Ribosomal protein S19 3 83 5.9E-38 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 SUPERFAMILY SSF54570 3 84 1.14E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 RPIC_RS16260 3c87a101cfc30797a6e451a467b1fb10 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.3E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 808 2.4E-104 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 562 581 1.1E-20 T 22-04-2016 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 767 779 1.1E-20 T 22-04-2016 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 731 746 1.1E-20 T 22-04-2016 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 714 729 1.1E-20 T 22-04-2016 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 SUPERFAMILY SSF47831 311 409 6.41E-22 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Gene3D G3DSA:3.40.930.10 3 142 4.1E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 142 7.6E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 SUPERFAMILY SSF55804 5 142 4.97E-36 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Pfam PF05524 PEP-utilising enzyme, N-terminal 276 394 4.9E-19 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Pfam PF00381 PTS HPr component phosphorylation site 160 238 3.0E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 494 3.9E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Gene3D G3DSA:3.20.20.60 524 831 1.4E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Gene3D G3DSA:3.50.30.10 400 521 1.9E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 SUPERFAMILY SSF51621 523 816 6.54E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 714 732 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PANTHER PTHR22931:SF15 310 817 1.4E-234 T 22-04-2016 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Gene3D G3DSA:1.10.274.10 312 399 5.1E-25 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 170 177 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 Gene3D G3DSA:3.30.1340.10 160 238 6.3E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 453 464 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 160 238 1.2E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR00107 Phosphocarrier protein signature 195 210 8.3E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR00107 Phosphocarrier protein signature 210 227 8.3E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PRINTS PR00107 Phosphocarrier protein signature 170 186 8.3E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 PANTHER PTHR22931 310 817 1.4E-234 T 22-04-2016 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 SUPERFAMILY SSF55594 160 239 3.01E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 SUPERFAMILY SSF52009 394 513 1.18E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RPIC_RS15320 2673045c3b08d7861a3566b1a8fb7792 846 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 274 831 8.5E-139 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 Gene3D G3DSA:3.30.230.10 9 177 2.5E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 PANTHER PTHR32039 1 504 8.7E-237 T 22-04-2016 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 132 3.8E-44 T 22-04-2016 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 PANTHER PTHR32039:SF7 1 504 8.7E-237 T 22-04-2016 IPR004482 Mg chelatase-related protein RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 219 234 7.1E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 299 313 7.1E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 327 340 7.1E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 351 363 7.1E-7 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 SUPERFAMILY SSF54211 10 177 1.52E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 Gene3D G3DSA:3.40.50.300 199 399 1.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 SUPERFAMILY SSF52540 197 505 1.61E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 Pfam PF01078 Magnesium chelatase, subunit ChlI 200 405 1.2E-97 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 412 504 3.8E-27 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 504 5.9E-179 T 22-04-2016 IPR004482 Mg chelatase-related protein RPIC_RS00940 d756c01e21e6d1bd02d01d338f1cf6f0 510 SMART SM00382 220 402 4.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 3.4E-63 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 196 43.291 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 PANTHER PTHR23133 1 196 5.1E-104 T 22-04-2016 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 SUPERFAMILY SSF54211 3 87 7.46E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 PANTHER PTHR23133:SF2 1 196 5.1E-104 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 Gene3D G3DSA:3.30.230.40 2 89 7.2E-39 T 22-04-2016 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 SUPERFAMILY SSF54211 88 180 3.29E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS15930 0c7b06a2d060e580090087549638d727 196 Gene3D G3DSA:3.30.230.40 91 196 4.5E-30 T 22-04-2016 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 SUPERFAMILY SSF53901 278 398 1.01E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 PANTHER PTHR18919:SF87 3 399 6.0E-166 T 22-04-2016 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 Gene3D G3DSA:3.40.47.10 151 190 2.6E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 Gene3D G3DSA:3.40.47.10 283 398 2.6E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 Pfam PF02803 Thiolase, C-terminal domain 278 398 2.3E-43 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 Gene3D G3DSA:3.40.47.10 191 282 4.6E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 Gene3D G3DSA:3.40.47.10 7 130 4.6E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 6.6E-72 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 PIRSF PIRSF000429 2 399 5.6E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 PANTHER PTHR18919 3 399 6.0E-166 T 22-04-2016 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 SUPERFAMILY SSF53901 4 273 8.97E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RPIC_RS01715 9abca47bf6ec69a20d1c6644d3ca615f 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 8.6E-141 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS11725 a9d7c71962354df536b803a9b24bc209 98 Pfam PF06803 Protein of unknown function (DUF1232) 36 68 1.1E-11 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 RPIC_RS00210 935b999591983b02b5252e9b060546a3 251 PANTHER PTHR30336:SF1 3 235 7.6E-35 T 22-04-2016 RPIC_RS00210 935b999591983b02b5252e9b060546a3 251 PANTHER PTHR30336 3 235 7.6E-35 T 22-04-2016 RPIC_RS00210 935b999591983b02b5252e9b060546a3 251 Gene3D G3DSA:3.40.50.620 68 197 5.7E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS00210 935b999591983b02b5252e9b060546a3 251 Pfam PF02698 DUF218 domain 69 229 1.2E-28 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RPIC_RS06700 a9677da38c6c91539fd583a4f37a8934 224 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 6 148 1.6E-43 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RPIC_RS06700 a9677da38c6c91539fd583a4f37a8934 224 SUPERFAMILY SSF55961 1 147 3.6E-40 T 22-04-2016 RPIC_RS06700 a9677da38c6c91539fd583a4f37a8934 224 PANTHER PTHR38588 2 206 1.2E-27 T 22-04-2016 RPIC_RS06700 a9677da38c6c91539fd583a4f37a8934 224 PANTHER PTHR38588:SF1 2 206 1.2E-27 T 22-04-2016 RPIC_RS06700 a9677da38c6c91539fd583a4f37a8934 224 Gene3D G3DSA:3.30.530.20 1 153 1.5E-56 T 22-04-2016 IPR023393 START-like domain RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.5E-57 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 Gene3D G3DSA:2.40.50.100 80 154 4.8E-33 T 22-04-2016 RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 Pfam PF00364 Biotin-requiring enzyme 82 154 1.9E-26 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 PANTHER PTHR23151 1 154 7.4E-45 T 22-04-2016 RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 SUPERFAMILY SSF51230 80 154 6.41E-26 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 4.6E-21 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 4.6E-21 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 4.6E-21 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 RPIC_RS14925 e1de3d991c0ea4dce6b9cabadd694347 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 22-04-2016 IPR001882 Biotin-binding site RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 413 7.8E-204 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 SMART SM01086 318 413 1.5E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 SMART SM00994 12 51 8.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 416 53.441 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 SUPERFAMILY SSF52540 64 399 2.04E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 SMART SM00382 114 266 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 393 9.6E-14 T 22-04-2016 IPR019489 Clp ATPase, C-terminal RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 PANTHER PTHR11262 9 416 2.3E-245 T 22-04-2016 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 311 5.4E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Gene3D G3DSA:1.10.8.60 317 418 8.2E-36 T 22-04-2016 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Pfam PF06689 ClpX C4-type zinc finger 13 49 3.4E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 SUPERFAMILY SSF57716 13 48 1.01E-11 T 22-04-2016 RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Gene3D G3DSA:3.40.50.300 68 256 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09165 923b9c38e9ada8e58e37c02dbca81187 424 Gene3D G3DSA:3.40.50.300 295 312 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 PANTHER PTHR18919 1 392 9.4E-217 T 22-04-2016 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 Gene3D G3DSA:3.40.47.10 142 184 2.6E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 Gene3D G3DSA:3.40.47.10 276 391 2.6E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 SUPERFAMILY SSF53901 271 391 3.3E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 SUPERFAMILY SSF53901 1 264 1.44E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 PANTHER PTHR18919:SF14 1 392 9.4E-217 T 22-04-2016 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 PIRSF PIRSF000429 1 392 7.8E-117 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 Pfam PF00108 Thiolase, N-terminal domain 5 260 4.1E-61 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 Gene3D G3DSA:3.40.47.10 185 274 8.2E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 Gene3D G3DSA:3.40.47.10 4 125 8.2E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 5.5E-45 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS07155 82b926400d85d2c8c6a131d9c60c6c5e 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 4.1E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS00825 dea79cc72cde81478bd7a979038eeac9 322 PANTHER PTHR36698 2 319 1.7E-45 T 22-04-2016 RPIC_RS00825 dea79cc72cde81478bd7a979038eeac9 322 PANTHER PTHR36698:SF2 2 319 1.7E-45 T 22-04-2016 RPIC_RS00825 dea79cc72cde81478bd7a979038eeac9 322 Pfam PF02470 MlaD protein 40 113 1.5E-13 T 22-04-2016 IPR003399 Mce/MlaD RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 Pfam PF00005 ABC transporter 18 164 2.4E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 SMART SM00382 27 214 2.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 SUPERFAMILY SSF50331 239 356 5.16E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 Pfam PF12857 TOBE-like domain 294 351 1.4E-18 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 PANTHER PTHR24220 4 291 2.3E-140 T 22-04-2016 RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 Gene3D G3DSA:3.40.50.300 3 241 3.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 6.4E-120 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 PANTHER PTHR24220:SF123 4 291 2.3E-140 T 22-04-2016 RPIC_RS06075 5ef9f0f7c2c384d2085567e808114e82 369 SUPERFAMILY SSF52540 3 246 2.0E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09265 2aa4122410aa07586c376382ae8e58fc 458 SUPERFAMILY SSF56935 96 238 2.56E-29 T 22-04-2016 RPIC_RS09265 2aa4122410aa07586c376382ae8e58fc 458 SUPERFAMILY SSF56935 271 458 2.56E-29 T 22-04-2016 RPIC_RS09265 2aa4122410aa07586c376382ae8e58fc 458 Pfam PF07396 Phosphate-selective porin O and P 107 445 8.7E-11 T 22-04-2016 IPR010870 Phosphate-selective porin O/P RPIC_RS09265 2aa4122410aa07586c376382ae8e58fc 458 Gene3D G3DSA:2.40.160.10 106 446 1.1E-16 T 22-04-2016 IPR023614 Porin domain RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 Pfam PF00297 Ribosomal protein L3 56 189 7.5E-17 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 Gene3D G3DSA:2.40.30.10 8 37 1.8E-9 T 22-04-2016 RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 Gene3D G3DSA:2.40.30.10 165 218 1.8E-9 T 22-04-2016 RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 SUPERFAMILY SSF50447 4 217 6.53E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 210 3.8E-87 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 Gene3D G3DSA:4.10.960.10 84 164 2.2E-28 T 22-04-2016 RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 39.03 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16280 6162b84052a40b4cb4f3a6cbe55f24f8 221 PANTHER PTHR11229 1 219 1.3E-109 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS01370 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007 1 258 4.6E-130 T 22-04-2016 RPIC_RS01370 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF01609 Transposase DDE domain 100 254 2.9E-21 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS01370 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 83 1.1E-19 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family RPIC_RS01370 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007:SF17 1 258 4.6E-130 T 22-04-2016 RPIC_RS04120 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007 1 258 4.6E-130 T 22-04-2016 RPIC_RS04120 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF01609 Transposase DDE domain 100 254 2.9E-21 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS04120 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 83 1.1E-19 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family RPIC_RS04120 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007:SF17 1 258 4.6E-130 T 22-04-2016 RPIC_RS01385 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007 1 258 4.6E-130 T 22-04-2016 RPIC_RS01385 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF01609 Transposase DDE domain 100 254 2.9E-21 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS01385 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 83 1.1E-19 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family RPIC_RS01385 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007:SF17 1 258 4.6E-130 T 22-04-2016 RPIC_RS07290 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007 1 258 4.6E-130 T 22-04-2016 RPIC_RS07290 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF01609 Transposase DDE domain 100 254 2.9E-21 T 22-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS07290 b55e27ab5e9555e43725066f147b7a63 268 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 83 1.1E-19 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family RPIC_RS07290 b55e27ab5e9555e43725066f147b7a63 268 PANTHER PTHR30007:SF17 1 258 4.6E-130 T 22-04-2016 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 SUPERFAMILY SSF81342 15 294 3.77E-95 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 PANTHER PTHR19271:SF9 367 462 1.1E-215 T 22-04-2016 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 PANTHER PTHR19271:SF9 9 320 1.1E-215 T 22-04-2016 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 Gene3D G3DSA:1.20.810.10 14 321 5.7E-157 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 Gene3D G3DSA:1.20.810.10 368 458 5.7E-157 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 PIRSF PIRSF038885 4 466 8.3E-150 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 SUPERFAMILY SSF81648 296 338 5.45E-8 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 PANTHER PTHR19271 367 462 1.1E-215 T 22-04-2016 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 PANTHER PTHR19271 9 320 1.1E-215 T 22-04-2016 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 Pfam PF00033 Cytochrome b/b6/petB 31 226 2.6E-63 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 292 440 3.0E-41 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RPIC_RS15815 05102b0fa6c69e1156da436ab3b90e0a 467 SUPERFAMILY SSF81648 362 452 6.7E-18 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 SUPERFAMILY SSF46785 27 165 4.01E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 Gene3D G3DSA:1.10.10.10 33 165 2.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 93 9.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 129 9.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 109 9.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 PRINTS PR00598 Bacterial regulatory protein MarR family signature 143 163 9.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 Pfam PF01047 MarR family 60 117 2.9E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 PANTHER PTHR33164 5 164 3.5E-24 T 22-04-2016 RPIC_RS02535 f4625409fa41036fc019f4e9a2b4eb91 171 SMART SM00347 53 153 7.5E-19 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS06445 f654ddb4ea262b6652319143a6e7910f 283 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 14 282 75.355 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein RPIC_RS06445 f654ddb4ea262b6652319143a6e7910f 283 Pfam PF03618 Kinase/pyrophosphorylase 17 273 5.3E-81 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RPIC_RS06445 f654ddb4ea262b6652319143a6e7910f 283 PANTHER PTHR31756 14 279 2.1E-92 T 22-04-2016 RPIC_RS06445 f654ddb4ea262b6652319143a6e7910f 283 PANTHER PTHR31756:SF3 14 279 2.1E-92 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Gene3D G3DSA:1.10.730.10 672 857 2.5E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Pfam PF06827 Zinc finger found in FPG and IleRS 921 946 9.5E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 873 3.2E-257 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 SUPERFAMILY SSF47323 683 949 4.11E-71 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 36 672 6.9E-205 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 246 269 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 59 70 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 416 431 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 592 601 3.6E-26 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Gene3D G3DSA:3.40.50.620 421 667 1.8E-124 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Gene3D G3DSA:3.40.50.620 22 205 1.8E-124 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 950 20.085 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 SUPERFAMILY SSF52374 21 209 2.41E-123 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 SUPERFAMILY SSF52374 418 679 2.41E-123 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 SUPERFAMILY SSF50677 234 418 2.83E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Gene3D G3DSA:3.90.740.10 214 404 4.4E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PANTHER PTHR11946 242 267 0.0 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PANTHER PTHR11946 290 906 0.0 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PANTHER PTHR11946 16 220 0.0 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 Pfam PF08264 Anticodon-binding domain of tRNA 716 872 3.2E-23 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PANTHER PTHR11946:SF11 242 267 0.0 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PANTHER PTHR11946:SF11 290 906 0.0 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 PANTHER PTHR11946:SF11 16 220 0.0 T 22-04-2016 RPIC_RS13430 5f8222463b1761d2cb85d1e59e18ec1f 959 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 Gene3D G3DSA:2.60.40.200 39 180 8.2E-50 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 PANTHER PTHR10003 33 180 2.1E-44 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 46 180 8.8E-44 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 SUPERFAMILY SSF49329 36 180 1.7E-44 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 79 89 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 136 158 8.6E-6 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 79 101 8.6E-6 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 116 125 8.6E-6 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 RPIC_RS12710 3e90643de12eb3fb0b217d9f8533fa4d 183 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 169 180 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 SUPERFAMILY SSF52096 237 517 1.14E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 Pfam PF01039 Carboxyl transferase domain 48 524 9.4E-152 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 Gene3D G3DSA:3.90.226.10 29 273 1.1E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 Gene3D G3DSA:3.90.226.10 274 528 1.1E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 PANTHER PTHR22855 1 535 0.0 T 22-04-2016 RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 PANTHER PTHR22855:SF35 1 535 0.0 T 22-04-2016 RPIC_RS00575 61ec2a0e61985217cd1b986912bc4b53 535 SUPERFAMILY SSF52096 22 271 7.85E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 Gene3D G3DSA:3.40.190.10 95 178 7.4E-27 T 22-04-2016 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 SUPERFAMILY SSF46785 3 85 2.73E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 SUPERFAMILY SSF53850 92 293 3.44E-35 T 22-04-2016 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 Gene3D G3DSA:3.40.190.10 179 257 6.9E-29 T 22-04-2016 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 PANTHER PTHR30537 1 308 2.0E-105 T 22-04-2016 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 Gene3D G3DSA:1.10.10.10 7 88 1.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 Pfam PF03466 LysR substrate binding domain 92 289 8.7E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS11185 a4bf3fa5f72937cc0d16166bda65e564 311 PANTHER PTHR30537:SF16 1 308 2.0E-105 T 22-04-2016 RPIC_RS12815 50aff0f3bc69733675d1368f8d77169a 378 Pfam PF06250 Protein of unknown function (DUF1016) 27 359 6.5E-111 T 22-04-2016 IPR009362 Protein of unknown function DUF1016 RPIC_RS12815 50aff0f3bc69733675d1368f8d77169a 378 PANTHER PTHR30547 134 366 4.2E-144 T 22-04-2016 RPIC_RS12815 50aff0f3bc69733675d1368f8d77169a 378 PANTHER PTHR30547 8 114 4.2E-144 T 22-04-2016 RPIC_RS12815 50aff0f3bc69733675d1368f8d77169a 378 PANTHER PTHR30547:SF5 134 366 4.2E-144 T 22-04-2016 RPIC_RS12815 50aff0f3bc69733675d1368f8d77169a 378 PANTHER PTHR30547:SF5 8 114 4.2E-144 T 22-04-2016 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 SUPERFAMILY SSF46689 68 119 3.09E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 SUPERFAMILY SSF46689 16 65 7.17E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 PANTHER PTHR11019:SF105 16 123 1.0E-28 T 22-04-2016 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 SMART SM00342 32 115 1.9E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 Pfam PF12833 Helix-turn-helix domain 38 116 2.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 PANTHER PTHR11019 16 123 1.0E-28 T 22-04-2016 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 Gene3D G3DSA:1.10.10.60 16 69 1.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00355 5bafa6270dbfca5ddb898fae115f96fe 168 Gene3D G3DSA:1.10.10.60 70 119 2.4E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Gene3D G3DSA:2.20.200.10 341 376 5.5E-23 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Gene3D G3DSA:2.20.200.10 124 167 5.5E-23 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 PANTHER PTHR30203 10 495 1.8E-129 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 PANTHER PTHR30203:SF6 10 495 1.8E-129 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Pfam PF02321 Outer membrane efflux protein 90 280 1.6E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Pfam PF02321 Outer membrane efflux protein 313 489 1.8E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Gene3D G3DSA:1.20.1600.10 74 114 3.4E-92 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Gene3D G3DSA:1.20.1600.10 378 491 3.4E-92 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 Gene3D G3DSA:1.20.1600.10 168 340 3.4E-92 T 22-04-2016 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 35 491 4.4E-160 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC_RS05590 a94e6490a2954e5cadd2410b420a2cae 509 SUPERFAMILY SSF56954 30 492 2.62E-97 T 22-04-2016 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 ProSitePatterns PS00786 5'-nucleotidase signature 2. 133 144 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 Pfam PF00149 Calcineurin-like phosphoesterase 49 306 2.8E-4 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 Pfam PF02872 5'-nucleotidase, C-terminal domain 406 592 9.9E-24 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PANTHER PTHR11575 46 683 6.4E-161 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PANTHER PTHR11575:SF6 46 683 6.4E-161 T 22-04-2016 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PRINTS PR01607 Apyrase family signature 567 586 2.2E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PRINTS PR01607 Apyrase family signature 333 353 2.2E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PRINTS PR01607 Apyrase family signature 289 312 2.2E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PRINTS PR01607 Apyrase family signature 45 63 2.2E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PRINTS PR01607 Apyrase family signature 261 278 2.2E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 PRINTS PR01607 Apyrase family signature 477 500 2.2E-25 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 SUPERFAMILY SSF56300 45 402 9.87E-72 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 Gene3D G3DSA:3.90.780.10 405 626 3.1E-40 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 SUPERFAMILY SSF55816 403 626 1.44E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC_RS17650 4f9e128ca65b3ba3f41a944fe63d5192 684 Gene3D G3DSA:3.60.21.10 38 403 7.3E-78 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS01070 8b9b58fe3449a70fedd6cbb91e89e910 202 Gene3D G3DSA:2.60.370.10 70 192 4.8E-49 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RPIC_RS01070 8b9b58fe3449a70fedd6cbb91e89e910 202 SUPERFAMILY SSF110111 70 189 1.96E-45 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain RPIC_RS01070 8b9b58fe3449a70fedd6cbb91e89e910 202 PANTHER PTHR21320:SF3 11 187 7.4E-38 T 22-04-2016 RPIC_RS01070 8b9b58fe3449a70fedd6cbb91e89e910 202 PANTHER PTHR21320 11 187 7.4E-38 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC_RS01070 8b9b58fe3449a70fedd6cbb91e89e910 202 PIRSF PIRSF005413 4 201 1.9E-64 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC_RS01070 8b9b58fe3449a70fedd6cbb91e89e910 202 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 43 186 5.4E-49 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 RPIC_RS03960 ce2cb962a5c4e8059b0fba12e60df1ef 234 Pfam PF00293 NUDIX domain 61 186 3.9E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS03960 ce2cb962a5c4e8059b0fba12e60df1ef 234 PANTHER PTHR12992 10 228 3.2E-54 T 22-04-2016 RPIC_RS03960 ce2cb962a5c4e8059b0fba12e60df1ef 234 Gene3D G3DSA:3.90.79.10 56 232 9.0E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS03960 ce2cb962a5c4e8059b0fba12e60df1ef 234 SUPERFAMILY SSF55811 61 225 3.79E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS12270 c5590a89fccd1f019414aec75c752fd9 305 SUPERFAMILY SSF56281 4 305 5.07E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12270 c5590a89fccd1f019414aec75c752fd9 305 Pfam PF12706 Beta-lactamase superfamily domain 51 272 2.2E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12270 c5590a89fccd1f019414aec75c752fd9 305 Gene3D G3DSA:3.60.15.10 4 305 1.6E-111 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12270 c5590a89fccd1f019414aec75c752fd9 305 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 5 305 7.8E-119 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RPIC_RS12270 c5590a89fccd1f019414aec75c752fd9 305 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 305 166.812 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RPIC_RS06405 9a1297a59538bdb3cc121b90d7d95788 167 Pfam PF07977 FabA-like domain 27 153 1.5E-37 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RPIC_RS06405 9a1297a59538bdb3cc121b90d7d95788 167 SUPERFAMILY SSF54637 18 161 1.01E-48 T 22-04-2016 IPR029069 HotDog domain RPIC_RS06405 9a1297a59538bdb3cc121b90d7d95788 167 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 18 160 34.844 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RPIC_RS06405 9a1297a59538bdb3cc121b90d7d95788 167 Gene3D G3DSA:3.10.129.10 17 159 1.8E-58 T 22-04-2016 IPR029069 HotDog domain RPIC_RS06405 9a1297a59538bdb3cc121b90d7d95788 167 PANTHER PTHR30272 18 162 3.6E-75 T 22-04-2016 RPIC_RS06405 9a1297a59538bdb3cc121b90d7d95788 167 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 18 157 5.9E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PANTHER PTHR10992:SF793 250 306 2.8E-81 T 22-04-2016 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PANTHER PTHR10992:SF793 11 177 2.8E-81 T 22-04-2016 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PANTHER PTHR10992:SF793 193 232 2.8E-81 T 22-04-2016 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 3.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 3.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 3.0E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 SUPERFAMILY SSF53474 13 307 8.86E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00412 Epoxide hydrolase signature 105 118 1.3E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00412 Epoxide hydrolase signature 284 306 1.3E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00412 Epoxide hydrolase signature 251 267 1.3E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00412 Epoxide hydrolase signature 119 132 1.3E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PRINTS PR00412 Epoxide hydrolase signature 40 58 1.3E-17 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 Pfam PF00561 alpha/beta hydrolase fold 34 295 5.6E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PANTHER PTHR10992 250 306 2.8E-81 T 22-04-2016 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PANTHER PTHR10992 11 177 2.8E-81 T 22-04-2016 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 PANTHER PTHR10992 193 232 2.8E-81 T 22-04-2016 RPIC_RS07110 668c0e769086b9112f185911d7e1ea01 308 Gene3D G3DSA:3.40.50.1820 10 307 1.9E-79 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 PANTHER PTHR11938 1 83 1.7E-35 T 22-04-2016 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 Gene3D G3DSA:3.30.70.20 4 104 8.4E-21 T 22-04-2016 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.1E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.1E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.1E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 Pfam PF11953 Domain of unknown function (DUF3470) 66 108 6.5E-19 T 22-04-2016 IPR022569 Ferredoxin, C-terminal RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 PANTHER PTHR11938:SF101 1 83 1.7E-35 T 22-04-2016 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 SUPERFAMILY SSF54862 3 84 1.09E-22 T 22-04-2016 RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 Pfam PF00037 4Fe-4S binding domain 34 56 1.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS04725 043316e0f8d02b038b38ada2384ffe36 109 Pfam PF12800 4Fe-4S binding domain 7 23 0.24 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 139 216 1.7E-22 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 PRINTS PR01374 Gram-negative bacterial tonB protein signature 155 173 4.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 PRINTS PR01374 Gram-negative bacterial tonB protein signature 76 86 4.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 PRINTS PR01374 Gram-negative bacterial tonB protein signature 134 155 4.0E-5 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 Gene3D G3DSA:3.30.1150.10 103 217 3.9E-17 T 22-04-2016 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 PANTHER PTHR33446 51 218 3.8E-16 T 22-04-2016 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 142 216 2.0E-17 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 PANTHER PTHR33446:SF2 51 218 3.8E-16 T 22-04-2016 RPIC_RS10410 ad9bb934d928a05a2dcd1bff0803511d 218 SUPERFAMILY SSF74653 103 217 1.47E-22 T 22-04-2016 RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 254 5.8E-94 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 PANTHER PTHR10804:SF75 1 254 3.1E-140 T 22-04-2016 RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 4.6E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 4.6E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 4.6E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 4.6E-16 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 SUPERFAMILY SSF55920 4 256 1.83E-89 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 Gene3D G3DSA:3.90.230.10 5 255 4.5E-96 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 Pfam PF00557 Metallopeptidase family M24 13 247 1.7E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 Hamap MF_01974 Methionine aminopeptidase [map]. 3 256 40.908 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 RPIC_RS06345 5993aa040071fbbbc88a0deb0f98cce9 274 PANTHER PTHR10804 1 254 3.1E-140 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920:SF1 239 308 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920:SF1 159 218 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920:SF1 1 28 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920:SF1 63 140 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920 239 308 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920 159 218 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920 1 28 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 PANTHER PTHR36920 63 140 7.0E-15 T 22-04-2016 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 Gene3D G3DSA:2.40.160.20 63 308 6.0E-60 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 Pfam PF03922 OmpW family 96 308 3.2E-21 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 SUPERFAMILY SSF56925 235 308 2.62E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 SUPERFAMILY SSF56925 164 207 2.62E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS02020 f35ecc025e24460f302a6f4a7d8dfda7 308 SUPERFAMILY SSF56925 94 136 2.62E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 SUPERFAMILY SSF46785 2 85 6.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 Pfam PF03466 LysR substrate binding domain 95 297 1.1E-26 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 SUPERFAMILY SSF53850 90 295 3.26E-46 T 22-04-2016 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 Gene3D G3DSA:3.40.190.10 90 172 1.5E-28 T 22-04-2016 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 Gene3D G3DSA:3.40.190.10 273 301 1.5E-28 T 22-04-2016 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 Gene3D G3DSA:1.10.10.10 1 86 5.2E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 PANTHER PTHR30118 1 307 1.0E-108 T 22-04-2016 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 8.7E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 Gene3D G3DSA:3.40.190.10 173 268 3.6E-31 T 22-04-2016 RPIC_RS10690 36b1faace1bf0f184bf5007914c9ac46 314 PANTHER PTHR30118:SF4 1 307 1.0E-108 T 22-04-2016 RPIC_RS06650 df1bdea30608abd4d876848434b46fb3 86 Pfam PF06945 Protein of unknown function (DUF1289) 28 71 3.3E-17 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RPIC_RS06650 df1bdea30608abd4d876848434b46fb3 86 PANTHER PTHR35175 25 73 5.6E-12 T 22-04-2016 RPIC_RS06650 df1bdea30608abd4d876848434b46fb3 86 PANTHER PTHR35175:SF2 25 73 5.6E-12 T 22-04-2016 RPIC_RS12475 cfb309ae4883c0ae1cb446cad0fba51a 131 PANTHER PTHR10374:SF8 3 126 1.1E-30 T 22-04-2016 RPIC_RS12475 cfb309ae4883c0ae1cb446cad0fba51a 131 PANTHER PTHR10374 3 126 1.1E-30 T 22-04-2016 RPIC_RS12475 cfb309ae4883c0ae1cb446cad0fba51a 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 1.1E-14 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS12475 cfb309ae4883c0ae1cb446cad0fba51a 131 Gene3D G3DSA:3.10.180.10 3 126 7.5E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS12475 cfb309ae4883c0ae1cb446cad0fba51a 131 SUPERFAMILY SSF54593 3 126 6.85E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS02405 26f7dc31eb7f96353521a1b02d952f39 298 PANTHER PTHR22911 6 296 2.4E-127 T 22-04-2016 RPIC_RS02405 26f7dc31eb7f96353521a1b02d952f39 298 PANTHER PTHR22911:SF41 6 296 2.4E-127 T 22-04-2016 RPIC_RS02405 26f7dc31eb7f96353521a1b02d952f39 298 SUPERFAMILY SSF103481 189 286 4.18E-8 T 22-04-2016 RPIC_RS02405 26f7dc31eb7f96353521a1b02d952f39 298 SUPERFAMILY SSF103481 47 145 2.09E-11 T 22-04-2016 RPIC_RS02405 26f7dc31eb7f96353521a1b02d952f39 298 Pfam PF00892 EamA-like transporter family 8 143 5.2E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS02405 26f7dc31eb7f96353521a1b02d952f39 298 TIGRFAM TIGR00688 rarD: protein RarD 7 260 4.6E-72 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 176 500 1.0E-19 T 22-04-2016 IPR005565 Haemolysin activator HlyB RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 PANTHER PTHR34597:SF2 33 563 1.7E-130 T 22-04-2016 RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 Gene3D G3DSA:3.10.20.310 73 150 3.2E-23 T 22-04-2016 RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 PANTHER PTHR34597 33 563 1.7E-130 T 22-04-2016 RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 PIRSF PIRSF029745 2 563 1.9E-126 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 Pfam PF08479 POTRA domain, ShlB-type 78 150 1.3E-18 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type RPIC_RS00055 b81b7a007370f60bd56372be90a87f58 563 Gene3D G3DSA:2.40.160.50 181 563 3.2E-103 T 22-04-2016 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 Gene3D G3DSA:1.10.10.60 63 122 1.4E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 SMART SM00342 26 110 6.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 SUPERFAMILY SSF55136 142 293 2.09E-30 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 Gene3D G3DSA:3.20.80.10 142 293 3.6E-36 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 Pfam PF06445 GyrI-like small molecule binding domain 141 293 7.3E-32 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 79 94 4.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 94 110 4.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 63 106 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 Pfam PF12833 Helix-turn-helix domain 32 111 3.0E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 SMART SM00871 140 293 1.1E-34 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 PANTHER PTHR40055:SF1 28 293 6.3E-48 T 22-04-2016 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 Gene3D G3DSA:1.10.10.60 6 62 5.6E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 SUPERFAMILY SSF46689 10 60 1.25E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 SUPERFAMILY SSF46689 62 118 1.12E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00155 f9029bc064c85fa9851959518f16adea 293 PANTHER PTHR40055 28 293 6.3E-48 T 22-04-2016 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 1.4E-64 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 PANTHER PTHR10314:SF100 1 298 1.4E-160 T 22-04-2016 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 9.3E-134 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 PANTHER PTHR10314 1 298 1.4E-160 T 22-04-2016 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 Gene3D G3DSA:3.40.50.1100 152 299 1.4E-78 T 22-04-2016 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 Gene3D G3DSA:3.40.50.1100 2 45 1.4E-78 T 22-04-2016 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 6.0E-116 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 SUPERFAMILY SSF53686 5 298 6.81E-88 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS03855 1f5f58e0c9eef82aed1d18f66fc87f00 300 Gene3D G3DSA:3.40.50.1100 46 146 2.7E-38 T 22-04-2016 RPIC_RS10485 725bfbf1eb03b7b6c6f3b2af478cf73d 286 Gene3D G3DSA:3.30.70.1070 208 284 8.8E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS10485 725bfbf1eb03b7b6c6f3b2af478cf73d 286 Pfam PF05036 Sporulation related domain 210 279 4.1E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS10485 725bfbf1eb03b7b6c6f3b2af478cf73d 286 SUPERFAMILY SSF110997 209 283 4.18E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 175 311 3.4E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 PANTHER PTHR10046 179 314 5.0E-22 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 Gene3D G3DSA:1.10.8.60 304 373 2.5E-4 T 22-04-2016 RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 PANTHER PTHR10046:SF47 179 314 5.0E-22 T 22-04-2016 RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 SUPERFAMILY SSF52540 170 376 1.58E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 Gene3D G3DSA:3.40.50.300 172 303 2.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08305 9140eb13cbd3c92348f80a33798dd484 406 SMART SM00382 171 316 2.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 175 311 3.4E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 PANTHER PTHR10046 179 314 5.0E-22 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 Gene3D G3DSA:1.10.8.60 304 373 2.5E-4 T 22-04-2016 RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 PANTHER PTHR10046:SF47 179 314 5.0E-22 T 22-04-2016 RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 SUPERFAMILY SSF52540 170 376 1.58E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 Gene3D G3DSA:3.40.50.300 172 303 2.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14415 9140eb13cbd3c92348f80a33798dd484 406 SMART SM00382 171 316 2.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13125 b312eac03335f022720d447382a6a020 281 SUPERFAMILY SSF52540 24 249 3.88E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13125 b312eac03335f022720d447382a6a020 281 Gene3D G3DSA:3.40.50.300 26 250 1.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13125 b312eac03335f022720d447382a6a020 281 PANTHER PTHR24220 26 267 8.8E-64 T 22-04-2016 RPIC_RS13125 b312eac03335f022720d447382a6a020 281 SMART SM00382 49 238 5.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13125 b312eac03335f022720d447382a6a020 281 PANTHER PTHR24220:SF266 26 267 8.8E-64 T 22-04-2016 RPIC_RS13125 b312eac03335f022720d447382a6a020 281 Pfam PF00005 ABC transporter 41 189 9.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS13125 b312eac03335f022720d447382a6a020 281 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS04855 76fd87cb8c4b0901131dfc29568ca760 207 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 4.6E-58 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC_RS04855 76fd87cb8c4b0901131dfc29568ca760 207 Pfam PF01300 Telomere recombination 22 198 8.8E-44 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 RPIC_RS04855 76fd87cb8c4b0901131dfc29568ca760 207 SUPERFAMILY SSF55821 1 202 1.68E-60 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC_RS04855 76fd87cb8c4b0901131dfc29568ca760 207 PANTHER PTHR17490 1 201 1.8E-83 T 22-04-2016 RPIC_RS04855 76fd87cb8c4b0901131dfc29568ca760 207 Gene3D G3DSA:3.90.870.10 2 202 9.7E-61 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC_RS04855 76fd87cb8c4b0901131dfc29568ca760 207 PANTHER PTHR17490:SF7 1 201 1.8E-83 T 22-04-2016 RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 Gene3D G3DSA:3.10.640.10 1 179 3.6E-84 T 22-04-2016 RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 SUPERFAMILY SSF52980 2 178 2.36E-74 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 PANTHER PTHR38784:SF1 1 182 1.8E-82 T 22-04-2016 RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 SMART SM01322 1 176 6.1E-122 T 22-04-2016 IPR009822 YaeQ RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 PANTHER PTHR38784 1 182 1.8E-82 T 22-04-2016 RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 Pfam PF07152 YaeQ protein 1 173 3.2E-80 T 22-04-2016 IPR009822 YaeQ RPIC_RS03585 e809db50627833a1a384ea86891f07b0 183 PIRSF PIRSF011484 1 181 3.8E-76 T 22-04-2016 IPR009822 YaeQ RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 442 6.6E-171 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 PANTHER PTHR10566 6 457 2.3E-228 T 22-04-2016 RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 PANTHER PTHR10566:SF79 6 457 2.3E-228 T 22-04-2016 RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 Pfam PF03109 ABC1 family 108 229 2.1E-32 T 22-04-2016 IPR004147 UbiB domain RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 Gene3D G3DSA:3.90.1200.10 245 317 6.5E-6 T 22-04-2016 RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 525 51.979 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 SUPERFAMILY SSF56112 192 435 4.25E-43 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS01645 5c744faac4f86e13edc175b8b4a2417e 525 SUPERFAMILY SSF56112 90 157 4.25E-43 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 PANTHER PTHR10992 1 269 7.6E-48 T 22-04-2016 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 PANTHER PTHR10992:SF818 1 269 7.6E-48 T 22-04-2016 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 Gene3D G3DSA:3.40.50.1820 8 268 1.4E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 SUPERFAMILY SSF53474 9 267 1.23E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 19 267 5.7E-77 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.0E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.0E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.0E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 3.0E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS00735 599563374ec1972b99863c4e783b210a 279 Pfam PF00561 alpha/beta hydrolase fold 29 254 2.2E-24 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS10085 47189f6a513e2532df03ef1de27e80e9 502 PANTHER PTHR30029 1 501 3.7E-214 T 22-04-2016 RPIC_RS10085 47189f6a513e2532df03ef1de27e80e9 502 Pfam PF04293 SpoVR like protein 9 445 8.6E-173 T 22-04-2016 IPR007390 Sporulation stage V, protein R RPIC_RS10085 47189f6a513e2532df03ef1de27e80e9 502 PANTHER PTHR30029:SF2 1 501 3.7E-214 T 22-04-2016 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 PANTHER PTHR11552:SF139 12 519 1.5E-98 T 22-04-2016 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 SUPERFAMILY SSF54373 291 458 1.88E-12 T 22-04-2016 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 SUPERFAMILY SSF51905 457 517 5.78E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 SUPERFAMILY SSF51905 12 309 5.78E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 PANTHER PTHR11552 12 519 1.5E-98 T 22-04-2016 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 Pfam PF05199 GMC oxidoreductase 390 508 4.8E-21 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 Gene3D G3DSA:3.50.50.60 417 516 4.2E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 Gene3D G3DSA:3.50.50.60 12 141 4.2E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 Gene3D G3DSA:3.50.50.60 199 305 4.2E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12485 a7cfc73b3c29dd81d05ef108308b2555 522 Pfam PF00732 GMC oxidoreductase 13 304 2.7E-22 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 Gene3D G3DSA:3.30.450.20 11 116 9.7E-22 T 22-04-2016 RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 SUPERFAMILY SSF55785 12 118 9.29E-21 T 22-04-2016 IPR000014 PAS domain RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 PANTHER PTHR24423 11 122 5.5E-14 T 22-04-2016 RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 185 5.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 121 2.0E-18 T 22-04-2016 IPR000014 PAS domain RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 SMART SM00421 130 187 5.0E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 Gene3D G3DSA:1.10.10.10 127 189 5.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 SMART SM00091 6 73 2.4E-12 T 22-04-2016 IPR000014 PAS domain RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 SUPERFAMILY SSF46894 120 188 3.1E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS11645 d89b6531c3e3498c999403bd94ec3c96 194 Pfam PF00989 PAS fold 12 94 1.3E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PANTHER PTHR22939:SF93 61 386 1.1E-136 T 22-04-2016 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 Gene3D G3DSA:2.40.10.10 61 179 1.2E-37 T 22-04-2016 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 Pfam PF13180 PDZ domain 291 380 4.9E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 Pfam PF13365 Trypsin-like peptidase domain 118 252 6.1E-35 T 22-04-2016 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 62 386 4.3E-132 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 SMART SM00228 291 373 4.6E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 SUPERFAMILY SSF50494 60 287 1.65E-66 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 Gene3D G3DSA:2.40.10.10 180 292 3.7E-43 T 22-04-2016 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PANTHER PTHR22939 61 386 1.1E-136 T 22-04-2016 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 Gene3D G3DSA:2.30.42.10 293 388 2.2E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 1.7E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 1.7E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 1.7E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 1.7E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 1.7E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 1.7E-56 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS15835 ff22870b9197220cf38c7b683349bae1 404 SUPERFAMILY SSF50156 250 374 3.02E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS23010 3459da25db7e087e3e38a219dfbb835e 237 SUPERFAMILY SSF47781 173 236 3.63E-5 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS23010 3459da25db7e087e3e38a219dfbb835e 237 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 57 208 2.0E-46 T 22-04-2016 IPR001162 UvrC family homology region RPIC_RS23010 3459da25db7e087e3e38a219dfbb835e 237 PANTHER PTHR30562:SF1 1 237 3.9E-74 T 22-04-2016 RPIC_RS23010 3459da25db7e087e3e38a219dfbb835e 237 PANTHER PTHR30562 1 237 3.9E-74 T 22-04-2016 RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 PANTHER PTHR13812 5 321 4.3E-46 T 22-04-2016 RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 PIRSF PIRSF001439 1 331 3.4E-49 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 SUPERFAMILY SSF51735 2 329 3.5E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 Gene3D G3DSA:3.40.50.720 136 314 4.4E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 Gene3D G3DSA:3.30.1780.10 2 135 1.4E-40 T 22-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 13 255 1.1E-29 T 22-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin RPIC_RS17580 ed78f1c88b99187f83854839beac61c4 333 PANTHER PTHR13812:SF19 5 321 4.3E-46 T 22-04-2016 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 SUPERFAMILY SSF53850 25 331 4.45E-99 T 22-04-2016 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 PANTHER PTHR30570:SF0 1 331 3.7E-138 T 22-04-2016 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 331 2.0E-131 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 PANTHER PTHR30570 1 331 3.7E-138 T 22-04-2016 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 Gene3D G3DSA:3.40.190.10 23 166 1.3E-55 T 22-04-2016 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 Pfam PF12849 PBP superfamily domain 24 302 1.0E-59 T 22-04-2016 IPR024370 PBP domain RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 PIRSF PIRSF002756 3 334 7.2E-108 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 RPIC_RS09975 63854e1ed472cbaabe1bd69103093278 343 Gene3D G3DSA:3.40.190.10 177 333 8.1E-32 T 22-04-2016 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Pfam PF01266 FAD dependent oxidoreductase 252 623 1.2E-41 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 SUPERFAMILY SSF51905 597 651 9.71E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 SUPERFAMILY SSF51905 252 468 9.71E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 PANTHER PTHR13847:SF206 214 650 8.5E-33 T 22-04-2016 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 252 650 4.9E-121 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 112 232 1.4E-42 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 8 648 24.599 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 PANTHER PTHR13847 214 650 8.5E-33 T 22-04-2016 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Gene3D G3DSA:3.50.50.60 250 322 1.6E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Gene3D G3DSA:3.50.50.60 384 467 1.6E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Gene3D G3DSA:3.50.50.60 582 654 1.6E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09180 aa160676eac2dbb1b042779aed090004 672 Gene3D G3DSA:3.40.50.150 14 240 1.5E-93 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS10480 bbc6b28b985a118cfe60970be8e3c897 165 PANTHER PTHR36926:SF1 4 142 4.6E-23 T 22-04-2016 RPIC_RS10480 bbc6b28b985a118cfe60970be8e3c897 165 PANTHER PTHR36926 4 142 4.6E-23 T 22-04-2016 RPIC_RS10480 bbc6b28b985a118cfe60970be8e3c897 165 Pfam PF02674 Colicin V production protein 6 148 3.0E-33 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 Gene3D G3DSA:1.20.1050.10 91 206 1.4E-47 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 SUPERFAMILY SSF47616 82 199 1.05E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 187 9.3E-6 T 22-04-2016 RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 PANTHER PTHR11260:SF144 7 197 4.3E-56 T 22-04-2016 RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 78 9.2E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 SUPERFAMILY SSF52833 7 90 5.72E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 Gene3D G3DSA:3.40.30.10 10 90 2.2E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS18170 4b93adfaf54fa30af124c3a504971cdd 229 PANTHER PTHR11260 7 197 4.3E-56 T 22-04-2016 RPIC_RS17150 4858255c83a1bef59d6a65ed7ad102cb 272 PANTHER PTHR34606:SF4 27 209 5.6E-34 T 22-04-2016 RPIC_RS17150 4858255c83a1bef59d6a65ed7ad102cb 272 SMART SM00749 143 206 7.6E-10 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RPIC_RS17150 4858255c83a1bef59d6a65ed7ad102cb 272 SMART SM00749 64 127 0.0051 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria RPIC_RS17150 4858255c83a1bef59d6a65ed7ad102cb 272 Pfam PF04972 BON domain 77 128 7.4E-10 T 22-04-2016 IPR007055 BON domain RPIC_RS17150 4858255c83a1bef59d6a65ed7ad102cb 272 Pfam PF04972 BON domain 138 203 6.2E-13 T 22-04-2016 IPR007055 BON domain RPIC_RS17150 4858255c83a1bef59d6a65ed7ad102cb 272 PANTHER PTHR34606 27 209 5.6E-34 T 22-04-2016 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 Gene3D G3DSA:1.10.1740.10 9 90 4.7E-22 T 22-04-2016 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 SUPERFAMILY SSF88659 107 166 1.12E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 Pfam PF04542 Sigma-70 region 2 12 48 1.4E-6 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 SUPERFAMILY SSF88946 10 95 6.28E-10 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 PANTHER PTHR30173 10 167 5.5E-32 T 22-04-2016 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 Pfam PF08281 Sigma-70, region 4 108 161 5.1E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 Gene3D G3DSA:1.10.10.10 104 166 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 165 5.0E-15 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS16100 7d6bcd6167aca6dd2b08cc113c1cead3 190 PANTHER PTHR30173:SF6 10 167 5.5E-32 T 22-04-2016 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 Gene3D G3DSA:1.25.40.80 165 302 3.2E-28 T 22-04-2016 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 SUPERFAMILY SSF48173 217 499 5.63E-102 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 PRINTS PR00147 DNA photolyase signature 160 176 6.0E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 PRINTS PR00147 DNA photolyase signature 405 419 6.0E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 PRINTS PR00147 DNA photolyase signature 366 384 6.0E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 PRINTS PR00147 DNA photolyase signature 346 362 6.0E-27 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 PANTHER PTHR11455:SF18 21 496 5.8E-172 T 22-04-2016 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 Pfam PF03441 FAD binding domain of DNA photolyase 293 495 1.1E-78 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 Gene3D G3DSA:1.10.579.10 303 497 3.0E-74 T 22-04-2016 RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 Gene3D G3DSA:3.40.50.620 19 164 7.7E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 Pfam PF00875 DNA photolyase 21 180 1.6E-45 T 22-04-2016 IPR006050 DNA photolyase, N-terminal RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 366 385 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 SUPERFAMILY SSF52425 19 201 2.35E-51 T 22-04-2016 IPR006050 DNA photolyase, N-terminal RPIC_RS03005 e4fe78bd47a23c736ab34b1ee60b7b12 518 PANTHER PTHR11455 21 496 5.8E-172 T 22-04-2016 RPIC_RS14730 110a124a4d78a77b174dfe574771dcd7 208 Pfam PF01081 KDPG and KHG aldolase 6 180 5.1E-27 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 RPIC_RS14730 110a124a4d78a77b174dfe574771dcd7 208 PANTHER PTHR30246 1 208 1.8E-71 T 22-04-2016 RPIC_RS14730 110a124a4d78a77b174dfe574771dcd7 208 Gene3D G3DSA:3.20.20.70 3 204 4.1E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS14730 110a124a4d78a77b174dfe574771dcd7 208 PANTHER PTHR30246:SF1 1 208 1.8E-71 T 22-04-2016 RPIC_RS14730 110a124a4d78a77b174dfe574771dcd7 208 SUPERFAMILY SSF51569 3 203 6.59E-56 T 22-04-2016 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Gene3D G3DSA:2.40.50.140 642 731 1.3E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SUPERFAMILY SSF47781 479 567 5.56E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 PANTHER PTHR10724 7 740 0.0 T 22-04-2016 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Gene3D G3DSA:1.10.3500.10 460 507 1.4E-99 T 22-04-2016 IPR023323 Tex-like domain RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Gene3D G3DSA:1.10.3500.10 114 330 1.4E-99 T 22-04-2016 IPR023323 Tex-like domain RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SUPERFAMILY SSF158832 6 329 9.15E-116 T 22-04-2016 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Pfam PF09371 Tex-like protein N-terminal domain 13 201 4.3E-70 T 22-04-2016 IPR018974 Tex-like protein, N-terminal RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SMART SM00732 334 433 1.3E-32 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Gene3D G3DSA:1.10.10.650 5 113 2.0E-46 T 22-04-2016 IPR023319 Tex-like protein, HTH domain RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SUPERFAMILY SSF53098 330 478 2.65E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Pfam PF00575 S1 RNA binding domain 658 729 2.3E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SUPERFAMILY SSF47781 569 641 6.45E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Pfam PF16921 Tex protein YqgF-like domain 334 460 1.5E-53 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 PANTHER PTHR10724:SF1 7 740 0.0 T 22-04-2016 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SUPERFAMILY SSF50249 646 733 8.95E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Gene3D G3DSA:3.30.420.140 334 459 4.0E-52 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Pfam PF12836 Helix-hairpin-helix motif 500 564 9.9E-29 T 22-04-2016 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 SMART SM00316 658 729 2.2E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS09440 6eed9fdd0fcb4470bfb2b8891dbb9f27 777 Gene3D G3DSA:1.10.150.310 508 639 8.0E-46 T 22-04-2016 IPR023097 Tex RuvX-like domain RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 SUPERFAMILY SSF52540 631 924 2.73E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:1.20.1580.10 91 129 1.4E-50 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:1.20.1580.10 415 489 1.4E-50 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:1.20.1580.10 259 292 1.4E-50 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 SUPERFAMILY SSF52540 3 204 3.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:1.20.1580.10 705 831 3.3E-54 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 936 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:3.40.50.300 832 949 8.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:3.40.50.300 490 608 5.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:3.40.50.300 3 51 5.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:3.40.50.300 613 691 8.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:3.30.1490.20 130 153 4.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:3.30.1490.20 210 258 4.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 PANTHER PTHR32282:SF2 1 183 0.0 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 PANTHER PTHR32282:SF2 200 954 0.0 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Gene3D G3DSA:1.10.8.280 295 414 3.5E-42 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 PANTHER PTHR32282 1 183 0.0 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 PANTHER PTHR32282 200 954 0.0 T 22-04-2016 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 951 22.316 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RPIC_RS01345 d2d175297a4fa45b3d34fe51c8f5eea9 954 SUPERFAMILY SSF52540 442 581 3.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 3.8E-28 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 PANTHER PTHR11938:SF8 1 31 6.2E-130 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 PANTHER PTHR11938:SF8 170 336 6.2E-130 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 PANTHER PTHR11938:SF8 134 143 6.2E-130 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Pfam PF13247 4Fe-4S dicluster domain 175 271 3.4E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:3.30.70.20 125 126 1.6E-11 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:3.30.70.20 174 195 1.6E-11 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 SUPERFAMILY SSF54862 1 489 5.44E-182 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:3.30.70.20 236 358 4.7E-77 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:3.30.70.20 436 465 4.7E-77 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:3.30.70.20 196 235 4.5E-25 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:1.10.3650.10 359 434 5.1E-28 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 Gene3D G3DSA:3.30.70.20 5 57 5.9E-11 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 488 6.5E-297 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 PANTHER PTHR11938 1 31 6.2E-130 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 PANTHER PTHR11938 170 336 6.2E-130 T 22-04-2016 RPIC_RS12415 a316bdca0f0acdd49d5b0e3ed5aab099 508 PANTHER PTHR11938 134 143 6.2E-130 T 22-04-2016 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 SUPERFAMILY SSF46626 31 107 5.32E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 Pfam PF00034 Cytochrome c 31 107 9.5E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 PRINTS PR00606 Class ID cytochrome C signature 47 60 1.1E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 PRINTS PR00606 Class ID cytochrome C signature 85 95 1.1E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 PRINTS PR00606 Class ID cytochrome C signature 97 107 1.1E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 PRINTS PR00606 Class ID cytochrome C signature 70 83 1.1E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 PRINTS PR00606 Class ID cytochrome C signature 32 45 1.1E-20 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12290 a6705753ff1b562f64c54566e770ce9c 110 Gene3D G3DSA:1.10.760.10 28 107 5.9E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 SMART SM00028 180 213 0.31 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 SMART SM00028 214 247 490.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 SMART SM00028 36 69 50.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 Pfam PF13432 Tetratricopeptide repeat 43 90 4.8E-4 T 22-04-2016 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 Pfam PF13432 Tetratricopeptide repeat 186 236 0.0062 T 22-04-2016 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 Gene3D G3DSA:1.25.40.10 40 273 8.1E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 SUPERFAMILY SSF48452 40 93 4.74E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 SUPERFAMILY SSF48452 155 237 4.74E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 415 33.812 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 PANTHER PTHR23083 1 242 1.3E-13 T 22-04-2016 RPIC_RS03830 ce2867c6d6246bffec384d936dec8c56 424 PANTHER PTHR23083 398 402 1.3E-13 T 22-04-2016 RPIC_RS07690 acf431681d8a4c5bea4a1291b98a3ecf 395 Gene3D G3DSA:1.10.443.10 159 325 1.9E-8 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS07690 acf431681d8a4c5bea4a1291b98a3ecf 395 Gene3D G3DSA:1.10.10.60 345 380 1.3E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07690 acf431681d8a4c5bea4a1291b98a3ecf 395 Pfam PF12834 Phage integrase, N-terminal 50 121 1.0E-5 T 22-04-2016 IPR024457 Putative integrase, N-terminal RPIC_RS07690 acf431681d8a4c5bea4a1291b98a3ecf 395 SUPERFAMILY SSF56349 163 287 3.24E-9 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS07690 acf431681d8a4c5bea4a1291b98a3ecf 395 Pfam PF12835 Integrase 154 282 1.0E-13 T 22-04-2016 IPR024456 Integrase catalytic domain, putative RPIC_RS07690 acf431681d8a4c5bea4a1291b98a3ecf 395 Pfam PF02954 Bacterial regulatory protein, Fis family 346 378 7.6E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS10175 07ef38d5c4dbcc1b3f96262d6461a523 97 Gene3D G3DSA:1.10.10.60 8 91 1.4E-26 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS10175 07ef38d5c4dbcc1b3f96262d6461a523 97 Pfam PF01527 Transposase 1 76 2.2E-20 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS10175 07ef38d5c4dbcc1b3f96262d6461a523 97 PANTHER PTHR33215 1 96 1.3E-37 T 22-04-2016 RPIC_RS10175 07ef38d5c4dbcc1b3f96262d6461a523 97 SUPERFAMILY SSF46689 3 95 8.06E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07280 05db908bfd1ced3695a9129da5e6e7d1 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 267 4.5E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07280 05db908bfd1ced3695a9129da5e6e7d1 278 SUPERFAMILY SSF161098 17 271 4.39E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07280 05db908bfd1ced3695a9129da5e6e7d1 278 PANTHER PTHR30193 16 271 2.5E-79 T 22-04-2016 RPIC_RS07280 05db908bfd1ced3695a9129da5e6e7d1 278 PANTHER PTHR30193:SF20 16 271 2.5E-79 T 22-04-2016 RPIC_RS07280 05db908bfd1ced3695a9129da5e6e7d1 278 Gene3D G3DSA:1.10.3720.10 22 273 6.5E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14110 d5c6a080dfed8eb6922bf4d83d60d0c9 214 PIRSF PIRSF000705 1 208 3.1E-50 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RPIC_RS14110 d5c6a080dfed8eb6922bf4d83d60d0c9 214 Pfam PF01712 Deoxynucleoside kinase 9 200 4.1E-29 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain RPIC_RS14110 d5c6a080dfed8eb6922bf4d83d60d0c9 214 Gene3D G3DSA:3.40.50.300 7 201 4.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14110 d5c6a080dfed8eb6922bf4d83d60d0c9 214 SUPERFAMILY SSF52540 6 204 1.97E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14110 d5c6a080dfed8eb6922bf4d83d60d0c9 214 PANTHER PTHR10513 9 202 2.3E-29 T 22-04-2016 RPIC_RS14110 d5c6a080dfed8eb6922bf4d83d60d0c9 214 PANTHER PTHR10513:SF16 9 202 2.3E-29 T 22-04-2016 RPIC_RS10590 3000f1a4db54a52c5090cf42a81b8c92 326 SUPERFAMILY SSF51621 32 262 3.04E-42 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS10590 3000f1a4db54a52c5090cf42a81b8c92 326 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 46 252 8.5E-13 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RPIC_RS10590 3000f1a4db54a52c5090cf42a81b8c92 326 PIRSF PIRSF015582 32 323 1.1E-47 T 22-04-2016 IPR011206 Citrate lyase beta subunit-like RPIC_RS10590 3000f1a4db54a52c5090cf42a81b8c92 326 Gene3D G3DSA:3.20.20.60 26 262 3.5E-47 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS10590 3000f1a4db54a52c5090cf42a81b8c92 326 PANTHER PTHR11105 2 325 1.0E-49 T 22-04-2016 RPIC_RS06425 58d9933f518d5ad746710168daaa09fd 260 Gene3D G3DSA:3.40.1280.10 115 258 3.0E-47 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS06425 58d9933f518d5ad746710168daaa09fd 260 SUPERFAMILY SSF75217 114 258 2.16E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS06425 58d9933f518d5ad746710168daaa09fd 260 Gene3D G3DSA:3.30.1330.30 3 102 4.7E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC_RS06425 58d9933f518d5ad746710168daaa09fd 260 PANTHER PTHR12029 24 258 6.7E-46 T 22-04-2016 RPIC_RS06425 58d9933f518d5ad746710168daaa09fd 260 Pfam PF00588 SpoU rRNA Methylase family 116 251 1.0E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RPIC_RS06425 58d9933f518d5ad746710168daaa09fd 260 SUPERFAMILY SSF55315 2 102 1.86E-16 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 PANTHER PTHR30195:SF15 54 690 1.4E-139 T 22-04-2016 RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 PANTHER PTHR30195 54 690 1.4E-139 T 22-04-2016 RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 SUPERFAMILY SSF52540 254 494 1.76E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 40 690 7.5E-153 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 43 222 6.3E-25 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 Gene3D G3DSA:3.40.50.300 284 450 8.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 SMART SM00487 283 473 3.6E-10 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS15650 dc1f7dd20583ffead2a62ef8d0526075 995 Pfam PF04851 Type III restriction enzyme, res subunit 287 444 1.2E-17 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 Pfam PF00814 Glycoprotease family 35 132 3.8E-25 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 SUPERFAMILY SSF53067 111 219 9.71E-17 T 22-04-2016 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 221 5.7E-54 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 PANTHER PTHR11735 4 129 7.9E-32 T 22-04-2016 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 SUPERFAMILY SSF53067 3 104 2.91E-25 T 22-04-2016 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 Gene3D G3DSA:3.30.420.40 3 129 3.8E-38 T 22-04-2016 RPIC_RS06160 e2a657fc30de56e277e4a448eeb48a7f 246 PANTHER PTHR11735:SF11 4 129 7.9E-32 T 22-04-2016 RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 SUPERFAMILY SSF52540 5 206 5.48E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 268 361 4.7E-21 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 SMART SM00833 268 361 3.3E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 SUPERFAMILY SSF90002 268 361 5.89E-26 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 PANTHER PTHR13748:SF43 1 213 2.2E-124 T 22-04-2016 RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 PANTHER PTHR13748:SF43 243 362 2.2E-124 T 22-04-2016 RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 186 4.5E-55 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 Gene3D G3DSA:3.30.1220.10 245 362 2.2E-34 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 Gene3D G3DSA:3.40.50.300 3 205 2.7E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 PANTHER PTHR13748 1 213 2.2E-124 T 22-04-2016 RPIC_RS18370 6e57765a668e156e44ccdf48e3a0fdad 362 PANTHER PTHR13748 243 362 2.2E-124 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 SUPERFAMILY SSF53756 17 402 6.28E-59 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 SUPERFAMILY SSF53756 872 1211 1.2E-38 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 PANTHER PTHR12526 19 83 1.0E-44 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 PANTHER PTHR12526 102 407 1.0E-44 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 Pfam PF00534 Glycosyl transferases group 1 1067 1210 1.3E-22 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 Pfam PF00534 Glycosyl transferases group 1 616 754 1.0E-8 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 Pfam PF00534 Glycosyl transferases group 1 225 383 1.9E-29 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 Gene3D G3DSA:3.40.50.2000 1067 1209 6.7E-15 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 Gene3D G3DSA:3.40.50.2000 212 383 8.4E-21 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 Pfam PF13439 Glycosyltransferase Family 4 19 204 4.9E-7 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 SUPERFAMILY SSF53756 423 530 1.88E-31 T 22-04-2016 RPIC_RS05750 bab0228f11e05526ab463c1226630ff7 1236 SUPERFAMILY SSF53756 564 806 1.88E-31 T 22-04-2016 RPIC_RS00040 26fa66e3135de01e2a20b179e0eff41a 112 PANTHER PTHR33215:SF3 5 111 4.3E-24 T 22-04-2016 RPIC_RS00040 26fa66e3135de01e2a20b179e0eff41a 112 Gene3D G3DSA:1.10.10.60 13 99 4.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00040 26fa66e3135de01e2a20b179e0eff41a 112 Pfam PF01527 Transposase 10 91 5.4E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS00040 26fa66e3135de01e2a20b179e0eff41a 112 PANTHER PTHR33215 5 111 4.3E-24 T 22-04-2016 RPIC_RS00040 26fa66e3135de01e2a20b179e0eff41a 112 SUPERFAMILY SSF46689 10 103 2.69E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS08955 26fa66e3135de01e2a20b179e0eff41a 112 PANTHER PTHR33215:SF3 5 111 4.3E-24 T 22-04-2016 RPIC_RS08955 26fa66e3135de01e2a20b179e0eff41a 112 Gene3D G3DSA:1.10.10.60 13 99 4.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS08955 26fa66e3135de01e2a20b179e0eff41a 112 Pfam PF01527 Transposase 10 91 5.4E-8 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS08955 26fa66e3135de01e2a20b179e0eff41a 112 PANTHER PTHR33215 5 111 4.3E-24 T 22-04-2016 RPIC_RS08955 26fa66e3135de01e2a20b179e0eff41a 112 SUPERFAMILY SSF46689 10 103 2.69E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 PANTHER PTHR11751 92 114 1.7E-22 T 22-04-2016 RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 PANTHER PTHR11751 8 70 1.7E-22 T 22-04-2016 RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 8.2E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 SMART SM00345 8 67 2.3E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 SUPERFAMILY SSF46785 6 71 2.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 Gene3D G3DSA:1.20.120.530 96 226 2.2E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 Pfam PF07729 FCD domain 98 220 2.6E-24 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 Gene3D G3DSA:1.10.10.10 5 68 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 SMART SM00895 98 222 1.0E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 SUPERFAMILY SSF48008 96 226 7.59E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.6E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS00065 018c7327abca22e2bf86f5289f1fd11d 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.6E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS15075 ccb3c9344a5f44b36160a8abb792e9ad 253 Pfam PF01464 Transglycosylase SLT domain 98 189 7.9E-18 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS15075 ccb3c9344a5f44b36160a8abb792e9ad 253 Gene3D G3DSA:1.10.530.10 98 203 1.5E-26 T 22-04-2016 RPIC_RS15075 ccb3c9344a5f44b36160a8abb792e9ad 253 SUPERFAMILY SSF53955 90 208 1.54E-29 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS15075 ccb3c9344a5f44b36160a8abb792e9ad 253 PANTHER PTHR21666 82 188 5.6E-16 T 22-04-2016 RPIC_RS07345 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678:SF1 6 501 7.2E-102 T 22-04-2016 RPIC_RS07345 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678 6 501 7.2E-102 T 22-04-2016 RPIC_RS07345 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF03050 Transposase IS66 family 177 458 7.2E-104 T 22-04-2016 IPR004291 Transposase, IS66 RPIC_RS07345 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13817 IS66 C-terminal element 465 502 4.9E-18 T 22-04-2016 RPIC_RS07345 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13007 Transposase C of IS166 homeodomain 42 114 3.6E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RPIC_RS07345 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 122 163 9.5E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RPIC_RS05805 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678:SF1 6 501 7.2E-102 T 22-04-2016 RPIC_RS05805 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678 6 501 7.2E-102 T 22-04-2016 RPIC_RS05805 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF03050 Transposase IS66 family 177 458 7.2E-104 T 22-04-2016 IPR004291 Transposase, IS66 RPIC_RS05805 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13817 IS66 C-terminal element 465 502 4.9E-18 T 22-04-2016 RPIC_RS05805 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13007 Transposase C of IS166 homeodomain 42 114 3.6E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RPIC_RS05805 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 122 163 9.5E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RPIC_RS16425 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678:SF1 6 501 7.2E-102 T 22-04-2016 RPIC_RS16425 790fca5cd6f9a7c68fe17542e3b837ca 509 PANTHER PTHR33678 6 501 7.2E-102 T 22-04-2016 RPIC_RS16425 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF03050 Transposase IS66 family 177 458 7.2E-104 T 22-04-2016 IPR004291 Transposase, IS66 RPIC_RS16425 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13817 IS66 C-terminal element 465 502 4.9E-18 T 22-04-2016 RPIC_RS16425 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13007 Transposase C of IS166 homeodomain 42 114 3.6E-15 T 22-04-2016 IPR024463 Transposase TnpC, homeodomain RPIC_RS16425 790fca5cd6f9a7c68fe17542e3b837ca 509 Pfam PF13005 zinc-finger binding domain of transposase IS66 122 163 9.5E-13 T 22-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 SUPERFAMILY SSF56219 2 256 5.37E-73 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 Gene3D G3DSA:3.60.10.10 1 256 8.5E-91 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 PANTHER PTHR22748 1 256 4.3E-95 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 253 2.1E-71 T 22-04-2016 RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 255 6.0E-76 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC_RS00195 e010069d879a4d63e0f46eb968f43c14 261 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 248 1.0E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 Gene3D G3DSA:3.40.50.2300 2 124 3.2E-35 T 22-04-2016 RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 SMART SM00862 151 227 7.6E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 5.3E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 SMART SM00448 3 115 4.0E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 Gene3D G3DSA:1.10.10.10 130 229 5.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 SUPERFAMILY SSF52172 3 183 7.68E-35 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 PANTHER PTHR26402:SF316 3 228 6.7E-61 T 22-04-2016 RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 Pfam PF00072 Response regulator receiver domain 5 115 2.1E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS04635 fef2635a4cd92a69ffad97bb8595b541 237 PANTHER PTHR26402 3 228 6.7E-61 T 22-04-2016 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 PANTHER PTHR30204 1 124 4.7E-41 T 22-04-2016 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 SUPERFAMILY SSF46955 5 120 1.54E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 SMART SM00422 5 74 8.8E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 PANTHER PTHR30204:SF2 1 124 4.7E-41 T 22-04-2016 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.1E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 1.1E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.1E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 Pfam PF13411 MerR HTH family regulatory protein 6 70 4.8E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 Gene3D G3DSA:1.10.1660.10 3 58 5.7E-24 T 22-04-2016 RPIC_RS12215 ec59fa09230114fb3787c26cb290a7c0 185 Gene3D G3DSA:1.10.1660.10 59 111 2.2E-5 T 22-04-2016 RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 14 235 7.0E-101 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 PANTHER PTHR40279 10 234 1.2E-107 T 22-04-2016 RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 237 130.863 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 Gene3D G3DSA:1.20.910.10 10 235 1.4E-109 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 Pfam PF03070 TENA/THI-4/PQQC family 20 228 7.8E-56 T 22-04-2016 IPR004305 Thiaminase-2/PQQC RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 SUPERFAMILY SSF48613 10 235 1.82E-73 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RPIC_RS01415 d04e0a112febc5a16dee99d2cfc557e6 237 PANTHER PTHR40279:SF2 10 234 1.2E-107 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 413 660 5.2E-45 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 115 393 9.6E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 595 607 6.2E-24 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 212 6.2E-24 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 529 6.2E-24 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 572 591 6.2E-24 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 6.2E-24 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 52 736 40.687 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF81653 158 251 1.57E-20 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Pfam PF00122 E1-E2 ATPase 116 346 1.7E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PANTHER PTHR24093 52 643 0.0 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PANTHER PTHR24093 681 738 0.0 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Gene3D G3DSA:3.40.50.1000 505 619 3.0E-35 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Gene3D G3DSA:3.40.50.1000 341 367 3.0E-35 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Gene3D G3DSA:2.70.150.10 90 252 4.8E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF81660 366 506 3.92E-30 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Pfam PF00702 haloacid dehalogenase-like hydrolase 351 586 7.0E-35 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF56784 414 460 1.01E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF56784 343 367 1.01E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF56784 491 614 1.01E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 48 732 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 357 363 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF81665 252 349 1.44E-13 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF81665 675 720 1.44E-13 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 SUPERFAMILY SSF81665 71 147 1.44E-13 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PANTHER PTHR24093:SF49 52 643 0.0 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 PANTHER PTHR24093:SF49 681 738 0.0 T 22-04-2016 RPIC_RS17805 f289c21610942a51ee735faa4c3365c7 738 Gene3D G3DSA:3.40.1110.10 368 504 1.1E-44 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 Pfam PF00171 Aldehyde dehydrogenase family 20 479 6.2E-173 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 Gene3D G3DSA:3.40.309.10 262 454 6.7E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 SUPERFAMILY SSF53720 6 485 4.58E-167 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 PANTHER PTHR11699 9 491 1.1E-266 T 22-04-2016 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 9 492 3.8E-222 T 22-04-2016 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 KEGG: 00010+1.2.1.-|KEGG: 00220+1.2.1.-|KEGG: 00260+1.2.1.-|KEGG: 00281+1.2.1.-|KEGG: 00300+1.2.1.-|KEGG: 00330+1.2.1.-|KEGG: 00380+1.2.1.-|KEGG: 00620+1.2.1.-|KEGG: 00624+1.2.1.-|KEGG: 00626+1.2.1.-|KEGG: 00640+1.2.1.-|KEGG: 00903+1.2.1.-|UniPathway: UPA00208 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 Gene3D G3DSA:3.40.605.10 8 261 5.3E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS09620 3d970846f209a474ae9926ef833bb296 493 PANTHER PTHR11699:SF213 9 491 1.1E-266 T 22-04-2016 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 PIRSF PIRSF000137 1 540 5.6E-154 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 SUPERFAMILY SSF51905 472 533 6.96E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 SUPERFAMILY SSF51905 3 288 6.96E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 PANTHER PTHR11552:SF51 2 542 2.5E-218 T 22-04-2016 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 SUPERFAMILY SSF54373 290 473 4.81E-62 T 22-04-2016 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 Pfam PF00732 GMC oxidoreductase 4 295 1.2E-79 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 Gene3D G3DSA:3.50.50.60 187 313 8.9E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 Gene3D G3DSA:3.50.50.60 2 126 8.9E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 Gene3D G3DSA:3.50.50.60 466 533 8.9E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 PANTHER PTHR11552 2 542 2.5E-218 T 22-04-2016 RPIC_RS17550 52f7d78919981e1687cfe91fd2fffa60 544 Pfam PF05199 GMC oxidoreductase 387 525 3.3E-41 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 12 244 6.3E-93 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 12 244 8.8E-100 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 SUPERFAMILY SSF63892 10 246 6.93E-96 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 PANTHER PTHR30456:SF0 8 251 4.5E-132 T 22-04-2016 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 249 123.886 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 Gene3D G3DSA:3.20.20.70 10 247 1.2E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS04580 3c185e8d6940ce039e48a0ed63f6c2fb 263 PANTHER PTHR30456 8 251 4.5E-132 T 22-04-2016 RPIC_RS14090 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 Gene3D G3DSA:1.10.8.60 165 229 1.1E-26 T 22-04-2016 RPIC_RS14090 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 Gene3D G3DSA:3.40.50.300 3 161 8.7E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14090 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 PANTHER PTHR30050 4 229 3.8E-42 T 22-04-2016 RPIC_RS14090 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 230 8.4E-75 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 RPIC_RS14090 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 SUPERFAMILY SSF52540 16 210 3.47E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14090 3893b9f0ae98dc68cb0ad9e4c1900c2e 233 PANTHER PTHR30050:SF5 4 229 3.8E-42 T 22-04-2016 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 SUPERFAMILY SSF55681 21 235 3.81E-39 T 22-04-2016 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 PANTHER PTHR12835 70 286 6.5E-41 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 Pfam PF03099 Biotin/lipoate A/B protein ligase family 70 175 8.8E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 69 286 3.7E-40 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 Gene3D G3DSA:3.30.930.10 21 237 1.3E-45 T 22-04-2016 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 Pfam PF02237 Biotin protein ligase C terminal domain 240 286 1.4E-12 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 SUPERFAMILY SSF50037 240 286 1.01E-7 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal RPIC_RS00810 99702aa13662c56dfa89b3815f1cf00f 293 Gene3D G3DSA:2.30.30.100 239 289 1.7E-16 T 22-04-2016 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 112 3.6E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 161 174 3.6E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 267 281 3.6E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 147 160 3.6E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00412 Epoxide hydrolase signature 298 320 3.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00412 Epoxide hydrolase signature 265 281 3.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00412 Epoxide hydrolase signature 147 160 3.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00412 Epoxide hydrolase signature 78 96 3.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PRINTS PR00412 Epoxide hydrolase signature 161 174 3.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 PANTHER PTHR10992 45 323 2.7E-52 T 22-04-2016 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 Gene3D G3DSA:3.40.50.1820 47 322 3.6E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 Pfam PF12697 Alpha/beta hydrolase family 74 313 5.8E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS16645 e5e3aec9169fcc848e1cfe0c5ab1cf61 340 SUPERFAMILY SSF53474 46 322 8.86E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 SUPERFAMILY SSF47027 3 85 3.79E-26 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 PANTHER PTHR23310 1 84 1.9E-30 T 22-04-2016 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 2.2E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 2.2E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 2.2E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 2.2E-18 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 Pfam PF00887 Acyl CoA binding protein 5 84 7.8E-24 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 RPIC_RS06155 ff6b3a6b2d4e4223b17e5559592499df 89 Gene3D G3DSA:1.20.80.10 1 85 1.8E-28 T 22-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 7.4E-58 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 SUPERFAMILY SSF54826 1 112 4.46E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 85.627 T 22-04-2016 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6|UniPathway: UPA00081 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 8.3E-30 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 SUPERFAMILY SSF51604 95 357 1.7E-75 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 PANTHER PTHR13794 1 382 4.7E-154 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 Gene3D G3DSA:3.30.390.10 1 116 2.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 Gene3D G3DSA:3.20.20.120 117 343 2.4E-81 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 PANTHER PTHR13794:SF4 1 382 4.7E-154 T 22-04-2016 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 RPIC_RS14725 f2ca52270030d2383b286bc560258ba4 382 SMART SM00922 125 230 6.1E-20 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 Pfam PF12019 Type II transport protein GspH 49 151 2.1E-6 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 12 152 1.4E-23 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 1.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 Gene3D G3DSA:3.30.700.10 14 36 4.1E-4 T 22-04-2016 RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 Pfam PF13633 Prokaryotic N-terminal methylation site 12 33 4.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 SUPERFAMILY SSF54523 14 94 4.79E-14 T 22-04-2016 RPIC_RS16795 b9e1ca74cc58f046cf025ec7523ccf92 164 Gene3D G3DSA:3.55.40.10 44 107 2.3E-5 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 PIRSF PIRSF001394 1 506 1.9E-220 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 Gene3D G3DSA:3.20.130.10 303 489 3.2E-72 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 PANTHER PTHR30389 1 507 0.0 T 22-04-2016 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 489 3.8E-47 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.7E-65 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.8E-101 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 Pfam PF05683 Fumarase C-terminus 289 490 2.9E-82 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 SUPERFAMILY SSF117457 319 489 1.18E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 RPIC_RS10340 0c338207a6cec27b766aa61ac3a5e6e6 507 PANTHER PTHR30389:SF1 1 507 0.0 T 22-04-2016 RPIC_RS18360 439d547cc5c45e2c5441ef27994b55f7 412 PANTHER PTHR30344:SF1 6 410 2.3E-92 T 22-04-2016 RPIC_RS18360 439d547cc5c45e2c5441ef27994b55f7 412 Pfam PF10282 Lactonase, 7-bladed beta-propeller 51 410 1.3E-100 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC_RS18360 439d547cc5c45e2c5441ef27994b55f7 412 PANTHER PTHR30344 6 410 2.3E-92 T 22-04-2016 RPIC_RS18360 439d547cc5c45e2c5441ef27994b55f7 412 SUPERFAMILY SSF51004 72 411 6.67E-42 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RPIC_RS18360 439d547cc5c45e2c5441ef27994b55f7 412 Gene3D G3DSA:2.130.10.10 50 410 1.5E-99 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS09410 8920ecbc55aea787d20356e90212ece9 269 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 44 267 2.0E-49 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RPIC_RS09410 8920ecbc55aea787d20356e90212ece9 269 Gene3D G3DSA:3.60.140.10 5 267 5.1E-90 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RPIC_RS09410 8920ecbc55aea787d20356e90212ece9 269 PANTHER PTHR30616:SF3 7 269 4.9E-103 T 22-04-2016 RPIC_RS09410 8920ecbc55aea787d20356e90212ece9 269 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 266 3.0E-69 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase RPIC_RS09410 8920ecbc55aea787d20356e90212ece9 269 SUPERFAMILY SSF64438 6 267 4.21E-75 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic RPIC_RS09410 8920ecbc55aea787d20356e90212ece9 269 PANTHER PTHR30616 7 269 4.9E-103 T 22-04-2016 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 Gene3D G3DSA:3.40.50.2300 1 120 3.4E-35 T 22-04-2016 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 SMART SM00448 1 112 1.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 SMART SM00862 149 230 4.7E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 PANTHER PTHR26402 1 232 1.7E-69 T 22-04-2016 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 SUPERFAMILY SSF46894 128 231 5.35E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 Gene3D G3DSA:1.10.10.10 126 232 6.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 230 6.1E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 SUPERFAMILY SSF52172 1 118 6.55E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 PANTHER PTHR26402:SF578 1 232 1.7E-69 T 22-04-2016 RPIC_RS17610 fa18151b5cd13b17b2c8e49fe8d41d3b 236 Pfam PF00072 Response regulator receiver domain 3 112 2.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 PRINTS PR01270 Histone deacetylase superfamily signature 128 151 4.3E-7 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 PRINTS PR01270 Histone deacetylase superfamily signature 240 250 4.3E-7 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 SUPERFAMILY SSF52768 17 297 5.76E-77 T 22-04-2016 RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 Gene3D G3DSA:3.40.800.20 18 308 4.6E-63 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 PANTHER PTHR10625 22 308 1.2E-109 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 Pfam PF00850 Histone deacetylase domain 55 298 2.4E-49 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC_RS09535 0ac077d00941fc31f09a103df0e1f7dd 334 PANTHER PTHR10625:SF131 22 308 1.2E-109 T 22-04-2016 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 PANTHER PTHR30055 9 244 2.5E-33 T 22-04-2016 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 SUPERFAMILY SSF48498 91 212 3.86E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 SUPERFAMILY SSF46689 11 92 3.49E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 Pfam PF16859 Bacterial transcriptional repressor C-terminal 97 181 7.7E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 9.5E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 9.5E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 2.0E-18 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 Gene3D G3DSA:1.10.10.60 12 68 9.4E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS03160 af5349c7d7b681eaa446a4759a0b613d 247 Gene3D G3DSA:1.10.357.10 69 212 4.4E-25 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 Gene3D G3DSA:3.40.50.300 8 235 1.4E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 PANTHER PTHR24220:SF509 10 236 4.9E-98 T 22-04-2016 RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 Pfam PF00005 ABC transporter 28 177 6.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 SUPERFAMILY SSF52540 8 234 1.52E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 SMART SM00382 37 230 1.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 PANTHER PTHR24220 10 236 4.9E-98 T 22-04-2016 RPIC_RS09125 92582ac9464ee43c29ba5d4e4928f520 236 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 PANTHER PTHR30136:SF7 4 265 3.4E-60 T 22-04-2016 RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 Gene3D G3DSA:3.30.450.40 81 258 1.7E-49 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 SUPERFAMILY SSF46785 13 84 1.13E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 Gene3D G3DSA:1.10.10.10 6 80 8.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 PANTHER PTHR30136 4 265 3.4E-60 T 22-04-2016 RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 Pfam PF09339 IclR helix-turn-helix domain 16 65 1.8E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 SUPERFAMILY SSF55781 70 255 2.16E-43 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 SMART SM00346 13 102 2.0E-22 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS09510 54a95215990e48bc010dc5270ba1ba66 265 Pfam PF01614 Bacterial transcriptional regulator 131 251 5.2E-32 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC_RS02190 3179627ce6b08d4720f5d4df8a1ebbba 435 PANTHER PTHR30408 224 427 1.9E-22 T 22-04-2016 RPIC_RS02190 3179627ce6b08d4720f5d4df8a1ebbba 435 PANTHER PTHR30408:SF2 224 427 1.9E-22 T 22-04-2016 RPIC_RS02190 3179627ce6b08d4720f5d4df8a1ebbba 435 SUPERFAMILY SSF116734 226 427 1.62E-41 T 22-04-2016 RPIC_RS02190 3179627ce6b08d4720f5d4df8a1ebbba 435 Pfam PF01420 Type I restriction modification DNA specificity domain 240 416 6.1E-20 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RPIC_RS02190 3179627ce6b08d4720f5d4df8a1ebbba 435 Pfam PF01420 Type I restriction modification DNA specificity domain 88 204 1.7E-5 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RPIC_RS02190 3179627ce6b08d4720f5d4df8a1ebbba 435 SUPERFAMILY SSF116734 19 222 9.81E-27 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 Gene3D G3DSA:1.10.150.130 359 458 3.3E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 Pfam PF12482 Phage integrase protein 180 270 9.2E-27 T 22-04-2016 IPR022169 Protein of unknown function DUF3701 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 Pfam PF00589 Phage integrase family 485 688 1.4E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 PANTHER PTHR30349:SF20 612 686 1.1E-26 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 PANTHER PTHR30349:SF20 426 587 1.1E-26 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 PANTHER PTHR30349:SF20 361 403 1.1E-26 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 PANTHER PTHR30349 612 686 1.1E-26 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 PANTHER PTHR30349 426 587 1.1E-26 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 PANTHER PTHR30349 361 403 1.1E-26 T 22-04-2016 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 Gene3D G3DSA:1.10.443.10 476 688 4.0E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS07455 679a2b45eea1d90f6d61e0c4fc691790 704 SUPERFAMILY SSF56349 361 688 1.29E-30 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 21 155 3.7E-61 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 Pfam PF13633 Prokaryotic N-terminal methylation site 21 44 7.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 PRINTS PR00813 Bacterial general secretion pathway protein G signature 58 76 5.7E-18 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 PRINTS PR00813 Bacterial general secretion pathway protein G signature 22 47 5.7E-18 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 PANTHER PTHR30093 11 156 1.2E-68 T 22-04-2016 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 Pfam PF08334 Type II secretion system (T2SS), protein G 45 154 2.5E-44 T 22-04-2016 IPR013545 Type II secretion system protein G RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 Gene3D G3DSA:3.30.700.10 23 87 2.7E-10 T 22-04-2016 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 SUPERFAMILY SSF54523 49 155 3.09E-41 T 22-04-2016 RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 1.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16790 681dd7f01f7fa16264e945b4fec14ac4 156 PANTHER PTHR30093:SF9 11 156 1.2E-68 T 22-04-2016 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 Pfam PF00672 HAMP domain 341 407 1.7E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 SMART SM00304 360 412 2.2E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 SUPERFAMILY SSF58104 380 661 1.14E-72 T 22-04-2016 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 PANTHER PTHR32089 257 662 2.6E-139 T 22-04-2016 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 Pfam PF17201 Cache 3/Cache 2 fusion domain 48 336 1.1E-83 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 SMART SM00283 413 660 8.2E-92 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 Gene3D G3DSA:1.10.287.950 427 632 3.3E-59 T 22-04-2016 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 Gene3D G3DSA:3.30.450.20 197 329 3.2E-15 T 22-04-2016 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 SUPERFAMILY SSF103190 122 220 1.02E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 PANTHER PTHR32089:SF63 257 662 2.6E-139 T 22-04-2016 RPIC_RS16895 ba691cb71093aa59f9b496225d655b9e 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 659 1.3E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 SMART SM01274 39 172 1.0E-76 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 PIRSF PIRSF036684 19 780 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Pfam PF12434 Malate dehydrogenase enzyme 5 37 6.6E-18 T 22-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 SUPERFAMILY SSF53223 31 182 1.37E-51 T 22-04-2016 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 SUPERFAMILY SSF51735 184 461 1.32E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 PANTHER PTHR23406 53 466 7.4E-162 T 22-04-2016 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 SMART SM00919 184 421 2.6E-140 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Gene3D G3DSA:3.40.50.720 182 464 2.2E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Gene3D G3DSA:3.40.50.10380 31 181 1.2E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Pfam PF03949 Malic enzyme, NAD binding domain 186 380 5.0E-22 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 SUPERFAMILY SSF53659 450 775 3.25E-92 T 22-04-2016 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Pfam PF00390 Malic enzyme, N-terminal domain 40 172 1.6E-25 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Gene3D G3DSA:3.40.50.10750 601 747 3.8E-53 T 22-04-2016 RPIC_RS14840 57cd78585cb20f013edccbb568962346 781 Pfam PF01515 Phosphate acetyl/butaryl transferase 450 772 4.5E-100 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RPIC_RS14015 975d60d04583bec54f457b318029c36f 167 Gene3D G3DSA:4.10.1020.10 67 136 7.3E-29 T 22-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain RPIC_RS14015 975d60d04583bec54f457b318029c36f 167 PANTHER PTHR38604 1 156 1.6E-49 T 22-04-2016 RPIC_RS14015 975d60d04583bec54f457b318029c36f 167 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 25 149 1.7E-48 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RPIC_RS14015 975d60d04583bec54f457b318029c36f 167 PANTHER PTHR38604:SF1 1 156 1.6E-49 T 22-04-2016 RPIC_RS14015 975d60d04583bec54f457b318029c36f 167 PIRSF PIRSF006105 1 164 6.4E-54 T 22-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB RPIC_RS14015 975d60d04583bec54f457b318029c36f 167 SUPERFAMILY SSF48695 32 157 1.73E-41 T 22-04-2016 IPR011031 Multihaem cytochrome RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 Pfam PF13489 Methyltransferase domain 51 202 1.7E-24 T 22-04-2016 RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 SUPERFAMILY SSF53335 14 231 4.53E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 PANTHER PTHR10108:SF910 7 233 5.7E-114 T 22-04-2016 RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 12 229 5.8E-84 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 PANTHER PTHR10108 7 233 5.7E-114 T 22-04-2016 RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 10 235 39.012 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 RPIC_RS03760 8549d4b7ba417c82232364fe3d89982a 238 Gene3D G3DSA:3.40.50.150 23 225 5.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 PANTHER PTHR24023:SF593 263 413 2.0E-12 T 22-04-2016 RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 PANTHER PTHR24023 263 413 2.0E-12 T 22-04-2016 RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 SUPERFAMILY SSF89796 219 463 3.66E-59 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 Pfam PF02515 CoA-transferase family III 221 421 3.1E-46 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 Pfam PF02515 CoA-transferase family III 42 207 1.7E-8 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 SUPERFAMILY SSF89796 41 218 2.75E-30 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 Gene3D G3DSA:3.40.50.10540 44 166 1.4E-11 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS17675 506ddd71d4c76c7828c2121616e2fc91 477 Gene3D G3DSA:3.40.50.10540 219 419 6.5E-78 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 SUPERFAMILY SSF47203 281 457 4.03E-47 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 PANTHER PTHR10909:SF296 4 471 7.6E-192 T 22-04-2016 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 5.6E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Gene3D G3DSA:1.20.140.10 267 456 1.5E-55 T 22-04-2016 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Gene3D G3DSA:1.10.540.10 38 159 7.8E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 33 1.0E-7 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 474 588 5.0E-26 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Gene3D G3DSA:2.40.110.10 161 266 2.8E-26 T 22-04-2016 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 SUPERFAMILY SSF56645 38 280 1.31E-57 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 1.4E-12 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 PANTHER PTHR10909 4 471 7.6E-192 T 22-04-2016 RPIC_RS12990 65c516033defc70f369ed2f95284ce0d 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 446 6.9E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10360 c73c236dcffce4dae9776237fd052e1d 687 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 124 654 1.5E-170 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RPIC_RS10360 c73c236dcffce4dae9776237fd052e1d 687 PANTHER PTHR21075 1 656 5.7E-218 T 22-04-2016 RPIC_RS10360 c73c236dcffce4dae9776237fd052e1d 687 Gene3D G3DSA:3.20.70.20 129 656 1.6E-194 T 22-04-2016 RPIC_RS10360 c73c236dcffce4dae9776237fd052e1d 687 SUPERFAMILY SSF51998 124 658 2.96E-154 T 22-04-2016 RPIC_RS10360 c73c236dcffce4dae9776237fd052e1d 687 Pfam PF03477 ATP cone domain 9 94 2.5E-17 T 22-04-2016 IPR005144 ATP-cone domain RPIC_RS10360 c73c236dcffce4dae9776237fd052e1d 687 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 123 655 1.7E-136 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 SMART SM00382 193 372 2.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 PANTHER PTHR11564 94 393 6.4E-121 T 22-04-2016 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 Gene3D G3DSA:1.20.120.140 124 205 1.6E-27 T 22-04-2016 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 Gene3D G3DSA:3.40.50.300 206 394 4.9E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 367 380 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 SUPERFAMILY SSF47364 99 174 3.14E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 123 394 58.571 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 123 393 3.0E-100 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 SMART SM00963 104 180 4.1E-16 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 SUPERFAMILY SSF52540 192 393 6.71E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 Pfam PF02881 SRP54-type protein, helical bundle domain 113 174 7.6E-10 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 Pfam PF00448 SRP54-type protein, GTPase domain 194 394 9.9E-71 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 PANTHER PTHR11564:SF16 94 393 6.4E-121 T 22-04-2016 RPIC_RS01170 85fb354b1848dff607d7819e2f9108d4 394 SMART SM00962 194 394 7.5E-109 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF01751 Toprim domain 451 563 1.6E-18 T 22-04-2016 IPR006171 Toprim domain RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 17 842 7.9E-288 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 557 569 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 452 466 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 82 95 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 519 535 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 129 143 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 47 62 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 537 554 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 300 313 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR00418 DNA topoisomerase II family signature 774 790 4.6E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF56719 768 832 8.37E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF56719 426 592 8.37E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF54211 253 424 2.85E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SMART SM00387 43 208 2.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 771 831 1.0E-28 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SUPERFAMILY SSF55874 17 248 2.88E-63 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PANTHER PTHR10169 15 166 9.0E-286 T 22-04-2016 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PANTHER PTHR10169 184 585 9.0E-286 T 22-04-2016 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PANTHER PTHR10169 762 842 9.0E-286 T 22-04-2016 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 207 1.2E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 406 426 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 795 807 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 252 274 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 228 241 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 502 511 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 392 406 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 344 360 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 213 228 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 811 827 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 PRINTS PR01159 DNA gyrase subunit B signature 17 27 9.2E-74 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 ProSitePatterns PS00177 DNA topoisomerase II signature. 454 462 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 14 842 99.026 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.40.50.670 436 582 7.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.40.50.670 756 824 7.6E-100 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 SMART SM00433 47 835 2.7E-247 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.30.230.10 252 424 2.9E-73 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Pfam PF00204 DNA gyrase B 253 422 5.9E-56 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS00015 b3c67e260c46c6a8bfba8932b337f7ee 842 Gene3D G3DSA:3.30.565.10 17 250 8.2E-91 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SMART SM00052 659 904 4.3E-112 T 22-04-2016 IPR001633 EAL domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SUPERFAMILY SSF55781 198 351 2.84E-21 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 40 160 2.5E-13 T 22-04-2016 IPR000014 PAS domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SMART SM00267 474 649 3.5E-71 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Pfam PF13185 GAF domain 197 339 5.7E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SMART SM00065 196 348 1.9E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SUPERFAMILY SSF55785 57 162 7.93E-16 T 22-04-2016 IPR000014 PAS domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SUPERFAMILY SSF55785 343 471 5.93E-15 T 22-04-2016 IPR000014 PAS domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 PANTHER PTHR10799:SF774 521 759 1.5E-96 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 PANTHER PTHR10799:SF774 343 490 1.5E-96 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Gene3D G3DSA:3.30.450.40 186 349 1.8E-16 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Gene3D G3DSA:3.20.20.450 662 911 1.7E-93 T 22-04-2016 IPR001633 EAL domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SMART SM00091 352 418 0.0071 T 22-04-2016 IPR000014 PAS domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SMART SM00091 40 106 2.3E-7 T 22-04-2016 IPR000014 PAS domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Pfam PF00563 EAL domain 667 899 6.3E-70 T 22-04-2016 IPR001633 EAL domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Gene3D G3DSA:3.30.450.20 350 471 2.5E-14 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SUPERFAMILY SSF141868 666 911 9.02E-85 T 22-04-2016 IPR001633 EAL domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Pfam PF00990 Diguanylate cyclase, GGDEF domain 485 645 3.1E-52 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Gene3D G3DSA:3.30.70.270 487 657 1.9E-62 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 PANTHER PTHR10799 521 759 1.5E-96 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 PANTHER PTHR10799 343 490 1.5E-96 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Pfam PF00989 PAS fold 352 467 2.5E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Pfam PF00989 PAS fold 41 150 2.0E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 Gene3D G3DSA:3.30.450.20 44 172 4.5E-16 T 22-04-2016 RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 482 648 4.3E-46 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02495 07340a2f0ca02ff26af1692ecffdc622 917 SUPERFAMILY SSF55073 490 650 1.7E-53 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 SUPERFAMILY SSF50685 26 372 3.45E-116 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 PANTHER PTHR30124 81 371 2.2E-89 T 22-04-2016 RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 PIRSF PIRSF019422 12 379 1.4E-107 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 Pfam PF06725 3D domain 295 368 4.0E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 Gene3D G3DSA:2.40.40.10 58 162 4.2E-28 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 Gene3D G3DSA:2.40.40.10 184 372 9.7E-57 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 SMART SM00925 142 274 6.8E-64 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 PANTHER PTHR30124:SF0 81 371 2.2E-89 T 22-04-2016 RPIC_RS15395 31d6017053302843a3c1e7e66a0b7f30 380 Pfam PF03562 MltA specific insert domain 68 273 1.3E-63 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 RPIC_RS17575 28c76ba71b405a392d2dfed1ee1e6873 239 PANTHER PTHR36920 6 239 5.9E-39 T 22-04-2016 RPIC_RS17575 28c76ba71b405a392d2dfed1ee1e6873 239 PANTHER PTHR36920:SF1 6 239 5.9E-39 T 22-04-2016 RPIC_RS17575 28c76ba71b405a392d2dfed1ee1e6873 239 Gene3D G3DSA:2.40.160.20 23 239 7.3E-67 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS17575 28c76ba71b405a392d2dfed1ee1e6873 239 Pfam PF03922 OmpW family 50 239 3.6E-37 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC_RS17575 28c76ba71b405a392d2dfed1ee1e6873 239 SUPERFAMILY SSF56925 25 239 7.59E-24 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS13200 4f7377a0129497fb44d160f70f1437bf 372 PANTHER PTHR33529:SF2 1 349 8.3E-62 T 22-04-2016 RPIC_RS13200 4f7377a0129497fb44d160f70f1437bf 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 346 7.1E-57 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RPIC_RS13200 4f7377a0129497fb44d160f70f1437bf 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 6.2E-120 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 RPIC_RS13200 4f7377a0129497fb44d160f70f1437bf 372 PANTHER PTHR33529 1 349 8.3E-62 T 22-04-2016 RPIC_RS09555 c2a3ef82ab442173454f3ddafbe9e4de 190 SUPERFAMILY SSF56235 1 186 9.62E-29 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS09555 c2a3ef82ab442173454f3ddafbe9e4de 190 Pfam PF00227 Proteasome subunit 2 186 1.0E-10 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 RPIC_RS09555 c2a3ef82ab442173454f3ddafbe9e4de 190 Gene3D G3DSA:3.60.20.10 2 169 5.8E-29 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS17795 73a71ef82ea2bfb8a2ec5f6a966d4310 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 8.1E-11 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RPIC_RS17795 73a71ef82ea2bfb8a2ec5f6a966d4310 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 7 29 3.0E-11 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RPIC_RS15790 329cb41abaca5eff9b8cc3813be4f1ba 351 PANTHER PTHR30349 77 345 1.2E-45 T 22-04-2016 RPIC_RS15790 329cb41abaca5eff9b8cc3813be4f1ba 351 SUPERFAMILY SSF56349 59 340 3.83E-63 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS15790 329cb41abaca5eff9b8cc3813be4f1ba 351 Gene3D G3DSA:1.10.443.10 166 341 3.8E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS15790 329cb41abaca5eff9b8cc3813be4f1ba 351 Gene3D G3DSA:1.10.150.130 60 159 1.1E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS15790 329cb41abaca5eff9b8cc3813be4f1ba 351 Pfam PF00589 Phage integrase family 167 334 1.2E-29 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS15790 329cb41abaca5eff9b8cc3813be4f1ba 351 PANTHER PTHR30349:SF20 77 345 1.2E-45 T 22-04-2016 RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 11 351 5.0E-137 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 PANTHER PTHR30486:SF3 11 368 4.0E-150 T 22-04-2016 RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 PANTHER PTHR30486 11 368 4.0E-150 T 22-04-2016 RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 Gene3D G3DSA:3.40.50.300 109 352 1.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 Pfam PF00437 Type II/IV secretion system protein 85 276 8.1E-37 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 201 215 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS14375 335dec584f621473f67d980e754af9b0 379 SUPERFAMILY SSF52540 5 345 1.44E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 SMART SM01092 226 326 5.0E-28 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 324 8.1E-20 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 SUPERFAMILY SSF55447 224 326 1.7E-27 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 PANTHER PTHR11908 1 118 4.1E-131 T 22-04-2016 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 PANTHER PTHR11908 162 324 4.1E-131 T 22-04-2016 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 Gene3D G3DSA:3.30.390.50 224 325 3.1E-36 T 22-04-2016 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 Gene3D G3DSA:3.30.465.10 57 112 1.4E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 Gene3D G3DSA:3.30.465.10 157 219 1.4E-34 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 PANTHER PTHR11908:SF97 1 118 4.1E-131 T 22-04-2016 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 PANTHER PTHR11908:SF97 162 324 4.1E-131 T 22-04-2016 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 SUPERFAMILY SSF56176 2 219 4.14E-60 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 219 6.9E-49 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC_RS16720 98a1f9867c3b15ff9c70ac14863488d2 334 Gene3D G3DSA:3.30.43.10 1 50 4.6E-17 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS08915 13fb287bd7da7bfe82e89b6412b8ad90 148 PANTHER PTHR30602 7 122 5.6E-12 T 22-04-2016 RPIC_RS08915 13fb287bd7da7bfe82e89b6412b8ad90 148 Gene3D G3DSA:3.40.630.30 5 123 1.5E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS08915 13fb287bd7da7bfe82e89b6412b8ad90 148 SUPERFAMILY SSF55729 6 118 2.4E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS08915 13fb287bd7da7bfe82e89b6412b8ad90 148 Pfam PF00583 Acetyltransferase (GNAT) family 43 108 4.4E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS08915 13fb287bd7da7bfe82e89b6412b8ad90 148 PANTHER PTHR30602:SF4 7 122 5.6E-12 T 22-04-2016 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 Pfam PF11734 TilS substrate C-terminal domain 395 464 1.4E-22 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 PANTHER PTHR11807 40 446 2.0E-68 T 22-04-2016 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 41 219 4.2E-49 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 393 438 2.5E-15 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 Pfam PF01171 PP-loop family 41 219 1.2E-52 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 Gene3D G3DSA:3.40.50.620 37 199 8.3E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 SMART SM00977 393 464 5.8E-22 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 PANTHER PTHR11807:SF2 40 446 2.0E-68 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 17 326 21.826 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 Pfam PF09179 TilS substrate binding domain 267 333 1.8E-17 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 SUPERFAMILY SSF52402 39 252 3.94E-53 T 22-04-2016 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 SUPERFAMILY SSF82829 253 336 6.54E-20 T 22-04-2016 RPIC_RS05000 2b72eb8b228ad24a1bd3d274e64fb42a 472 SUPERFAMILY SSF56037 356 467 1.1E-23 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 Gene3D G3DSA:3.40.50.300 25 252 6.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 SUPERFAMILY SSF52540 20 255 2.07E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 Pfam PF00005 ABC transporter 41 191 2.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 PANTHER PTHR24220:SF483 27 266 1.5E-110 T 22-04-2016 RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 SMART SM00382 50 239 7.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS00820 33de5795e32977612513af43fe7eb25e 292 PANTHER PTHR24220 27 266 1.5E-110 T 22-04-2016 RPIC_RS13830 06151ab0f525ccb1109be7294a1adecf 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.286 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RPIC_RS13830 06151ab0f525ccb1109be7294a1adecf 62 SUPERFAMILY SSF158997 1 52 2.49E-21 T 22-04-2016 RPIC_RS13830 06151ab0f525ccb1109be7294a1adecf 62 PANTHER PTHR33505 1 53 2.5E-23 T 22-04-2016 RPIC_RS13830 06151ab0f525ccb1109be7294a1adecf 62 Gene3D G3DSA:2.20.25.10 8 54 4.2E-25 T 22-04-2016 RPIC_RS13830 06151ab0f525ccb1109be7294a1adecf 62 Pfam PF03966 Trm112p-like protein 2 41 3.2E-11 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 RPIC_RS16655 f5b6840c44e6e10daba95851b159463d 272 PANTHER PTHR30204 13 99 1.7E-26 T 22-04-2016 RPIC_RS16655 f5b6840c44e6e10daba95851b159463d 272 PANTHER PTHR30204:SF13 13 99 1.7E-26 T 22-04-2016 RPIC_RS16655 f5b6840c44e6e10daba95851b159463d 272 Gene3D G3DSA:1.10.1660.10 21 93 4.3E-17 T 22-04-2016 RPIC_RS16655 f5b6840c44e6e10daba95851b159463d 272 Pfam PF13411 MerR HTH family regulatory protein 21 88 1.2E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS16655 f5b6840c44e6e10daba95851b159463d 272 SMART SM00422 21 89 8.9E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS16655 f5b6840c44e6e10daba95851b159463d 272 SUPERFAMILY SSF46955 21 93 4.03E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS18150 b3e7932bc2c9319e4115eef3a518b2eb 204 PANTHER PTHR30212:SF4 5 199 1.6E-66 T 22-04-2016 RPIC_RS18150 b3e7932bc2c9319e4115eef3a518b2eb 204 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 123 2.6E-14 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 RPIC_RS18150 b3e7932bc2c9319e4115eef3a518b2eb 204 PANTHER PTHR30212 5 199 1.6E-66 T 22-04-2016 RPIC_RS18150 b3e7932bc2c9319e4115eef3a518b2eb 204 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 10 204 4.5E-81 T 22-04-2016 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent RPIC_RS18150 b3e7932bc2c9319e4115eef3a518b2eb 204 SUPERFAMILY SSF50475 25 173 1.43E-21 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS18150 b3e7932bc2c9319e4115eef3a518b2eb 204 Gene3D G3DSA:2.30.110.10 26 147 3.5E-21 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS01495 969628a6c6eeafa741bd5ad9aada3d5b 320 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 99 291 9.4E-10 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC_RS01495 969628a6c6eeafa741bd5ad9aada3d5b 320 PANTHER PTHR30606 1 298 8.6E-47 T 22-04-2016 RPIC_RS01495 969628a6c6eeafa741bd5ad9aada3d5b 320 PANTHER PTHR30606:SF6 1 298 8.6E-47 T 22-04-2016 RPIC_RS01495 969628a6c6eeafa741bd5ad9aada3d5b 320 PIRSF PIRSF028561 1 319 8.9E-130 T 22-04-2016 IPR014548 Predicted acyltransferase RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 SUPERFAMILY SSF51905 155 286 1.54E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 SUPERFAMILY SSF55424 363 430 8.24E-19 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 Gene3D G3DSA:3.50.50.60 287 358 1.1E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 Gene3D G3DSA:3.50.50.60 36 152 1.1E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 38 343 3.8E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 Gene3D G3DSA:3.90.760.10 363 430 2.4E-24 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 364 429 6.6E-22 T 22-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 PANTHER PTHR10632 3 384 2.9E-111 T 22-04-2016 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 Gene3D G3DSA:3.50.50.60 156 286 1.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 SUPERFAMILY SSF51905 37 154 2.49E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17140 afc23d637d6dddc3085ae8f318cc1f70 430 PANTHER PTHR10632:SF10 3 384 2.9E-111 T 22-04-2016 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 PANTHER PTHR30126 8 311 7.5E-114 T 22-04-2016 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 Gene3D G3DSA:1.10.10.10 8 87 5.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 PANTHER PTHR30126:SF36 8 311 7.5E-114 T 22-04-2016 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 SUPERFAMILY SSF46785 4 114 3.98E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 SUPERFAMILY SSF53850 93 300 2.64E-41 T 22-04-2016 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 9.7E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 Gene3D G3DSA:3.40.190.10 176 262 1.2E-16 T 22-04-2016 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 Gene3D G3DSA:3.40.190.10 91 175 3.2E-15 T 22-04-2016 RPIC_RS04700 31aacc24b8f5c6e4e8989c94ac29aa11 311 Pfam PF03466 LysR substrate binding domain 91 295 3.7E-44 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 PANTHER PTHR34571:SF1 1 272 1.6E-80 T 22-04-2016 RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 PANTHER PTHR34571 1 272 1.6E-80 T 22-04-2016 RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 SUPERFAMILY SSF51182 20 272 1.96E-86 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 Gene3D G3DSA:2.60.120.10 1 127 1.3E-46 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 Gene3D G3DSA:2.60.120.10 128 277 4.4E-71 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 Pfam PF07883 Cupin domain 195 252 6.1E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 Pfam PF07883 Cupin domain 72 141 8.9E-14 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS17935 a90b71e3501b8cb65bb123d2a855749e 278 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 6 272 2.8E-119 T 22-04-2016 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 PANTHER PTHR30363 1 253 8.0E-96 T 22-04-2016 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 SMART SM01134 70 234 1.5E-69 T 22-04-2016 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 SMART SM00420 4 56 6.6E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 5.9E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 5.9E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 Gene3D G3DSA:3.40.50.1360 74 216 2.1E-10 T 22-04-2016 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 SUPERFAMILY SSF46785 3 71 2.42E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 PANTHER PTHR30363:SF1 1 253 8.0E-96 T 22-04-2016 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 Pfam PF00455 DeoR C terminal sensor domain 72 232 3.0E-50 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 5.7E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 SUPERFAMILY SSF100950 71 234 1.54E-27 T 22-04-2016 RPIC_RS16470 dbc67ff5caef0df4149686bf538c5604 257 Gene3D G3DSA:1.10.10.10 3 56 6.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02790 c049a29aa56482d2e4b8676de3456bec 243 Pfam PF01292 Prokaryotic cytochrome b561 23 184 9.4E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC_RS02790 c049a29aa56482d2e4b8676de3456bec 243 PANTHER PTHR30485 3 199 4.5E-16 T 22-04-2016 RPIC_RS02790 c049a29aa56482d2e4b8676de3456bec 243 PANTHER PTHR30485:SF0 3 199 4.5E-16 T 22-04-2016 RPIC_RS02790 c049a29aa56482d2e4b8676de3456bec 243 SUPERFAMILY SSF81342 19 186 2.5E-36 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS02790 c049a29aa56482d2e4b8676de3456bec 243 Gene3D G3DSA:1.20.950.20 19 186 3.0E-7 T 22-04-2016 RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 SMART SM00852 21 171 2.8E-24 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 PANTHER PTHR10192 12 206 1.8E-76 T 22-04-2016 RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 83 96 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 Pfam PF00994 Probable molybdopterin binding domain 22 164 4.0E-29 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 Gene3D G3DSA:3.40.980.10 18 209 1.5E-51 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 SUPERFAMILY SSF53218 18 206 2.36E-46 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS03990 eb47edf95a53da2638530c68f7c341e8 215 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 20 164 4.0E-34 T 22-04-2016 IPR001453 MoaB/Mog domain RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 SMART SM00493 84 173 4.7E-11 T 22-04-2016 IPR006171 Toprim domain RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 Hamap MF_00017 Recombination protein RecR [recR]. 1 206 96.364 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 Pfam PF02132 RecR protein 44 82 1.5E-15 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 PANTHER PTHR30446:SF0 7 206 4.4E-94 T 22-04-2016 RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 Pfam PF13662 Toprim domain 84 179 9.1E-22 T 22-04-2016 IPR006171 Toprim domain RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 SUPERFAMILY SSF111304 8 206 4.05E-73 T 22-04-2016 IPR023627 Recombination protein RecR RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 PANTHER PTHR30446 7 206 4.4E-94 T 22-04-2016 RPIC_RS05155 8cadafce71781eee7f1d6d0d655a7682 206 TIGRFAM TIGR00615 recR: recombination protein RecR 8 204 2.7E-70 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RPIC_RS14355 7fc3add1b706954299d7ffe14791f07e 345 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14355 7fc3add1b706954299d7ffe14791f07e 345 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.7E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14355 7fc3add1b706954299d7ffe14791f07e 345 Pfam PF16074 Type IV Pilus-assembly protein W 197 339 7.0E-31 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RPIC_RS17115 caf5ec4bb3e236f469e5c8ad3f849285 151 Gene3D G3DSA:3.40.1260.10 35 151 1.1E-33 T 22-04-2016 IPR027396 DsrEFH-like RPIC_RS17115 caf5ec4bb3e236f469e5c8ad3f849285 151 Pfam PF02635 DsrE/DsrF-like family 52 151 2.7E-13 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein RPIC_RS17115 caf5ec4bb3e236f469e5c8ad3f849285 151 SUPERFAMILY SSF75169 36 151 2.35E-22 T 22-04-2016 IPR027396 DsrEFH-like RPIC_RS17115 caf5ec4bb3e236f469e5c8ad3f849285 151 PANTHER PTHR37691 10 151 3.0E-20 T 22-04-2016 RPIC_RS17115 caf5ec4bb3e236f469e5c8ad3f849285 151 PANTHER PTHR37691:SF1 10 151 3.0E-20 T 22-04-2016 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 PANTHER PTHR20861 12 274 1.9E-85 T 22-04-2016 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 Pfam PF08544 GHMP kinases C terminal 219 272 2.2E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 Gene3D G3DSA:3.30.230.10 12 163 1.7E-55 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 PANTHER PTHR20861:SF2 12 274 1.9E-85 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 PIRSF PIRSF010376 8 288 2.1E-89 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 SUPERFAMILY SSF55060 165 286 3.41E-32 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 281 32.586 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 SUPERFAMILY SSF54211 12 163 4.17E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 Pfam PF00288 GHMP kinases N terminal domain 91 148 3.9E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 285 4.2E-75 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS01225 b3fd3bed8d03901f1ed620deb4b72964 289 Gene3D G3DSA:3.30.70.890 165 287 6.9E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 PANTHER PTHR26402:SF50 5 231 1.1E-92 T 22-04-2016 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 Pfam PF00072 Response regulator receiver domain 7 116 4.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 4.7E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 SMART SM00862 155 231 7.5E-31 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 SMART SM00448 5 116 1.4E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 SUPERFAMILY SSF52172 4 129 1.85E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 Gene3D G3DSA:3.40.50.2300 3 124 6.9E-39 T 22-04-2016 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 PANTHER PTHR26402 5 231 1.1E-92 T 22-04-2016 RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 Gene3D G3DSA:1.10.10.10 134 232 6.4E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01435 c17360004635d6d851807b0d63172f40 242 SUPERFAMILY SSF46894 128 232 2.01E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 Gene3D G3DSA:2.30.38.10 359 432 4.2E-17 T 22-04-2016 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 Gene3D G3DSA:3.30.300.30 433 531 7.3E-24 T 22-04-2016 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 522 2.5E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 PANTHER PTHR24096:SF53 3 536 3.9E-237 T 22-04-2016 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 PANTHER PTHR24096 3 536 3.9E-237 T 22-04-2016 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 Gene3D G3DSA:3.40.50.980 190 339 7.6E-33 T 22-04-2016 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 Pfam PF00501 AMP-binding enzyme 19 438 8.5E-85 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 Gene3D G3DSA:3.40.50.980 14 189 2.0E-30 T 22-04-2016 RPIC_RS07205 7f6f137d83e9387da9e41747c6302cec 542 SUPERFAMILY SSF56801 13 534 5.89E-131 T 22-04-2016 RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 Pfam PF00005 ABC transporter 19 161 9.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 PANTHER PTHR24220:SF305 5 223 3.6E-99 T 22-04-2016 RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 Gene3D G3DSA:3.40.50.300 3 224 8.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 SMART SM00382 28 217 1.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 SUPERFAMILY SSF52540 3 225 1.49E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15965 1f6167a08e4caa43bbaac8779841ffc4 321 PANTHER PTHR24220 5 223 3.6E-99 T 22-04-2016 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 Pfam PF00171 Aldehyde dehydrogenase family 32 493 9.9E-164 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 SUPERFAMILY SSF53720 11 497 7.33E-162 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 Gene3D G3DSA:3.40.605.10 18 269 2.4E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 Gene3D G3DSA:3.40.309.10 270 469 5.0E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 RPIC_RS12315 31efaf0a259a3632773db91aed0f399f 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS07590 ff20f2093f081b8f3e157dc4e243a657 236 TIGRFAM TIGR03021 pilP_fam: type IV pilus biogenesis protein PilP 101 225 7.8E-12 T 22-04-2016 IPR022753 Type IV pilus biogenesis PilP RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 Pfam PF00970 Oxidoreductase FAD-binding domain 155 256 1.1E-6 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 Gene3D G3DSA:3.40.50.80 263 395 1.9E-29 T 22-04-2016 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 Pfam PF00042 Globin 10 102 1.5E-7 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PANTHER PTHR22924:SF49 1 396 2.5E-107 T 22-04-2016 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 SUPERFAMILY SSF52343 247 390 7.33E-31 T 22-04-2016 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 1.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00410 Phenol hydroxylase reductase family signature 360 368 1.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00410 Phenol hydroxylase reductase family signature 182 194 1.5E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 360 368 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 231 240 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 267 286 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 182 192 2.9E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 Gene3D G3DSA:1.10.490.10 2 142 2.8E-48 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 SUPERFAMILY SSF63380 149 256 3.74E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 Pfam PF00175 Oxidoreductase NAD-binding domain 268 373 4.8E-11 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 SUPERFAMILY SSF46458 1 144 1.13E-37 T 22-04-2016 IPR009050 Globin-like RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 PANTHER PTHR22924 1 396 2.5E-107 T 22-04-2016 RPIC_RS17895 2e382b1ed5ad570694991ca7adcf7d52 401 Gene3D G3DSA:2.40.30.10 152 257 2.9E-31 T 22-04-2016 RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 SUPERFAMILY SSF53474 23 309 1.01E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 Pfam PF00106 short chain dehydrogenase 335 524 9.5E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 Pfam PF00561 alpha/beta hydrolase fold 47 155 7.1E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 Gene3D G3DSA:3.40.50.1820 26 309 9.5E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 Gene3D G3DSA:3.40.50.720 334 569 7.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 410 421 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 484 503 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 505 522 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 458 474 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 336 353 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PANTHER PTHR24322 339 468 6.8E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PANTHER PTHR24322 484 516 6.8E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 SUPERFAMILY SSF51735 331 589 2.97E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 464 472 1.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 484 503 1.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 410 421 1.0E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06435 2129fc487e9e95edcfad3fef3e71a4aa 602 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 471 499 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 SUPERFAMILY SSF51161 1 208 4.72E-41 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 164 192 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 Gene3D G3DSA:2.160.10.10 2 106 4.5E-20 T 22-04-2016 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 8.9E-10 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 Gene3D G3DSA:2.160.10.10 107 207 1.3E-27 T 22-04-2016 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 PANTHER PTHR23416 150 205 2.2E-23 T 22-04-2016 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 PANTHER PTHR23416 1 134 2.2E-23 T 22-04-2016 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 PANTHER PTHR23416:SF8 150 205 2.2E-23 T 22-04-2016 RPIC_RS03095 fd4dabbe1d647349ade1dc3ee81d88c0 255 PANTHER PTHR23416:SF8 1 134 2.2E-23 T 22-04-2016 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 Gene3D G3DSA:3.40.309.10 259 445 2.9E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 Pfam PF00171 Aldehyde dehydrogenase family 13 469 7.9E-165 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 PANTHER PTHR11699 1 473 2.5E-234 T 22-04-2016 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 PANTHER PTHR11699:SF212 1 473 2.5E-234 T 22-04-2016 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 Gene3D G3DSA:3.40.605.10 4 258 4.3E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS06645 004b0931bd711a93f59972991f5f820c 478 SUPERFAMILY SSF53720 4 471 7.46E-160 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS11980 e778decd41dd4acc0c877f4a613c149f 329 PANTHER PTHR22911:SF6 24 307 2.7E-45 T 22-04-2016 RPIC_RS11980 e778decd41dd4acc0c877f4a613c149f 329 PANTHER PTHR22911 24 307 2.7E-45 T 22-04-2016 RPIC_RS11980 e778decd41dd4acc0c877f4a613c149f 329 SUPERFAMILY SSF103481 204 300 3.79E-11 T 22-04-2016 RPIC_RS11980 e778decd41dd4acc0c877f4a613c149f 329 Pfam PF00892 EamA-like transporter family 24 155 9.1E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 19 46 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 114 140 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 114 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 166 194 1.2E-43 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 21 238 9.2E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 Pfam PF00902 Sec-independent protein translocase protein (TatC) 23 233 6.7E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 9 252 18.199 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 PANTHER PTHR30371 2 260 2.7E-97 T 22-04-2016 RPIC_RS15880 395c2bab9dcc88c2893e569850ae7be4 267 PANTHER PTHR30371:SF0 2 260 2.7E-97 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 SUPERFAMILY SSF56784 5 215 2.31E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 185 1.2E-33 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 Gene3D G3DSA:3.40.50.1000 77 217 5.6E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 PANTHER PTHR18901 5 215 5.6E-48 T 22-04-2016 RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 Gene3D G3DSA:1.10.150.240 20 76 5.8E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 180 1.1E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 PANTHER PTHR18901:SF40 5 215 5.6E-48 T 22-04-2016 RPIC_RS04460 85fc916bd8b69dabe0a51d6f26a61a8e 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 185 1.3E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 Pfam PF00589 Phage integrase family 133 298 7.2E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 Gene3D G3DSA:1.10.150.130 7 99 1.1E-26 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 PANTHER PTHR30349:SF34 16 307 8.5E-21 T 22-04-2016 RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 SUPERFAMILY SSF47823 7 97 1.77E-25 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 PANTHER PTHR30349 16 307 8.5E-21 T 22-04-2016 RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 Gene3D G3DSA:1.10.443.10 100 299 1.3E-52 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08060 f05a486cca49bf8a002811451df86d9c 320 SUPERFAMILY SSF56349 98 305 8.83E-38 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 PANTHER PTHR33695 26 170 2.8E-55 T 22-04-2016 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 ProSitePatterns PS00855 Signal peptidases II signature. 117 129 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 Pfam PF01252 Signal peptidase (SPase) II 30 168 6.8E-40 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 TIGRFAM TIGR00077 lspA: signal peptidase II 29 171 1.7E-42 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 114 129 1.1E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 150 166 1.1E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 67 75 1.1E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 21 174 17.066 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS13435 ee6a66fd69b66274c7f5539bc4eea3c5 174 PANTHER PTHR33695:SF1 26 170 2.8E-55 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 SUPERFAMILY SSF56214 14 140 7.59E-28 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 13 140 1.2E-28 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 16 136 6.4E-19 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 20 108 4.0E-43 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 15 141 26.036 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 Gene3D G3DSA:3.90.470.20 14 140 1.1E-33 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS04585 1493b56c1bca112711b804ef9d7d2464 147 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 14 139 5.8E-21 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 Pfam PF07690 Major Facilitator Superfamily 25 366 3.0E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 PANTHER PTHR23502 19 397 9.6E-120 T 22-04-2016 RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 19 394 1.1E-93 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 Gene3D G3DSA:1.20.1250.20 212 401 1.4E-9 T 22-04-2016 RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 PANTHER PTHR23502:SF19 19 397 9.6E-120 T 22-04-2016 RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 SUPERFAMILY SSF103473 10 400 3.79E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS11700 fc5443b8759a6c7f2156f56bc40383bc 404 Gene3D G3DSA:1.20.1250.20 19 200 6.3E-30 T 22-04-2016 RPIC_RS11530 7fafd8e1c54fd6e41a3f87f1a8a3849e 161 SMART SM00507 86 139 6.4E-5 T 22-04-2016 IPR003615 HNH nuclease RPIC_RS11530 7fafd8e1c54fd6e41a3f87f1a8a3849e 161 Pfam PF01844 HNH endonuclease 99 139 5.3E-9 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 PIRSF PIRSF028756 4 286 1.8E-109 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 PANTHER PTHR34383 36 257 7.6E-118 T 22-04-2016 RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 37 261 3.5E-97 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 37 262 1.1E-107 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 PANTHER PTHR34383:SF1 36 257 7.6E-118 T 22-04-2016 RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 SUPERFAMILY SSF52540 66 255 4.11E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08355 8b2fe8d607eb1f6ca91578169b772e31 286 Gene3D G3DSA:3.40.50.300 23 273 1.2E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 SUPERFAMILY SSF51395 4 314 2.01E-68 T 22-04-2016 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 Pfam PF01207 Dihydrouridine synthase (Dus) 6 306 1.5E-68 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 9 314 51.144 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 PANTHER PTHR11082:SF26 5 315 2.3E-123 T 22-04-2016 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 PANTHER PTHR11082 5 315 2.3E-123 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 PIRSF PIRSF006621 1 324 4.3E-87 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS09380 0ae78b51634bb566340dc6764b0e0b45 326 Gene3D G3DSA:3.20.20.70 4 244 5.0E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 Gene3D G3DSA:2.60.40.420 491 611 1.5E-31 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 SUPERFAMILY SSF49503 178 385 4.61E-50 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 Gene3D G3DSA:2.60.40.420 57 172 2.3E-35 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 PANTHER PTHR11709:SF33 59 218 1.9E-93 T 22-04-2016 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 PANTHER PTHR11709:SF33 259 371 1.9E-93 T 22-04-2016 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 PANTHER PTHR11709:SF33 462 611 1.9E-93 T 22-04-2016 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 ProSitePatterns PS00079 Multicopper oxidases signature 1. 589 609 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 Pfam PF07732 Multicopper oxidase 64 173 3.3E-41 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 PANTHER PTHR11709 59 218 1.9E-93 T 22-04-2016 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 PANTHER PTHR11709 259 371 1.9E-93 T 22-04-2016 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 PANTHER PTHR11709 462 611 1.9E-93 T 22-04-2016 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 Gene3D G3DSA:2.60.40.420 182 382 9.8E-45 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 ProSitePatterns PS00080 Multicopper oxidases signature 2. 594 605 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 Pfam PF00394 Multicopper oxidase 184 360 3.8E-29 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 Pfam PF07731 Multicopper oxidase 498 611 4.2E-22 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 SUPERFAMILY SSF49503 53 196 1.99E-40 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 SUPERFAMILY SSF49503 450 611 3.51E-33 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08725 a390dcbf27cafffb1c91a1c807ac0feb 612 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 11 611 3.1E-300 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 PANTHER PTHR11922 1 536 5.2E-271 T 22-04-2016 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Gene3D G3DSA:3.40.50.620 219 395 1.3E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 539 54.101 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Gene3D G3DSA:3.30.300.10 396 539 1.2E-49 T 22-04-2016 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Gene3D G3DSA:3.40.50.880 2 218 1.4E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 SUPERFAMILY SSF52402 192 414 1.06E-59 T 22-04-2016 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Pfam PF00117 Glutamine amidotransferase class-I 7 195 2.5E-33 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 539 2.2E-140 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Pfam PF02540 NAD synthase 213 249 9.3E-7 T 22-04-2016 IPR022310 NAD/GMP synthase RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 3.2E-69 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 SUPERFAMILY SSF52317 1 232 1.09E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 Pfam PF00958 GMP synthase C terminal domain 453 538 1.4E-39 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 PANTHER PTHR11922:SF2 1 536 5.2E-271 T 22-04-2016 RPIC_RS06500 1fb2a0cacd04476a97b348f2308d47f0 539 SUPERFAMILY SSF54810 400 539 2.35E-43 T 22-04-2016 RPIC_RS10080 81a8a69901c5466cc9eac9a7db35b73e 92 Gene3D G3DSA:3.30.160.140 4 74 1.4E-7 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC_RS10080 81a8a69901c5466cc9eac9a7db35b73e 92 SUPERFAMILY SSF160272 4 90 1.18E-14 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC_RS10080 81a8a69901c5466cc9eac9a7db35b73e 92 Pfam PF07369 Protein of unknown function (DUF1488) 4 80 5.7E-21 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC_RS03305 0d33575b31ce472d12253038e2aac0de 154 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 81.059 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RPIC_RS03305 0d33575b31ce472d12253038e2aac0de 154 PANTHER PTHR30455:SF2 2 149 1.3E-60 T 22-04-2016 RPIC_RS03305 0d33575b31ce472d12253038e2aac0de 154 PANTHER PTHR30455 2 149 1.3E-60 T 22-04-2016 RPIC_RS03305 0d33575b31ce472d12253038e2aac0de 154 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 3.1E-55 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RPIC_RS03305 0d33575b31ce472d12253038e2aac0de 154 Pfam PF03477 ATP cone domain 51 136 1.4E-13 T 22-04-2016 IPR005144 ATP-cone domain RPIC_RS00405 f4d0a4705afb4d1b764624cd17c4d2e5 1071 SMART SM01043 924 1071 2.6E-18 T 22-04-2016 IPR005158 Bacterial transcriptional activator domain RPIC_RS00405 f4d0a4705afb4d1b764624cd17c4d2e5 1071 Gene3D G3DSA:1.25.40.10 701 742 2.4E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS00405 f4d0a4705afb4d1b764624cd17c4d2e5 1071 Gene3D G3DSA:1.25.40.10 987 1042 2.4E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS00405 f4d0a4705afb4d1b764624cd17c4d2e5 1071 SUPERFAMILY SSF48452 924 1068 1.74E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS00405 f4d0a4705afb4d1b764624cd17c4d2e5 1071 SUPERFAMILY SSF46894 849 906 5.1E-6 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS00405 f4d0a4705afb4d1b764624cd17c4d2e5 1071 Pfam PF03704 Bacterial transcriptional activator domain 924 1068 3.8E-15 T 22-04-2016 IPR005158 Bacterial transcriptional activator domain RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 SUPERFAMILY SSF111384 37 178 3.27E-36 T 22-04-2016 IPR024930 Skp domain RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 PANTHER PTHR35089 19 183 3.0E-36 T 22-04-2016 RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 PANTHER PTHR35089:SF1 19 183 3.0E-36 T 22-04-2016 RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 Pfam PF03938 Outer membrane protein (OmpH-like) 25 177 3.0E-36 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 PIRSF PIRSF002094 13 181 2.8E-50 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 SMART SM00935 26 178 4.0E-59 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 Gene3D G3DSA:3.30.910.20 113 178 5.3E-34 T 22-04-2016 RPIC_RS06395 50682beac361b6dd802c757f164a856f 183 Gene3D G3DSA:3.30.910.20 28 75 5.3E-34 T 22-04-2016 RPIC_RS10135 42f19cab00d4b24863bdcc9d1450b5c4 174 Gene3D G3DSA:2.160.10.10 2 168 2.4E-46 T 22-04-2016 RPIC_RS10135 42f19cab00d4b24863bdcc9d1450b5c4 174 PANTHER PTHR13061 1 170 1.8E-66 T 22-04-2016 RPIC_RS10135 42f19cab00d4b24863bdcc9d1450b5c4 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 6.3E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS10135 42f19cab00d4b24863bdcc9d1450b5c4 174 SUPERFAMILY SSF51161 2 169 3.47E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 446 211.034 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 13 444 9.0E-172 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 Pfam PF00709 Adenylosuccinate synthetase 12 438 2.5E-172 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 PANTHER PTHR11846 5 443 8.0E-235 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 Gene3D G3DSA:3.90.170.10 274 440 3.1E-63 T 22-04-2016 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 140 151 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 Gene3D G3DSA:1.10.300.10 111 203 3.7E-37 T 22-04-2016 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 SMART SM00788 11 439 2.3E-297 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 SUPERFAMILY SSF52540 11 444 4.67E-172 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 Gene3D G3DSA:3.40.440.10 204 273 1.1E-68 T 22-04-2016 RPIC_RS05315 32d6491d013e9adbc0fefb14e14cdfeb 446 Gene3D G3DSA:3.40.440.10 11 101 1.1E-68 T 22-04-2016 RPIC_RS08670 9b70ad81d5e01aaece3622d919278ed9 284 Pfam PF04191 Phospholipid methyltransferase 149 216 5.3E-11 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 RPIC_RS08670 9b70ad81d5e01aaece3622d919278ed9 284 PANTHER PTHR12714 106 235 1.5E-18 T 22-04-2016 RPIC_RS07395 5ee75db61202ccdcad8750c12f8120f9 658 Pfam PF00665 Integrase core domain 250 387 2.3E-7 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS07395 5ee75db61202ccdcad8750c12f8120f9 658 SUPERFAMILY SSF53098 228 454 3.95E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS07395 5ee75db61202ccdcad8750c12f8120f9 658 Gene3D G3DSA:3.30.420.10 227 458 2.0E-17 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 Gene3D G3DSA:3.90.550.10 4 202 1.4E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 PANTHER PTHR19136:SF81 1 204 9.7E-36 T 22-04-2016 RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 200 28.062 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 SUPERFAMILY SSF53448 6 197 9.18E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 197 7.0E-67 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 Pfam PF12804 MobA-like NTP transferase domain 9 161 3.0E-32 T 22-04-2016 IPR025877 MobA-like NTP transferase RPIC_RS04440 cd5522331e03ad93efdf88ab9789cbe6 204 PANTHER PTHR19136 1 204 9.7E-36 T 22-04-2016 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 Gene3D G3DSA:3.10.25.10 220 323 1.3E-30 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 Gene3D G3DSA:3.40.50.170 5 218 2.5E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 Pfam PF00551 Formyl transferase 6 193 2.5E-43 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 Pfam PF02911 Formyl transferase, C-terminal domain 217 315 4.9E-23 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 321 9.7E-87 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 145 168 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 SUPERFAMILY SSF50486 218 323 4.51E-29 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 PANTHER PTHR11138 5 323 3.5E-105 T 22-04-2016 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 318 35.045 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS18240 1a9163cd46c3b0d1ab4512c95936d024 327 SUPERFAMILY SSF53328 5 217 1.96E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PANTHER PTHR30413 20 273 4.0E-89 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 76 98 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 46 67 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 158 182 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 121 146 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PRINTS PR00164 ABC-2 type transport system membrane protein signature 215 234 5.9E-49 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PIRSF PIRSF006648 2 272 3.9E-22 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 PANTHER PTHR30413:SF7 20 273 4.0E-89 T 22-04-2016 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 Pfam PF01061 ABC-2 type transporter 26 237 2.1E-23 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RPIC_RS10470 8f4bddb3fbdbe23ae5eaf91747508809 273 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 23 271 4.3E-90 T 22-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 SUPERFAMILY SSF53659 4 334 3.9E-100 T 22-04-2016 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 PANTHER PTHR30004:SF5 1 333 2.5E-141 T 22-04-2016 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 4 332 1.1E-120 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 332 35.12 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 40 328 9.3E-105 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 PANTHER PTHR30004 1 333 2.5E-141 T 22-04-2016 RPIC_RS01930 6089b6984d8338762ed5579b951674ef 338 Gene3D G3DSA:3.40.718.10 2 334 1.4E-126 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Pfam PF00580 UvrD/REP helicase N-terminal domain 25 107 4.4E-10 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Pfam PF00580 UvrD/REP helicase N-terminal domain 132 221 6.6E-17 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 PANTHER PTHR11070:SF7 30 527 3.6E-62 T 22-04-2016 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Gene3D G3DSA:3.40.50.300 22 234 7.8E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Gene3D G3DSA:3.40.50.300 468 529 1.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Gene3D G3DSA:3.40.50.300 235 345 1.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Pfam PF13361 UvrD-like helicase C-terminal domain 417 523 9.0E-15 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 Pfam PF13361 UvrD-like helicase C-terminal domain 228 375 1.2E-9 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 PANTHER PTHR11070 30 527 3.6E-62 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS15660 230f29a46eea37a308b3df6752691f9a 557 SUPERFAMILY SSF52540 23 527 3.77E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 343 8.3E-94 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 2.7E-19 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 SUPERFAMILY SSF46589 15 100 2.72E-19 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 343 1.6E-96 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 SUPERFAMILY SSF55681 93 343 8.76E-74 T 22-04-2016 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 PANTHER PTHR11538 93 343 2.1E-88 T 22-04-2016 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 343 45.654 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 Gene3D G3DSA:3.30.930.10 11 343 4.0E-123 T 22-04-2016 RPIC_RS09700 ef1829a98443bdffad6d52ac4ec1b15d 344 PANTHER PTHR11538:SF40 93 343 2.1E-88 T 22-04-2016 RPIC_RS17780 fa1c7bd0a4354cd81beca9a682e1e273 366 Pfam PF04607 Region found in RelA / SpoT proteins 51 183 4.2E-20 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC_RS17780 fa1c7bd0a4354cd81beca9a682e1e273 366 Gene3D G3DSA:3.30.460.10 41 166 1.9E-19 T 22-04-2016 RPIC_RS17780 fa1c7bd0a4354cd81beca9a682e1e273 366 SUPERFAMILY SSF81301 8 211 1.37E-33 T 22-04-2016 RPIC_RS17780 fa1c7bd0a4354cd81beca9a682e1e273 366 Gene3D G3DSA:1.10.287.860 169 213 4.2E-11 T 22-04-2016 RPIC_RS17780 fa1c7bd0a4354cd81beca9a682e1e273 366 SMART SM00954 51 186 1.2E-20 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC_RS01440 99aac07dd94efc80ccb66fa4f68c9f59 224 PANTHER PTHR30485 1 222 3.3E-48 T 22-04-2016 RPIC_RS01440 99aac07dd94efc80ccb66fa4f68c9f59 224 SUPERFAMILY SSF81342 14 209 1.26E-35 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS01440 99aac07dd94efc80ccb66fa4f68c9f59 224 Pfam PF01292 Prokaryotic cytochrome b561 18 207 5.5E-27 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC_RS01440 99aac07dd94efc80ccb66fa4f68c9f59 224 Gene3D G3DSA:1.20.950.20 17 209 4.5E-46 T 22-04-2016 RPIC_RS01440 99aac07dd94efc80ccb66fa4f68c9f59 224 PANTHER PTHR30485:SF1 1 222 3.3E-48 T 22-04-2016 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 4 220 28.574 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 8 178 2.1E-45 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 PANTHER PTHR21343 8 235 1.7E-76 T 22-04-2016 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 PANTHER PTHR21343:SF13 8 235 1.7E-76 T 22-04-2016 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 Gene3D G3DSA:3.40.50.300 7 214 1.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 Pfam PF13500 AAA domain 8 213 6.1E-39 T 22-04-2016 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 PIRSF PIRSF006755 5 232 2.4E-61 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS06810 2ddb79863c186cdeecfb87db5f912409 235 SUPERFAMILY SSF52540 8 212 1.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 3.8E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 Gene3D G3DSA:1.10.3880.10 1 89 4.1E-41 T 22-04-2016 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 6.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 PANTHER PTHR36965 2 91 1.8E-40 T 22-04-2016 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 PANTHER PTHR36965:SF1 2 91 1.8E-40 T 22-04-2016 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.638 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 PIRSF PIRSF029827 1 90 2.3E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC_RS05355 7fc9caef456e812ce40c385aaa750689 91 SUPERFAMILY SSF111148 1 89 1.83E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 RPIC_RS03915 28b1c94d6ca9d55abf3409cbbede7f51 374 PANTHER PTHR11228 19 321 1.7E-90 T 22-04-2016 RPIC_RS03915 28b1c94d6ca9d55abf3409cbbede7f51 374 Pfam PF04055 Radical SAM superfamily 77 254 3.4E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS03915 28b1c94d6ca9d55abf3409cbbede7f51 374 SUPERFAMILY SSF102114 56 273 6.8E-15 T 22-04-2016 RPIC_RS03915 28b1c94d6ca9d55abf3409cbbede7f51 374 Gene3D G3DSA:3.20.20.70 79 262 1.6E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS03915 28b1c94d6ca9d55abf3409cbbede7f51 374 SMART SM00729 72 300 2.8E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS03915 28b1c94d6ca9d55abf3409cbbede7f51 374 PANTHER PTHR11228:SF26 19 321 1.7E-90 T 22-04-2016 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 SUPERFAMILY SSF82861 183 265 1.05E-9 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 SUPERFAMILY SSF82689 333 432 1.83E-25 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 Gene3D G3DSA:2.30.30.60 283 330 6.3E-9 T 22-04-2016 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 PANTHER PTHR30347 6 454 3.3E-66 T 22-04-2016 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 Pfam PF00924 Mechanosensitive ion channel 225 422 4.2E-43 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 Gene3D G3DSA:3.30.70.100 334 420 4.2E-18 T 22-04-2016 RPIC_RS13395 1b52ad72b682d192ca44cd4fbdcf0faa 457 SUPERFAMILY SSF50182 267 330 1.77E-11 T 22-04-2016 IPR010920 LSM domain RPIC_RS13020 89f1a0bae07dbc9ce00afa4917832b41 154 SUPERFAMILY SSF47598 4 42 2.33E-6 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RPIC_RS13020 89f1a0bae07dbc9ce00afa4917832b41 154 Gene3D G3DSA:1.10.1220.10 5 38 4.5E-6 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 PANTHER PTHR24096 1 554 2.2E-160 T 22-04-2016 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 Gene3D G3DSA:2.30.38.10 373 450 4.4E-26 T 22-04-2016 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 Gene3D G3DSA:3.40.50.980 25 214 1.2E-39 T 22-04-2016 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 545 5.5E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 SUPERFAMILY SSF56801 13 556 8.11E-153 T 22-04-2016 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 Gene3D G3DSA:3.40.50.980 215 372 1.1E-44 T 22-04-2016 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 Gene3D G3DSA:3.30.300.30 456 559 9.2E-29 T 22-04-2016 RPIC_RS03560 987311aa855ed217889ade95fb086eb3 568 Pfam PF00501 AMP-binding enzyme 29 458 2.1E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 Pfam PF13545 Crp-like helix-turn-helix domain 135 208 4.4E-19 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 191 4.6E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 160 176 4.6E-10 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 PANTHER PTHR24567 1 208 1.0E-65 T 22-04-2016 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 SMART SM00419 154 202 1.2E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 SUPERFAMILY SSF46785 133 210 4.76E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 Gene3D G3DSA:2.60.120.10 14 137 9.0E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 PANTHER PTHR24567:SF28 1 208 1.0E-65 T 22-04-2016 RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 Pfam PF00027 Cyclic nucleotide-binding domain 17 99 2.3E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 Gene3D G3DSA:1.10.10.10 138 211 4.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 SMART SM00100 1 115 5.7E-7 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS05525 f163e23bcbae9eb0279b2cf2dddae42b 215 SUPERFAMILY SSF51206 3 128 2.09E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 SMART SM00859 5 109 1.9E-12 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 PANTHER PTHR32338 1 308 1.4E-105 T 22-04-2016 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 48 103 3.1E-10 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 PANTHER PTHR32338:SF9 1 308 1.4E-105 T 22-04-2016 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 SUPERFAMILY SSF51735 6 141 1.4E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 Gene3D G3DSA:3.40.50.720 50 128 1.8E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 SUPERFAMILY SSF55347 120 291 4.58E-39 T 22-04-2016 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 308 5.9E-120 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 Gene3D G3DSA:3.30.360.10 129 291 9.7E-43 T 22-04-2016 RPIC_RS17930 f1adcc17ba3206e069751c5cfc8c0231 310 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 310 50.16 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 ProSitePatterns PS00091 Thymidylate synthase active site. 179 207 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 Pfam PF00303 Thymidylate synthase 56 210 2.3E-70 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 PANTHER PTHR11548 54 212 5.8E-107 T 22-04-2016 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 Gene3D G3DSA:3.30.572.10 54 212 1.1E-75 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 SUPERFAMILY SSF55831 44 212 1.7E-75 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 56 137 4.4E-40 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 138 212 1.7E-36 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 PRINTS PR00108 Thymidylate synthase family signature 168 187 2.2E-23 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 PRINTS PR00108 Thymidylate synthase family signature 95 116 2.2E-23 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS22445 4d2c464297e81d9f3bef9b6b1ccb71fa 212 PRINTS PR00108 Thymidylate synthase family signature 194 209 2.2E-23 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 Pfam PF00582 Universal stress protein family 1 144 5.7E-29 T 22-04-2016 IPR006016 UspA GO:0006950 RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 PRINTS PR01438 Universal stress protein signature 2 20 3.9E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 PRINTS PR01438 Universal stress protein signature 122 144 3.9E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 PRINTS PR01438 Universal stress protein signature 104 116 3.9E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 PANTHER PTHR31964 1 144 5.1E-27 T 22-04-2016 RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 Gene3D G3DSA:3.40.50.620 1 144 1.7E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 PANTHER PTHR31964:SF26 1 144 5.1E-27 T 22-04-2016 RPIC_RS06125 d8183d779929f2dac8ebd46bbf51e9fe 144 SUPERFAMILY SSF52402 1 144 4.26E-33 T 22-04-2016 RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 SUPERFAMILY SSF52540 7 200 2.73E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 PANTHER PTHR31715 8 205 1.5E-121 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 PIRSF PIRSF005624 2 205 3.6E-47 T 22-04-2016 RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 9 203 5.0E-100 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 Hamap MF_01389 Urease accessory protein UreG [ureG]. 7 205 46.786 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 Gene3D G3DSA:3.40.50.300 9 198 5.5E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10720 839d457bfc5c3414d8edb9879ece267b 206 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 181 4.5E-38 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 PANTHER PTHR23293 59 267 5.5E-68 T 22-04-2016 RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 61 234 2.1E-36 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 PIRSF PIRSF000857 26 265 8.7E-77 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 61 258 6.9E-80 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 SUPERFAMILY SSF52402 35 222 4.89E-41 T 22-04-2016 RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 Gene3D G3DSA:3.40.50.620 33 230 2.3E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13235 955bdc36b2e021c094450425495d744a 267 PANTHER PTHR23293:SF11 59 267 5.5E-68 T 22-04-2016 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 PANTHER PTHR32338 4 320 3.7E-102 T 22-04-2016 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 PANTHER PTHR32338:SF9 4 320 3.7E-102 T 22-04-2016 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 Gene3D G3DSA:3.30.360.10 125 288 6.1E-35 T 22-04-2016 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 SMART SM00859 4 105 4.0E-15 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 2 307 1.3E-158 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 307 52.326 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 40 99 2.1E-10 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 Gene3D G3DSA:3.40.50.720 43 124 5.1E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 SUPERFAMILY SSF55347 116 288 7.03E-36 T 22-04-2016 RPIC_RS00200 9fe553249d99ea1d81cccc3f3c9dce37 337 SUPERFAMILY SSF51735 1 137 4.5E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12645 c02764f2f75c225bb0275ec113a733ae 444 Pfam PF07690 Major Facilitator Superfamily 41 403 3.8E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS12645 c02764f2f75c225bb0275ec113a733ae 444 SUPERFAMILY SSF103473 23 440 2.09E-83 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS12645 c02764f2f75c225bb0275ec113a733ae 444 PANTHER PTHR11662 19 435 1.2E-162 T 22-04-2016 RPIC_RS12645 c02764f2f75c225bb0275ec113a733ae 444 PANTHER PTHR11662:SF3 19 435 1.2E-162 T 22-04-2016 RPIC_RS12645 c02764f2f75c225bb0275ec113a733ae 444 Gene3D G3DSA:1.20.1250.20 29 233 3.6E-45 T 22-04-2016 RPIC_RS12645 c02764f2f75c225bb0275ec113a733ae 444 Gene3D G3DSA:1.20.1250.20 249 435 4.8E-22 T 22-04-2016 RPIC_RS03155 0aafe0d6b4c8f489e3f13bb34ee0a1dc 216 SUPERFAMILY SSF53335 1 178 4.65E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03155 0aafe0d6b4c8f489e3f13bb34ee0a1dc 216 PANTHER PTHR11579:SF0 1 169 2.2E-31 T 22-04-2016 RPIC_RS03155 0aafe0d6b4c8f489e3f13bb34ee0a1dc 216 Gene3D G3DSA:3.40.50.150 10 212 7.2E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03155 0aafe0d6b4c8f489e3f13bb34ee0a1dc 216 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 206 7.0E-35 T 22-04-2016 RPIC_RS03155 0aafe0d6b4c8f489e3f13bb34ee0a1dc 216 PANTHER PTHR11579 1 169 2.2E-31 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 32.609 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 PANTHER PTHR11647:SF70 1 423 4.2E-130 T 22-04-2016 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 422 1.2E-95 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 SUPERFAMILY SSF51338 1 55 2.88E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 SUPERFAMILY SSF51338 367 423 2.88E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 Gene3D G3DSA:3.20.20.140 69 387 9.1E-88 T 22-04-2016 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 SUPERFAMILY SSF51556 56 367 3.0E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 Gene3D G3DSA:2.30.40.10 2 68 2.1E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 Pfam PF01979 Amidohydrolase family 225 420 1.1E-13 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS03035 fe16a40e9cf381ebe2af5c326f53eece 425 PANTHER PTHR11647 1 423 4.2E-130 T 22-04-2016 RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 SMART SM00487 243 445 6.0E-16 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 PANTHER PTHR30195 17 842 2.5E-249 T 22-04-2016 RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 705 974 2.6E-59 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 PANTHER PTHR30195:SF16 17 842 2.5E-249 T 22-04-2016 RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 Gene3D G3DSA:3.40.50.300 239 417 7.6E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 4 698 1.2E-120 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 Pfam PF04851 Type III restriction enzyme, res subunit 246 414 3.7E-36 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 187 8.9E-33 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RPIC_RS02185 d7ac6de177c48b19e59ae2ad88031970 989 SUPERFAMILY SSF52540 246 417 4.11E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09005 b0be59bd0b8007f9bd2543eb3fc2624e 309 PANTHER PTHR34820 1 307 6.8E-26 T 22-04-2016 RPIC_RS09005 b0be59bd0b8007f9bd2543eb3fc2624e 309 Pfam PF05425 Copper resistance protein D 198 301 7.2E-25 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 268 305 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 PANTHER PTHR11986:SF8 23 460 1.4E-162 T 22-04-2016 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 SUPERFAMILY SSF53383 21 454 2.48E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 Pfam PF00202 Aminotransferase class-III 44 451 2.3E-109 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 452 2.4E-153 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 Gene3D G3DSA:3.40.640.10 82 356 2.0E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 PANTHER PTHR11986 23 460 1.4E-162 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 Gene3D G3DSA:3.90.1150.10 21 81 3.0E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 Gene3D G3DSA:3.90.1150.10 359 456 3.0E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS06800 bcf9851ae2bf3c4814ec4d5e6dbbb352 471 PIRSF PIRSF000521 43 457 2.3E-29 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 4.2E-128 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 257 1.8E-48 T 22-04-2016 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 SUPERFAMILY SSF51621 8 292 8.97E-99 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 Gene3D G3DSA:3.20.20.60 9 289 2.3E-98 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 PANTHER PTHR21631 8 297 4.6E-155 T 22-04-2016 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 49.506 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 RPIC_RS10595 71382388bef032bc9bb88f29444c94f4 298 PANTHER PTHR21631:SF4 8 297 4.6E-155 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 Pfam PF12161 HsdM N-terminal domain 9 168 6.0E-29 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 320 326 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 PANTHER PTHR30408 176 519 2.1E-150 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 Gene3D G3DSA:3.40.50.150 204 451 2.2E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 6 513 1.3E-116 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 352 376 1.1E-19 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 1.1E-19 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 317 329 1.1E-19 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 236 250 1.1E-19 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 PANTHER PTHR30408:SF4 176 519 2.1E-150 T 22-04-2016 RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 SUPERFAMILY SSF53335 7 46 2.66E-131 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 SUPERFAMILY SSF53335 91 533 2.66E-131 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS02200 16c1f3b50a16171d9328cf32eb0f9a0f 537 Pfam PF02384 N-6 DNA Methylase 178 499 5.0E-102 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PANTHER PTHR11206 468 489 2.3E-85 T 22-04-2016 RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 Pfam PF03023 MviN-like protein 28 474 1.7E-136 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PANTHER PTHR11206:SF90 223 447 2.3E-85 T 22-04-2016 RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 9.0E-142 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 264 290 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 158 179 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 362 381 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 414 431 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 134 158 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 33 52 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PRINTS PR01806 Virulence factor MviN signature 52 68 4.7E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PIRSF PIRSF002869 1 517 1.3E-154 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PANTHER PTHR11206:SF90 468 489 2.3E-85 T 22-04-2016 RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PANTHER PTHR11206 223 447 2.3E-85 T 22-04-2016 RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PANTHER PTHR11206 67 85 2.3E-85 T 22-04-2016 RPIC_RS13955 4a28325df31eabd64f84db78f6cf0bd6 517 PANTHER PTHR11206:SF90 67 85 2.3E-85 T 22-04-2016 RPIC_RS20535 2ff024288415a15cbac66410d314ac44 93 Pfam PF13616 PPIC-type PPIASE domain 42 92 4.5E-6 T 22-04-2016 RPIC_RS20535 2ff024288415a15cbac66410d314ac44 93 Gene3D G3DSA:3.10.50.40 44 92 4.6E-8 T 22-04-2016 RPIC_RS20535 2ff024288415a15cbac66410d314ac44 93 SUPERFAMILY SSF54534 45 92 1.11E-8 T 22-04-2016 RPIC_RS20535 2ff024288415a15cbac66410d314ac44 93 Gene3D G3DSA:3.10.50.40 1 43 2.3E-7 T 22-04-2016 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 SUPERFAMILY SSF52172 4 189 2.13E-42 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 SMART SM00382 165 308 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Gene3D G3DSA:1.10.8.60 318 366 5.3E-19 T 22-04-2016 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Pfam PF00158 Sigma-54 interaction domain 145 311 1.3E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 438 8.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 8.0E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 SUPERFAMILY SSF46689 358 438 7.84E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 SUPERFAMILY SSF52540 145 375 4.13E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Pfam PF00072 Response regulator receiver domain 7 116 6.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Gene3D G3DSA:3.40.50.2300 5 136 2.0E-33 T 22-04-2016 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 PANTHER PTHR32071 5 438 1.5E-209 T 22-04-2016 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Gene3D G3DSA:1.10.10.60 367 438 3.7E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 2.0E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 SMART SM00448 5 116 2.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 PANTHER PTHR32071:SF11 5 438 1.5E-209 T 22-04-2016 RPIC_RS00910 eb8c0cbc510f6abeab3aa2cc8ebf39e5 438 Gene3D G3DSA:3.40.50.300 144 317 4.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03730 5f77c5035f1cdca68b9d83162472c9e3 194 Gene3D G3DSA:2.60.40.1090 29 194 5.5E-17 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC_RS03730 5f77c5035f1cdca68b9d83162472c9e3 194 Pfam PF00419 Fimbrial protein 31 193 5.4E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC_RS03730 5f77c5035f1cdca68b9d83162472c9e3 194 SUPERFAMILY SSF49401 31 194 3.68E-14 T 22-04-2016 IPR008966 Adhesion domain RPIC_RS17035 b772a90610fdecb0a0260049699d1715 108 Pfam PF07110 EthD domain 18 91 4.8E-10 T 22-04-2016 IPR009799 EthD domain RPIC_RS17035 b772a90610fdecb0a0260049699d1715 108 Gene3D G3DSA:3.30.70.900 2 100 4.9E-44 T 22-04-2016 RPIC_RS17035 b772a90610fdecb0a0260049699d1715 108 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 103 4.5E-32 T 22-04-2016 IPR009799 EthD domain RPIC_RS17035 b772a90610fdecb0a0260049699d1715 108 SUPERFAMILY SSF54909 1 102 6.17E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS17035 b772a90610fdecb0a0260049699d1715 108 PANTHER PTHR40260 1 106 4.5E-22 T 22-04-2016 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 SUPERFAMILY SSF52935 327 477 3.01E-36 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 SUPERFAMILY SSF51621 166 343 5.1E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 SUPERFAMILY SSF51621 2 76 5.1E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 Gene3D G3DSA:3.20.20.60 3 73 6.5E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 Gene3D G3DSA:3.20.20.60 168 330 6.5E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 Gene3D G3DSA:3.40.1380.20 331 476 6.8E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 SUPERFAMILY SSF50800 71 164 5.06E-26 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PANTHER PTHR11817:SF17 1 477 3.1E-230 T 22-04-2016 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PANTHER PTHR11817 1 477 3.1E-230 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 1.2E-114 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 Gene3D G3DSA:2.40.33.10 74 167 8.3E-29 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 476 2.9E-153 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 Pfam PF02887 Pyruvate kinase, alpha/beta domain 362 474 2.1E-27 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PRINTS PR01050 Pyruvate kinase family signature 317 333 3.14E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PRINTS PR01050 Pyruvate kinase family signature 185 199 3.14E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PRINTS PR01050 Pyruvate kinase family signature 273 297 3.14E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PRINTS PR01050 Pyruvate kinase family signature 248 272 3.14E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PRINTS PR01050 Pyruvate kinase family signature 298 316 3.14E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS02415 361b419fac3e427f826e1f95774bf81c 479 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.14E-45 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS10250 15f4460fc6596430ae8f74c08dfb306d 309 Gene3D G3DSA:1.10.3720.10 100 305 9.7E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS10250 15f4460fc6596430ae8f74c08dfb306d 309 PANTHER PTHR30465:SF2 15 309 1.2E-99 T 22-04-2016 RPIC_RS10250 15f4460fc6596430ae8f74c08dfb306d 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 307 2.4E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS10250 15f4460fc6596430ae8f74c08dfb306d 309 PANTHER PTHR30465 15 309 1.2E-99 T 22-04-2016 RPIC_RS10250 15f4460fc6596430ae8f74c08dfb306d 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 21 76 8.1E-10 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIC_RS10250 15f4460fc6596430ae8f74c08dfb306d 309 SUPERFAMILY SSF161098 100 296 3.01E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 Gene3D G3DSA:3.30.565.10 286 437 7.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 SMART SM00304 187 239 3.0E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 436 2.9E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 SUPERFAMILY SSF158472 189 236 1.57E-5 T 22-04-2016 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 SUPERFAMILY SSF55874 289 439 4.85E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 Pfam PF00672 HAMP domain 168 235 1.2E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 SMART SM00388 240 299 5.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 SMART SM00387 337 452 8.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 52 158 1.0E-37 T 22-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 PANTHER PTHR24423 181 437 8.1E-50 T 22-04-2016 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 PANTHER PTHR24423 1 7 8.1E-50 T 22-04-2016 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 SUPERFAMILY SSF47384 225 296 9.61E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 296 1.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 3.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 430 3.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09315 4f89e84186858ce78a46fa922a6c86d4 453 Gene3D G3DSA:1.10.287.130 230 285 6.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS12245 804a5791864ea6ea5be99f2d8b21868f 293 SUPERFAMILY SSF53850 37 286 3.95E-29 T 22-04-2016 RPIC_RS12245 804a5791864ea6ea5be99f2d8b21868f 293 SMART SM00062 45 290 9.4E-11 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS12245 804a5791864ea6ea5be99f2d8b21868f 293 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 133 287 1.2E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS12245 804a5791864ea6ea5be99f2d8b21868f 293 Gene3D G3DSA:3.40.190.10 249 287 1.3E-13 T 22-04-2016 RPIC_RS12245 804a5791864ea6ea5be99f2d8b21868f 293 Gene3D G3DSA:3.40.190.10 42 139 1.3E-13 T 22-04-2016 RPIC_RS12245 804a5791864ea6ea5be99f2d8b21868f 293 Gene3D G3DSA:3.40.190.10 140 240 8.5E-11 T 22-04-2016 RPIC_RS01605 d53aeab5818603dab62e78472719499a 193 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 59 152 0.002 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 RPIC_RS01605 d53aeab5818603dab62e78472719499a 193 PANTHER PTHR30353:SF12 1 176 6.8E-31 T 22-04-2016 RPIC_RS01605 d53aeab5818603dab62e78472719499a 193 PANTHER PTHR30353 1 176 6.8E-31 T 22-04-2016 IPR032818 DedA family RPIC_RS15990 d792133b4cff3d88a2628a41cbbfc24e 255 Pfam PF02405 Permease MlaE 40 252 1.2E-75 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC_RS15990 d792133b4cff3d88a2628a41cbbfc24e 255 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 34 254 2.4E-80 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RPIC_RS15990 d792133b4cff3d88a2628a41cbbfc24e 255 PANTHER PTHR30188:SF4 1 254 6.4E-97 T 22-04-2016 RPIC_RS15990 d792133b4cff3d88a2628a41cbbfc24e 255 PANTHER PTHR30188 1 254 6.4E-97 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 PANTHER PTHR30007:SF4 13 286 1.0E-66 T 22-04-2016 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 Gene3D G3DSA:3.20.20.140 165 262 8.5E-37 T 22-04-2016 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 Gene3D G3DSA:3.20.20.140 12 95 8.5E-37 T 22-04-2016 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 PANTHER PTHR30007 13 286 1.0E-66 T 22-04-2016 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 Pfam PF02811 PHP domain 13 87 6.0E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 SMART SM00481 12 77 1.1E-11 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 SUPERFAMILY SSF89550 12 90 8.24E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RPIC_RS04850 9d4aef06cbe6ca8edd06512ce1b79c47 286 SUPERFAMILY SSF89550 173 284 8.24E-49 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 PANTHER PTHR33164:SF5 1 145 4.8E-54 T 22-04-2016 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 SUPERFAMILY SSF46785 11 147 6.65E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 Pfam PF01047 MarR family 43 101 2.1E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 PANTHER PTHR33164 1 145 4.8E-54 T 22-04-2016 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 96 112 6.5E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 77 92 6.5E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 76 6.5E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 SMART SM00347 36 137 7.9E-27 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS17050 6765a4ccd2dec569513dd7287669fb6a 153 Gene3D G3DSA:1.10.10.10 3 148 4.6E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12145 f388f878d5cae1e4ab55052933fd128f 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 225 2.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS12145 f388f878d5cae1e4ab55052933fd128f 231 PANTHER PTHR30085:SF1 11 231 5.5E-76 T 22-04-2016 RPIC_RS12145 f388f878d5cae1e4ab55052933fd128f 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 121 4.8E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS12145 f388f878d5cae1e4ab55052933fd128f 231 SUPERFAMILY SSF161098 16 212 3.4E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS12145 f388f878d5cae1e4ab55052933fd128f 231 PANTHER PTHR30085 11 231 5.5E-76 T 22-04-2016 RPIC_RS12145 f388f878d5cae1e4ab55052933fd128f 231 Gene3D G3DSA:1.10.3720.10 15 225 6.1E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 Gene3D G3DSA:3.90.226.10 184 384 2.9E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 Gene3D G3DSA:3.90.226.10 449 476 2.9E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 Gene3D G3DSA:2.30.42.10 108 183 3.0E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 Pfam PF03572 Peptidase family S41 200 381 1.9E-52 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 SUPERFAMILY SSF50156 95 185 6.02E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 Gene3D G3DSA:3.30.750.44 55 107 5.7E-10 T 22-04-2016 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 SMART SM00245 174 382 1.6E-58 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 384 6.9E-97 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 Pfam PF13180 PDZ domain 101 180 1.3E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 SMART SM00228 101 172 4.6E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 PANTHER PTHR32060 54 275 3.8E-114 T 22-04-2016 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 PANTHER PTHR32060 293 450 3.8E-114 T 22-04-2016 RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 SUPERFAMILY SSF52096 193 386 4.64E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01010 94ddac2321bb50b0572e9295f2043170 538 SUPERFAMILY SSF52096 30 119 4.64E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 5.0E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 PANTHER PTHR10909 11 381 1.2E-202 T 22-04-2016 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 SUPERFAMILY SSF47203 232 381 6.28E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 SUPERFAMILY SSF56645 9 246 2.62E-78 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 221 1.1E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 Gene3D G3DSA:2.40.110.10 128 221 1.0E-37 T 22-04-2016 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 Gene3D G3DSA:1.10.540.10 8 126 6.4E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 124 1.0E-29 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 PANTHER PTHR10909:SF204 11 381 1.2E-202 T 22-04-2016 RPIC_RS00495 dd5a17798d3579fec2182561dc8babdc 384 Gene3D G3DSA:1.20.140.10 222 381 4.2E-58 T 22-04-2016 RPIC_RS06485 3294efc39fbd7ef752c27fc94de9df09 314 Pfam PF00892 EamA-like transporter family 3 137 1.7E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS06485 3294efc39fbd7ef752c27fc94de9df09 314 SUPERFAMILY SSF103481 214 306 4.97E-6 T 22-04-2016 RPIC_RS06485 3294efc39fbd7ef752c27fc94de9df09 314 PANTHER PTHR12715:SF21 3 309 1.6E-71 T 22-04-2016 RPIC_RS06485 3294efc39fbd7ef752c27fc94de9df09 314 PANTHER PTHR12715 3 309 1.6E-71 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Pfam PF13193 AMP-binding enzyme C-terminal domain 482 557 1.1E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 ProSitePatterns PS00455 Putative AMP-binding domain signature. 223 234 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Pfam PF00501 AMP-binding enzyme 39 473 4.2E-107 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 PANTHER PTHR24096 188 566 5.7E-162 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 PANTHER PTHR24096 29 162 5.7E-162 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Gene3D G3DSA:3.40.50.980 229 391 1.1E-40 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Gene3D G3DSA:3.40.50.980 197 228 2.3E-42 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Gene3D G3DSA:3.40.50.980 34 161 2.3E-42 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 SUPERFAMILY SSF56801 25 568 2.62E-147 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Gene3D G3DSA:2.30.38.10 392 463 5.5E-28 T 22-04-2016 RPIC_RS02030 e2adf41aea94a67974901bada0afcaab 579 Gene3D G3DSA:3.30.300.30 468 565 2.0E-26 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 SMART SM00480 18 367 4.6E-114 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 7 119 5.7E-28 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 Gene3D G3DSA:3.10.150.10 127 253 1.5E-37 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 PANTHER PTHR30478 4 371 1.0E-116 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 SUPERFAMILY SSF55979 250 371 3.31E-37 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 370 2.3E-99 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 SUPERFAMILY SSF55979 5 117 1.03E-20 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 SUPERFAMILY SSF55979 128 249 3.37E-27 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 251 370 6.5E-35 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 248 1.8E-33 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 Gene3D G3DSA:3.10.150.10 254 371 8.0E-39 T 22-04-2016 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 PIRSF PIRSF000804 1 371 7.3E-113 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS00010 d131d20d2e73cbe9ddeff4b2af701a96 371 Gene3D G3DSA:3.10.150.10 5 119 3.2E-24 T 22-04-2016 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 434 33.445 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 430 1.4E-139 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 SUPERFAMILY SSF55205 1 431 5.49E-129 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 427 3.6E-129 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 Gene3D G3DSA:3.65.10.10 22 239 2.8E-71 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 PIRSF PIRSF000505 5 434 3.0E-144 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 Gene3D G3DSA:3.65.10.10 240 428 9.0E-72 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 PANTHER PTHR21090:SF21 1 429 1.4E-191 T 22-04-2016 RPIC_RS03805 ad89aa485d875d8c2ddf88be61929aaf 434 PANTHER PTHR21090 1 429 1.4E-191 T 22-04-2016 RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 PANTHER PTHR24064 3 414 6.6E-61 T 22-04-2016 RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 92 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 Gene3D G3DSA:1.20.1250.20 252 442 3.7E-25 T 22-04-2016 RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 Gene3D G3DSA:1.20.1250.20 14 198 1.5E-37 T 22-04-2016 RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 SUPERFAMILY SSF103473 10 429 2.75E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 Pfam PF07690 Major Facilitator Superfamily 27 330 6.0E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS12985 96b72834b3ee6144bacd81884b84a9ec 455 PANTHER PTHR24064:SF234 3 414 6.6E-61 T 22-04-2016 RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 Pfam PF13954 PapC N-terminal domain 59 203 7.1E-46 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 Pfam PF13953 PapC C-terminal domain 775 837 3.2E-17 T 22-04-2016 IPR025949 PapC-like, C-terminal domain RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 PANTHER PTHR30451:SF2 24 852 1.4E-276 T 22-04-2016 RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 SUPERFAMILY SSF141729 80 194 8.5E-36 T 22-04-2016 RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 Pfam PF00577 Outer membrane usher protein 218 765 7.9E-163 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 330 340 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site RPIC_RS03740 796360ed3881b0a68390e8d55c5c106c 852 PANTHER PTHR30451 24 852 1.4E-276 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 Pfam PF00072 Response regulator receiver domain 3 112 1.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 SMART SM00862 145 218 1.3E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.3E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 SMART SM00448 1 112 1.5E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 SUPERFAMILY SSF46894 120 219 1.56E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 PANTHER PTHR26402:SF518 1 220 1.1E-72 T 22-04-2016 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 SUPERFAMILY SSF52172 1 129 9.25E-35 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 Gene3D G3DSA:3.40.50.2300 1 120 2.2E-35 T 22-04-2016 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 PANTHER PTHR26402 1 220 1.1E-72 T 22-04-2016 RPIC_RS15855 3ff8dc3a61136030b0ec3a5e3d8ecbaa 233 Gene3D G3DSA:1.10.10.10 126 220 7.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06230 df0ec0ac00f125792fdcd3ce5e1f42ac 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 7.8E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06230 df0ec0ac00f125792fdcd3ce5e1f42ac 307 PANTHER PTHR30465 1 305 4.3E-179 T 22-04-2016 RPIC_RS06230 df0ec0ac00f125792fdcd3ce5e1f42ac 307 SUPERFAMILY SSF161098 90 288 2.22E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06230 df0ec0ac00f125792fdcd3ce5e1f42ac 307 Gene3D G3DSA:1.10.3720.10 86 299 2.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06230 df0ec0ac00f125792fdcd3ce5e1f42ac 307 PANTHER PTHR30465:SF59 1 305 4.3E-179 T 22-04-2016 RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 SUPERFAMILY SSF53822 36 384 3.14E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 Pfam PF13458 Periplasmic binding protein 36 370 9.9E-70 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 Gene3D G3DSA:3.40.50.2300 35 236 1.3E-57 T 22-04-2016 RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 PANTHER PTHR30483:SF11 2 384 8.4E-77 T 22-04-2016 RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 PANTHER PTHR30483 2 384 8.4E-77 T 22-04-2016 RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 58 74 6.1E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 267 285 6.1E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS15335 66774c8de7fc01a8c336718ed1ddd97a 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 6.1E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS14265 b3e2bcc35597c69f962e64e9082764d1 289 PANTHER PTHR23088:SF27 22 287 6.4E-98 T 22-04-2016 RPIC_RS14265 b3e2bcc35597c69f962e64e9082764d1 289 Gene3D G3DSA:3.60.110.10 21 287 2.8E-85 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS14265 b3e2bcc35597c69f962e64e9082764d1 289 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 171 191 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site RPIC_RS14265 b3e2bcc35597c69f962e64e9082764d1 289 PANTHER PTHR23088 22 287 6.4E-98 T 22-04-2016 RPIC_RS14265 b3e2bcc35597c69f962e64e9082764d1 289 Pfam PF00795 Carbon-nitrogen hydrolase 24 279 4.6E-55 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS14265 b3e2bcc35597c69f962e64e9082764d1 289 SUPERFAMILY SSF56317 22 287 1.27E-81 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 PANTHER PTHR30108:SF2 15 206 8.2E-78 T 22-04-2016 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 15 202 37.793 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 PANTHER PTHR30108 15 206 8.2E-78 T 22-04-2016 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 Gene3D G3DSA:3.40.50.1950 15 202 2.5E-79 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 16 200 6.3E-72 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 SUPERFAMILY SSF52507 15 202 5.36E-63 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC_RS15555 a4e0c0c0dc91a62b4af1b4fde697f62a 207 Pfam PF02441 Flavoprotein 16 143 4.6E-27 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC_RS06985 5989271cf151cccd2027b6f301fe29d3 491 Pfam PF01425 Amidase 39 470 1.7E-88 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS06985 5989271cf151cccd2027b6f301fe29d3 491 PANTHER PTHR11895:SF76 16 488 8.3E-177 T 22-04-2016 RPIC_RS06985 5989271cf151cccd2027b6f301fe29d3 491 SUPERFAMILY SSF75304 13 480 1.2E-123 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS06985 5989271cf151cccd2027b6f301fe29d3 491 PANTHER PTHR11895 16 488 8.3E-177 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS06985 5989271cf151cccd2027b6f301fe29d3 491 Gene3D G3DSA:3.90.1300.10 15 484 1.1E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS03405 6bf269b28686029d42fbf7936d9478cd 300 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 22 293 6.8E-61 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 RPIC_RS03405 6bf269b28686029d42fbf7936d9478cd 300 SUPERFAMILY SSF51197 26 300 5.49E-81 T 22-04-2016 RPIC_RS03405 6bf269b28686029d42fbf7936d9478cd 300 PANTHER PTHR30468 1 299 3.6E-119 T 22-04-2016 RPIC_RS03405 6bf269b28686029d42fbf7936d9478cd 300 Gene3D G3DSA:3.60.130.10 17 300 1.1E-83 T 22-04-2016 RPIC_RS03405 6bf269b28686029d42fbf7936d9478cd 300 PANTHER PTHR30468:SF18 1 299 3.6E-119 T 22-04-2016 RPIC_RS00770 157c10eda7c5f8248c00f54c1a2b8c43 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 39 270 4.9E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS00770 157c10eda7c5f8248c00f54c1a2b8c43 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 114 134 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC_RS00770 157c10eda7c5f8248c00f54c1a2b8c43 272 PANTHER PTHR11941:SF15 1 269 5.9E-115 T 22-04-2016 RPIC_RS00770 157c10eda7c5f8248c00f54c1a2b8c43 272 PANTHER PTHR11941 1 269 5.9E-115 T 22-04-2016 RPIC_RS00770 157c10eda7c5f8248c00f54c1a2b8c43 272 SUPERFAMILY SSF52096 16 269 2.15E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00770 157c10eda7c5f8248c00f54c1a2b8c43 272 Gene3D G3DSA:3.90.226.10 9 266 1.2E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 Gene3D G3DSA:3.40.50.300 11 171 1.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 Pfam PF13177 DNA polymerase III, delta subunit 18 182 4.2E-40 T 22-04-2016 RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 PANTHER PTHR11669 106 195 6.8E-49 T 22-04-2016 RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 PANTHER PTHR11669 15 85 6.8E-49 T 22-04-2016 RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 PANTHER PTHR11669:SF8 106 195 6.8E-49 T 22-04-2016 RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 PANTHER PTHR11669:SF8 15 85 6.8E-49 T 22-04-2016 RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 Gene3D G3DSA:1.10.8.60 172 204 6.7E-4 T 22-04-2016 RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 SUPERFAMILY SSF52540 17 206 6.09E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07050 2459c6f60582272f90d7ff7d451e02aa 336 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 208 6.2E-61 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS03605 24aa3df145a0d76d81aa2a1097d5f4ab 73 PANTHER PTHR32319 7 69 1.8E-17 T 22-04-2016 RPIC_RS03605 24aa3df145a0d76d81aa2a1097d5f4ab 73 Pfam PF13275 S4 domain 7 69 2.5E-23 T 22-04-2016 RPIC_RS03605 24aa3df145a0d76d81aa2a1097d5f4ab 73 PANTHER PTHR32319:SF3 7 69 1.8E-17 T 22-04-2016 RPIC_RS03605 24aa3df145a0d76d81aa2a1097d5f4ab 73 SUPERFAMILY SSF55174 4 69 2.55E-17 T 22-04-2016 RPIC_RS03605 24aa3df145a0d76d81aa2a1097d5f4ab 73 Gene3D G3DSA:3.10.290.10 1 69 1.8E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 SUPERFAMILY SSF53335 190 568 6.66E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 PANTHER PTHR30195:SF2 286 535 2.7E-15 T 22-04-2016 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 Pfam PF02384 N-6 DNA Methylase 293 545 1.0E-32 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 PANTHER PTHR30195 286 535 2.7E-15 T 22-04-2016 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 Gene3D G3DSA:3.40.50.150 317 531 3.0E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 338 352 1.6E-11 T 22-04-2016 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 451 475 1.6E-11 T 22-04-2016 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 435 447 1.6E-11 T 22-04-2016 RPIC_RS00020 9c0a6d4bda8c5a78280db825082e3aff 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 330 1.6E-11 T 22-04-2016 RPIC_RS13215 08d52e9f26c9555fd8b776e53450095e 133 SUPERFAMILY SSF55331 2 126 1.56E-34 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RPIC_RS13215 08d52e9f26c9555fd8b776e53450095e 133 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 2.4E-31 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 RPIC_RS13215 08d52e9f26c9555fd8b776e53450095e 133 Gene3D G3DSA:3.30.429.10 2 126 6.8E-42 T 22-04-2016 RPIC_RS13215 08d52e9f26c9555fd8b776e53450095e 133 PANTHER PTHR37950:SF1 2 131 8.4E-32 T 22-04-2016 RPIC_RS13215 08d52e9f26c9555fd8b776e53450095e 133 PANTHER PTHR37950 2 131 8.4E-32 T 22-04-2016 RPIC_RS08100 7663938a1429513358b10169232ea2b1 434 Gene3D G3DSA:1.20.1600.10 28 414 1.0E-35 T 22-04-2016 RPIC_RS08100 7663938a1429513358b10169232ea2b1 434 Pfam PF02321 Outer membrane efflux protein 240 417 2.3E-13 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08100 7663938a1429513358b10169232ea2b1 434 Pfam PF02321 Outer membrane efflux protein 35 220 1.3E-15 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08100 7663938a1429513358b10169232ea2b1 434 SUPERFAMILY SSF56954 7 416 2.09E-51 T 22-04-2016 RPIC_RS08100 7663938a1429513358b10169232ea2b1 434 PANTHER PTHR30203:SF1 11 418 3.3E-18 T 22-04-2016 RPIC_RS08100 7663938a1429513358b10169232ea2b1 434 PANTHER PTHR30203 11 418 3.3E-18 T 22-04-2016 RPIC_RS18300 604556db6a0483e01059bb5912ed0b5c 348 Pfam PF04085 rod shape-determining protein MreC 127 273 3.8E-36 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RPIC_RS18300 604556db6a0483e01059bb5912ed0b5c 348 PANTHER PTHR34138:SF1 5 348 2.4E-66 T 22-04-2016 RPIC_RS18300 604556db6a0483e01059bb5912ed0b5c 348 PANTHER PTHR34138 5 348 2.4E-66 T 22-04-2016 RPIC_RS18300 604556db6a0483e01059bb5912ed0b5c 348 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 277 1.0E-47 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 RPIC_RS16115 e167a5ce59db191e69d7a46c75659de5 734 Pfam PF05140 ResB-like family 28 704 4.8E-161 T 22-04-2016 IPR007816 ResB-like domain RPIC_RS16115 e167a5ce59db191e69d7a46c75659de5 734 PANTHER PTHR31566 15 194 3.9E-37 T 22-04-2016 RPIC_RS16115 e167a5ce59db191e69d7a46c75659de5 734 PANTHER PTHR31566 587 733 3.9E-37 T 22-04-2016 RPIC_RS16115 e167a5ce59db191e69d7a46c75659de5 734 PANTHER PTHR31566 229 445 3.9E-37 T 22-04-2016 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 Pfam PF03466 LysR substrate binding domain 90 293 4.6E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 3.3E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 SUPERFAMILY SSF46785 5 112 3.82E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 SUPERFAMILY SSF53850 90 296 4.16E-37 T 22-04-2016 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 Gene3D G3DSA:3.40.190.10 94 182 3.9E-15 T 22-04-2016 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 Gene3D G3DSA:1.10.10.10 4 83 8.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 Gene3D G3DSA:3.40.190.10 183 259 1.6E-7 T 22-04-2016 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06735 b6a0720c9bfcab321836e51e6389eda8 321 PANTHER PTHR30537 1 311 3.0E-83 T 22-04-2016 RPIC_RS18405 1648abeefc59e023e81bb76e22a3159d 67 Gene3D G3DSA:1.10.1470.10 1 65 4.6E-32 T 22-04-2016 IPR008462 CsbD-like RPIC_RS18405 1648abeefc59e023e81bb76e22a3159d 67 SUPERFAMILY SSF69047 1 66 1.16E-27 T 22-04-2016 IPR008462 CsbD-like RPIC_RS18405 1648abeefc59e023e81bb76e22a3159d 67 Pfam PF05532 CsbD-like 4 56 3.6E-23 T 22-04-2016 IPR008462 CsbD-like RPIC_RS18405 1648abeefc59e023e81bb76e22a3159d 67 PIRSF PIRSF039008 1 66 1.8E-31 T 22-04-2016 IPR026042 Stress response protein YjbJ RPIC_RS18405 1648abeefc59e023e81bb76e22a3159d 67 PANTHER PTHR34977 1 62 2.7E-17 T 22-04-2016 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 PANTHER PTHR32179 6 299 3.0E-115 T 22-04-2016 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 Gene3D G3DSA:3.20.20.70 153 286 1.3E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 130 1.4E-22 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 PIRSF PIRSF006250 25 299 3.6E-90 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 SUPERFAMILY SSF51690 132 297 5.49E-56 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 34 297 4.8E-88 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 132 296 2.3E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 Gene3D G3DSA:3.90.1170.20 27 152 1.6E-46 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 RPIC_RS13380 437f89cc9c09ef00bb6adaba62598dca 299 SUPERFAMILY SSF54675 27 131 2.83E-31 T 22-04-2016 RPIC_RS07565 2300512d4d832e3dfdbf3c32f8e15a44 257 SUPERFAMILY SSF53955 121 251 1.25E-12 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS07565 2300512d4d832e3dfdbf3c32f8e15a44 257 Gene3D G3DSA:1.10.530.10 121 231 9.8E-6 T 22-04-2016 RPIC_RS08005 1dc767a55311be8e460b2527f7b65fc1 243 Gene3D G3DSA:1.25.40.10 143 198 1.7E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS08005 1dc767a55311be8e460b2527f7b65fc1 243 SUPERFAMILY SSF81901 135 198 7.59E-5 T 22-04-2016 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 106 129 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 Gene3D G3DSA:3.40.50.720 190 369 1.9E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 163 6.8E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 SUPERFAMILY SSF69742 1 165 2.22E-44 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 PIRSF PIRSF000445 1 435 1.4E-147 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 SUPERFAMILY SSF69075 329 428 3.14E-29 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 179 317 4.1E-45 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 430 29.296 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 PANTHER PTHR21089:SF3 284 371 7.3E-109 T 22-04-2016 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 PANTHER PTHR21089:SF3 77 268 7.3E-109 T 22-04-2016 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 332 427 5.5E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 427 1.2E-124 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 PANTHER PTHR21089 284 371 7.3E-109 T 22-04-2016 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 PANTHER PTHR21089 77 268 7.3E-109 T 22-04-2016 RPIC_RS15525 4abf7b941189745d4b5ec63656fcc87d 435 SUPERFAMILY SSF51735 170 324 1.79E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 PANTHER PTHR11271 20 465 9.8E-182 T 22-04-2016 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 Gene3D G3DSA:3.20.20.140 79 397 2.3E-111 T 22-04-2016 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 SUPERFAMILY SSF51338 389 460 1.15E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 SUPERFAMILY SSF51338 19 76 1.15E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 SUPERFAMILY SSF51556 76 389 1.09E-99 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 Pfam PF01979 Amidohydrolase family 73 438 1.8E-63 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 Gene3D G3DSA:2.30.40.10 21 78 1.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 Gene3D G3DSA:2.30.40.10 398 441 1.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11120 b5e31f07236696d4e010b3d9c0929984 472 PANTHER PTHR11271:SF37 20 465 9.8E-182 T 22-04-2016 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 TIGRFAM TIGR00552 nadE: NAD+ synthetase 278 522 1.8E-60 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 SUPERFAMILY SSF52402 269 528 6.52E-76 T 22-04-2016 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 SUPERFAMILY SSF56317 3 253 6.02E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 Gene3D G3DSA:3.60.110.10 2 252 1.3E-63 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 PANTHER PTHR23090 2 543 2.5E-159 T 22-04-2016 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 Gene3D G3DSA:3.40.50.620 269 527 2.9E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 Pfam PF00795 Carbon-nitrogen hydrolase 5 252 2.0E-30 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS12615 92ae7ae6635d8ba9b50ea2a0c2b1a2e9 545 Pfam PF02540 NAD synthase 272 520 6.6E-73 T 22-04-2016 IPR022310 NAD/GMP synthase RPIC_RS01255 bfee5dd5010aced2deac7327fead26fc 217 PANTHER PTHR23327 18 134 3.4E-23 T 22-04-2016 RPIC_RS01255 bfee5dd5010aced2deac7327fead26fc 217 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 19 213 1.0E-25 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC_RS01255 bfee5dd5010aced2deac7327fead26fc 217 SMART SM00464 19 213 2.5E-13 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 RPIC_RS01255 bfee5dd5010aced2deac7327fead26fc 217 PANTHER PTHR23327:SF0 18 134 3.4E-23 T 22-04-2016 RPIC_RS01255 bfee5dd5010aced2deac7327fead26fc 217 SUPERFAMILY SSF88697 19 212 1.02E-50 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS03085 ed3253f5f7ff3f3910d30f64bca5fe36 415 PANTHER PTHR30250 2 401 9.9E-38 T 22-04-2016 RPIC_RS03085 ed3253f5f7ff3f3910d30f64bca5fe36 415 PANTHER PTHR30250:SF9 2 401 9.9E-38 T 22-04-2016 RPIC_RS03085 ed3253f5f7ff3f3910d30f64bca5fe36 415 Pfam PF01943 Polysaccharide biosynthesis protein 5 283 5.5E-15 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 PANTHER PTHR30327:SF1 6 190 2.1E-60 T 22-04-2016 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 PANTHER PTHR30327 6 190 2.1E-60 T 22-04-2016 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 190 38.122 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 SUPERFAMILY SSF143456 8 190 3.92E-66 T 22-04-2016 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 Pfam PF02622 Uncharacterized ACR, COG1678 19 177 9.4E-50 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 Gene3D G3DSA:3.40.1740.10 134 181 3.3E-35 T 22-04-2016 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 Gene3D G3DSA:3.40.1740.10 8 47 3.3E-35 T 22-04-2016 RPIC_RS03015 71197ad25738ae0dcf833ae46c2d0e54 190 Gene3D G3DSA:3.30.70.1300 48 133 8.7E-31 T 22-04-2016 RPIC_RS06835 022e37ac4c6fe73cbc4b3f2e167f1deb 331 Pfam PF00682 HMGL-like 17 289 4.3E-50 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC_RS06835 022e37ac4c6fe73cbc4b3f2e167f1deb 331 Gene3D G3DSA:3.20.20.70 15 297 1.9E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS06835 022e37ac4c6fe73cbc4b3f2e167f1deb 331 PANTHER PTHR10277:SF1 1 308 5.9E-116 T 22-04-2016 RPIC_RS06835 022e37ac4c6fe73cbc4b3f2e167f1deb 331 PANTHER PTHR10277 1 308 5.9E-116 T 22-04-2016 RPIC_RS06835 022e37ac4c6fe73cbc4b3f2e167f1deb 331 SUPERFAMILY SSF51569 14 307 2.93E-75 T 22-04-2016 RPIC_RS10780 37044a859cd908af638e173e848b7853 418 PANTHER PTHR30483:SF8 3 418 2.7E-215 T 22-04-2016 RPIC_RS10780 37044a859cd908af638e173e848b7853 418 Gene3D G3DSA:3.40.50.2300 147 346 1.2E-75 T 22-04-2016 RPIC_RS10780 37044a859cd908af638e173e848b7853 418 SUPERFAMILY SSF53822 31 409 3.64E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS10780 37044a859cd908af638e173e848b7853 418 Pfam PF13433 Periplasmic binding protein domain 32 407 6.1E-173 T 22-04-2016 RPIC_RS10780 37044a859cd908af638e173e848b7853 418 PANTHER PTHR30483 3 418 2.7E-215 T 22-04-2016 RPIC_RS10780 37044a859cd908af638e173e848b7853 418 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 32 404 2.5E-181 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 SMART SM00116 324 372 6.4E-6 T 22-04-2016 IPR000644 CBS domain RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 SMART SM00116 248 296 5.7E-14 T 22-04-2016 IPR000644 CBS domain RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 Pfam PF04982 HPP family 60 180 3.1E-35 T 22-04-2016 IPR007065 HPP RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 Gene3D G3DSA:3.10.580.10 237 373 6.7E-33 T 22-04-2016 RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 PANTHER PTHR33741 8 291 3.1E-30 T 22-04-2016 RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 SUPERFAMILY SSF54631 228 373 6.09E-33 T 22-04-2016 RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 Pfam PF00571 CBS domain 242 293 1.0E-13 T 22-04-2016 IPR000644 CBS domain RPIC_RS00140 eadbe16fd96da0228a6b7375550d9031 382 Pfam PF00571 CBS domain 317 368 4.3E-10 T 22-04-2016 IPR000644 CBS domain RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 Pfam PF00005 ABC transporter 25 166 1.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 SMART SM00382 33 216 1.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 PANTHER PTHR24220 10 221 7.4E-144 T 22-04-2016 RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 Gene3D G3DSA:3.40.50.300 8 221 5.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 SUPERFAMILY SSF52540 9 221 2.03E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS23845 a6314827c77c87db4cce057edfddeddb 221 PANTHER PTHR24220:SF151 10 221 7.4E-144 T 22-04-2016 RPIC_RS09780 9204235aa4aa32d306047a67b85c39ae 137 Gene3D G3DSA:3.10.50.40 17 135 3.7E-47 T 22-04-2016 RPIC_RS09780 9204235aa4aa32d306047a67b85c39ae 137 SUPERFAMILY SSF54534 28 135 3.93E-44 T 22-04-2016 RPIC_RS09780 9204235aa4aa32d306047a67b85c39ae 137 PANTHER PTHR10516 10 135 1.9E-50 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC_RS09780 9204235aa4aa32d306047a67b85c39ae 137 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 45 133 1.1E-29 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC_RS00535 ef2929d07a12fc4e9165ece98711dfc6 88 PANTHER PTHR35175 2 78 1.1E-18 T 22-04-2016 RPIC_RS00535 ef2929d07a12fc4e9165ece98711dfc6 88 Pfam PF06945 Protein of unknown function (DUF1289) 31 77 3.0E-22 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 RPIC_RS00535 ef2929d07a12fc4e9165ece98711dfc6 88 PANTHER PTHR35175:SF2 2 78 1.1E-18 T 22-04-2016 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 329 7.2E-123 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 315 4.6E-48 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 Gene3D G3DSA:3.40.50.2000 1 164 5.3E-32 T 22-04-2016 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 SUPERFAMILY SSF53756 1 317 1.88E-70 T 22-04-2016 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 PANTHER PTHR30160 1 302 1.7E-64 T 22-04-2016 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 PANTHER PTHR30160:SF8 1 302 1.7E-64 T 22-04-2016 RPIC_RS03130 b78df053dd752c47f29e383d3877cde7 332 Gene3D G3DSA:3.40.50.2000 178 308 4.2E-32 T 22-04-2016 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 Gene3D G3DSA:3.90.226.10 57 274 3.5E-47 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PANTHER PTHR22855 1 318 3.5E-124 T 22-04-2016 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 3.0E-148 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 SUPERFAMILY SSF52096 5 316 2.72E-100 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.8E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 PANTHER PTHR22855:SF42 1 318 3.5E-124 T 22-04-2016 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.475 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS04995 bac9d824b24b690944a00a56d37c97a1 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 148 2.3E-65 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 RPIC_RS12835 69ee012a909079542a871f9c359e4953 751 Pfam PF00899 ThiF family 363 470 8.7E-12 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS12835 69ee012a909079542a871f9c359e4953 751 Pfam PF14464 Prokaryotic homologs of the JAB domain 626 739 1.8E-13 T 22-04-2016 IPR028090 JAB domain, prokaryotic RPIC_RS12835 69ee012a909079542a871f9c359e4953 751 Gene3D G3DSA:3.40.50.720 363 469 8.2E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12835 69ee012a909079542a871f9c359e4953 751 Pfam PF14457 Prokaryotic E2 family A 6 164 3.2E-54 T 22-04-2016 IPR032865 Prokaryotic E2 family A RPIC_RS12835 69ee012a909079542a871f9c359e4953 751 SUPERFAMILY SSF69572 364 472 1.2E-10 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.3E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.8E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 SUPERFAMILY SSF47729 1 90 2.36E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 PANTHER PTHR33175 1 90 4.1E-36 T 22-04-2016 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC_RS09155 314f4c83e078085433f3b2ab93eedff2 90 SMART SM00411 1 90 4.2E-35 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 PANTHER PTHR10992 20 289 7.6E-30 T 22-04-2016 RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 Gene3D G3DSA:3.40.50.1820 19 286 1.6E-75 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 SUPERFAMILY SSF53474 19 282 9.24E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 Pfam PF12697 Alpha/beta hydrolase family 35 280 1.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 5.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 233 247 5.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 5.7E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09740 bcbbad276c8f547b2e41dcf18f957859 289 PANTHER PTHR10992:SF771 20 289 7.6E-30 T 22-04-2016 RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 Pfam PF00281 Ribosomal protein L5 25 81 3.4E-25 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 PANTHER PTHR11994 1 179 2.7E-86 T 22-04-2016 RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 PIRSF PIRSF002161 1 180 1.1E-61 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 SUPERFAMILY SSF55282 4 180 2.03E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.867 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 6.3E-39 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal RPIC_RS16220 d4f0e1d1b92388f00afdf310e086d5af 180 Gene3D G3DSA:3.30.1440.10 3 180 6.1E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 SUPERFAMILY SSF54593 1 348 3.01E-84 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 Gene3D G3DSA:3.10.180.10 167 363 2.2E-69 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 PANTHER PTHR11959 1 368 6.2E-120 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 361 2.2E-116 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 153 4.8E-65 T 22-04-2016 RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 Gene3D G3DSA:3.10.180.10 5 161 1.5E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 PIRSF PIRSF009283 1 362 7.3E-118 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 PANTHER PTHR11959:SF1 1 368 6.2E-120 T 22-04-2016 RPIC_RS16775 c47a06cb875f75e416d5957f58207729 368 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 171 282 3.2E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 Gene3D G3DSA:1.10.10.10 13 87 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 SMART SM00345 21 80 5.5E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 SMART SM00895 102 230 1.2E-24 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 SUPERFAMILY SSF48008 98 238 1.26E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 Gene3D G3DSA:1.20.120.530 96 240 3.6E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 9.4E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 3.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 3.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 PANTHER PTHR11751 19 118 5.3E-29 T 22-04-2016 RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 SUPERFAMILY SSF46785 12 84 1.45E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04665 0978de76b17d0440dfb6ec8a0a7b284f 251 Pfam PF07729 FCD domain 103 229 7.8E-26 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 Pfam PF03466 LysR substrate binding domain 87 294 3.3E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 SUPERFAMILY SSF53850 89 299 8.87E-39 T 22-04-2016 RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 Gene3D G3DSA:1.10.10.10 1 84 1.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 PANTHER PTHR30537:SF5 1 298 5.6E-97 T 22-04-2016 RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 SUPERFAMILY SSF46785 1 86 8.02E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 PANTHER PTHR30537 1 298 5.6E-97 T 22-04-2016 RPIC_RS02075 416ffcb1cf39f923e47bcaf523a03f71 305 Gene3D G3DSA:3.40.190.10 91 190 1.8E-21 T 22-04-2016 RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 SMART SM00650 28 198 1.7E-78 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 265 1.0E-58 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 12 267 54.705 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 44 71 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 SUPERFAMILY SSF53335 9 266 1.37E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 Gene3D G3DSA:1.10.8.100 204 266 3.1E-19 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 13 266 8.7E-79 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 PANTHER PTHR11727 10 271 9.8E-89 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RPIC_RS01935 e2896cedca93a5c1ea6898685f424f36 281 Gene3D G3DSA:3.40.50.150 9 196 3.7E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS13605 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 21 106 1.3E-13 T 22-04-2016 RPIC_RS13605 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 123 342 1.3E-13 T 22-04-2016 RPIC_RS13605 5f4522f2bd77628e11340ed641204263 352 SUPERFAMILY SSF46689 18 137 1.16E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13605 5f4522f2bd77628e11340ed641204263 352 Pfam PF13358 DDE superfamily endonuclease 177 317 1.9E-32 T 22-04-2016 RPIC_RS13605 5f4522f2bd77628e11340ed641204263 352 Pfam PF13592 Winged helix-turn helix 103 161 5.9E-21 T 22-04-2016 IPR025959 Winged helix-turn helix domain RPIC_RS13605 5f4522f2bd77628e11340ed641204263 352 Pfam PF13551 Winged helix-turn helix 23 85 4.4E-17 T 22-04-2016 RPIC_RS07375 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 21 106 1.3E-13 T 22-04-2016 RPIC_RS07375 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 123 342 1.3E-13 T 22-04-2016 RPIC_RS07375 5f4522f2bd77628e11340ed641204263 352 SUPERFAMILY SSF46689 18 137 1.16E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07375 5f4522f2bd77628e11340ed641204263 352 Pfam PF13358 DDE superfamily endonuclease 177 317 1.9E-32 T 22-04-2016 RPIC_RS07375 5f4522f2bd77628e11340ed641204263 352 Pfam PF13592 Winged helix-turn helix 103 161 5.9E-21 T 22-04-2016 IPR025959 Winged helix-turn helix domain RPIC_RS07375 5f4522f2bd77628e11340ed641204263 352 Pfam PF13551 Winged helix-turn helix 23 85 4.4E-17 T 22-04-2016 RPIC_RS05725 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 21 106 1.3E-13 T 22-04-2016 RPIC_RS05725 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 123 342 1.3E-13 T 22-04-2016 RPIC_RS05725 5f4522f2bd77628e11340ed641204263 352 SUPERFAMILY SSF46689 18 137 1.16E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05725 5f4522f2bd77628e11340ed641204263 352 Pfam PF13358 DDE superfamily endonuclease 177 317 1.9E-32 T 22-04-2016 RPIC_RS05725 5f4522f2bd77628e11340ed641204263 352 Pfam PF13592 Winged helix-turn helix 103 161 5.9E-21 T 22-04-2016 IPR025959 Winged helix-turn helix domain RPIC_RS05725 5f4522f2bd77628e11340ed641204263 352 Pfam PF13551 Winged helix-turn helix 23 85 4.4E-17 T 22-04-2016 RPIC_RS08605 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 21 106 1.3E-13 T 22-04-2016 RPIC_RS08605 5f4522f2bd77628e11340ed641204263 352 PANTHER PTHR23022 123 342 1.3E-13 T 22-04-2016 RPIC_RS08605 5f4522f2bd77628e11340ed641204263 352 SUPERFAMILY SSF46689 18 137 1.16E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS08605 5f4522f2bd77628e11340ed641204263 352 Pfam PF13358 DDE superfamily endonuclease 177 317 1.9E-32 T 22-04-2016 RPIC_RS08605 5f4522f2bd77628e11340ed641204263 352 Pfam PF13592 Winged helix-turn helix 103 161 5.9E-21 T 22-04-2016 IPR025959 Winged helix-turn helix domain RPIC_RS08605 5f4522f2bd77628e11340ed641204263 352 Pfam PF13551 Winged helix-turn helix 23 85 4.4E-17 T 22-04-2016 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 Pfam PF00899 ThiF family 29 296 1.8E-33 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 Gene3D G3DSA:3.40.50.720 265 299 1.5E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 Gene3D G3DSA:3.40.50.720 14 233 1.5E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 SUPERFAMILY SSF69572 16 299 1.12E-59 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 PANTHER PTHR10953:SF159 258 298 4.0E-88 T 22-04-2016 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 PANTHER PTHR10953:SF159 208 225 4.0E-88 T 22-04-2016 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 PANTHER PTHR10953:SF159 21 175 4.0E-88 T 22-04-2016 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 PANTHER PTHR10953 258 298 4.0E-88 T 22-04-2016 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 PANTHER PTHR10953 208 225 4.0E-88 T 22-04-2016 RPIC_RS03535 4c5a707fd36c37e1ebb60fd4bf7b46de 300 PANTHER PTHR10953 21 175 4.0E-88 T 22-04-2016 RPIC_RS17855 b547f4e6ca67f6259110e7e49be3b82c 144 PANTHER PTHR12418:SF25 6 144 5.9E-31 T 22-04-2016 RPIC_RS17855 b547f4e6ca67f6259110e7e49be3b82c 144 Gene3D G3DSA:3.10.129.10 5 144 1.1E-56 T 22-04-2016 IPR029069 HotDog domain RPIC_RS17855 b547f4e6ca67f6259110e7e49be3b82c 144 SUPERFAMILY SSF54637 5 140 1.01E-35 T 22-04-2016 IPR029069 HotDog domain RPIC_RS17855 b547f4e6ca67f6259110e7e49be3b82c 144 Pfam PF03061 Thioesterase superfamily 56 132 8.0E-11 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS17855 b547f4e6ca67f6259110e7e49be3b82c 144 PANTHER PTHR12418 6 144 5.9E-31 T 22-04-2016 RPIC_RS17855 b547f4e6ca67f6259110e7e49be3b82c 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 33 141 1.6E-18 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 Pfam PF00579 tRNA synthetases class I (W and Y) 59 339 8.5E-74 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 Gene3D G3DSA:1.10.240.10 254 351 3.9E-34 T 22-04-2016 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 PANTHER PTHR11766:SF1 26 421 6.7E-219 T 22-04-2016 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 24 420 46.986 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 237 249 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 72 94 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 204 226 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 202 1.3E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 SUPERFAMILY SSF55174 342 417 8.51E-19 T 22-04-2016 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 Gene3D G3DSA:3.40.50.620 47 253 3.4E-79 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 44 420 3.1E-117 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 PANTHER PTHR11766 26 421 6.7E-219 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 SMART SM00363 360 421 5.9E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 Pfam PF01479 S4 domain 362 405 6.5E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 68 78 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 Gene3D G3DSA:3.10.290.10 352 420 1.2E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS01825 03d7e13a38549ab2ec14462d709e6e1f 421 SUPERFAMILY SSF52374 45 338 6.44E-89 T 22-04-2016 RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 PANTHER PTHR31793:SF9 1 143 6.8E-24 T 22-04-2016 RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 Pfam PF03061 Thioesterase superfamily 23 108 1.3E-16 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 PANTHER PTHR31793 1 143 6.8E-24 T 22-04-2016 RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 121 1.7E-29 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 Gene3D G3DSA:3.10.129.10 3 143 3.7E-42 T 22-04-2016 IPR029069 HotDog domain RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 PIRSF PIRSF003230 2 145 1.1E-22 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC_RS07095 54d00aab3bbb3d6a9a331b4ae1839f9d 149 SUPERFAMILY SSF54637 2 142 1.96E-37 T 22-04-2016 IPR029069 HotDog domain RPIC_RS10515 dde3f44f9bd57f94ded6ea75fb41cd58 233 PANTHER PTHR22854 5 222 2.2E-56 T 22-04-2016 RPIC_RS10515 dde3f44f9bd57f94ded6ea75fb41cd58 233 PANTHER PTHR22854:SF6 5 222 2.2E-56 T 22-04-2016 RPIC_RS10515 dde3f44f9bd57f94ded6ea75fb41cd58 233 SUPERFAMILY SSF51366 6 221 7.06E-54 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS10515 dde3f44f9bd57f94ded6ea75fb41cd58 233 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 6 223 39.916 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RPIC_RS10515 dde3f44f9bd57f94ded6ea75fb41cd58 233 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 9 218 2.2E-42 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 RPIC_RS10515 dde3f44f9bd57f94ded6ea75fb41cd58 233 Gene3D G3DSA:3.20.20.70 6 222 1.6E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS04295 ea3b4081418b954a1b66adf58ca95c2f 423 PIRSF PIRSF020818 1 422 3.0E-200 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RPIC_RS04295 ea3b4081418b954a1b66adf58ca95c2f 423 Gene3D G3DSA:3.40.50.1820 106 411 1.5E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04295 ea3b4081418b954a1b66adf58ca95c2f 423 Pfam PF06850 PHB de-polymerase C-terminus 211 412 2.9E-97 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal RPIC_RS04295 ea3b4081418b954a1b66adf58ca95c2f 423 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 412 8.8E-182 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase RPIC_RS04295 ea3b4081418b954a1b66adf58ca95c2f 423 SUPERFAMILY SSF53474 107 410 6.51E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS08925 9840b9c1b6ae9ae47844d01779595e10 164 PANTHER PTHR11717:SF18 4 161 3.9E-30 T 22-04-2016 RPIC_RS08925 9840b9c1b6ae9ae47844d01779595e10 164 SMART SM00226 3 144 2.2E-27 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS08925 9840b9c1b6ae9ae47844d01779595e10 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 3.2E-14 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS08925 9840b9c1b6ae9ae47844d01779595e10 164 PANTHER PTHR11717 4 161 3.9E-30 T 22-04-2016 RPIC_RS08925 9840b9c1b6ae9ae47844d01779595e10 164 SUPERFAMILY SSF52788 3 144 8.24E-35 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS08925 9840b9c1b6ae9ae47844d01779595e10 164 Gene3D G3DSA:3.40.50.270 2 142 2.2E-37 T 22-04-2016 RPIC_RS05795 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Pfam PF01527 Transposase 11 68 3.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS05795 326bce1d7e5c3d678a3e0a8d4d8363fc 123 SUPERFAMILY SSF48295 9 57 1.52E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS05795 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Gene3D G3DSA:1.10.10.60 17 61 2.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07355 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Pfam PF01527 Transposase 11 68 3.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS07355 326bce1d7e5c3d678a3e0a8d4d8363fc 123 SUPERFAMILY SSF48295 9 57 1.52E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS07355 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Gene3D G3DSA:1.10.10.60 17 61 2.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16435 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Pfam PF01527 Transposase 11 68 3.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS16435 326bce1d7e5c3d678a3e0a8d4d8363fc 123 SUPERFAMILY SSF48295 9 57 1.52E-11 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS16435 326bce1d7e5c3d678a3e0a8d4d8363fc 123 Gene3D G3DSA:1.10.10.60 17 61 2.2E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS17720 164f39929343d898c91e0c095316b531 390 PANTHER PTHR33567:SF1 12 379 2.2E-61 T 22-04-2016 RPIC_RS17720 164f39929343d898c91e0c095316b531 390 PANTHER PTHR33567 12 379 2.2E-61 T 22-04-2016 RPIC_RS17720 164f39929343d898c91e0c095316b531 390 Pfam PF02417 Chromate transporter 14 178 2.4E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC_RS17720 164f39929343d898c91e0c095316b531 390 Pfam PF02417 Chromate transporter 218 381 2.0E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC_RS17720 164f39929343d898c91e0c095316b531 390 TIGRFAM TIGR00937 2A51: chromate efflux transporter 19 381 3.0E-139 T 22-04-2016 IPR014047 Chromate transporter, long chain RPIC_RS17720 164f39929343d898c91e0c095316b531 390 PIRSF PIRSF004810 3 388 2.0E-87 T 22-04-2016 IPR014047 Chromate transporter, long chain RPIC_RS02600 f04b073ab5754526b5ea38faf31bccb4 547 Pfam PF02470 MlaD protein 49 139 3.1E-10 T 22-04-2016 IPR003399 Mce/MlaD RPIC_RS02600 f04b073ab5754526b5ea38faf31bccb4 547 Pfam PF02470 MlaD protein 164 224 1.8E-9 T 22-04-2016 IPR003399 Mce/MlaD RPIC_RS02600 f04b073ab5754526b5ea38faf31bccb4 547 Pfam PF02470 MlaD protein 292 396 1.9E-17 T 22-04-2016 IPR003399 Mce/MlaD RPIC_RS02600 f04b073ab5754526b5ea38faf31bccb4 547 PANTHER PTHR30462:SF0 1 324 1.0E-83 T 22-04-2016 RPIC_RS02600 f04b073ab5754526b5ea38faf31bccb4 547 PANTHER PTHR30462 1 324 1.0E-83 T 22-04-2016 RPIC_RS07175 9786101590ad8deb47dc4298071f0f77 507 PANTHER PTHR11785 11 486 5.6E-190 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS07175 9786101590ad8deb47dc4298071f0f77 507 PANTHER PTHR11785:SF204 11 486 5.6E-190 T 22-04-2016 RPIC_RS07175 9786101590ad8deb47dc4298071f0f77 507 ProSitePatterns PS00218 Amino acid permeases signature. 49 80 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RPIC_RS07175 9786101590ad8deb47dc4298071f0f77 507 PIRSF PIRSF006060 4 494 3.4E-82 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS07175 9786101590ad8deb47dc4298071f0f77 507 Pfam PF00324 Amino acid permease 24 480 2.1E-124 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RPIC_RS01005 e949a2a5b573e63e99e6e1e5e26ae538 249 SUPERFAMILY SSF69572 2 246 1.19E-84 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS01005 e949a2a5b573e63e99e6e1e5e26ae538 249 Pfam PF00899 ThiF family 9 242 1.3E-58 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS01005 e949a2a5b573e63e99e6e1e5e26ae538 249 PANTHER PTHR10953:SF158 1 246 9.0E-90 T 22-04-2016 RPIC_RS01005 e949a2a5b573e63e99e6e1e5e26ae538 249 Gene3D G3DSA:3.40.50.720 3 246 6.0E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01005 e949a2a5b573e63e99e6e1e5e26ae538 249 PANTHER PTHR10953 1 246 9.0E-90 T 22-04-2016 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 PANTHER PTHR11070 20 90 3.4E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 PANTHER PTHR11070 795 858 3.4E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 PANTHER PTHR11070 333 539 3.4E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 PANTHER PTHR11070 890 918 3.4E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 PANTHER PTHR11070 563 762 3.4E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 PANTHER PTHR11070 121 211 3.4E-82 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 472 1.5E-46 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Gene3D G3DSA:3.40.50.300 20 77 8.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Gene3D G3DSA:3.40.50.300 368 473 8.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Gene3D G3DSA:3.40.50.300 129 189 8.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 SUPERFAMILY SSF52540 568 791 2.28E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 SUPERFAMILY SSF52540 891 917 2.28E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 SUPERFAMILY SSF52540 21 81 2.28E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 SUPERFAMILY SSF52540 818 842 2.28E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 SUPERFAMILY SSF52540 121 201 2.28E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 SUPERFAMILY SSF52540 358 513 2.28E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Gene3D G3DSA:1.10.486.10 638 779 5.3E-10 T 22-04-2016 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Pfam PF13361 UvrD-like helicase C-terminal domain 817 913 4.0E-9 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1008 1136 1.2E-4 T 22-04-2016 RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Gene3D G3DSA:3.40.50.300 810 928 2.0E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05135 cabe98a63ba7610f6f3d07f62473bbca 1173 Gene3D G3DSA:3.40.50.300 491 625 2.0E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 SMART SM00883 2 94 1.8E-56 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 Gene3D G3DSA:2.30.33.40 1 94 1.2E-38 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 SUPERFAMILY SSF50129 1 94 1.03E-34 T 22-04-2016 IPR011032 GroES-like RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.696 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 PRINTS PR00297 10kDa chaperonin signature 81 94 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 PANTHER PTHR10772 1 94 2.3E-42 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS02810 d5cdbd940f0bf168c325e4372ba4794f 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 2.5E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 17 365 36.801 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 SUPERFAMILY SSF55681 5 311 8.6E-57 T 22-04-2016 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 PANTHER PTHR11476 13 314 9.8E-50 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 Gene3D G3DSA:3.30.930.10 18 314 5.0E-66 T 22-04-2016 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 PANTHER PTHR11476:SF5 13 314 9.8E-50 T 22-04-2016 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 Pfam PF13393 Histidyl-tRNA synthetase 11 314 2.4E-121 T 22-04-2016 RPIC_RS05310 592ef5c9032d85398f64a712464764d2 387 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 13 315 6.4E-86 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 SUPERFAMILY SSF52777 186 415 6.23E-88 T 22-04-2016 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 Gene3D G3DSA:4.10.320.10 114 159 3.5E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 SUPERFAMILY SSF51230 2 97 1.7E-27 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 415 3.5E-166 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 186 414 5.5E-80 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 Pfam PF02817 e3 binding domain 115 148 2.0E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 Gene3D G3DSA:3.30.559.10 183 414 1.3E-91 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 PANTHER PTHR23151:SF47 3 416 1.2E-211 T 22-04-2016 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 PANTHER PTHR23151 3 416 1.2E-211 T 22-04-2016 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 SUPERFAMILY SSF47005 113 152 1.06E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 Gene3D G3DSA:2.40.50.100 2 97 6.9E-30 T 22-04-2016 RPIC_RS05460 96f3e3e4ddbe4bbcacffd41cee4a1bcb 416 Pfam PF00364 Biotin-requiring enzyme 5 77 1.0E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS10335 28902c8cf7ac2b08968b3ea90dcd70b7 179 PANTHER PTHR38596 9 176 5.6E-71 T 22-04-2016 RPIC_RS10335 28902c8cf7ac2b08968b3ea90dcd70b7 179 PANTHER PTHR38596:SF1 9 176 5.6E-71 T 22-04-2016 RPIC_RS10335 28902c8cf7ac2b08968b3ea90dcd70b7 179 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 172 91.201 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 RPIC_RS10335 28902c8cf7ac2b08968b3ea90dcd70b7 179 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 11 168 4.0E-60 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria RPIC_RS10335 28902c8cf7ac2b08968b3ea90dcd70b7 179 Pfam PF03350 Uncharacterized protein family, UPF0114 15 131 4.5E-37 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 Pfam PF13932 GidA associated domain 403 625 3.9E-73 T 22-04-2016 IPR026904 GidA associated domain 3 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 22-04-2016 IPR020595 MnmG-related, conserved site RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 Pfam PF01134 Glucose inhibited division protein A 8 400 1.0E-165 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 SMART SM01228 556 627 3.7E-45 T 22-04-2016 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.623 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 Gene3D G3DSA:3.50.50.60 6 233 1.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 PANTHER PTHR11806 1 631 0.0 T 22-04-2016 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 PANTHER PTHR11806:SF0 1 631 0.0 T 22-04-2016 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 SUPERFAMILY SSF51905 97 262 6.04E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 SUPERFAMILY SSF51905 7 66 6.04E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 631 5.7E-274 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 RPIC_RS17460 77fb70f98917981aea97e4eeb128234f 649 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 22-04-2016 IPR020595 MnmG-related, conserved site RPIC_RS07200 c85642c9795b3c5ba096994ff950bd5f 418 SUPERFAMILY SSF53822 30 384 4.0E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS07200 c85642c9795b3c5ba096994ff950bd5f 418 PANTHER PTHR30483 7 417 9.0E-47 T 22-04-2016 RPIC_RS07200 c85642c9795b3c5ba096994ff950bd5f 418 Gene3D G3DSA:3.40.50.2300 30 241 4.9E-38 T 22-04-2016 RPIC_RS07200 c85642c9795b3c5ba096994ff950bd5f 418 Pfam PF13458 Periplasmic binding protein 31 380 8.3E-70 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 Gene3D G3DSA:3.40.50.300 272 476 1.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 Gene3D G3DSA:2.40.50.140 72 154 1.1E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 Gene3D G3DSA:3.40.50.300 477 659 4.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 SMART SM00490 528 611 4.4E-18 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 PANTHER PTHR24031:SF249 275 299 1.0E-122 T 22-04-2016 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 PANTHER PTHR24031:SF249 316 625 1.0E-122 T 22-04-2016 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 PANTHER PTHR24031:SF249 648 700 1.0E-122 T 22-04-2016 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 SMART SM00487 282 482 5.1E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 41 684 6.0E-210 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 Pfam PF17191 RecG wedge domain 32 183 2.1E-9 T 22-04-2016 IPR033454 RecG, wedge domain RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 SUPERFAMILY SSF52540 224 476 2.27E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 SUPERFAMILY SSF52540 475 677 4.99E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 Pfam PF00270 DEAD/DEAH box helicase 290 457 4.8E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 SUPERFAMILY SSF50249 31 186 8.22E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 Pfam PF00271 Helicase conserved C-terminal domain 495 610 4.1E-19 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 PANTHER PTHR24031 275 299 1.0E-122 T 22-04-2016 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 PANTHER PTHR24031 316 625 1.0E-122 T 22-04-2016 RPIC_RS14550 45fc0db6633d4193d7db49123693feb7 715 PANTHER PTHR24031 648 700 1.0E-122 T 22-04-2016 RPIC_RS10450 92402100fada3417551b2397cdbec1ef 169 TIGRFAM TIGR01841 phasin: phasin family protein 25 111 1.2E-25 T 22-04-2016 IPR010127 Phasin, subfamily 1 RPIC_RS10450 92402100fada3417551b2397cdbec1ef 169 Pfam PF09361 Phasin protein 5 102 2.0E-18 T 22-04-2016 IPR018968 Phasin RPIC_RS02485 8a6ebce024bae6588a9f0d2d13828625 262 Gene3D G3DSA:3.90.1140.10 76 125 2.3E-4 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC_RS02485 8a6ebce024bae6588a9f0d2d13828625 262 Gene3D G3DSA:3.90.1140.10 158 233 2.3E-4 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC_RS02485 8a6ebce024bae6588a9f0d2d13828625 262 PIRSF PIRSF033328 16 256 1.2E-42 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RPIC_RS02485 8a6ebce024bae6588a9f0d2d13828625 262 Pfam PF06299 Protein of unknown function (DUF1045) 80 239 6.4E-51 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 PANTHER PTHR24220 39 329 6.1E-142 T 22-04-2016 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 PANTHER PTHR24220 7 17 6.1E-142 T 22-04-2016 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 PANTHER PTHR24220:SF336 39 329 6.1E-142 T 22-04-2016 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 PANTHER PTHR24220:SF336 7 17 6.1E-142 T 22-04-2016 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 329 6.0E-28 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 Gene3D G3DSA:3.40.50.300 4 266 8.7E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 Pfam PF00005 ABC transporter 43 193 7.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 SMART SM00382 51 243 3.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 SUPERFAMILY SSF52540 51 328 6.74E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 309 4.1E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS10260 d80c2e891f036d2966c74e3d8a1f3fc2 333 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 PIRSF PIRSF000521 19 394 1.5E-42 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 SUPERFAMILY SSF53383 7 391 2.18E-111 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 PANTHER PTHR11986:SF88 10 391 2.9E-169 T 22-04-2016 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 Pfam PF00202 Aminotransferase class-III 19 389 4.4E-99 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 PANTHER PTHR11986 10 391 2.9E-169 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 Gene3D G3DSA:3.90.1150.10 299 393 1.8E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 Gene3D G3DSA:3.90.1150.10 11 54 1.8E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 40.419 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RPIC_RS13315 6fc9d3a850f7d121a14ced9dc65a30df 395 Gene3D G3DSA:3.40.640.10 57 293 5.8E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS11715 8a86f99e580f8704efe1d214115212fa 306 PANTHER PTHR32196 8 304 1.2E-102 T 22-04-2016 RPIC_RS11715 8a86f99e580f8704efe1d214115212fa 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 279 1.3E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS11715 8a86f99e580f8704efe1d214115212fa 306 PANTHER PTHR32196:SF33 8 304 1.2E-102 T 22-04-2016 RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 Pfam PF10996 Beta-Casp domain 248 367 1.3E-25 T 22-04-2016 IPR022712 Beta-Casp domain RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 PANTHER PTHR11203 1 452 1.4E-108 T 22-04-2016 RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 Gene3D G3DSA:3.60.15.10 1 92 3.8E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 Gene3D G3DSA:3.60.15.10 127 258 3.8E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 381 444 4.1E-12 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 SUPERFAMILY SSF56281 1 452 2.23E-130 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 Pfam PF00753 Metallo-beta-lactamase superfamily 16 76 2.8E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 SMART SM00849 13 233 1.5E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 PANTHER PTHR11203:SF11 1 452 1.4E-108 T 22-04-2016 RPIC_RS08390 5a06c1378eaf7d0690651f171a244653 454 SMART SM01027 248 367 2.4E-49 T 22-04-2016 IPR022712 Beta-Casp domain RPIC_RS15005 8c9a996984101933d0422ffe4bbd3be7 402 PANTHER PTHR23409 53 397 6.0E-147 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RPIC_RS15005 8c9a996984101933d0422ffe4bbd3be7 402 Pfam PF00268 Ribonucleotide reductase, small chain 82 369 1.5E-81 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RPIC_RS15005 8c9a996984101933d0422ffe4bbd3be7 402 SUPERFAMILY SSF47240 66 373 2.79E-96 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS15005 8c9a996984101933d0422ffe4bbd3be7 402 PANTHER PTHR23409:SF18 53 397 6.0E-147 T 22-04-2016 RPIC_RS15005 8c9a996984101933d0422ffe4bbd3be7 402 PIRSF PIRSF000355 54 402 1.0E-131 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 RPIC_RS15005 8c9a996984101933d0422ffe4bbd3be7 402 Gene3D G3DSA:1.10.620.20 64 377 6.1E-111 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 SUPERFAMILY SSF48403 36 216 2.64E-40 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 PRINTS PR01415 Ankyrin repeat signature 130 145 1.4E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 PRINTS PR01415 Ankyrin repeat signature 178 192 1.4E-8 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 PANTHER PTHR24198 36 218 3.0E-37 T 22-04-2016 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 Gene3D G3DSA:1.25.40.20 39 230 4.3E-43 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 Pfam PF12796 Ankyrin repeats (3 copies) 114 193 1.7E-18 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 SMART SM00248 162 191 4.6E-5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 SMART SM00248 98 128 5.5 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 SMART SM00248 64 92 360.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS07035 d1f6eefc060ea67c00d7b3655f89c768 284 SMART SM00248 129 158 6.2E-6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 20 34 1.1E-14 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 52 66 1.1E-14 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 86 96 1.1E-14 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 PANTHER PTHR30050:SF2 1 96 7.3E-39 T 22-04-2016 RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 PANTHER PTHR30050 1 96 7.3E-39 T 22-04-2016 RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 Gene3D G3DSA:3.40.50.300 1 96 4.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 Pfam PF00308 Bacterial dnaA protein 1 96 5.6E-32 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA RPIC_RS24455 07295f062ef667cba169590c2eeb5add 96 SUPERFAMILY SSF52540 1 95 2.58E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 63 368 1.1E-118 T 22-04-2016 IPR011757 Lytic transglycosylase MltB RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 Gene3D G3DSA:1.10.530.10 248 372 1.5E-48 T 22-04-2016 RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 Gene3D G3DSA:1.10.530.10 105 160 1.5E-48 T 22-04-2016 RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 Pfam PF13406 Transglycosylase SLT domain 60 366 2.7E-83 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 PANTHER PTHR30163 56 374 2.0E-96 T 22-04-2016 IPR011757 Lytic transglycosylase MltB RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 SUPERFAMILY SSF53955 56 371 7.87E-76 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS03860 53c9c7bac3f9e34dfa2b74b2f60324bd 374 PANTHER PTHR30163:SF0 56 374 2.0E-96 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PANTHER PTHR10617 1 295 1.1E-107 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PANTHER PTHR10617 340 404 1.1E-107 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 Pfam PF03486 HI0933-like protein 4 402 5.0E-145 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.7E-5 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 2.7E-5 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.7E-5 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 Gene3D G3DSA:2.40.30.10 188 282 5.9E-28 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 Gene3D G3DSA:1.10.8.260 284 331 1.6E-6 T 22-04-2016 IPR023166 HI0933 insert-like domain RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 SUPERFAMILY SSF51905 347 404 1.36E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 SUPERFAMILY SSF51905 1 188 1.36E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 401 3.7E-121 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PANTHER PTHR10617:SF103 1 295 1.1E-107 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PANTHER PTHR10617:SF103 340 404 1.1E-107 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 6.9E-6 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.9E-6 T 22-04-2016 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 Gene3D G3DSA:3.50.50.60 349 404 3.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 Gene3D G3DSA:3.50.50.60 1 186 3.5E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS11945 7ee8b338d2c88cecf56b70da1eaeb5e3 407 SUPERFAMILY SSF160996 189 350 1.01E-38 T 22-04-2016 RPIC_RS13455 58861454c6017bcae9574930256643e7 348 Gene3D G3DSA:3.20.20.30 7 331 5.5E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS13455 58861454c6017bcae9574930256643e7 348 PANTHER PTHR30137:SF7 1 348 6.9E-110 T 22-04-2016 RPIC_RS13455 58861454c6017bcae9574930256643e7 348 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 332 1.6E-116 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 RPIC_RS13455 58861454c6017bcae9574930256643e7 348 PANTHER PTHR30137 1 348 6.9E-110 T 22-04-2016 RPIC_RS13455 58861454c6017bcae9574930256643e7 348 Pfam PF00296 Luciferase-like monooxygenase 21 304 1.5E-29 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS13455 58861454c6017bcae9574930256643e7 348 SUPERFAMILY SSF51679 6 331 4.48E-71 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS06665 90899d3fa4da90fec63d0c47972c25c5 376 PANTHER PTHR21225 1 372 2.8E-219 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS06665 90899d3fa4da90fec63d0c47972c25c5 376 Pfam PF00793 DAHP synthetase I family 60 358 6.0E-99 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS06665 90899d3fa4da90fec63d0c47972c25c5 376 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 26 370 5.5E-155 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS06665 90899d3fa4da90fec63d0c47972c25c5 376 SUPERFAMILY SSF51569 28 369 1.6E-134 T 22-04-2016 RPIC_RS06665 90899d3fa4da90fec63d0c47972c25c5 376 PIRSF PIRSF001361 15 373 8.9E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS06665 90899d3fa4da90fec63d0c47972c25c5 376 Gene3D G3DSA:3.20.20.70 29 371 7.2E-155 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 PANTHER PTHR26402:SF524 5 127 6.9E-41 T 22-04-2016 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 SUPERFAMILY SSF52172 4 133 1.85E-26 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 Gene3D G3DSA:3.40.50.2300 3 132 2.6E-27 T 22-04-2016 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 SMART SM00850 181 277 6.2E-23 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 Gene3D G3DSA:2.40.50.40 173 241 6.6E-17 T 22-04-2016 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 Pfam PF04397 LytTr DNA-binding domain 183 277 3.9E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 PANTHER PTHR26402 5 127 6.9E-41 T 22-04-2016 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 Pfam PF00072 Response regulator receiver domain 8 121 1.5E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS06095 7d5999ce0238b8a8d0fda3dd24a67064 277 SMART SM00448 5 121 7.6E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 SUPERFAMILY SSF82544 8 431 4.45E-135 T 22-04-2016 RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 Gene3D G3DSA:3.40.50.10180 12 250 2.4E-92 T 22-04-2016 RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 Pfam PF13660 Domain of unknown function (DUF4147) 13 234 3.7E-72 T 22-04-2016 IPR025286 MOFRL-associated domain RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 PANTHER PTHR12227 1 431 1.4E-117 T 22-04-2016 RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 PANTHER PTHR12227:SF0 1 431 1.4E-117 T 22-04-2016 RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 Pfam PF05161 MOFRL family 317 425 1.5E-33 T 22-04-2016 IPR007835 MOFRL domain RPIC_RS01775 43e1f04f0608675629b7a95c880efa07 432 Gene3D G3DSA:3.40.1480.10 251 431 3.5E-65 T 22-04-2016 IPR007835 MOFRL domain RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 294 3.6E-123 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 PANTHER PTHR30579 1 295 7.8E-111 T 22-04-2016 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 Pfam PF03466 LysR substrate binding domain 95 290 6.9E-19 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 Gene3D G3DSA:1.10.10.10 3 80 6.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 PANTHER PTHR30579:SF2 1 295 7.8E-111 T 22-04-2016 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 Gene3D G3DSA:3.40.190.10 93 199 1.9E-42 T 22-04-2016 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 SUPERFAMILY SSF53850 95 290 7.24E-24 T 22-04-2016 RPIC_RS09900 a500e85c9acadb1d3be32e0354c1201a 298 SUPERFAMILY SSF46785 2 110 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 SUPERFAMILY SSF52317 1 186 2.2E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PANTHER PTHR11922 1 188 2.7E-97 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.4E-6 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.4E-6 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 Gene3D G3DSA:3.40.50.880 2 186 1.2E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.0E-34 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.0E-34 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.0E-34 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.0E-34 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.0E-34 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.0E-34 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PANTHER PTHR11922:SF7 1 188 2.7E-97 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.5E-13 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.5E-13 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.5E-13 T 22-04-2016 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 3.5E-82 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS15425 f1054973ab624598b232cb395104c9b9 189 Pfam PF00117 Glutamine amidotransferase class-I 4 186 4.9E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 SUPERFAMILY SSF46689 8 77 9.23E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 8.91E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 8.91E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 Pfam PF13972 Bacterial transcriptional repressor 66 213 9.8E-43 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 PANTHER PTHR30055:SF30 1 172 4.0E-39 T 22-04-2016 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 1.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 PANTHER PTHR30055 1 172 4.0E-39 T 22-04-2016 RPIC_RS11005 ee7e81ab94ff326faf654e9114fca8d2 236 Gene3D G3DSA:1.10.357.10 10 188 2.8E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS09815 3864b548689087528b46973fab909ac0 197 Gene3D G3DSA:3.40.50.360 1 196 5.9E-65 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS09815 3864b548689087528b46973fab909ac0 197 PANTHER PTHR30546 1 197 3.3E-66 T 22-04-2016 RPIC_RS09815 3864b548689087528b46973fab909ac0 197 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RPIC_RS09815 3864b548689087528b46973fab909ac0 197 Pfam PF03358 NADPH-dependent FMN reductase 11 140 1.8E-8 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIC_RS09815 3864b548689087528b46973fab909ac0 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 195 1.4E-41 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 RPIC_RS09815 3864b548689087528b46973fab909ac0 197 SUPERFAMILY SSF52218 1 195 2.36E-57 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 Gene3D G3DSA:3.30.390.50 179 270 2.7E-14 T 22-04-2016 RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 PANTHER PTHR11908:SF68 1 270 3.6E-56 T 22-04-2016 RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 174 3.5E-41 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 Gene3D G3DSA:3.30.43.10 1 54 8.5E-21 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 SMART SM01092 181 270 1.1E-11 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 270 4.7E-5 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 PANTHER PTHR11908 1 270 3.6E-56 T 22-04-2016 RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 SUPERFAMILY SSF56176 1 174 1.42E-46 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 SUPERFAMILY SSF55447 179 270 4.71E-16 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS10110 5af7712429e214f9577339181e9dc4e6 271 Gene3D G3DSA:3.30.465.10 59 174 2.8E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 1.0E-47 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 93 21.343 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 Gene3D G3DSA:2.40.240.10 2 93 2.2E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 31.753 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 172 7.2E-45 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 Pfam PF01386 Ribosomal L25p family 5 90 7.4E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 SUPERFAMILY SSF50715 2 192 4.36E-56 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 186 2.3E-31 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 PANTHER PTHR33284 5 204 5.1E-60 T 22-04-2016 RPIC_RS01210 c2359da725d07b18d7af173e43413a52 208 Gene3D G3DSA:2.170.120.20 96 192 1.1E-32 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain RPIC_RS00415 f40d296a82e8b32d852e36af9b64e868 118 PANTHER PTHR34310 3 117 1.2E-47 T 22-04-2016 RPIC_RS00415 f40d296a82e8b32d852e36af9b64e868 118 Pfam PF04248 Domain of unknown function (DUF427) 19 110 1.3E-33 T 22-04-2016 IPR007361 Domain of unknown function DUF427 RPIC_RS00415 f40d296a82e8b32d852e36af9b64e868 118 PANTHER PTHR34310:SF3 3 117 1.2E-47 T 22-04-2016 RPIC_RS01810 ef17e2824eb1dd76e29f8fcc12ad0436 134 PANTHER PTHR35024 6 112 2.7E-24 T 22-04-2016 RPIC_RS01810 ef17e2824eb1dd76e29f8fcc12ad0436 134 Pfam PF04519 Polymer-forming cytoskeletal 13 113 7.5E-27 T 22-04-2016 IPR007607 Protein of unknown function DUF583 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 PANTHER PTHR30258:SF1 2 575 1.1E-207 T 22-04-2016 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 Gene3D G3DSA:3.30.450.90 162 297 6.6E-47 T 22-04-2016 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 36 134 4.7E-10 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 SUPERFAMILY SSF160246 2 134 1.57E-22 T 22-04-2016 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 3 574 5.1E-231 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 SUPERFAMILY SSF52540 167 571 1.11E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 392 406 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 Gene3D G3DSA:3.40.50.300 303 573 1.9E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 SMART SM00382 325 446 0.0079 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 PANTHER PTHR30258 2 575 1.1E-207 T 22-04-2016 RPIC_RS15130 bcaf9eceb34848d2977ab602e4b66d94 575 Pfam PF00437 Type II/IV secretion system protein 187 464 1.3E-81 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 Gene3D G3DSA:3.30.70.360 180 296 3.1E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 Gene3D G3DSA:3.40.630.10 3 177 9.3E-106 T 22-04-2016 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 Gene3D G3DSA:3.40.630.10 297 394 9.3E-106 T 22-04-2016 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 380 4.4E-113 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 SUPERFAMILY SSF55031 182 295 2.22E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 PANTHER PTHR11014:SF63 1 396 2.2E-161 T 22-04-2016 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 SUPERFAMILY SSF53187 2 196 4.3E-94 T 22-04-2016 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 SUPERFAMILY SSF53187 297 394 4.3E-94 T 22-04-2016 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 Pfam PF01546 Peptidase family M20/M25/M40 72 390 7.8E-37 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 Pfam PF07687 Peptidase dimerisation domain 184 281 6.5E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 PIRSF PIRSF005962 1 396 4.3E-134 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS15345 318ca8ce1fd0455c569344d6eface1d8 396 PANTHER PTHR11014 1 396 2.2E-161 T 22-04-2016 RPIC_RS09600 2217c12b208163b7420c87f2f6e153a5 268 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 6 254 1.7E-123 T 22-04-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 RPIC_RS09600 2217c12b208163b7420c87f2f6e153a5 268 PANTHER PTHR30502:SF5 5 266 3.7E-98 T 22-04-2016 RPIC_RS09600 2217c12b208163b7420c87f2f6e153a5 268 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 243 5.2E-58 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RPIC_RS09600 2217c12b208163b7420c87f2f6e153a5 268 PANTHER PTHR30502 5 266 3.7E-98 T 22-04-2016 RPIC_RS09600 2217c12b208163b7420c87f2f6e153a5 268 Gene3D G3DSA:3.20.20.60 4 254 9.0E-82 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS09600 2217c12b208163b7420c87f2f6e153a5 268 SUPERFAMILY SSF51621 2 254 2.41E-82 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 PANTHER PTHR32552:SF10 69 702 1.3E-69 T 22-04-2016 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 699 1.6E-97 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 Gene3D G3DSA:2.170.130.10 37 179 9.8E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 Pfam PF00593 TonB dependent receptor 472 700 4.4E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 Gene3D G3DSA:2.40.170.20 184 700 1.2E-104 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 PANTHER PTHR32552 69 702 1.3E-69 T 22-04-2016 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 169 5.1E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS03665 1b7fff51d479a10bd4021ced90079053 702 SUPERFAMILY SSF56935 33 700 5.83E-108 T 22-04-2016 RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 SUPERFAMILY SSF46785 1 84 3.93E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 Gene3D G3DSA:3.40.190.10 201 261 3.0E-6 T 22-04-2016 RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 Pfam PF03466 LysR substrate binding domain 91 296 7.2E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 PANTHER PTHR30126:SF2 1 298 3.4E-56 T 22-04-2016 RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 Gene3D G3DSA:3.40.190.10 90 200 1.9E-13 T 22-04-2016 RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 Gene3D G3DSA:1.10.10.10 1 84 2.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 PANTHER PTHR30126 1 298 3.4E-56 T 22-04-2016 RPIC_RS02100 04a98f4282e66975d9ae42fe22a776fb 307 SUPERFAMILY SSF53850 91 299 5.25E-23 T 22-04-2016 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 Pfam PF08220 DeoR-like helix-turn-helix domain 7 58 1.7E-11 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 SUPERFAMILY SSF46785 3 63 5.45E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 PANTHER PTHR30363 1 254 2.2E-62 T 22-04-2016 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 SMART SM00420 6 57 1.7E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 SMART SM01134 72 231 1.7E-58 T 22-04-2016 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 Gene3D G3DSA:3.40.50.1360 74 221 1.1E-12 T 22-04-2016 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 4.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 4.3E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 SUPERFAMILY SSF100950 75 232 3.62E-30 T 22-04-2016 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 39 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 PANTHER PTHR30363:SF1 1 254 2.2E-62 T 22-04-2016 RPIC_RS02735 cadfa56b24d9ad1b5fb7a46f21dc7074 254 Pfam PF00455 DeoR C terminal sensor domain 75 230 2.2E-42 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain RPIC_RS05905 b97e2fca305e264b06c243d00f8ec900 249 Gene3D G3DSA:3.90.1720.10 59 181 8.4E-42 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS05905 b97e2fca305e264b06c243d00f8ec900 249 SUPERFAMILY SSF54001 56 179 9.81E-40 T 22-04-2016 RPIC_RS05905 b97e2fca305e264b06c243d00f8ec900 249 PANTHER PTHR21666 65 186 2.9E-36 T 22-04-2016 RPIC_RS05905 b97e2fca305e264b06c243d00f8ec900 249 Pfam PF00877 NlpC/P60 family 70 177 4.9E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 2.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 SUPERFAMILY SSF53850 90 285 6.62E-29 T 22-04-2016 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 Pfam PF03466 LysR substrate binding domain 90 281 9.7E-30 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 PANTHER PTHR30579:SF0 1 295 4.1E-64 T 22-04-2016 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 Gene3D G3DSA:3.40.190.10 87 190 1.1E-21 T 22-04-2016 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 Gene3D G3DSA:1.10.10.10 4 84 6.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 SUPERFAMILY SSF46785 5 112 7.61E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 Gene3D G3DSA:3.40.190.10 191 232 2.3E-6 T 22-04-2016 RPIC_RS18025 fdc2c72fa3be64a03a3876ab71d42113 295 PANTHER PTHR30579 1 295 4.1E-64 T 22-04-2016 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 PANTHER PTHR23408:SF1 480 703 4.9E-206 T 22-04-2016 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 PANTHER PTHR23408:SF1 726 1095 4.9E-206 T 22-04-2016 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 SUPERFAMILY SSF51703 512 1091 7.59E-152 T 22-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 Gene3D G3DSA:3.40.50.280 22 154 4.9E-39 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 PANTHER PTHR23408 480 703 4.9E-206 T 22-04-2016 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 PANTHER PTHR23408 726 1095 4.9E-206 T 22-04-2016 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 Pfam PF02310 B12 binding domain 27 129 1.7E-11 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 Pfam PF01642 Methylmalonyl-CoA mutase 558 1089 9.3E-147 T 22-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 SUPERFAMILY SSF52242 22 156 5.36E-42 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 24 137 2.5E-17 T 22-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 Gene3D G3DSA:3.20.20.240 551 1091 1.0E-195 T 22-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 SUPERFAMILY SSF52540 138 416 7.34E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 Gene3D G3DSA:3.40.50.300 207 412 4.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 Pfam PF03308 ArgK protein 178 411 1.2E-43 T 22-04-2016 RPIC_RS00430 85b50def099a3e846aeb2031b8a8d79a 1095 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 545 1094 8.0E-115 T 22-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 SMART SM00382 420 593 1.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 PANTHER PTHR11384 29 587 4.2E-199 T 22-04-2016 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 Pfam PF06472 ABC transporter transmembrane region 2 29 316 4.3E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 Gene3D G3DSA:3.40.50.300 406 581 8.8E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 ProSitePatterns PS00211 ABC transporters family signature. 518 532 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 SUPERFAMILY SSF90123 33 363 8.89E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 SUPERFAMILY SSF52540 391 590 4.43E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 PANTHER PTHR11384:SF3 29 587 4.2E-199 T 22-04-2016 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 Pfam PF00005 ABC transporter 414 546 2.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS01620 562a517cbc47fdaa6b03f97360c53170 614 Gene3D G3DSA:1.20.1560.10 33 363 8.6E-17 T 22-04-2016 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 Gene3D G3DSA:3.40.190.10 96 196 1.9E-21 T 22-04-2016 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 SUPERFAMILY SSF53850 93 290 8.87E-38 T 22-04-2016 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 PANTHER PTHR30537:SF3 1 295 5.5E-82 T 22-04-2016 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 SUPERFAMILY SSF46785 6 116 2.07E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 Gene3D G3DSA:1.10.10.10 9 89 1.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.6E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 PANTHER PTHR30537 1 295 5.5E-82 T 22-04-2016 RPIC_RS17490 55e078e3b550cf616cd98009c2c3308f 298 Pfam PF03466 LysR substrate binding domain 92 289 2.3E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS05030 baa6aae5c5c8d96757cb4a3c658ae6a4 374 SUPERFAMILY SSF161098 155 342 2.22E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05030 baa6aae5c5c8d96757cb4a3c658ae6a4 374 PANTHER PTHR30325 21 364 4.4E-155 T 22-04-2016 RPIC_RS05030 baa6aae5c5c8d96757cb4a3c658ae6a4 374 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 62 5.4E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RPIC_RS05030 baa6aae5c5c8d96757cb4a3c658ae6a4 374 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 178 359 4.5E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05030 baa6aae5c5c8d96757cb4a3c658ae6a4 374 Gene3D G3DSA:1.10.3720.10 151 356 3.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 SUPERFAMILY SSF53335 7 487 4.81E-122 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 275 281 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 PANTHER PTHR30408:SF4 74 453 2.0E-89 T 22-04-2016 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 Pfam PF12161 HsdM N-terminal domain 9 136 1.1E-21 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 PANTHER PTHR30408 74 453 2.0E-89 T 22-04-2016 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 187 3.0E-16 T 22-04-2016 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 209 3.0E-16 T 22-04-2016 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 272 284 3.0E-16 T 22-04-2016 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 308 332 3.0E-16 T 22-04-2016 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 Pfam PF02384 N-6 DNA Methylase 148 452 5.8E-86 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RPIC_RS15670 5ad793276b767c42b42b5982fe4476e7 503 Gene3D G3DSA:3.40.50.150 173 394 2.0E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15290 d1c12cc8db05d43a1fb61f791ccb6320 144 PANTHER PTHR11075 12 138 1.3E-38 T 22-04-2016 RPIC_RS15290 d1c12cc8db05d43a1fb61f791ccb6320 144 Gene3D G3DSA:3.30.160.200 7 110 5.1E-31 T 22-04-2016 RPIC_RS15290 d1c12cc8db05d43a1fb61f791ccb6320 144 Pfam PF00472 RF-1 domain 10 137 1.8E-23 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC_RS15290 d1c12cc8db05d43a1fb61f791ccb6320 144 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC_RS15290 d1c12cc8db05d43a1fb61f791ccb6320 144 SUPERFAMILY SSF110916 14 102 2.88E-10 T 22-04-2016 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 SUPERFAMILY SSF51717 1 257 1.27E-93 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 Gene3D G3DSA:3.20.20.20 1 257 4.6E-104 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 PANTHER PTHR20941:SF1 1 260 7.6E-108 T 22-04-2016 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 PANTHER PTHR20941 1 260 7.6E-108 T 22-04-2016 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 Pfam PF00809 Pterin binding enzyme 1 240 2.3E-81 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC_RS09985 533cd572b464c43b98c5d7a77a2ca3b4 265 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 253 2.5E-93 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 SUPERFAMILY SSF47203 227 381 6.6E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 Gene3D G3DSA:1.20.140.10 219 383 1.7E-55 T 22-04-2016 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 PANTHER PTHR10909:SF227 3 384 5.2E-250 T 22-04-2016 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 Gene3D G3DSA:2.40.110.10 121 218 4.8E-41 T 22-04-2016 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 Gene3D G3DSA:1.10.540.10 2 118 4.1E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 PANTHER PTHR10909 3 384 5.2E-250 T 22-04-2016 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 SUPERFAMILY SSF56645 2 241 6.41E-81 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 5.2E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.9E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00510 84c33d193518303824e2885c11c81af5 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.4E-26 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 PANTHER PTHR22835 30 337 5.2E-21 T 22-04-2016 RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 Gene3D G3DSA:3.40.50.1110 33 343 7.8E-64 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 PANTHER PTHR22835:SF222 30 337 5.2E-21 T 22-04-2016 RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 41 334 2.9E-10 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 SUPERFAMILY SSF52266 312 340 5.83E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC_RS02445 5784bd56bc79b25d51ddba40876696e5 347 SUPERFAMILY SSF52266 38 270 5.83E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Gene3D G3DSA:2.70.150.10 253 417 8.4E-30 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Pfam PF00122 E1-E2 ATPase 271 507 2.7E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PANTHER PTHR24093:SF317 213 823 1.7E-203 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Gene3D G3DSA:3.40.50.1000 489 530 3.0E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Gene3D G3DSA:3.40.50.1000 650 785 3.0E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PANTHER PTHR24093 213 823 1.7E-203 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 273 796 4.4E-72 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 518 524 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Gene3D G3DSA:3.30.70.100 98 144 3.6E-4 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 SUPERFAMILY SSF55008 84 148 7.55E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 250 821 1.2E-170 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 SUPERFAMILY SSF81653 303 416 3.01E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 SUPERFAMILY SSF81665 417 510 7.72E-18 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 SUPERFAMILY SSF81665 253 304 7.72E-18 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 SUPERFAMILY SSF56784 575 818 2.97E-47 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 SUPERFAMILY SSF56784 515 534 2.97E-47 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Gene3D G3DSA:3.40.1110.10 531 649 2.2E-18 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 655 7.7E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 743 755 7.7E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 677 7.7E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 530 7.7E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 350 364 7.7E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 738 7.7E-25 T 22-04-2016 RPIC_RS08600 adfc29b7dd833552badf8b22d67a35b4 829 Pfam PF00702 haloacid dehalogenase-like hydrolase 513 732 1.1E-39 T 22-04-2016 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 PANTHER PTHR30001:SF1 1 842 0.0 T 22-04-2016 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 SMART SM00316 37 118 3.8E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 423 7.5E-160 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 Gene3D G3DSA:2.40.50.140 31 124 9.0E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 SUPERFAMILY SSF50249 39 124 8.46E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 Pfam PF10150 Ribonuclease E/G family 120 389 5.8E-94 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 Hamap MF_00970 Ribonuclease E [rne]. 1 991 34.818 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 PANTHER PTHR30001 1 842 0.0 T 22-04-2016 RPIC_RS04450 486790a474d5c7a761abc417bf857dda 1011 Pfam PF00575 S1 RNA binding domain 36 117 1.6E-10 T 22-04-2016 IPR003029 S1 domain GO:0003676 RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 SMART SM00895 98 224 5.3E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 SMART SM00345 15 74 1.0E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 SUPERFAMILY SSF46785 7 78 3.75E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 Gene3D G3DSA:1.10.10.10 9 77 9.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 Gene3D G3DSA:1.20.120.530 94 231 5.1E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 PANTHER PTHR11751 10 114 9.4E-27 T 22-04-2016 RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 SUPERFAMILY SSF48008 94 230 2.09E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18510 f31ae4a13a98153a586b1e5f2a52a275 238 Pfam PF07729 FCD domain 99 222 4.4E-24 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS06610 8f80903763472d730725bf802b00036b 182 PANTHER PTHR11079 17 164 1.5E-48 T 22-04-2016 RPIC_RS06610 8f80903763472d730725bf802b00036b 182 Pfam PF14437 MafB19-like deaminase 21 164 1.2E-30 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RPIC_RS06610 8f80903763472d730725bf802b00036b 182 SUPERFAMILY SSF53927 13 168 1.34E-56 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC_RS06610 8f80903763472d730725bf802b00036b 182 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 68 105 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIC_RS06610 8f80903763472d730725bf802b00036b 182 Gene3D G3DSA:3.40.140.10 12 162 9.9E-60 T 22-04-2016 RPIC_RS06610 8f80903763472d730725bf802b00036b 182 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 23 164 45.622 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 RPIC_RS12800 53416eb5eeed33c7bf812c24324a3d66 293 PANTHER PTHR33969 40 288 4.6E-73 T 22-04-2016 RPIC_RS12800 53416eb5eeed33c7bf812c24324a3d66 293 PANTHER PTHR33969:SF2 40 288 4.6E-73 T 22-04-2016 RPIC_RS12800 53416eb5eeed33c7bf812c24324a3d66 293 Pfam PF02616 Segregation and condensation protein ScpA 73 288 8.4E-32 T 22-04-2016 IPR003768 Segregation and condensation protein A RPIC_RS12800 53416eb5eeed33c7bf812c24324a3d66 293 Hamap MF_01805 Segregation and condensation protein A [scpA]. 56 290 21.046 T 22-04-2016 IPR003768 Segregation and condensation protein A RPIC_RS10605 6d25ce8ff2188f79817809142c9fc6cd 132 SUPERFAMILY SSF103378 54 121 1.96E-6 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 RPIC_RS10605 6d25ce8ff2188f79817809142c9fc6cd 132 Gene3D G3DSA:3.30.1330.120 55 117 8.8E-8 T 22-04-2016 RPIC_RS06415 d6edde250b105ca7e7083ddb9897e507 377 SUPERFAMILY SSF53756 2 338 3.73E-30 T 22-04-2016 RPIC_RS06415 d6edde250b105ca7e7083ddb9897e507 377 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 368 4.2E-96 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RPIC_RS06415 d6edde250b105ca7e7083ddb9897e507 377 PANTHER PTHR30372 1 374 1.0E-95 T 22-04-2016 RPIC_RS06415 d6edde250b105ca7e7083ddb9897e507 377 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 372 35.134 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RPIC_RS06415 d6edde250b105ca7e7083ddb9897e507 377 Gene3D G3DSA:3.40.50.2000 153 305 4.6E-9 T 22-04-2016 RPIC_RS06415 d6edde250b105ca7e7083ddb9897e507 377 Pfam PF02684 Lipid-A-disaccharide synthetase 1 362 6.0E-97 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 RPIC_RS00725 c34e397d99e77219d0d158e833adeede 130 Pfam PF00581 Rhodanese-like domain 15 105 2.2E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS00725 c34e397d99e77219d0d158e833adeede 130 SUPERFAMILY SSF52821 2 129 3.27E-23 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS00725 c34e397d99e77219d0d158e833adeede 130 Gene3D G3DSA:3.40.250.10 4 129 9.3E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS00725 c34e397d99e77219d0d158e833adeede 130 SMART SM00450 5 113 3.6E-12 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 SUPERFAMILY SSF50129 318 368 1.41E-12 T 22-04-2016 IPR011032 GroES-like RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 SUPERFAMILY SSF50129 1 184 1.26E-70 T 22-04-2016 IPR011032 GroES-like RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 PANTHER PTHR11695 128 368 5.9E-196 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 PANTHER PTHR11695 15 108 5.9E-196 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 PANTHER PTHR11695:SF560 128 368 5.9E-196 T 22-04-2016 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 PANTHER PTHR11695:SF560 15 108 5.9E-196 T 22-04-2016 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 SMART SM00829 12 366 5.7E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 128 3.6E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 Gene3D G3DSA:3.90.180.10 1 189 3.8E-64 T 22-04-2016 IPR011032 GroES-like RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 Gene3D G3DSA:3.40.50.720 190 306 1.4E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 1.7E-191 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 Pfam PF00107 Zinc-binding dehydrogenase 197 319 2.3E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS02625 3bd7eec3d3568bb750ce54c40995aa45 368 SUPERFAMILY SSF51735 160 333 4.9E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02885 8ccdb97665a4b9e7a590f0737bfe8900 449 SMART SM00382 158 346 0.0093 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS02885 8ccdb97665a4b9e7a590f0737bfe8900 449 Gene3D G3DSA:3.40.50.300 266 344 6.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02885 8ccdb97665a4b9e7a590f0737bfe8900 449 Gene3D G3DSA:3.40.50.300 172 223 6.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02885 8ccdb97665a4b9e7a590f0737bfe8900 449 Gene3D G3DSA:3.40.50.300 120 171 1.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02885 8ccdb97665a4b9e7a590f0737bfe8900 449 SUPERFAMILY SSF52540 139 425 5.32E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 PANTHER PTHR33221:SF1 2 159 1.1E-56 T 22-04-2016 RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 Pfam PF02082 Transcriptional regulator 1 83 2.5E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 137 7.0E-41 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 PANTHER PTHR33221 2 159 1.1E-56 T 22-04-2016 RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 Gene3D G3DSA:1.10.10.10 1 144 6.3E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 SUPERFAMILY SSF46785 2 140 1.26E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04340 f543e4a1617f5faec1ae923516a5535c 197 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 141 8.1E-65 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 RPIC_RS00215 98e5935d2af58a1eac44c4cb8f9fc557 314 Gene3D G3DSA:3.30.2010.10 90 165 1.8E-13 T 22-04-2016 RPIC_RS00215 98e5935d2af58a1eac44c4cb8f9fc557 314 PANTHER PTHR22726:SF1 73 278 3.3E-52 T 22-04-2016 RPIC_RS00215 98e5935d2af58a1eac44c4cb8f9fc557 314 PANTHER PTHR22726 73 278 3.3E-52 T 22-04-2016 RPIC_RS00215 98e5935d2af58a1eac44c4cb8f9fc557 314 Pfam PF01435 Peptidase family M48 106 264 6.3E-29 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 SUPERFAMILY SSF56420 1 165 1.11E-58 T 22-04-2016 IPR023635 Peptide deformylase RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 Pfam PF01327 Polypeptide deformylase 3 157 6.3E-49 T 22-04-2016 IPR023635 Peptide deformylase RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PANTHER PTHR10458 1 165 1.9E-80 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PIRSF PIRSF004749 1 170 7.8E-51 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 159 3.3E-36 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PRINTS PR01576 Peptide deformylase signature 128 157 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PRINTS PR01576 Peptide deformylase signature 33 62 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PRINTS PR01576 Peptide deformylase signature 109 127 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PRINTS PR01576 Peptide deformylase signature 97 108 2.0E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 Gene3D G3DSA:3.90.45.10 1 165 1.8E-55 T 22-04-2016 IPR023635 Peptide deformylase RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 PANTHER PTHR10458:SF4 1 165 1.9E-80 T 22-04-2016 RPIC_RS06325 62c4df8b9a23dd34a51e31c15645ef54 177 Hamap MF_00163 Peptide deformylase [def]. 1 170 27.343 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS09965 b8ce0f38a6b781ac82b337aab5ee892b 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 30 292 3.6E-79 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RPIC_RS09965 b8ce0f38a6b781ac82b337aab5ee892b 294 PANTHER PTHR30425 20 294 1.1E-113 T 22-04-2016 RPIC_RS09965 b8ce0f38a6b781ac82b337aab5ee892b 294 PANTHER PTHR30425:SF0 20 294 1.1E-113 T 22-04-2016 RPIC_RS09965 b8ce0f38a6b781ac82b337aab5ee892b 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 291 3.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09965 b8ce0f38a6b781ac82b337aab5ee892b 294 SUPERFAMILY SSF161098 33 286 4.45E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09965 b8ce0f38a6b781ac82b337aab5ee892b 294 Gene3D G3DSA:1.10.3720.10 29 293 1.0E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 Gene3D G3DSA:3.30.1540.10 244 320 1.3E-15 T 22-04-2016 RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 PANTHER PTHR24023 82 357 2.0E-52 T 22-04-2016 RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 Pfam PF02515 CoA-transferase family III 14 353 1.7E-97 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 SUPERFAMILY SSF89796 12 366 6.41E-108 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 Gene3D G3DSA:3.40.50.10540 11 230 9.0E-92 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 Gene3D G3DSA:3.40.50.10540 321 366 9.0E-92 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS06200 afbb907ed9dc25854d35366cf1a743bd 368 PANTHER PTHR24023:SF545 82 357 2.0E-52 T 22-04-2016 RPIC_RS08985 f01130aeb778be8608fd6e8b63f40d9a 159 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 57 159 9.7E-9 T 22-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 RPIC_RS08985 f01130aeb778be8608fd6e8b63f40d9a 159 PANTHER PTHR38439 43 159 3.1E-12 T 22-04-2016 RPIC_RS08985 f01130aeb778be8608fd6e8b63f40d9a 159 Gene3D G3DSA:2.60.40.420 39 159 3.5E-36 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08985 f01130aeb778be8608fd6e8b63f40d9a 159 PANTHER PTHR38439:SF1 43 159 3.1E-12 T 22-04-2016 RPIC_RS08985 f01130aeb778be8608fd6e8b63f40d9a 159 SUPERFAMILY SSF49503 48 159 5.45E-33 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS04710 bfba5a6d56175ac8b50cc23b49557e72 244 SUPERFAMILY SSF52833 40 154 3.36E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS04710 bfba5a6d56175ac8b50cc23b49557e72 244 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 232 4.3E-92 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like RPIC_RS04710 bfba5a6d56175ac8b50cc23b49557e72 244 Gene3D G3DSA:3.40.30.10 81 204 4.2E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15510 964986600ed871623a301069129543f4 155 PANTHER PTHR26402 3 127 6.3E-31 T 22-04-2016 RPIC_RS15510 964986600ed871623a301069129543f4 155 SUPERFAMILY SSF52172 5 130 5.55E-30 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS15510 964986600ed871623a301069129543f4 155 Pfam PF00072 Response regulator receiver domain 5 127 4.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15510 964986600ed871623a301069129543f4 155 SMART SM00448 3 127 3.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS15510 964986600ed871623a301069129543f4 155 Gene3D G3DSA:3.40.50.2300 5 130 8.3E-34 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 SUPERFAMILY SSF111369 149 199 2.48E-8 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 Gene3D G3DSA:2.40.50.100 74 107 5.1E-14 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 Gene3D G3DSA:2.40.50.100 228 261 5.1E-14 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 PANTHER PTHR30386 2 389 2.3E-161 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 PANTHER PTHR30386:SF6 2 389 2.3E-161 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 SUPERFAMILY SSF111369 192 280 1.31E-6 T 22-04-2016 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 72 302 3.1E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 Pfam PF00529 HlyD membrane-fusion protein of T1SS 163 359 1.1E-14 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS05585 47b6137b759643fd98598ca6aa58b357 429 SUPERFAMILY SSF111369 73 120 2.48E-8 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 PANTHER PTHR10169 300 548 3.3E-193 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 PANTHER PTHR10169 15 273 3.3E-193 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 PANTHER PTHR10169:SF30 300 548 3.3E-193 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 PANTHER PTHR10169:SF30 15 273 3.3E-193 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 Gene3D G3DSA:2.120.10.90 522 741 1.0E-27 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 SUPERFAMILY SSF101904 526 766 1.7E-45 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 Gene3D G3DSA:3.90.199.10 37 242 7.8E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 Gene3D G3DSA:3.90.199.10 361 426 7.8E-107 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 Gene3D G3DSA:3.30.1360.40 243 358 1.1E-20 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 SMART SM00434 17 489 1.7E-212 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 10 772 32.726 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 15 713 9.0E-226 T 22-04-2016 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 SUPERFAMILY SSF56719 37 511 2.75E-147 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC_RS04080 a0593e88e279f25679af703fd8d37fc5 780 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 488 2.2E-129 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 SUPERFAMILY SSF55424 346 472 3.95E-24 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 471 2.1E-20 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 Gene3D G3DSA:3.50.50.60 139 339 1.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 330 1.8E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 Gene3D G3DSA:3.50.50.60 8 138 1.6E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PIRSF PIRSF000350 2 472 1.8E-76 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PANTHER PTHR22912:SF106 1 474 1.1E-112 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.0E-29 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.0E-29 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 2.0E-29 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.0E-29 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 2.0E-29 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 Gene3D G3DSA:3.30.390.30 349 471 3.3E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 442 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 449 469 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 42 57 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 346 367 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.3E-59 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 PANTHER PTHR22912 1 474 1.1E-112 T 22-04-2016 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 43 53 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC_RS18560 4850073b5b5f66b05333cdb13ac84fcf 474 SUPERFAMILY SSF51905 9 339 3.65E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08055 f9b81c16ca2124161b400492a2b1c393 977 Pfam PF13700 Domain of unknown function (DUF4158) 14 168 4.3E-26 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RPIC_RS08055 f9b81c16ca2124161b400492a2b1c393 977 Pfam PF01526 Tn3 transposase DDE domain 568 952 1.6E-115 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 700 745 4.0E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 810 856 2.6E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 806 1.1E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 595 642 1.1E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 545 592 2.8E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 695 4.8E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 SUPERFAMILY SSF56719 30 528 5.49E-181 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 7.0E-155 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Gene3D G3DSA:1.10.268.10 363 504 5.3E-48 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 SMART SM00434 11 506 1.4E-286 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 PANTHER PTHR10169 457 826 0.0 T 22-04-2016 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 PANTHER PTHR10169 2 414 0.0 T 22-04-2016 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Gene3D G3DSA:3.30.1360.40 236 333 4.9E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 SUPERFAMILY SSF101904 540 866 6.02E-108 T 22-04-2016 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Gene3D G3DSA:3.90.199.10 34 216 2.3E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Gene3D G3DSA:2.120.10.90 538 856 1.8E-134 T 22-04-2016 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 860 29.494 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 PANTHER PTHR10169:SF48 457 826 0.0 T 22-04-2016 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 PANTHER PTHR10169:SF48 2 414 0.0 T 22-04-2016 RPIC_RS03775 117e1d5cb13f7fba3bd5872e7c868f74 889 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 857 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 Gene3D G3DSA:3.40.50.300 33 57 9.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 Hamap MF_00328 Guanylate kinase [gmk]. 18 201 35.206 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 Gene3D G3DSA:3.30.63.10 58 101 5.4E-26 T 22-04-2016 RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 SMART SM00072 19 201 8.1E-54 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 Pfam PF00625 Guanylate kinase 23 199 2.7E-46 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 Gene3D G3DSA:3.40.50.300 102 214 1.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 Gene3D G3DSA:3.40.50.300 19 32 1.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 SUPERFAMILY SSF52540 18 203 8.57E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 ProSitePatterns PS00856 Guanylate kinase-like signature. 54 71 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 21 198 7.0E-70 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RPIC_RS11215 349f4eebd7104111cc24addd28a2f395 221 PANTHER PTHR23117 19 221 2.5E-82 T 22-04-2016 RPIC_RS17305 60d90f2fe5fb120ede69b1390ce38e77 171 SUPERFAMILY SSF55729 1 162 8.27E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS17305 60d90f2fe5fb120ede69b1390ce38e77 171 PANTHER PTHR23091 1 165 4.1E-69 T 22-04-2016 RPIC_RS17305 60d90f2fe5fb120ede69b1390ce38e77 171 PANTHER PTHR23091:SF187 1 165 4.1E-69 T 22-04-2016 RPIC_RS17305 60d90f2fe5fb120ede69b1390ce38e77 171 Gene3D G3DSA:3.40.630.30 2 163 1.0E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS17305 60d90f2fe5fb120ede69b1390ce38e77 171 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 8.1E-17 T 22-04-2016 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 Gene3D G3DSA:3.40.50.970 336 538 2.0E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 Gene3D G3DSA:3.40.50.970 5 328 1.8E-134 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 ProSitePatterns PS00801 Transketolase signature 1. 22 42 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 SMART SM00861 364 534 2.5E-69 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 SUPERFAMILY SSF52922 542 670 2.75E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 SUPERFAMILY SSF52518 10 328 1.27E-122 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 343 1.8E-158 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 TIGRFAM TIGR00232 tktlase_bact: transketolase 16 670 2.4E-294 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 SUPERFAMILY SSF52518 351 534 2.85E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 PANTHER PTHR11624 350 671 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 PANTHER PTHR11624 10 319 0.0 T 22-04-2016 IPR033247 Transketolase family RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 PANTHER PTHR11624:SF1 350 671 0.0 T 22-04-2016 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 PANTHER PTHR11624:SF1 10 319 0.0 T 22-04-2016 RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 Pfam PF02779 Transketolase, pyrimidine binding domain 363 533 9.6E-46 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 Pfam PF02780 Transketolase, C-terminal domain 558 662 7.3E-17 T 22-04-2016 IPR033248 Transketolase, C-terminal domain RPIC_RS14720 03d3a19704d9f3c0e93a172ddc109a08 671 Gene3D G3DSA:3.40.50.920 547 670 1.1E-46 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS02780 f744b552fafa35e4cfeb3fc32ce9cea9 138 Gene3D G3DSA:1.10.760.10 29 136 7.2E-49 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS02780 f744b552fafa35e4cfeb3fc32ce9cea9 138 SUPERFAMILY SSF46626 31 135 1.02E-33 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS02780 f744b552fafa35e4cfeb3fc32ce9cea9 138 Pfam PF09086 Domain of unknown function (DUF1924) 44 133 5.7E-40 T 22-04-2016 IPR015170 Protein of unknown function DUF1924 RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 191 2.9E-9 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 PANTHER PTHR10681:SF99 3 207 1.1E-94 T 22-04-2016 RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 PANTHER PTHR10681 3 207 1.1E-94 T 22-04-2016 RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 Gene3D G3DSA:3.40.30.10 4 157 9.2E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 PIRSF PIRSF000239 1 209 2.3E-78 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 Gene3D G3DSA:3.30.1020.10 158 211 8.6E-27 T 22-04-2016 RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 SUPERFAMILY SSF52833 3 209 1.46E-68 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03445 11b949727124b5aec7e125ca785d461f 212 Pfam PF00578 AhpC/TSA family 6 134 1.0E-30 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS06030 63054bbc972146762d633b026204b940 343 Gene3D G3DSA:3.40.190.10 50 143 3.9E-6 T 22-04-2016 RPIC_RS06030 63054bbc972146762d633b026204b940 343 PANTHER PTHR30024 48 331 1.3E-116 T 22-04-2016 RPIC_RS06030 63054bbc972146762d633b026204b940 343 Pfam PF13379 NMT1-like family 47 274 4.5E-14 T 22-04-2016 RPIC_RS06030 63054bbc972146762d633b026204b940 343 SMART SM00062 50 269 2.5E-20 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS06030 63054bbc972146762d633b026204b940 343 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 51 329 5.8E-73 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 RPIC_RS06030 63054bbc972146762d633b026204b940 343 PANTHER PTHR30024:SF11 48 331 1.3E-116 T 22-04-2016 RPIC_RS06030 63054bbc972146762d633b026204b940 343 Gene3D G3DSA:3.40.190.10 144 252 1.4E-27 T 22-04-2016 RPIC_RS06030 63054bbc972146762d633b026204b940 343 SUPERFAMILY SSF53850 47 278 2.42E-48 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 SUPERFAMILY SSF51905 316 458 2.98E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 SUPERFAMILY SSF51905 13 219 2.98E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 69 7.1E-7 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 457 558 8.9E-51 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 SUPERFAMILY SSF54862 461 560 8.19E-29 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 7.5E-5 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 188 203 7.5E-5 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 SUPERFAMILY SSF54373 220 315 7.06E-37 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 Gene3D G3DSA:3.50.50.60 16 291 6.6E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 PANTHER PTHR10617 12 484 5.4E-240 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 Gene3D G3DSA:3.30.70.20 504 545 3.6E-4 T 22-04-2016 RPIC_RS09770 9239530eed309787966279d25ff8a6cd 561 PANTHER PTHR10617:SF107 12 484 5.4E-240 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 SUPERFAMILY SSF53850 6 269 1.02E-59 T 22-04-2016 RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 Gene3D G3DSA:3.40.190.10 229 269 1.5E-27 T 22-04-2016 RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 Gene3D G3DSA:3.40.190.10 34 120 1.5E-27 T 22-04-2016 RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 SMART SM00062 36 268 3.6E-58 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 PANTHER PTHR30085:SF2 6 293 1.3E-103 T 22-04-2016 RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 266 1.3E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 Gene3D G3DSA:3.40.190.10 121 228 2.7E-25 T 22-04-2016 RPIC_RS07300 c5eb0de2e2c14f70d1842a66a181f538 297 PANTHER PTHR30085 6 293 1.3E-103 T 22-04-2016 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 PANTHER PTHR10683 1 313 3.2E-180 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 SUPERFAMILY SSF51569 1 314 1.26E-114 T 22-04-2016 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 Pfam PF00923 Transaldolase 13 311 2.0E-99 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 TIGRFAM TIGR00874 talAB: transaldolase 3 313 1.2E-140 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 Gene3D G3DSA:3.20.20.70 1 313 2.6E-128 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 Hamap MF_00492 Transaldolase [tal]. 1 316 50.933 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS05345 1337f844081fd0b74ecf5b038a9820e3 319 PANTHER PTHR10683:SF18 1 313 3.2E-180 T 22-04-2016 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 235 6.3E-102 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 PANTHER PTHR21499 2 234 8.7E-112 T 22-04-2016 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 PANTHER PTHR21499:SF23 2 234 8.7E-112 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 PIRSF PIRSF005650 1 236 3.9E-93 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 Pfam PF00696 Amino acid kinase family 5 214 2.5E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 44.538 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 SUPERFAMILY SSF53633 2 235 8.77E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS06360 01bc0d18721c381bd93ebf52cc77525f 236 Gene3D G3DSA:3.40.1160.10 2 235 3.5E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 RPIC_RS07100 3a9f2e1dc35b3e5d36e06c54814e60d8 326 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 86 102 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RPIC_RS07100 3a9f2e1dc35b3e5d36e06c54814e60d8 326 Gene3D G3DSA:3.40.50.1820 20 320 2.7E-87 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS07100 3a9f2e1dc35b3e5d36e06c54814e60d8 326 Pfam PF07859 alpha/beta hydrolase fold 86 295 6.3E-76 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC_RS07100 3a9f2e1dc35b3e5d36e06c54814e60d8 326 PANTHER PTHR23024:SF24 54 317 1.8E-83 T 22-04-2016 RPIC_RS07100 3a9f2e1dc35b3e5d36e06c54814e60d8 326 SUPERFAMILY SSF53474 30 320 2.42E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS07100 3a9f2e1dc35b3e5d36e06c54814e60d8 326 PANTHER PTHR23024 54 317 1.8E-83 T 22-04-2016 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 7.6E-69 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 Gene3D G3DSA:1.20.58.220 126 230 1.5E-31 T 22-04-2016 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 PANTHER PTHR10010 1 233 8.9E-69 T 22-04-2016 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 PIRSF PIRSF003107 3 224 8.5E-62 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 Pfam PF01895 PhoU domain 127 210 1.3E-15 T 22-04-2016 IPR026022 PhoU domain RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 Pfam PF01895 PhoU domain 22 109 7.8E-19 T 22-04-2016 IPR026022 PhoU domain RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 Gene3D G3DSA:1.20.58.220 5 114 3.0E-31 T 22-04-2016 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 PANTHER PTHR10010:SF14 1 233 8.9E-69 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RPIC_RS09955 d7b8a578c71a523e346253987f585aa5 237 SUPERFAMILY SSF109755 8 227 1.88E-66 T 22-04-2016 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 PIRSF PIRSF001338 5 163 6.2E-62 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 SMART SM01001 8 159 5.4E-95 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 PANTHER PTHR23046:SF2 2 157 7.0E-77 T 22-04-2016 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 30.684 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 Pfam PF00731 AIR carboxylase 10 157 6.6E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 Gene3D G3DSA:3.40.50.7700 3 158 3.3E-70 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 PANTHER PTHR23046 2 157 7.0E-77 T 22-04-2016 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 157 2.4E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC_RS02430 ae0ec9836bcfa4bcdd3d248a070466f8 169 SUPERFAMILY SSF52255 9 162 1.09E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 PANTHER PTHR24220:SF165 278 316 1.1E-106 T 22-04-2016 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 PANTHER PTHR24220:SF165 17 252 1.1E-106 T 22-04-2016 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 Gene3D G3DSA:3.40.50.300 12 238 1.8E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 SMART SM00382 40 223 5.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 SUPERFAMILY SSF52540 14 236 6.16E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 PANTHER PTHR24220 278 316 1.1E-106 T 22-04-2016 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 PANTHER PTHR24220 17 252 1.1E-106 T 22-04-2016 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 TIGRFAM TIGR01288 nodI: nodulation ABC transporter NodI 17 320 2.9E-143 T 22-04-2016 IPR005978 Nodulation ABC transporter, NodI GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020 RPIC_RS10465 3c9263cf1a1bf88d05e99c16daa0030a 320 Pfam PF00005 ABC transporter 31 174 5.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS04935 874cd30e26d4e02c9f6b532f7986aacb 234 PANTHER PTHR11922:SF11 48 188 1.2E-40 T 22-04-2016 RPIC_RS04935 874cd30e26d4e02c9f6b532f7986aacb 234 Pfam PF00117 Glutamine amidotransferase class-I 31 183 5.1E-15 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC_RS04935 874cd30e26d4e02c9f6b532f7986aacb 234 PANTHER PTHR11922 48 188 1.2E-40 T 22-04-2016 RPIC_RS04935 874cd30e26d4e02c9f6b532f7986aacb 234 SUPERFAMILY SSF52317 9 230 1.44E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS04935 874cd30e26d4e02c9f6b532f7986aacb 234 Gene3D G3DSA:3.40.50.880 2 229 1.1E-51 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 Gene3D G3DSA:1.20.910.10 6 230 1.8E-109 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 SUPERFAMILY SSF48613 4 229 3.21E-70 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 236 132.95 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 9 231 9.2E-101 T 22-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 Pfam PF03070 TENA/THI-4/PQQC family 14 223 4.3E-52 T 22-04-2016 IPR004305 Thiaminase-2/PQQC RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 PANTHER PTHR40279 9 228 5.9E-106 T 22-04-2016 RPIC_RS12275 a94339ddca1e55d62c9f63231215859f 236 PANTHER PTHR40279:SF2 9 228 5.9E-106 T 22-04-2016 RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 Gene3D G3DSA:1.10.860.10 14 113 5.0E-31 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 SMART SM00382 204 400 9.9E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 SUPERFAMILY SSF48024 12 118 2.35E-28 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 PANTHER PTHR30153 1 451 1.3E-135 T 22-04-2016 RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 Pfam PF00772 DnaB-like helicase N terminal domain 12 112 2.8E-27 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 Pfam PF03796 DnaB-like helicase C terminal domain 187 439 4.5E-82 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 Gene3D G3DSA:3.40.50.300 186 441 7.0E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 13 441 6.2E-122 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RPIC_RS11470 cca9815a75d5171b205b9d052430885b 464 SUPERFAMILY SSF52540 186 432 8.92E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 248 34.5 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 PIRSF PIRSF001430 1 260 8.6E-72 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 Gene3D G3DSA:3.30.70.580 1 105 8.8E-37 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 Gene3D G3DSA:3.30.70.660 107 246 4.7E-43 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 SUPERFAMILY SSF55120 1 255 1.42E-86 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 PANTHER PTHR11142 1 250 9.6E-90 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 Pfam PF01416 tRNA pseudouridine synthase 147 249 4.9E-31 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 Pfam PF01416 tRNA pseudouridine synthase 9 104 7.0E-9 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS10520 a5650949a6468c4952a916eaedfa6f98 274 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 243 3.2E-64 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS09055 83616484218a6410137ff86fa8c9b52a 173 Pfam PF04205 FMN-binding domain 85 163 6.0E-11 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RPIC_RS09055 83616484218a6410137ff86fa8c9b52a 173 SMART SM00900 85 166 4.6E-13 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RPIC_RS07065 ec0843edd6aed5f785dd63489d645a95 346 SUPERFAMILY SSF103025 13 262 1.21E-61 T 22-04-2016 RPIC_RS07065 ec0843edd6aed5f785dd63489d645a95 346 Pfam PF01571 Aminomethyltransferase folate-binding domain 34 236 5.1E-15 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal RPIC_RS07065 ec0843edd6aed5f785dd63489d645a95 346 Gene3D G3DSA:3.30.70.1400 38 120 7.2E-26 T 22-04-2016 RPIC_RS07065 ec0843edd6aed5f785dd63489d645a95 346 PANTHER PTHR22602:SF0 34 303 8.0E-39 T 22-04-2016 RPIC_RS07065 ec0843edd6aed5f785dd63489d645a95 346 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 207 271 3.3E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site RPIC_RS07065 ec0843edd6aed5f785dd63489d645a95 346 PANTHER PTHR22602 34 303 8.0E-39 T 22-04-2016 RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 SUPERFAMILY SSF89919 11 115 1.1E-28 T 22-04-2016 IPR023799 Ribosome-binding factor A domain RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 116 1.5E-21 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 99 4.0E-43 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 PANTHER PTHR33515 14 123 5.5E-29 T 22-04-2016 RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 Gene3D G3DSA:3.30.300.20 11 119 2.0E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 119 18.966 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC_RS05560 8bb9f90d9f80030b663c767236469d75 123 Pfam PF02033 Ribosome-binding factor A 11 112 2.7E-25 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 SUPERFAMILY SSF53383 4 353 5.25E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 Gene3D G3DSA:3.40.640.10 38 255 9.1E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 Pfam PF00155 Aminotransferase class I and II 27 350 1.2E-53 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 55.63 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 Gene3D G3DSA:3.90.1150.10 256 354 5.8E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 PANTHER PTHR11751 3 353 1.6E-114 T 22-04-2016 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 PANTHER PTHR11751:SF398 3 353 1.6E-114 T 22-04-2016 RPIC_RS16685 f51a2722410f652e71ad4b5005aca97f 355 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 351 9.9E-91 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 277 54.914 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 166 190 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PANTHER PTHR10755 6 302 1.2E-159 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 Pfam PF01218 Coproporphyrinogen III oxidase 6 302 4.2E-122 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PIRSF PIRSF000166 1 302 2.7E-117 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PRINTS PR00073 Coprogen oxidase signature 125 147 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PRINTS PR00073 Coprogen oxidase signature 262 288 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PRINTS PR00073 Coprogen oxidase signature 90 114 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PRINTS PR00073 Coprogen oxidase signature 234 261 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PRINTS PR00073 Coprogen oxidase signature 162 191 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 PRINTS PR00073 Coprogen oxidase signature 27 43 5.5E-67 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 Gene3D G3DSA:3.40.1500.10 3 302 3.5E-124 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11775 a4cf2c7db66cb7c9ccbcf89c03699ecb 302 SUPERFAMILY SSF102886 4 302 6.28E-129 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Gene3D G3DSA:3.90.980.10 117 246 1.1E-40 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 SUPERFAMILY SSF117023 465 594 3.79E-7 T 22-04-2016 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 SMART SM00493 265 336 2.5E-14 T 22-04-2016 IPR006171 Toprim domain RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 TIGRFAM TIGR01391 dnaG: DNA primase 2 422 1.5E-136 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 SMART SM00766 463 593 1.7E-21 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 257 3.2E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Gene3D G3DSA:3.40.1360.10 247 373 5.7E-44 T 22-04-2016 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Gene3D G3DSA:1.20.50.20 374 431 2.4E-18 T 22-04-2016 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Gene3D G3DSA:3.90.580.10 2 98 5.3E-40 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 SUPERFAMILY SSF57783 2 97 1.34E-36 T 22-04-2016 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 PANTHER PTHR30313 1 602 1.2E-140 T 22-04-2016 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 SMART SM00400 33 87 4.4E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 SUPERFAMILY SSF56731 116 427 4.58E-101 T 22-04-2016 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Pfam PF01807 CHC2 zinc finger 3 97 2.8E-39 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Hamap MF_00974 DNA primase [dnaG]. 1 593 28.325 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Pfam PF08278 DNA primase DnaG DnaB-binding 465 592 1.5E-14 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Pfam PF13662 Toprim domain 266 334 4.8E-16 T 22-04-2016 IPR006171 Toprim domain RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Pfam PF10410 DnaB-helicase binding domain of primase 375 428 2.9E-10 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 RPIC_RS11935 471fb80389172893ec380f4161fc94a7 603 Gene3D G3DSA:1.10.860.10 450 596 1.1E-10 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIC_RS08085 e4d1737ccb8b44ee0a525ac903c0903b 112 Pfam PF11604 Copper binding periplasmic protein CusF 46 110 2.0E-20 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF RPIC_RS11520 806b4ce346c595a0f1ecb3368fcf0330 461 PANTHER PTHR14202:SF1 30 411 7.4E-46 T 22-04-2016 RPIC_RS11520 806b4ce346c595a0f1ecb3368fcf0330 461 SUPERFAMILY SSF53300 306 459 4.89E-20 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS11520 806b4ce346c595a0f1ecb3368fcf0330 461 Pfam PF05731 TROVE domain 211 283 3.0E-6 T 22-04-2016 IPR008858 TROVE domain GO:0003723 RPIC_RS11520 806b4ce346c595a0f1ecb3368fcf0330 461 PANTHER PTHR14202 30 411 7.4E-46 T 22-04-2016 RPIC_RS11520 806b4ce346c595a0f1ecb3368fcf0330 461 SUPERFAMILY SSF140864 19 303 6.8E-34 T 22-04-2016 RPIC_RS24880 35daa08959fb55a640c94bf459a683a5 361 Pfam PF02486 Replication initiation factor 152 273 7.1E-27 T 22-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 RPIC_RS01980 842c0ac557d823f1a7a67ff7f35af8a8 503 Gene3D G3DSA:3.60.110.10 216 465 5.7E-23 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS01980 842c0ac557d823f1a7a67ff7f35af8a8 503 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 6 486 22.657 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RPIC_RS01980 842c0ac557d823f1a7a67ff7f35af8a8 503 SUPERFAMILY SSF56317 216 477 5.36E-34 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS01980 842c0ac557d823f1a7a67ff7f35af8a8 503 PANTHER PTHR38686 1 502 4.9E-80 T 22-04-2016 RPIC_RS01980 842c0ac557d823f1a7a67ff7f35af8a8 503 Pfam PF00795 Carbon-nitrogen hydrolase 238 466 1.2E-27 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RPIC_RS01980 842c0ac557d823f1a7a67ff7f35af8a8 503 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 60 448 2.7E-114 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 185 6.8E-52 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 37.8 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 Pfam PF00436 Single-strand binding protein family 4 107 1.6E-40 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 SUPERFAMILY SSF50249 3 185 5.43E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 Gene3D G3DSA:2.40.50.140 165 185 5.4E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 Gene3D G3DSA:2.40.50.140 1 121 5.4E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01355 d1a47979b59d6bc14ab65b8cafca7c60 185 PANTHER PTHR10302 3 185 4.7E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 RPIC_RS08145 d7b6bc70b9f28473d4cacda3c72a089e 220 PANTHER PTHR12714:SF11 9 213 1.1E-20 T 22-04-2016 RPIC_RS08145 d7b6bc70b9f28473d4cacda3c72a089e 220 PANTHER PTHR12714 9 213 1.1E-20 T 22-04-2016 RPIC_RS08145 d7b6bc70b9f28473d4cacda3c72a089e 220 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 104 190 2.3E-8 T 22-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 RPIC_RS15900 5c1f362b1ce7698ea815981f18b8cb2a 124 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 99 1.3E-26 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RPIC_RS15900 5c1f362b1ce7698ea815981f18b8cb2a 124 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 99 21.805 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RPIC_RS15900 5c1f362b1ce7698ea815981f18b8cb2a 124 SUPERFAMILY SSF101386 4 103 1.31E-21 T 22-04-2016 RPIC_RS15900 5c1f362b1ce7698ea815981f18b8cb2a 124 PANTHER PTHR21256 3 121 7.8E-34 T 22-04-2016 RPIC_RS15900 5c1f362b1ce7698ea815981f18b8cb2a 124 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 22 102 1.0E-12 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 PANTHER PTHR11956:SF6 1 596 3.6E-211 T 22-04-2016 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 13 596 2.6E-123 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 SUPERFAMILY SSF52374 120 406 4.5E-80 T 22-04-2016 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 SUPERFAMILY SSF52374 437 485 4.5E-80 T 22-04-2016 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 SMART SM01016 7 95 9.8E-37 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Pfam PF00750 tRNA synthetases class I (R) 105 414 8.6E-20 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 596 25.286 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 95 3.8E-23 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Pfam PF05746 DALR anticodon binding domain 475 596 3.0E-36 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 SUPERFAMILY SSF55190 4 115 5.49E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 312 333 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 2.9E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Gene3D G3DSA:3.30.1360.70 4 114 1.4E-30 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 SMART SM00836 475 596 3.3E-50 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Gene3D G3DSA:1.10.730.10 479 596 9.0E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 PANTHER PTHR11956 1 596 3.6E-211 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 Gene3D G3DSA:3.40.50.620 118 478 2.5E-106 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS00660 0683c57185f6fc09e06f37f2eda1af3e 596 SUPERFAMILY SSF47323 470 596 6.34E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 Pfam PF00156 Phosphoribosyl transferase domain 47 161 9.8E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 194 3.0E-53 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 SUPERFAMILY SSF53271 8 202 1.12E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 225 31.75 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 PANTHER PTHR19278:SF36 8 225 1.9E-88 T 22-04-2016 RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 Gene3D G3DSA:3.40.50.2020 10 221 1.5E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS00190 851ea97e37d2f19879636b63491dfc64 225 PANTHER PTHR19278 8 225 1.9E-88 T 22-04-2016 RPIC_RS04730 546126f233918feb5692d900aa07efd0 564 Pfam PF01368 DHH family 75 200 8.4E-10 T 22-04-2016 IPR001667 DDH domain RPIC_RS04730 546126f233918feb5692d900aa07efd0 564 PANTHER PTHR30255 1 564 6.7E-201 T 22-04-2016 RPIC_RS04730 546126f233918feb5692d900aa07efd0 564 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 562 5.0E-146 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RPIC_RS04730 546126f233918feb5692d900aa07efd0 564 Pfam PF02272 DHHA1 domain 379 447 1.6E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RPIC_RS04730 546126f233918feb5692d900aa07efd0 564 SUPERFAMILY SSF64182 48 461 1.12E-117 T 22-04-2016 RPIC_RS04730 546126f233918feb5692d900aa07efd0 564 PANTHER PTHR30255:SF2 1 564 6.7E-201 T 22-04-2016 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 Gene3D G3DSA:1.10.3860.10 3 409 2.2E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PANTHER PTHR11958:SF26 5 405 1.3E-151 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 SUPERFAMILY SSF118215 6 405 3.14E-111 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PANTHER PTHR11958 5 405 1.3E-151 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 Pfam PF00375 Sodium:dicarboxylate symporter family 7 403 2.1E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 226 245 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS10350 264f71cea3d7804854f2f1e23e768cf4 425 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 3.8E-42 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 PANTHER PTHR11562:SF17 5 295 6.8E-104 T 22-04-2016 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 Pfam PF01545 Cation efflux family 17 208 8.4E-44 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 Gene3D G3DSA:3.30.70.1350 213 286 5.6E-4 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 287 5.0E-96 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 SUPERFAMILY SSF161111 13 209 3.4E-56 T 22-04-2016 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 SUPERFAMILY SSF160240 212 287 2.22E-9 T 22-04-2016 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 PANTHER PTHR11562 5 295 6.8E-104 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08640 67e8c33a3934ae1f9e8b8a26b48b092c 316 Gene3D G3DSA:1.20.1510.10 14 208 2.4E-58 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 Gene3D G3DSA:3.40.50.620 4 174 9.4E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 PANTHER PTHR11587:SF2 1 426 4.5E-175 T 22-04-2016 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 Gene3D G3DSA:1.10.287.400 377 440 8.0E-33 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 Pfam PF00764 Arginosuccinate synthase 16 406 7.0E-60 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 PANTHER PTHR11587 1 426 4.5E-175 T 22-04-2016 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 SUPERFAMILY SSF69864 190 441 3.01E-79 T 22-04-2016 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 420 5.1E-158 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 444 69.222 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 Gene3D G3DSA:3.90.1260.10 175 373 8.7E-66 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 RPIC_RS13935 b082f9e725284a8adf809c24645a66ba 445 SUPERFAMILY SSF52402 4 184 6.05E-31 T 22-04-2016 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 Pfam PF03717 Penicillin-binding Protein dimerisation domain 77 225 2.8E-19 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 Gene3D G3DSA:3.40.710.10 248 570 1.6E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 PANTHER PTHR30627:SF1 18 589 3.6E-200 T 22-04-2016 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 Gene3D G3DSA:3.90.1310.10 148 247 9.5E-28 T 22-04-2016 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 SUPERFAMILY SSF56519 73 237 2.62E-42 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 PANTHER PTHR30627 18 589 3.6E-200 T 22-04-2016 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 562 1.5E-69 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIC_RS15255 88bf7c77124bfa2976239cc029a15554 595 SUPERFAMILY SSF56601 241 571 4.27E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 Gene3D G3DSA:1.10.3860.10 6 406 6.6E-118 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.808 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 2.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 2.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 2.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 2.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 2.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 2.5E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PANTHER PTHR11958 2 421 1.5E-246 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 7.2E-113 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 SUPERFAMILY SSF118215 9 402 2.09E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS00900 6e09492a8e579abd8fd7ad2fb93ee0bd 429 PANTHER PTHR11958:SF49 2 421 1.5E-246 T 22-04-2016 RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 SUPERFAMILY SSF55804 1 149 1.23E-44 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 Gene3D G3DSA:3.40.930.10 1 148 2.0E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 148 3.9E-43 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 PANTHER PTHR30505 1 148 3.4E-42 T 22-04-2016 RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 PANTHER PTHR30505:SF6 1 148 3.4E-42 T 22-04-2016 RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 4.8E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS01275 dcc89550efe408c216a535464d5d2f65 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- RPIC_RS15375 93fba934431fae05d6a0a4e3a3e760bc 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC_RS15375 93fba934431fae05d6a0a4e3a3e760bc 258 Gene3D G3DSA:3.90.226.10 1 256 9.1E-98 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS15375 93fba934431fae05d6a0a4e3a3e760bc 258 PANTHER PTHR11941 1 255 8.8E-123 T 22-04-2016 RPIC_RS15375 93fba934431fae05d6a0a4e3a3e760bc 258 SUPERFAMILY SSF52096 1 257 6.15E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS15375 93fba934431fae05d6a0a4e3a3e760bc 258 PANTHER PTHR11941:SF54 1 255 8.8E-123 T 22-04-2016 RPIC_RS15375 93fba934431fae05d6a0a4e3a3e760bc 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 4.4E-83 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS01280 456461651b5d0f12efdaf1530d452de6 117 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 6.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC_RS01280 456461651b5d0f12efdaf1530d452de6 117 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 1.1E-25 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC_RS01280 456461651b5d0f12efdaf1530d452de6 117 Gene3D G3DSA:3.30.160.100 1 100 2.8E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC_RS01280 456461651b5d0f12efdaf1530d452de6 117 SUPERFAMILY SSF69754 1 107 5.49E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RPIC_RS01280 456461651b5d0f12efdaf1530d452de6 117 PANTHER PTHR33231 1 103 5.0E-31 T 22-04-2016 RPIC_RS16745 52e7ee1ff9057b1b3d3630f099cc0db4 187 Pfam PF02525 Flavodoxin-like fold 5 171 9.5E-46 T 22-04-2016 IPR003680 Flavodoxin-like fold RPIC_RS16745 52e7ee1ff9057b1b3d3630f099cc0db4 187 PANTHER PTHR10204 4 178 2.3E-53 T 22-04-2016 RPIC_RS16745 52e7ee1ff9057b1b3d3630f099cc0db4 187 PANTHER PTHR10204:SF42 4 178 2.3E-53 T 22-04-2016 RPIC_RS16745 52e7ee1ff9057b1b3d3630f099cc0db4 187 Gene3D G3DSA:3.40.50.360 4 176 1.8E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS16745 52e7ee1ff9057b1b3d3630f099cc0db4 187 SUPERFAMILY SSF52218 4 176 8.58E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PANTHER PTHR22778:SF16 1 161 7.6E-47 T 22-04-2016 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 Gene3D G3DSA:3.40.430.10 2 161 2.0E-62 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 Pfam PF00186 Dihydrofolate reductase 4 161 3.1E-60 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PRINTS PR00070 Dihydrofolate reductase signature 93 107 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.1E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PIRSF PIRSF000194 1 164 1.2E-64 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 SUPERFAMILY SSF53597 3 161 6.59E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC_RS04005 fd9fe6fa9d693ab88fad5cd7f75cf49d 167 PANTHER PTHR22778 1 161 7.6E-47 T 22-04-2016 RPIC_RS15730 126937e95bd8815dc9484fd53ab8b405 262 SUPERFAMILY SSF50494 19 219 5.4E-11 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC_RS15730 126937e95bd8815dc9484fd53ab8b405 262 Gene3D G3DSA:2.40.10.10 27 118 3.2E-5 T 22-04-2016 RPIC_RS15730 126937e95bd8815dc9484fd53ab8b405 262 Pfam PF13365 Trypsin-like peptidase domain 44 197 1.5E-7 T 22-04-2016 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 Pfam PF03150 Di-haem cytochrome c peroxidase 47 225 1.5E-29 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 SUPERFAMILY SSF46626 40 186 3.7E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 PANTHER PTHR30600:SF5 378 413 4.8E-68 T 22-04-2016 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 Gene3D G3DSA:1.10.760.10 43 215 6.0E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 SUPERFAMILY SSF46626 309 404 3.57E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 SUPERFAMILY SSF46626 202 277 3.57E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 PANTHER PTHR30600 51 346 4.8E-68 T 22-04-2016 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 Gene3D G3DSA:1.10.760.10 383 408 4.1E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 Gene3D G3DSA:1.10.760.10 216 346 4.1E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 PANTHER PTHR30600 378 413 4.8E-68 T 22-04-2016 RPIC_RS13575 1b095def87571092d4b37a7d150c928e 446 PANTHER PTHR30600:SF5 51 346 4.8E-68 T 22-04-2016 RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 Gene3D G3DSA:1.10.860.10 15 117 3.5E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 Pfam PF03796 DnaB-like helicase C terminal domain 195 450 1.6E-118 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 SUPERFAMILY SSF52540 193 444 1.57E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 Pfam PF00772 DnaB-like helicase N terminal domain 15 116 3.0E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 Gene3D G3DSA:3.40.50.300 179 451 3.9E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 SMART SM00382 212 417 0.0086 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 15 452 4.8E-179 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 PANTHER PTHR30153 1 460 1.6E-212 T 22-04-2016 RPIC_RS05890 a06d350fe89b9c02ef26bc3c098d1a9f 462 SUPERFAMILY SSF48024 13 124 1.57E-36 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 Gene3D G3DSA:3.30.420.40 352 391 1.1E-13 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 Gene3D G3DSA:3.30.420.40 181 214 1.1E-13 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 SUPERFAMILY SSF53067 6 171 1.36E-31 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PRINTS PR00301 70kDa heat shock protein signature 32 44 1.7E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PRINTS PR00301 70kDa heat shock protein signature 186 196 1.7E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PRINTS PR00301 70kDa heat shock protein signature 4 17 1.7E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PRINTS PR00301 70kDa heat shock protein signature 120 140 1.7E-6 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 SUPERFAMILY SSF53067 175 243 2.82E-31 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 SUPERFAMILY SSF53067 292 413 2.82E-31 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PANTHER PTHR19375 3 236 3.9E-97 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PANTHER PTHR19375 287 409 3.9E-97 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PANTHER PTHR19375:SF182 3 236 3.9E-97 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 PANTHER PTHR19375:SF182 287 409 3.9E-97 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 370 384 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 Pfam PF00012 Hsp70 protein 89 226 2.3E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 Pfam PF00012 Hsp70 protein 297 389 2.4E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 Gene3D G3DSA:3.30.420.40 6 68 4.7E-29 T 22-04-2016 RPIC_RS17065 cdcd5768d3266549ecd5251d19667a82 417 Gene3D G3DSA:3.30.420.40 101 180 4.7E-29 T 22-04-2016 RPIC_RS09200 b0875f1ef513643aa94a999f01bd9a1d 221 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 41 219 1.7E-80 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 RPIC_RS09200 b0875f1ef513643aa94a999f01bd9a1d 221 PANTHER PTHR11403 41 221 4.5E-95 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RPIC_RS09200 b0875f1ef513643aa94a999f01bd9a1d 221 PANTHER PTHR11403:SF2 41 221 4.5E-95 T 22-04-2016 RPIC_RS09200 b0875f1ef513643aa94a999f01bd9a1d 221 SUPERFAMILY SSF81452 28 218 5.89E-57 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC_RS09200 b0875f1ef513643aa94a999f01bd9a1d 221 Gene3D G3DSA:1.20.120.80 39 218 2.3E-50 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RPIC_RS09200 b0875f1ef513643aa94a999f01bd9a1d 221 Pfam PF00510 Cytochrome c oxidase subunit III 32 218 3.2E-16 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 PANTHER PTHR10949 45 332 2.4E-163 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 TIGRFAM TIGR00510 lipA: lipoyl synthase 45 327 9.0E-128 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 Gene3D G3DSA:3.20.20.70 65 326 1.1E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 SMART SM00729 96 304 8.6E-20 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 Hamap MF_00206 Lipoyl synthase [lipA]. 48 333 152.022 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 44 85 2.7E-6 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 SUPERFAMILY SSF102114 64 329 2.88E-68 T 22-04-2016 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 Pfam PF04055 Radical SAM superfamily 103 263 7.9E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS00860 96aec6ff263dd7f0f0755bfa79168848 333 PIRSF PIRSF005963 3 332 3.2E-128 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 PANTHER PTHR11271:SF43 30 359 4.7E-27 T 22-04-2016 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 SUPERFAMILY SSF51556 59 348 4.08E-11 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 Gene3D G3DSA:2.30.40.10 318 365 1.2E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 PIRSF PIRSF038971 12 382 2.2E-105 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 Gene3D G3DSA:2.30.40.10 21 99 4.0E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 PANTHER PTHR11271 30 359 4.7E-27 T 22-04-2016 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 Pfam PF01979 Amidohydrolase family 164 366 4.1E-6 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 SUPERFAMILY SSF51338 23 59 2.85E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS02490 d8ada5e1d410a3ab63f423052b2170f9 391 SUPERFAMILY SSF51338 348 385 2.85E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Gene3D G3DSA:3.40.120.10 181 255 4.0E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 259 1.2E-18 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 446 2.8E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 143 1.0E-41 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Gene3D G3DSA:3.40.120.10 3 157 4.5E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 239 254 6.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 100 114 6.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 6.3E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 SUPERFAMILY SSF53738 161 261 1.73E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 1.1E-178 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 SUPERFAMILY SSF53738 2 186 3.73E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 101 110 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 445 45.934 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 SUPERFAMILY SSF55957 363 446 1.31E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 369 4.4E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 PANTHER PTHR22573 2 447 1.2E-157 T 22-04-2016 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 SUPERFAMILY SSF53738 263 370 9.42E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Gene3D G3DSA:3.30.310.50 374 446 5.4E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 PANTHER PTHR22573:SF15 2 447 1.2E-157 T 22-04-2016 RPIC_RS09980 96ef3b67c88031e2c788cd3045f5dedc 447 Gene3D G3DSA:3.40.120.10 256 370 3.9E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 Gene3D G3DSA:1.20.58.340 243 319 3.7E-27 T 22-04-2016 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 PANTHER PTHR21535 1 319 1.5E-99 T 22-04-2016 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 Pfam PF01544 CorA-like Mg2+ transporter protein 29 315 5.1E-58 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 SUPERFAMILY SSF144083 254 317 3.14E-20 T 22-04-2016 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 2 319 4.6E-76 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 PANTHER PTHR21535:SF37 1 319 1.5E-99 T 22-04-2016 RPIC_RS14870 7d4ea8eb3dcab7dfb0c749e407d4f455 320 SUPERFAMILY SSF143865 1 258 1.57E-37 T 22-04-2016 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 Hamap MF_00142 Protein CyaY [cyaY]. 4 111 25.324 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 Gene3D G3DSA:3.30.920.10 4 111 9.3E-28 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 PANTHER PTHR16821 1 111 7.1E-20 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 ProSitePatterns PS01344 Frataxin family signature. 55 69 - T 22-04-2016 IPR020895 Frataxin conserved site RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 Pfam PF01491 Frataxin-like domain 4 107 7.4E-24 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 6 110 4.3E-35 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 SMART SM01219 4 112 8.8E-48 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS16070 d4625a235106dc0e8a2233617208aa90 114 SUPERFAMILY SSF55387 3 109 2.09E-31 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 RPIC_RS17845 ea203ffd21a5524dda6032bf5874c386 281 PANTHER PTHR35010 4 276 1.5E-75 T 22-04-2016 RPIC_RS17845 ea203ffd21a5524dda6032bf5874c386 281 SMART SM00530 22 95 3.3E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS17845 ea203ffd21a5524dda6032bf5874c386 281 Gene3D G3DSA:1.10.260.40 15 94 1.9E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS17845 ea203ffd21a5524dda6032bf5874c386 281 Pfam PF13560 Helix-turn-helix domain 18 98 1.1E-16 T 22-04-2016 RPIC_RS17845 ea203ffd21a5524dda6032bf5874c386 281 SUPERFAMILY SSF47413 43 94 2.6E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS17845 ea203ffd21a5524dda6032bf5874c386 281 PANTHER PTHR35010:SF2 4 276 1.5E-75 T 22-04-2016 RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 PANTHER PTHR24064 27 478 2.4E-177 T 22-04-2016 RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 SUPERFAMILY SSF103473 29 477 2.62E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 Gene3D G3DSA:1.20.1250.20 291 472 5.8E-20 T 22-04-2016 RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 Pfam PF00083 Sugar (and other) transporter 44 477 6.6E-47 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 PANTHER PTHR24064:SF277 27 478 2.4E-177 T 22-04-2016 RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 Gene3D G3DSA:1.20.1250.20 41 235 8.2E-21 T 22-04-2016 RPIC_RS10160 7dd4b9d816d44be6e58f5f4a0fb4b0d7 479 ProSitePatterns PS00217 Sugar transport proteins signature 2. 147 172 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS14040 dc6cf0c7d27a4ef4b2013a5c313570cd 156 PANTHER PTHR34128:SF1 3 156 1.3E-52 T 22-04-2016 RPIC_RS14040 dc6cf0c7d27a4ef4b2013a5c313570cd 156 Gene3D G3DSA:2.40.50.140 26 124 7.4E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS14040 dc6cf0c7d27a4ef4b2013a5c313570cd 156 PANTHER PTHR34128 3 156 1.3E-52 T 22-04-2016 RPIC_RS14040 dc6cf0c7d27a4ef4b2013a5c313570cd 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 33.207 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RPIC_RS14040 dc6cf0c7d27a4ef4b2013a5c313570cd 156 Pfam PF03100 CcmE 3 130 5.9E-47 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RPIC_RS14040 dc6cf0c7d27a4ef4b2013a5c313570cd 156 SUPERFAMILY SSF82093 29 136 1.44E-40 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 PANTHER PTHR11908 210 239 1.8E-38 T 22-04-2016 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 PANTHER PTHR11908 64 192 1.8E-38 T 22-04-2016 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 103 111 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 Pfam PF01799 [2Fe-2S] binding domain 137 235 4.3E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 SUPERFAMILY SSF54292 66 142 1.44E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 Gene3D G3DSA:3.10.20.30 65 138 1.2E-31 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 Gene3D G3DSA:1.10.150.120 139 242 1.1E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 PANTHER PTHR11908:SF66 210 239 1.8E-38 T 22-04-2016 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 PANTHER PTHR11908:SF66 64 192 1.8E-38 T 22-04-2016 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 70 120 8.7E-8 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS16725 5b3833c542781349d01fedf8f88b3a7f 246 SUPERFAMILY SSF47741 155 242 8.77E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 4.1E-26 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 Gene3D G3DSA:3.30.70.1150 83 162 7.9E-29 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 Gene3D G3DSA:3.30.70.260 1 78 9.2E-37 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 Pfam PF13710 ACT domain 12 73 1.8E-15 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 SUPERFAMILY SSF55021 79 162 1.68E-25 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 6.0E-37 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 PANTHER PTHR30239 1 161 2.2E-82 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 SUPERFAMILY SSF55021 1 76 2.37E-22 T 22-04-2016 RPIC_RS10955 e390bf3f8da92f6dd80aca6ee8c3952d 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 3.3E-63 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PIRSF PIRSF001365 1 294 4.1E-92 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 289 1.1E-103 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PANTHER PTHR12128 2 294 3.4E-136 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 1.4E-111 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 SUPERFAMILY SSF51569 1 291 2.41E-104 T 22-04-2016 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 67.654 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 SMART SM01130 3 291 5.0E-145 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 5.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 5.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 5.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 5.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 Gene3D G3DSA:3.20.20.70 2 293 4.2E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS04875 a8a8b514a7e09d362fdc907d21c82bd9 294 PANTHER PTHR12128:SF34 2 294 3.4E-136 T 22-04-2016 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 6.1E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 PANTHER PTHR11953 1 236 1.4E-79 T 22-04-2016 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 SUPERFAMILY SSF55666 152 236 6.15E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.219 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 SUPERFAMILY SSF54211 1 181 2.18E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 Gene3D G3DSA:3.30.230.70 7 236 5.0E-32 T 22-04-2016 IPR027408 PNPase/RNase PH domain RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.4E-119 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 9.1E-19 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 RPIC_RS11235 71ac05650b8a004e625cb70e0dd902ec 238 PANTHER PTHR11953:SF0 1 236 1.4E-79 T 22-04-2016 RPIC_RS02245 58ae5bb9f5e9e8f977d0e4ca6924cb81 81 SUPERFAMILY SSF47413 14 77 2.56E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS02245 58ae5bb9f5e9e8f977d0e4ca6924cb81 81 SMART SM00530 20 75 5.1E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS02245 58ae5bb9f5e9e8f977d0e4ca6924cb81 81 Pfam PF13560 Helix-turn-helix domain 17 75 6.3E-12 T 22-04-2016 RPIC_RS02245 58ae5bb9f5e9e8f977d0e4ca6924cb81 81 Gene3D G3DSA:1.10.260.40 17 79 3.7E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS10640 f742ccd42fc990b8047ad76aeb7db812 174 PANTHER PTHR34610 12 165 5.1E-24 T 22-04-2016 RPIC_RS10640 f742ccd42fc990b8047ad76aeb7db812 174 SUPERFAMILY SSF88723 17 138 2.07E-12 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS10640 f742ccd42fc990b8047ad76aeb7db812 174 SMART SM00670 16 137 5.6E-5 T 22-04-2016 IPR002716 PIN domain RPIC_RS10640 f742ccd42fc990b8047ad76aeb7db812 174 PANTHER PTHR34610:SF3 12 165 5.1E-24 T 22-04-2016 RPIC_RS10640 f742ccd42fc990b8047ad76aeb7db812 174 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 17 138 4.1E-8 T 22-04-2016 IPR002850 PIN family, putative toxin-antitoxin system toxin component RPIC_RS10640 f742ccd42fc990b8047ad76aeb7db812 174 Pfam PF13470 PIN domain 17 134 5.2E-30 T 22-04-2016 IPR002716 PIN domain RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 189 19.359 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 Gene3D G3DSA:3.90.1140.10 5 190 3.6E-38 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 PANTHER PTHR35561:SF1 5 191 6.5E-24 T 22-04-2016 RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 SUPERFAMILY SSF55144 5 190 5.76E-31 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 5 188 1.8E-29 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 PANTHER PTHR35561 5 191 6.5E-24 T 22-04-2016 RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 Pfam PF02834 LigT like Phosphoesterase 106 181 6.1E-10 T 22-04-2016 IPR014051 Phosphoesterase, HXTX RPIC_RS08480 bdc94ba91e18bc916dc93ed296fab8c7 192 Pfam PF02834 LigT like Phosphoesterase 11 96 2.0E-13 T 22-04-2016 IPR014051 Phosphoesterase, HXTX RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SUPERFAMILY SSF55785 474 605 1.34E-8 T 22-04-2016 IPR000014 PAS domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SMART SM00091 361 428 6.5E-10 T 22-04-2016 IPR000014 PAS domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SMART SM00091 489 556 59.0 T 22-04-2016 IPR000014 PAS domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 Pfam PF13188 PAS domain 490 542 0.006 T 22-04-2016 IPR000014 PAS domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PANTHER PTHR24423:SF505 606 855 2.6E-76 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PANTHER PTHR24423:SF505 47 52 2.6E-76 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PANTHER PTHR24423:SF505 359 475 2.6E-76 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SMART SM00086 435 477 3.2E-7 T 22-04-2016 IPR001610 PAC motif RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 Gene3D G3DSA:3.30.565.10 699 856 1.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SUPERFAMILY SSF55874 705 854 1.44E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SUPERFAMILY SSF47384 622 697 4.12E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 Gene3D G3DSA:3.30.450.20 347 474 2.9E-24 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 Gene3D G3DSA:3.30.450.20 475 605 1.2E-8 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 743 856 1.0E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 484 1.7E-28 T 22-04-2016 IPR000014 PAS domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 Pfam PF00989 PAS fold 362 474 1.6E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SMART SM00388 629 699 3.1E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 801 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 805 815 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 816 834 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 841 854 2.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SUPERFAMILY SSF55785 348 475 7.33E-26 T 22-04-2016 IPR000014 PAS domain RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PANTHER PTHR24423 606 855 2.6E-76 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PANTHER PTHR24423 47 52 2.6E-76 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 PANTHER PTHR24423 359 475 2.6E-76 T 22-04-2016 RPIC_RS09570 e129d81142b6371f26c6630f19c8e696 858 SMART SM00387 741 857 6.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08485 ee43c1e2c8d88289ade1d6a775f777b7 297 SUPERFAMILY SSF56349 26 289 1.53E-23 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS08485 ee43c1e2c8d88289ade1d6a775f777b7 297 Pfam PF00589 Phage integrase family 134 289 7.3E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08485 ee43c1e2c8d88289ade1d6a775f777b7 297 Gene3D G3DSA:1.10.443.10 133 289 1.2E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08485 ee43c1e2c8d88289ade1d6a775f777b7 297 PANTHER PTHR30349 42 291 1.3E-13 T 22-04-2016 RPIC_RS08485 ee43c1e2c8d88289ade1d6a775f777b7 297 PANTHER PTHR30349:SF5 42 291 1.3E-13 T 22-04-2016 RPIC_RS04780 e3a5c702fbe51a8aab147321fdf40349 273 Gene3D G3DSA:3.40.50.1820 4 261 1.4E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04780 e3a5c702fbe51a8aab147321fdf40349 273 PANTHER PTHR10992 2 261 8.8E-19 T 22-04-2016 RPIC_RS04780 e3a5c702fbe51a8aab147321fdf40349 273 Pfam PF12697 Alpha/beta hydrolase family 6 252 1.6E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS04780 e3a5c702fbe51a8aab147321fdf40349 273 SUPERFAMILY SSF53474 148 259 1.09E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04780 e3a5c702fbe51a8aab147321fdf40349 273 SUPERFAMILY SSF53474 4 104 1.09E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 Pfam PF17200 Single Cache domain 2 38 184 2.6E-41 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 SMART SM00283 266 513 1.7E-88 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 PANTHER PTHR32089:SF63 176 516 3.6E-144 T 22-04-2016 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 Gene3D G3DSA:1.10.287.950 281 485 1.7E-61 T 22-04-2016 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 512 2.1E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 SMART SM01049 33 127 2.5E-34 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 9.8E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 9.8E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 9.8E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 9.8E-57 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 Gene3D G3DSA:3.30.450.20 22 180 4.1E-48 T 22-04-2016 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 SUPERFAMILY SSF58104 241 519 3.01E-71 T 22-04-2016 RPIC_RS04920 e57dc2dcde5c30a5afe468bcb7312336 621 PANTHER PTHR32089 176 516 3.6E-144 T 22-04-2016 RPIC_RS05485 5ae7c667bddf8d975e68946fd552b68f 59 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 44 1.7E-19 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RPIC_RS05485 5ae7c667bddf8d975e68946fd552b68f 59 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 5.8E-16 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type RPIC_RS03655 a42efa27872ae12bd087289bc4600085 371 Pfam PF06516 Purine nucleoside permease (NUP) 59 369 6.7E-129 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC_RS03655 a42efa27872ae12bd087289bc4600085 371 PANTHER PTHR38643 61 364 5.0E-96 T 22-04-2016 RPIC_RS03655 a42efa27872ae12bd087289bc4600085 371 Gene3D G3DSA:3.40.50.1580 58 144 5.7E-7 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RPIC_RS03655 a42efa27872ae12bd087289bc4600085 371 PIRSF PIRSF013171 6 371 6.3E-168 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 SUPERFAMILY SSF53850 91 299 1.22E-35 T 22-04-2016 RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 Gene3D G3DSA:3.40.190.10 181 268 1.6E-14 T 22-04-2016 RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 Gene3D G3DSA:3.40.190.10 93 180 1.9E-16 T 22-04-2016 RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 SUPERFAMILY SSF46785 4 113 1.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 Gene3D G3DSA:1.10.10.10 4 88 5.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 PANTHER PTHR30419:SF2 1 315 3.4E-77 T 22-04-2016 RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 Pfam PF03466 LysR substrate binding domain 90 295 1.8E-30 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS10155 63f84c1dc421d77be00596c47924d1b9 322 PANTHER PTHR30419 1 315 3.4E-77 T 22-04-2016 RPIC_RS06865 95c64c2c47033e4bc84617aab045cb48 129 SUPERFAMILY SSF47413 21 58 7.84E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS06865 95c64c2c47033e4bc84617aab045cb48 129 Gene3D G3DSA:1.10.260.40 5 58 5.4E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF56784 424 443 1.61E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF56784 482 728 1.61E-57 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 427 433 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Gene3D G3DSA:2.70.150.10 172 326 3.1E-31 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Pfam PF00122 E1-E2 ATPase 195 416 2.7E-68 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Gene3D G3DSA:3.40.50.1000 396 439 2.5E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Gene3D G3DSA:3.40.50.1000 556 696 2.5E-53 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 526 707 7.7E-42 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 197 447 1.3E-46 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Pfam PF00702 haloacid dehalogenase-like hydrolase 422 642 3.4E-40 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00943 Copper-transporting ATPase signature 605 622 7.8E-10 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00943 Copper-transporting ATPase signature 408 423 7.8E-10 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00943 Copper-transporting ATPase signature 141 160 7.8E-10 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00943 Copper-transporting ATPase signature 194 213 7.8E-10 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00943 Copper-transporting ATPase signature 214 232 7.8E-10 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00943 Copper-transporting ATPase signature 348 362 7.8E-10 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Gene3D G3DSA:3.30.70.100 12 76 2.9E-24 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Pfam PF00403 Heavy-metal-associated domain 14 71 1.2E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 137 731 2.0E-173 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 Gene3D G3DSA:3.40.1110.10 440 555 2.9E-13 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 425 439 1.9E-26 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 628 647 1.9E-26 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 1.9E-26 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 275 289 1.9E-26 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 663 1.9E-26 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF81665 326 419 8.63E-14 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF81665 192 228 8.63E-14 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF81665 677 707 8.63E-14 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PANTHER PTHR24093 13 734 3.7E-260 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF55008 7 77 1.44E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 ProSitePatterns PS01047 Heavy-metal-associated domain. 16 45 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 156 730 1.3E-185 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 SUPERFAMILY SSF81653 228 325 1.57E-27 T 22-04-2016 RPIC_RS17565 fe92e023bb3ee1ce4aac528a5daa2d03 740 PANTHER PTHR24093:SF332 13 734 3.7E-260 T 22-04-2016 RPIC_RS00330 756fab513599db61caad7579dd59b549 158 PANTHER PTHR35585 13 143 1.6E-17 T 22-04-2016 RPIC_RS00330 756fab513599db61caad7579dd59b549 158 Gene3D G3DSA:1.20.120.520 23 149 2.8E-12 T 22-04-2016 RPIC_RS00330 756fab513599db61caad7579dd59b549 158 Pfam PF01814 Hemerythrin HHE cation binding domain 14 131 1.3E-15 T 22-04-2016 IPR012312 Haemerythrin-like RPIC_RS00330 756fab513599db61caad7579dd59b549 158 PANTHER PTHR35585:SF1 13 143 1.6E-17 T 22-04-2016 RPIC_RS02605 08fbeb00dad1d89d8b37105e192e48f9 245 Pfam PF04403 Paraquat-inducible protein A 79 235 6.3E-53 T 22-04-2016 IPR007498 Paraquat-inducible protein A RPIC_RS02605 08fbeb00dad1d89d8b37105e192e48f9 245 PANTHER PTHR30462:SF3 62 244 2.1E-50 T 22-04-2016 RPIC_RS02605 08fbeb00dad1d89d8b37105e192e48f9 245 PANTHER PTHR30462 62 244 2.1E-50 T 22-04-2016 RPIC_RS02315 49fd34c3efa431269a8694fd4778701d 159 Gene3D G3DSA:1.10.10.10 57 90 1.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02315 49fd34c3efa431269a8694fd4778701d 159 Pfam PF02631 RecX family 37 146 1.3E-24 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RPIC_RS02315 49fd34c3efa431269a8694fd4778701d 159 Hamap MF_01114 Regulatory protein RecX [recX]. 5 152 12.882 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 RPIC_RS02315 49fd34c3efa431269a8694fd4778701d 159 Gene3D G3DSA:1.10.10.10 9 55 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02315 49fd34c3efa431269a8694fd4778701d 159 Gene3D G3DSA:1.10.10.10 105 149 2.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02315 49fd34c3efa431269a8694fd4778701d 159 PANTHER PTHR33602 10 159 2.7E-19 T 22-04-2016 RPIC_RS07915 4601c688f229cc787fc4469948d4664e 691 Pfam PF01145 SPFH domain / Band 7 family 322 531 4.0E-27 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS07915 4601c688f229cc787fc4469948d4664e 691 SUPERFAMILY SSF117892 405 521 6.8E-7 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 Pfam PF00107 Zinc-binding dehydrogenase 170 282 1.3E-15 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 Gene3D G3DSA:3.40.50.720 149 303 5.5E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 Gene3D G3DSA:3.90.180.10 34 148 3.7E-6 T 22-04-2016 IPR011032 GroES-like RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 34 336 2.2E-130 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 SUPERFAMILY SSF51735 128 298 4.17E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 SMART SM00829 20 334 5.4E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 PANTHER PTHR11695 27 338 1.0E-146 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 PANTHER PTHR11695:SF13 27 338 1.0E-146 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 SUPERFAMILY SSF50129 33 156 1.05E-38 T 22-04-2016 IPR011032 GroES-like RPIC_RS15465 81204cc1525b61b8ef73427b606785aa 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 40 113 1.0E-5 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 52.402 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 PANTHER PTHR21057 1 284 4.0E-158 T 22-04-2016 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 SUPERFAMILY SSF51569 2 275 1.1E-100 T 22-04-2016 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 PANTHER PTHR21057:SF2 1 284 4.0E-158 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 Pfam PF00793 DAHP synthetase I family 6 273 5.6E-67 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 4.4E-122 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS04790 d07b4bcd7b58ceb5a5a3dd6e86a3c67d 284 Gene3D G3DSA:3.20.20.70 11 276 8.7E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS11920 d81f0ba74571433c73c1d5524a3b9715 531 Pfam PF11170 Protein of unknown function (DUF2957) 90 528 8.7E-146 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 Pfam PF01380 SIS domain 149 272 4.1E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 Gene3D G3DSA:3.40.50.10490 121 280 1.2E-22 T 22-04-2016 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 PANTHER PTHR30514:SF3 21 317 6.4E-35 T 22-04-2016 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 Gene3D G3DSA:1.10.10.10 21 93 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 SUPERFAMILY SSF53697 116 279 1.72E-25 T 22-04-2016 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 Pfam PF01418 Helix-turn-helix domain, rpiR family 22 90 9.2E-12 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 SUPERFAMILY SSF46689 22 93 1.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS06210 4245ca5274a9208400e2721712d156f9 329 PANTHER PTHR30514 21 317 6.4E-35 T 22-04-2016 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 SUPERFAMILY SSF50475 3 338 6.28E-113 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 Gene3D G3DSA:3.40.1670.10 353 470 4.8E-54 T 22-04-2016 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 PANTHER PTHR30108:SF1 1 501 2.7E-239 T 22-04-2016 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 471 8.1E-157 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 Gene3D G3DSA:1.20.5.570 471 501 7.3E-17 T 22-04-2016 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 SUPERFAMILY SSF143968 339 501 1.96E-66 T 22-04-2016 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 503 71.83 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 PANTHER PTHR30108 1 501 2.7E-239 T 22-04-2016 RPIC_RS03210 453f4b8debd2e2eb824a98debc667c37 503 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 447 1.3E-163 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 135 2.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 154 166 2.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 167 179 2.9E-7 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 11 195 1.3E-60 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 SUPERFAMILY SSF50022 31 197 1.29E-36 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 PANTHER PTHR10134 1 199 3.9E-67 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 PANTHER PTHR10134:SF8 1 199 3.9E-67 T 22-04-2016 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 1 40 1.0E-8 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 Gene3D G3DSA:2.102.10.10 16 199 4.5E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS15820 71b368e18e21723ef0cdd0a06a408183 202 Pfam PF00355 Rieske [2Fe-2S] domain 54 182 2.6E-12 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS14095 251471725d407c8c8133ae522994827f 224 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 197 3.1E-22 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 RPIC_RS14095 251471725d407c8c8133ae522994827f 224 PANTHER PTHR10000 1 223 5.4E-49 T 22-04-2016 RPIC_RS14095 251471725d407c8c8133ae522994827f 224 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 207 2.9E-39 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial RPIC_RS14095 251471725d407c8c8133ae522994827f 224 SUPERFAMILY SSF56784 2 219 1.0E-33 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS14095 251471725d407c8c8133ae522994827f 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 195 7.7E-44 T 22-04-2016 RPIC_RS14095 251471725d407c8c8133ae522994827f 224 Gene3D G3DSA:3.40.50.1000 81 223 4.6E-50 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS14095 251471725d407c8c8133ae522994827f 224 PANTHER PTHR10000:SF10 1 223 5.4E-49 T 22-04-2016 RPIC_RS14095 251471725d407c8c8133ae522994827f 224 Gene3D G3DSA:1.20.1440.100 15 80 7.7E-36 T 22-04-2016 RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 SMART SM00382 26 213 9.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 Gene3D G3DSA:3.40.50.300 1 236 3.7E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 SUPERFAMILY SSF52540 1 235 1.15E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 Pfam PF00005 ABC transporter 19 165 4.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 PANTHER PTHR24220 3 239 5.6E-147 T 22-04-2016 RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 PANTHER PTHR24220:SF474 3 239 5.6E-147 T 22-04-2016 RPIC_RS12155 f476e9bd44596906af8d09cd64372d46 247 PIRSF PIRSF039085 1 241 2.1E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 271 288 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 Gene3D G3DSA:1.20.1250.20 214 395 2.6E-17 T 22-04-2016 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 Gene3D G3DSA:1.20.1250.20 10 187 6.3E-28 T 22-04-2016 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 PANTHER PTHR23501 12 363 3.1E-79 T 22-04-2016 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 Pfam PF07690 Major Facilitator Superfamily 16 241 1.6E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 PANTHER PTHR23501:SF19 12 363 3.1E-79 T 22-04-2016 RPIC_RS17920 c1f23715634bb3264241966a6f173859 439 SUPERFAMILY SSF103473 6 400 9.55E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 Pfam PF00462 Glutaredoxin 4 64 1.1E-19 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 PRINTS PR00160 Glutaredoxin signature 61 74 4.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 PRINTS PR00160 Glutaredoxin signature 47 60 4.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 PRINTS PR00160 Glutaredoxin signature 4 22 4.3E-14 T 22-04-2016 IPR014025 Glutaredoxin subgroup RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 5.1E-32 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 PANTHER PTHR10168 4 83 8.0E-24 T 22-04-2016 RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 SUPERFAMILY SSF52833 1 84 2.45E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01025 ded2609587734aa692b67ddc3ae7f44d 85 Gene3D G3DSA:3.40.30.10 1 74 5.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS09285 15d1b0bfcb6e6742aeb8da52243c7575 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 384 4.6E-76 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS09285 15d1b0bfcb6e6742aeb8da52243c7575 402 PANTHER PTHR30469 16 396 2.0E-80 T 22-04-2016 RPIC_RS09285 15d1b0bfcb6e6742aeb8da52243c7575 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 298 2.2E-25 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS09285 15d1b0bfcb6e6742aeb8da52243c7575 402 Gene3D G3DSA:2.40.50.100 192 223 7.5E-17 T 22-04-2016 RPIC_RS09285 15d1b0bfcb6e6742aeb8da52243c7575 402 Gene3D G3DSA:2.40.50.100 89 117 7.5E-17 T 22-04-2016 RPIC_RS09285 15d1b0bfcb6e6742aeb8da52243c7575 402 SUPERFAMILY SSF111369 72 300 1.7E-24 T 22-04-2016 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 Hamap MF_00105 Transcription elongation factor GreA [greA]. 28 181 26.543 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 Gene3D G3DSA:1.10.287.180 29 101 3.5E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 PANTHER PTHR30437:SF6 1 187 9.1E-59 T 22-04-2016 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 PIRSF PIRSF006092 27 184 1.0E-41 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 Pfam PF03449 Transcription elongation factor, N-terminal 30 100 1.8E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 43 74 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 182 1.0E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 146 162 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 Hamap MF_00930 Transcription elongation factor GreB [greB]. 27 183 49.936 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 SUPERFAMILY SSF54534 108 182 6.67E-20 T 22-04-2016 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 PANTHER PTHR30437 1 187 9.1E-59 T 22-04-2016 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 SUPERFAMILY SSF46557 29 103 1.83E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 29 183 3.5E-65 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 RPIC_RS11195 ccd9b8d447f5db66e512e022955494e5 187 Gene3D G3DSA:3.10.50.30 107 185 1.5E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 SUPERFAMILY SSF51366 1 266 2.0E-89 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 PANTHER PTHR22854:SF2 1 267 1.2E-107 T 22-04-2016 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 PANTHER PTHR22854 1 267 1.2E-107 T 22-04-2016 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 Gene3D G3DSA:3.20.20.70 1 266 3.0E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 267 36.21 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 61 79 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RPIC_RS15440 3de870d95fc569bf5b6ff178d7d41d02 267 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 264 1.4E-95 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 RPIC_RS13775 395261da04116f2d2e08d837bc176740 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 1.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13775 395261da04116f2d2e08d837bc176740 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 7.6E-30 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS13775 395261da04116f2d2e08d837bc176740 222 PANTHER PTHR30614 1 221 8.8E-95 T 22-04-2016 RPIC_RS13775 395261da04116f2d2e08d837bc176740 222 Gene3D G3DSA:1.10.3720.10 12 216 2.4E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13775 395261da04116f2d2e08d837bc176740 222 SUPERFAMILY SSF161098 12 201 6.76E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS03215 378c69a1c7b1722a4b82f523966a3815 395 SUPERFAMILY SSF53955 213 309 3.18E-20 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS03215 378c69a1c7b1722a4b82f523966a3815 395 PANTHER PTHR21666 201 313 2.2E-16 T 22-04-2016 RPIC_RS03215 378c69a1c7b1722a4b82f523966a3815 395 Gene3D G3DSA:1.10.530.10 221 311 6.1E-20 T 22-04-2016 RPIC_RS03215 378c69a1c7b1722a4b82f523966a3815 395 Pfam PF01464 Transglycosylase SLT domain 224 301 2.7E-14 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 Gene3D G3DSA:3.40.50.1820 2 260 5.6E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 Pfam PF00561 alpha/beta hydrolase fold 24 246 7.0E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.7E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 PANTHER PTHR10992:SF861 18 261 2.5E-62 T 22-04-2016 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 PANTHER PTHR10992 18 261 2.5E-62 T 22-04-2016 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 260 1.7E-103 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC_RS12105 4d823dba29df5ecdbc5e9bc3b3056433 270 SUPERFAMILY SSF53474 1 259 1.52E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS01125 c2238de14c7573b4e500699a7c825821 134 Gene3D G3DSA:3.30.300.20 9 129 1.1E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS01125 c2238de14c7573b4e500699a7c825821 134 Pfam PF02566 OsmC-like protein 33 126 1.0E-16 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC_RS01125 c2238de14c7573b4e500699a7c825821 134 PANTHER PTHR39624 24 134 1.8E-23 T 22-04-2016 RPIC_RS01125 c2238de14c7573b4e500699a7c825821 134 PANTHER PTHR39624:SF2 24 134 1.8E-23 T 22-04-2016 RPIC_RS01125 c2238de14c7573b4e500699a7c825821 134 SUPERFAMILY SSF82784 11 123 2.49E-25 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 Gene3D G3DSA:2.40.30.10 337 441 9.7E-11 T 22-04-2016 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 Gene3D G3DSA:3.40.50.300 4 233 1.1E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 SUPERFAMILY SSF52540 17 232 2.59E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 Pfam PF03144 Elongation factor Tu domain 2 268 327 1.8E-7 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 Pfam PF00009 Elongation factor Tu GTP binding domain 19 212 2.7E-36 T 22-04-2016 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 SUPERFAMILY SSF50465 338 440 1.39E-31 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PANTHER PTHR23115 20 235 9.9E-60 T 22-04-2016 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PANTHER PTHR23115 256 328 9.9E-60 T 22-04-2016 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 Gene3D G3DSA:2.40.30.10 242 329 5.0E-18 T 22-04-2016 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 SUPERFAMILY SSF50447 242 330 6.24E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PRINTS PR00315 GTP-binding elongation factor signature 161 170 4.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PRINTS PR00315 GTP-binding elongation factor signature 116 127 4.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PRINTS PR00315 GTP-binding elongation factor signature 20 33 4.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PRINTS PR00315 GTP-binding elongation factor signature 80 88 4.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 PRINTS PR00315 GTP-binding elongation factor signature 100 110 4.4E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 73 88 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC_RS13225 f65a7c2935f1fe2accb0ed1a472e6f2f 443 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 19 439 2.4E-159 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 Gene3D G3DSA:3.30.70.1450 586 656 4.9E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 Pfam PF02254 TrkA-N domain 413 526 1.3E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 SUPERFAMILY SSF116726 578 656 2.75E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 Pfam PF00999 Sodium/hydrogen exchanger family 8 376 1.3E-64 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 SUPERFAMILY SSF51735 410 550 1.11E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 Gene3D G3DSA:3.40.50.720 409 541 2.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 Pfam PF02080 TrkA-C domain 588 656 5.6E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RPIC_RS01315 74f501013290a09e3cb9bb7a48eed5f5 659 PANTHER PTHR16254 8 570 5.6E-161 T 22-04-2016 RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 646 679 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PANTHER PTHR30332:SF8 54 771 2.1E-172 T 22-04-2016 RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PANTHER PTHR30332 54 771 2.1E-172 T 22-04-2016 RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 Pfam PF03958 Bacterial type II/III secretion system short domain 153 212 9.5E-12 T 22-04-2016 IPR005644 NolW-like RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 Pfam PF03958 Bacterial type II/III secretion system short domain 303 434 8.5E-16 T 22-04-2016 IPR005644 NolW-like RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 Pfam PF03958 Bacterial type II/III secretion system short domain 216 297 9.1E-17 T 22-04-2016 IPR005644 NolW-like RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 56 705 1.6E-190 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PRINTS PR00811 Bacterial general secretion pathway protein D signature 565 575 2.3E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PRINTS PR00811 Bacterial general secretion pathway protein D signature 688 702 2.3E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PRINTS PR00811 Bacterial general secretion pathway protein D signature 665 683 2.3E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PRINTS PR00811 Bacterial general secretion pathway protein D signature 434 444 2.3E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 PRINTS PR00811 Bacterial general secretion pathway protein D signature 530 554 2.3E-29 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16830 ec104ba76fb1836daa918f90d715246c 807 Pfam PF00263 Bacterial type II and III secretion system protein 534 701 2.3E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RPIC_RS05990 c097a24ee41fb98141e7a301b224f64b 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 85 4.5E-25 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 RPIC_RS05990 c097a24ee41fb98141e7a301b224f64b 85 Gene3D G3DSA:3.10.20.30 1 85 1.2E-24 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS05990 c097a24ee41fb98141e7a301b224f64b 85 SUPERFAMILY SSF54285 1 83 1.81E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIC_RS05990 c097a24ee41fb98141e7a301b224f64b 85 Pfam PF02597 ThiS family 6 85 1.2E-18 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RPIC_RS05990 c097a24ee41fb98141e7a301b224f64b 85 PANTHER PTHR33359 1 85 1.2E-21 T 22-04-2016 RPIC_RS05990 c097a24ee41fb98141e7a301b224f64b 85 PANTHER PTHR33359:SF1 1 85 1.2E-21 T 22-04-2016 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 SUPERFAMILY SSF53383 21 366 7.43E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 18 370 54.927 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 Pfam PF00155 Aminotransferase class I and II 37 365 9.4E-44 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 PANTHER PTHR11751 14 373 2.2E-65 T 22-04-2016 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 Gene3D G3DSA:3.90.1150.10 271 370 1.9E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 Gene3D G3DSA:3.40.640.10 51 270 3.4E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 20 366 1.2E-93 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC_RS15935 180f66172baf98f76de4ceec11ac0e54 374 PANTHER PTHR11751:SF347 14 373 2.2E-65 T 22-04-2016 RPIC_RS17480 f52e180cfc8df6f1c91671607a530427 77 PANTHER PTHR30537 1 76 2.0E-14 T 22-04-2016 RPIC_RS17480 f52e180cfc8df6f1c91671607a530427 77 Gene3D G3DSA:3.40.190.10 1 33 6.8E-9 T 22-04-2016 RPIC_RS17480 f52e180cfc8df6f1c91671607a530427 77 Pfam PF03466 LysR substrate binding domain 1 66 7.8E-13 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS17480 f52e180cfc8df6f1c91671607a530427 77 SUPERFAMILY SSF53850 1 70 1.74E-12 T 22-04-2016 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 Gene3D G3DSA:1.10.150.240 18 90 1.5E-28 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 6 189 8.7E-27 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 SUPERFAMILY SSF56784 4 226 7.98E-49 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 Gene3D G3DSA:3.40.50.1000 91 225 1.1E-38 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PANTHER PTHR12725 1 228 3.0E-23 T 22-04-2016 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 Pfam PF00702 haloacid dehalogenase-like hydrolase 4 185 7.9E-12 T 22-04-2016 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 200 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 30 43 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.1E-32 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS06135 9ef8af7af4feda9a8f82248967026c1d 232 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 4 204 2.1E-72 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 RPIC_RS01755 8a5d97fed75db0190e0af0bebdcf758d 242 PANTHER PTHR30085 1 240 8.5E-123 T 22-04-2016 RPIC_RS01755 8a5d97fed75db0190e0af0bebdcf758d 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 234 7.0E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01755 8a5d97fed75db0190e0af0bebdcf758d 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 120 4.1E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS01755 8a5d97fed75db0190e0af0bebdcf758d 242 PANTHER PTHR30085:SF4 1 240 8.5E-123 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 RPIC_RS01755 8a5d97fed75db0190e0af0bebdcf758d 242 Gene3D G3DSA:1.10.3720.10 20 232 2.4E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01755 8a5d97fed75db0190e0af0bebdcf758d 242 SUPERFAMILY SSF161098 23 219 7.59E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09220 a78be2c265d7a655de99000844f246f4 62 Pfam PF05532 CsbD-like 4 56 4.4E-15 T 22-04-2016 IPR008462 CsbD-like RPIC_RS09220 a78be2c265d7a655de99000844f246f4 62 Gene3D G3DSA:1.10.1470.10 1 60 4.0E-16 T 22-04-2016 IPR008462 CsbD-like RPIC_RS09220 a78be2c265d7a655de99000844f246f4 62 SUPERFAMILY SSF69047 1 59 1.31E-13 T 22-04-2016 IPR008462 CsbD-like RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 PANTHER PTHR24322:SF317 11 191 1.5E-55 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.5E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.5E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 PANTHER PTHR24322 11 191 1.5E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 2.8E-82 T 22-04-2016 RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 Gene3D G3DSA:3.40.50.720 2 253 1.3E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 SUPERFAMILY SSF51735 6 253 1.42E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05015 1cb1787af73a6003e136c1c5a3dd00d7 264 PIRSF PIRSF000094 1 259 1.8E-112 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 27 313 1.5E-117 T 22-04-2016 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 Gene3D G3DSA:3.60.15.10 28 267 7.3E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 SMART SM00849 57 241 4.9E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 Pfam PF00753 Metallo-beta-lactamase superfamily 54 241 5.2E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 PANTHER PTHR11935 11 117 2.5E-17 T 22-04-2016 RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 PANTHER PTHR11935 137 259 2.5E-17 T 22-04-2016 RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 PANTHER PTHR11935:SF95 11 117 2.5E-17 T 22-04-2016 RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 PANTHER PTHR11935:SF95 137 259 2.5E-17 T 22-04-2016 RPIC_RS12325 8e9edc46cc57e9c8684e1c9be14563c4 315 SUPERFAMILY SSF56281 4 294 6.24E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 SUPERFAMILY SSF54373 176 274 2.94E-43 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.718945E-28 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.718945E-28 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 2.718945E-28 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 2.718945E-28 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 Gene3D G3DSA:3.50.50.60 2 49 9.4E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 Gene3D G3DSA:3.50.50.60 99 150 9.4E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 PANTHER PTHR13789:SF192 1 392 5.5E-203 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 PANTHER PTHR13789 1 392 5.5E-203 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 Pfam PF01494 FAD binding domain 3 342 2.0E-84 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 Gene3D G3DSA:3.30.9.10 151 299 1.8E-68 T 22-04-2016 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 5.1E-179 T 22-04-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 SUPERFAMILY SSF51905 1 172 2.79E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12065 7e6ff62628576d5e9e3a0ed3a55fc1d2 408 SUPERFAMILY SSF51905 274 390 2.79E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 551 674 1.5E-11 T 22-04-2016 IPR000014 PAS domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 SMART SM00267 801 972 2.2E-57 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 PANTHER PTHR10799 792 972 4.6E-37 T 22-04-2016 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 SUPERFAMILY SSF55073 817 970 4.08E-47 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 Gene3D G3DSA:3.30.450.20 545 665 3.5E-17 T 22-04-2016 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 Gene3D G3DSA:3.30.450.20 666 799 1.9E-14 T 22-04-2016 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 Gene3D G3DSA:3.30.70.270 814 970 5.8E-54 T 22-04-2016 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 SUPERFAMILY SSF55785 543 665 9.63E-19 T 22-04-2016 IPR000014 PAS domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 Pfam PF08448 PAS fold 685 803 4.7E-6 T 22-04-2016 IPR013656 PAS fold-4 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 Pfam PF08448 PAS fold 562 668 7.9E-14 T 22-04-2016 IPR013656 PAS fold-4 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 808 970 2.1E-43 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 SMART SM00091 679 745 0.75 T 22-04-2016 IPR000014 PAS domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 SMART SM00091 555 621 5.0E-5 T 22-04-2016 IPR000014 PAS domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 PANTHER PTHR10799:SF774 792 972 4.6E-37 T 22-04-2016 RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 SUPERFAMILY SSF55785 665 799 5.06E-14 T 22-04-2016 IPR000014 PAS domain RPIC_RS01120 92491aeba4a6877570f9820c7354698a 972 Pfam PF00990 Diguanylate cyclase, GGDEF domain 812 970 2.6E-45 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS12400 7b3eb9cb786e333a67006ef5f29f23c5 261 Pfam PF00639 PPIC-type PPIASE domain 112 204 2.4E-19 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RPIC_RS12400 7b3eb9cb786e333a67006ef5f29f23c5 261 PANTHER PTHR10657:SF11 86 248 1.3E-25 T 22-04-2016 RPIC_RS12400 7b3eb9cb786e333a67006ef5f29f23c5 261 SUPERFAMILY SSF54534 102 206 7.85E-21 T 22-04-2016 RPIC_RS12400 7b3eb9cb786e333a67006ef5f29f23c5 261 PANTHER PTHR10657 86 248 1.3E-25 T 22-04-2016 RPIC_RS12400 7b3eb9cb786e333a67006ef5f29f23c5 261 Gene3D G3DSA:3.10.50.40 99 228 3.8E-25 T 22-04-2016 RPIC_RS12400 7b3eb9cb786e333a67006ef5f29f23c5 261 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 144 164 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RPIC_RS15000 765e823e66489bd31651b442d697d2d5 360 Pfam PF10994 Protein of unknown function (DUF2817) 7 346 1.6E-133 T 22-04-2016 IPR021259 Protein of unknown function DUF2817 RPIC_RS15000 765e823e66489bd31651b442d697d2d5 360 Gene3D G3DSA:3.40.630.10 186 299 4.5E-24 T 22-04-2016 RPIC_RS15000 765e823e66489bd31651b442d697d2d5 360 Gene3D G3DSA:3.40.630.10 6 131 4.5E-24 T 22-04-2016 RPIC_RS15000 765e823e66489bd31651b442d697d2d5 360 SUPERFAMILY SSF53187 55 127 7.86E-23 T 22-04-2016 RPIC_RS15000 765e823e66489bd31651b442d697d2d5 360 SUPERFAMILY SSF53187 186 325 7.86E-23 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Pfam PF02867 Ribonucleotide reductase, barrel domain 373 912 2.0E-182 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 583 594 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 663 685 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 448 467 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 767 794 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 648 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PRINTS PR01183 Ribonucleotide reductase large chain signature 691 714 5.3E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Gene3D G3DSA:3.20.70.20 767 812 1.4E-84 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Gene3D G3DSA:3.20.70.20 873 914 1.4E-84 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Gene3D G3DSA:3.20.70.20 549 711 1.4E-84 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Gene3D G3DSA:3.20.70.20 290 494 1.4E-84 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 SUPERFAMILY SSF48168 160 371 1.09E-61 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Pfam PF03477 ATP cone domain 41 137 9.3E-17 T 22-04-2016 IPR005144 ATP-cone domain RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 SUPERFAMILY SSF51998 372 816 7.94E-180 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 SUPERFAMILY SSF51998 847 915 7.94E-180 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 299 915 1.0E-210 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 756 778 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PANTHER PTHR11573 157 941 0.0 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 PANTHER PTHR11573 969 994 0.0 T 22-04-2016 RPIC_RS15010 5e445e4b3f4b38fc9f97bc906aa84cbd 994 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 296 369 6.5E-22 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 RPIC_RS13460 a562e533612274ace9d778762b6fdf14 148 Pfam PF00692 dUTPase 15 146 1.2E-36 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 RPIC_RS13460 a562e533612274ace9d778762b6fdf14 148 PANTHER PTHR11241 4 147 1.5E-46 T 22-04-2016 RPIC_RS13460 a562e533612274ace9d778762b6fdf14 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 147 33.215 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RPIC_RS13460 a562e533612274ace9d778762b6fdf14 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 147 2.1E-46 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 RPIC_RS13460 a562e533612274ace9d778762b6fdf14 148 SUPERFAMILY SSF51283 4 147 1.16E-50 T 22-04-2016 IPR029054 dUTPase-like RPIC_RS13460 a562e533612274ace9d778762b6fdf14 148 Gene3D G3DSA:2.70.40.10 5 147 3.6E-51 T 22-04-2016 IPR029054 dUTPase-like RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 Gene3D G3DSA:3.30.450.20 422 544 1.5E-8 T 22-04-2016 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 SUPERFAMILY SSF55874 608 771 1.28E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 SUPERFAMILY SSF47384 542 617 9.81E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 SUPERFAMILY SSF55785 421 544 1.34E-8 T 22-04-2016 IPR000014 PAS domain RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 Pfam PF05226 CHASE2 domain 30 315 7.4E-55 T 22-04-2016 IPR007890 CHASE2 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 715 725 2.81E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 769 2.81E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 711 2.81E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 732 750 2.81E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 Gene3D G3DSA:3.30.565.10 617 773 5.8E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 SMART SM00387 660 772 4.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 Pfam PF08448 PAS fold 434 547 2.1E-12 T 22-04-2016 IPR013656 PAS fold-4 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 661 771 4.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PIRSF PIRSF037347 6 775 9.5E-188 T 22-04-2016 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 SMART SM01080 42 320 2.4E-79 T 22-04-2016 IPR007890 CHASE2 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PANTHER PTHR24423 426 771 2.1E-64 T 22-04-2016 RPIC_RS04645 838b55157d8ea45accff39a26edbb560 777 PANTHER PTHR24423 1 19 2.1E-64 T 22-04-2016 RPIC_RS16275 855c0ddd778a3d8a5f09a91ab12f8d96 206 PANTHER PTHR10746 7 205 2.1E-70 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RPIC_RS16275 855c0ddd778a3d8a5f09a91ab12f8d96 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 203 3.5E-68 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RPIC_RS16275 855c0ddd778a3d8a5f09a91ab12f8d96 206 Gene3D G3DSA:3.40.1370.10 58 205 1.9E-51 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RPIC_RS16275 855c0ddd778a3d8a5f09a91ab12f8d96 206 SUPERFAMILY SSF52166 1 205 2.88E-66 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RPIC_RS16275 855c0ddd778a3d8a5f09a91ab12f8d96 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.802 T 22-04-2016 IPR013005 50S ribosomal protein uL4 RPIC_RS16275 855c0ddd778a3d8a5f09a91ab12f8d96 206 Pfam PF00573 Ribosomal protein L4/L1 family 18 203 3.9E-60 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RPIC_RS11955 4ad33f31e8cb899b57da3e7f1914e990 268 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 10 263 37.198 T 22-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RPIC_RS11955 4ad33f31e8cb899b57da3e7f1914e990 268 PANTHER PTHR36445 5 264 1.3E-71 T 22-04-2016 RPIC_RS11955 4ad33f31e8cb899b57da3e7f1914e990 268 Gene3D G3DSA:3.10.270.10 9 262 1.9E-106 T 22-04-2016 RPIC_RS11955 4ad33f31e8cb899b57da3e7f1914e990 268 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 258 2.2E-91 T 22-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 RPIC_RS11955 4ad33f31e8cb899b57da3e7f1914e990 268 PANTHER PTHR36445:SF1 5 264 1.3E-71 T 22-04-2016 RPIC_RS03485 292ed6218185dbba8892ab7de50a870a 68 Pfam PF11278 Protein of unknown function (DUF3079) 1 51 1.8E-34 T 22-04-2016 IPR021430 Protein of unknown function DUF3079 RPIC_RS13350 b8422346fc43fd8d5c4dae70ea566102 327 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 20 302 38.493 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RPIC_RS13350 b8422346fc43fd8d5c4dae70ea566102 327 PANTHER PTHR30426 20 326 9.0E-152 T 22-04-2016 RPIC_RS13350 b8422346fc43fd8d5c4dae70ea566102 327 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 22 300 6.5E-101 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RPIC_RS13350 b8422346fc43fd8d5c4dae70ea566102 327 Pfam PF02401 LytB protein 22 298 5.4E-93 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 RPIC_RS01110 145744296b8f3b1a22c470eafcab2ec2 201 SUPERFAMILY SSF52833 42 199 2.16E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01110 145744296b8f3b1a22c470eafcab2ec2 201 PANTHER PTHR12151 43 201 4.0E-60 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RPIC_RS01110 145744296b8f3b1a22c470eafcab2ec2 201 Pfam PF02630 SCO1/SenC 20 178 1.1E-39 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC RPIC_RS01110 145744296b8f3b1a22c470eafcab2ec2 201 Gene3D G3DSA:3.40.30.10 14 201 4.6E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 Gene3D G3DSA:3.30.300.30 329 433 9.8E-32 T 22-04-2016 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 PANTHER PTHR24095:SF175 62 353 8.4E-179 T 22-04-2016 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 PIRSF PIRSF006444 3 434 9.8E-202 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 Pfam PF14535 AMP-binding enzyme C-terminal domain 339 432 5.9E-22 T 22-04-2016 IPR028154 AMP-dependent ligase, C-terminal RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 Gene3D G3DSA:3.40.50.980 88 253 7.4E-13 T 22-04-2016 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 14 432 2.7E-208 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 Pfam PF00501 AMP-binding enzyme 84 292 1.1E-16 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 SUPERFAMILY SSF56801 25 390 1.44E-63 T 22-04-2016 RPIC_RS15390 75a3507127ba4f76c850043dc5d084e3 434 PANTHER PTHR24095 62 353 8.4E-179 T 22-04-2016 RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 SUPERFAMILY SSF46785 1 112 2.56E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 Pfam PF03466 LysR substrate binding domain 89 294 6.3E-38 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 PANTHER PTHR30419:SF2 1 295 5.3E-85 T 22-04-2016 RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 PANTHER PTHR30419 1 295 5.3E-85 T 22-04-2016 RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 Gene3D G3DSA:1.10.10.10 3 89 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 SUPERFAMILY SSF53850 89 296 4.94E-44 T 22-04-2016 RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 Gene3D G3DSA:3.40.190.10 91 176 2.7E-19 T 22-04-2016 RPIC_RS06840 d2d2ff80605b3eccd650a5ca71bfeee1 299 Gene3D G3DSA:3.40.190.10 177 264 6.0E-20 T 22-04-2016 RPIC_RS05305 859a0185cf79f006567be8ed3dba56b4 66 PANTHER PTHR38602:SF1 1 66 2.2E-12 T 22-04-2016 RPIC_RS05305 859a0185cf79f006567be8ed3dba56b4 66 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 9 63 4.0E-23 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 RPIC_RS05305 859a0185cf79f006567be8ed3dba56b4 66 PANTHER PTHR38602 1 66 2.2E-12 T 22-04-2016 RPIC_RS14060 74a4af7576c8b8aa83ca974102fbb891 299 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 6 128 8.3E-29 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI RPIC_RS14060 74a4af7576c8b8aa83ca974102fbb891 299 SUPERFAMILY SSF48452 161 286 1.92E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS14060 74a4af7576c8b8aa83ca974102fbb891 299 SMART SM00028 241 274 93.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS14060 74a4af7576c8b8aa83ca974102fbb891 299 SMART SM00028 170 203 0.021 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS14060 74a4af7576c8b8aa83ca974102fbb891 299 Gene3D G3DSA:1.25.40.10 208 290 1.6E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS14060 74a4af7576c8b8aa83ca974102fbb891 299 Gene3D G3DSA:1.25.40.10 165 207 7.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 Gene3D G3DSA:3.90.190.20 356 501 4.2E-55 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 PANTHER PTHR23135:SF4 17 510 2.6E-169 T 22-04-2016 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 SUPERFAMILY SSF53623 117 351 1.7E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 14 507 34.487 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 Pfam PF08245 Mur ligase middle domain 123 331 1.6E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 32 507 3.0E-149 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 Gene3D G3DSA:3.40.1190.10 116 355 5.4E-85 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 SUPERFAMILY SSF53244 352 508 8.85E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 PANTHER PTHR23135 17 510 2.6E-169 T 22-04-2016 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 Pfam PF02875 Mur ligase family, glutamate ligase domain 352 439 6.5E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 SUPERFAMILY SSF63418 28 111 4.32E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15250 e7857a44c06373e2d92074e10eaf8b57 514 Gene3D G3DSA:3.40.1390.10 28 111 1.1E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 Gene3D G3DSA:1.10.3210.10 36 227 2.5E-83 T 22-04-2016 IPR006674 HD domain RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 Gene3D G3DSA:1.10.3210.10 284 384 2.5E-83 T 22-04-2016 IPR006674 HD domain RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 41 173 3.2E-58 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 PANTHER PTHR11373 18 388 4.6E-83 T 22-04-2016 RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 SUPERFAMILY SSF109604 29 383 3.14E-94 T 22-04-2016 RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 Pfam PF01966 HD domain 78 208 3.4E-15 T 22-04-2016 IPR006674 HD domain RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 PANTHER PTHR11373:SF25 18 388 4.6E-83 T 22-04-2016 RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 Pfam PF13286 Phosphohydrolase-associated domain 294 381 3.0E-29 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 SMART SM00471 74 218 3.9E-10 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS16025 7998a82c8b8b5184dafa37945eac7f3f 388 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 18 383 39.047 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 Gene3D G3DSA:1.10.1370.10 521 700 8.8E-135 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 Gene3D G3DSA:1.10.1370.10 152 366 8.8E-135 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 Gene3D G3DSA:3.40.390.10 377 520 1.6E-56 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 Gene3D G3DSA:1.20.1050.40 22 149 1.6E-19 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 Pfam PF01432 Peptidase family M3 235 696 6.2E-143 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 SUPERFAMILY SSF55486 13 698 6.14E-194 T 22-04-2016 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 PANTHER PTHR11804 1 704 4.2E-277 T 22-04-2016 RPIC_RS09585 ab4abc8ec104aa7d084dbe21b1db056d 704 PANTHER PTHR11804:SF8 1 704 4.2E-277 T 22-04-2016 RPIC_RS06005 01af2cbdf08da18a84a2c1c54ef99aa9 725 Hamap MF_01906 D-(-)-3-hydroxybutyrate oligomer hydrolase. 3 725 34.152 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC_RS06005 01af2cbdf08da18a84a2c1c54ef99aa9 725 PIRSF PIRSF011409 1 725 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC_RS06005 01af2cbdf08da18a84a2c1c54ef99aa9 725 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 31 724 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC_RS06005 01af2cbdf08da18a84a2c1c54ef99aa9 725 Gene3D G3DSA:3.40.50.1820 578 635 6.1E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06005 01af2cbdf08da18a84a2c1c54ef99aa9 725 Gene3D G3DSA:3.40.50.1820 444 445 6.1E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06005 01af2cbdf08da18a84a2c1c54ef99aa9 725 Gene3D G3DSA:3.40.50.1820 310 352 6.1E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 SUPERFAMILY SSF51735 1 184 3.47E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 324 2.1E-47 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 Gene3D G3DSA:3.40.50.720 1 187 3.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PANTHER PTHR11728 1 335 5.5E-108 T 22-04-2016 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 Gene3D G3DSA:1.10.1040.10 188 330 2.7E-53 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 SUPERFAMILY SSF48179 183 335 1.33E-52 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PIRSF PIRSF000114 1 336 7.7E-94 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 163 7.2E-35 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 4.1E-38 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 4.1E-38 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 4.1E-38 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 4.1E-38 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 4.1E-38 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS01035 d4dcedd3ad0e5a9768f3017f7757ae03 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 326 34.449 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 RPIC_RS04310 78c9304ee483cb37e061726d9290011c 694 PIRSF PIRSF015380 1 694 1.7E-272 T 22-04-2016 IPR011385 Site-specific recombinase Gcr RPIC_RS04310 78c9304ee483cb37e061726d9290011c 694 Pfam PF10136 Site-specific recombinase 37 679 2.0E-232 T 22-04-2016 IPR011385 Site-specific recombinase Gcr RPIC_RS18070 1ac039367e6210f630687d31a5cc281f 275 Gene3D G3DSA:3.20.20.70 12 273 4.7E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS18070 1ac039367e6210f630687d31a5cc281f 275 SUPERFAMILY SSF110399 11 253 1.06E-81 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RPIC_RS18070 1ac039367e6210f630687d31a5cc281f 275 Hamap MF_00443 Thiazole synthase [thiG]. 12 267 41.759 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 RPIC_RS18070 1ac039367e6210f630687d31a5cc281f 275 Pfam PF05690 Thiazole biosynthesis protein ThiG 15 261 1.5E-108 T 22-04-2016 RPIC_RS18070 1ac039367e6210f630687d31a5cc281f 275 PANTHER PTHR34266 7 272 2.8E-133 T 22-04-2016 RPIC_RS16505 8406b11070b77874cc76250565bcfb75 578 SUPERFAMILY SSF53850 68 519 3.84E-63 T 22-04-2016 RPIC_RS16505 8406b11070b77874cc76250565bcfb75 578 Gene3D G3DSA:3.40.190.10 204 446 2.2E-41 T 22-04-2016 RPIC_RS16505 8406b11070b77874cc76250565bcfb75 578 PANTHER PTHR30061 89 539 9.6E-22 T 22-04-2016 RPIC_RS16505 8406b11070b77874cc76250565bcfb75 578 PIRSF PIRSF035859 1 577 5.6E-298 T 22-04-2016 IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 RPIC_RS16505 8406b11070b77874cc76250565bcfb75 578 Pfam PF01547 Bacterial extracellular solute-binding protein 89 426 1.6E-11 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 RPIC_RS16505 8406b11070b77874cc76250565bcfb75 578 Gene3D G3DSA:3.40.190.10 87 203 1.5E-15 T 22-04-2016 RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 SUPERFAMILY SSF47616 86 209 1.1E-31 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 PANTHER PTHR11260 1 211 1.1E-63 T 22-04-2016 RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 198 7.0E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 PANTHER PTHR11260:SF157 1 211 1.1E-63 T 22-04-2016 RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 85 1.7E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 Gene3D G3DSA:1.20.1050.10 95 208 9.1E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 Gene3D G3DSA:3.40.30.10 2 94 1.7E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS04150 017e131b588eb8ab5cf357388203881a 213 SUPERFAMILY SSF52833 1 91 7.78E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08330 49aa8d21b844177b44fa7bd253148acb 207 PANTHER PTHR34478:SF2 1 198 1.0E-93 T 22-04-2016 RPIC_RS08330 49aa8d21b844177b44fa7bd253148acb 207 Pfam PF04011 LemA family 8 195 5.5E-67 T 22-04-2016 IPR007156 LemA RPIC_RS08330 49aa8d21b844177b44fa7bd253148acb 207 SUPERFAMILY SSF140478 26 181 6.02E-54 T 22-04-2016 IPR023353 LemA-like domain RPIC_RS08330 49aa8d21b844177b44fa7bd253148acb 207 PANTHER PTHR34478 1 198 1.0E-93 T 22-04-2016 RPIC_RS08330 49aa8d21b844177b44fa7bd253148acb 207 Gene3D G3DSA:1.20.1440.20 15 195 8.0E-65 T 22-04-2016 IPR023353 LemA-like domain RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PIRSF PIRSF004749 1 171 1.1E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 Hamap MF_00163 Peptide deformylase [def]. 2 163 29.919 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 5.9E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 Pfam PF01327 Polypeptide deformylase 4 152 7.5E-50 T 22-04-2016 IPR023635 Peptide deformylase RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PANTHER PTHR10458:SF10 1 168 9.2E-87 T 22-04-2016 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PRINTS PR01576 Peptide deformylase signature 90 101 3.0E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PRINTS PR01576 Peptide deformylase signature 121 150 3.0E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PRINTS PR01576 Peptide deformylase signature 33 62 3.0E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PRINTS PR01576 Peptide deformylase signature 102 120 3.0E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 Gene3D G3DSA:3.90.45.10 5 165 1.4E-64 T 22-04-2016 IPR023635 Peptide deformylase RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 PANTHER PTHR10458 1 168 9.2E-87 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 RPIC_RS18250 92c29686c37269057586b1e9256dee3b 171 SUPERFAMILY SSF56420 2 165 2.22E-61 T 22-04-2016 IPR023635 Peptide deformylase RPIC_RS02375 0ca3aa058aba4e86150300660da94f2b 358 PANTHER PTHR10794 22 356 1.7E-52 T 22-04-2016 RPIC_RS02375 0ca3aa058aba4e86150300660da94f2b 358 Pfam PF00561 alpha/beta hydrolase fold 82 324 2.2E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS02375 0ca3aa058aba4e86150300660da94f2b 358 SUPERFAMILY SSF53474 49 343 2.68E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02375 0ca3aa058aba4e86150300660da94f2b 358 PIRSF PIRSF005211 5 357 1.1E-108 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- RPIC_RS02375 0ca3aa058aba4e86150300660da94f2b 358 Gene3D G3DSA:3.40.50.1820 271 347 1.4E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02375 0ca3aa058aba4e86150300660da94f2b 358 Gene3D G3DSA:3.40.50.1820 62 197 1.4E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 Pfam PF00753 Metallo-beta-lactamase superfamily 9 217 5.2E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 SUPERFAMILY SSF56281 8 316 7.34E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 SMART SM00849 9 228 5.0E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 PANTHER PTHR11935:SF109 118 248 2.5E-36 T 22-04-2016 RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 PANTHER PTHR11935:SF109 1 93 2.5E-36 T 22-04-2016 RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 Gene3D G3DSA:3.60.15.10 2 243 9.3E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 PANTHER PTHR11935 118 248 2.5E-36 T 22-04-2016 RPIC_RS12975 d1b06d263878f12b913685a009bb2e6f 317 PANTHER PTHR11935 1 93 2.5E-36 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Pfam PF00072 Response regulator receiver domain 1884 1995 1.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:2.30.30.40 1797 1839 4.5E-20 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:2.30.30.40 1710 1731 4.5E-20 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PANTHER PTHR22617:SF20 4 16 1.6E-103 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PANTHER PTHR22617:SF20 1221 1436 1.6E-103 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PANTHER PTHR22617:SF20 1502 1858 1.6E-103 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1573 1709 1.4E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1654 1664 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1694 1707 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1614 1628 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1670 1688 8.8E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM00073 757 864 7.8E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM00073 1225 1325 0.0096 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM00073 1033 1130 0.027 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF47226 756 891 1.57E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PANTHER PTHR22617 4 16 1.6E-103 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PANTHER PTHR22617 1221 1436 1.6E-103 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 PANTHER PTHR22617 1502 1858 1.6E-103 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Pfam PF01584 CheW-like domain 1714 1843 1.5E-16 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM00387 1569 1710 3.7E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF47226 1225 1335 6.28E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:1.20.120.160 1020 1138 6.6E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:1.20.120.160 1206 1321 1.5E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF47226 1036 1152 3.53E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:3.40.50.2300 1881 2003 1.1E-34 T 22-04-2016 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF50341 1709 1839 1.83E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF55874 1526 1708 2.33E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM00260 1702 1842 7.6E-10 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:3.30.565.10 1525 1709 3.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:1.20.120.160 86 172 6.6E-6 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:1.20.120.160 756 916 1.2E-26 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Pfam PF01627 Hpt domain 1228 1325 1.0E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Pfam PF01627 Hpt domain 759 858 2.0E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Pfam PF01627 Hpt domain 1037 1127 2.6E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF47226 59 169 8.83E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM00448 1882 1995 2.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SMART SM01231 1387 1524 3.0E-6 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 Gene3D G3DSA:1.10.287.560 1389 1442 7.4E-5 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 RPIC_RS03000 336081b92e7d8cbc92e059dcb95ca50c 2009 SUPERFAMILY SSF52172 1884 2002 2.85E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 SUPERFAMILY SSF50193 1 122 2.62E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.5E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 PANTHER PTHR11761:SF3 1 122 8.9E-73 T 22-04-2016 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 SMART SM01374 1 122 9.2E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.826 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 PANTHER PTHR11761 1 122 8.9E-73 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.2E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC_RS16230 92edb8bdc7fffcdaa4d6d657f101e6a9 122 Gene3D G3DSA:2.40.150.20 1 122 2.8E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RPIC_RS12720 0abe235c1b58d1a007363a21567ede7a 387 Gene3D G3DSA:1.20.950.20 154 372 2.7E-63 T 22-04-2016 RPIC_RS12720 0abe235c1b58d1a007363a21567ede7a 387 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 157 363 3.8E-49 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 RPIC_RS12720 0abe235c1b58d1a007363a21567ede7a 387 SUPERFAMILY SSF81342 154 371 3.69E-44 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS12720 0abe235c1b58d1a007363a21567ede7a 387 PANTHER PTHR30074:SF2 67 383 1.3E-78 T 22-04-2016 RPIC_RS12720 0abe235c1b58d1a007363a21567ede7a 387 PANTHER PTHR30074 67 383 1.3E-78 T 22-04-2016 RPIC_RS12720 0abe235c1b58d1a007363a21567ede7a 387 Pfam PF01292 Prokaryotic cytochrome b561 160 341 1.5E-15 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Gene3D G3DSA:3.50.50.60 369 426 9.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Gene3D G3DSA:3.50.50.60 200 281 9.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Gene3D G3DSA:3.50.50.60 139 141 9.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Gene3D G3DSA:3.50.50.60 14 69 9.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Gene3D G3DSA:3.30.9.10 282 322 1.8E-4 T 22-04-2016 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Gene3D G3DSA:3.30.9.10 145 199 1.8E-4 T 22-04-2016 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 SUPERFAMILY SSF54373 284 369 1.31E-14 T 22-04-2016 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 Pfam PF01266 FAD dependent oxidoreductase 15 408 6.7E-56 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 PANTHER PTHR13847 118 427 1.8E-54 T 22-04-2016 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 PANTHER PTHR13847 11 71 1.8E-54 T 22-04-2016 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 SUPERFAMILY SSF51905 369 426 2.33E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 SUPERFAMILY SSF51905 118 282 2.33E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 SUPERFAMILY SSF51905 15 65 2.33E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 PANTHER PTHR13847:SF216 118 427 1.8E-54 T 22-04-2016 RPIC_RS01880 33a4177c3762801719c4c2b95014be8c 427 PANTHER PTHR13847:SF216 11 71 1.8E-54 T 22-04-2016 RPIC_RS17170 149e9c8b038b69b3db284a6929d3c4cf 218 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 3.1E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS17170 149e9c8b038b69b3db284a6929d3c4cf 218 PANTHER PTHR11935:SF115 1 215 1.7E-104 T 22-04-2016 RPIC_RS17170 149e9c8b038b69b3db284a6929d3c4cf 218 PANTHER PTHR11935 1 215 1.7E-104 T 22-04-2016 RPIC_RS17170 149e9c8b038b69b3db284a6929d3c4cf 218 SMART SM00849 12 191 9.0E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS17170 149e9c8b038b69b3db284a6929d3c4cf 218 SUPERFAMILY SSF56281 6 207 6.58E-55 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS17170 149e9c8b038b69b3db284a6929d3c4cf 218 Gene3D G3DSA:3.60.15.10 6 202 4.9E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS01920 9620eda05835e7fc6001010b942d840e 813 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 66 780 20.397 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 RPIC_RS01920 9620eda05835e7fc6001010b942d840e 813 Gene3D G3DSA:2.60.450.10 98 246 4.0E-14 T 22-04-2016 RPIC_RS01920 9620eda05835e7fc6001010b942d840e 813 Pfam PF04453 Organic solvent tolerance protein 343 719 1.1E-103 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 RPIC_RS01920 9620eda05835e7fc6001010b942d840e 813 Pfam PF03968 OstA-like protein 137 238 1.4E-4 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RPIC_RS01920 9620eda05835e7fc6001010b942d840e 813 PANTHER PTHR30189 104 775 4.2E-68 T 22-04-2016 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 295 39.423 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 PANTHER PTHR30448 1 106 6.7E-115 T 22-04-2016 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 PANTHER PTHR30448 125 296 6.7E-115 T 22-04-2016 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 Gene3D G3DSA:3.40.50.300 1 168 9.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 PANTHER PTHR30448:SF0 1 106 6.7E-115 T 22-04-2016 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 PANTHER PTHR30448:SF0 125 296 6.7E-115 T 22-04-2016 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 SUPERFAMILY SSF52540 1 169 1.24E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 PIRSF PIRSF005052 1 296 4.4E-113 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RPIC_RS01260 0370db08ead3449975b2d3685e65138a 297 Pfam PF03668 P-loop ATPase protein family 1 293 4.9E-92 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 PANTHER PTHR18968 1 568 1.1E-245 T 22-04-2016 RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 403 553 2.3E-40 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 PANTHER PTHR18968:SF120 1 568 1.1E-245 T 22-04-2016 RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 SUPERFAMILY SSF52467 169 370 2.45E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 Gene3D G3DSA:3.40.50.970 374 561 1.6E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 Gene3D G3DSA:3.40.50.1220 201 348 5.7E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 443 462 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 SUPERFAMILY SSF52518 16 191 1.52E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 Gene3D G3DSA:3.40.50.970 16 189 1.8E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 181 4.8E-54 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 SUPERFAMILY SSF52518 380 562 8.29E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS06100 93138d8dc424de30923cc62ffb518a2b 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 345 5.3E-27 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 SUPERFAMILY SSF46689 289 338 1.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 Gene3D G3DSA:1.10.10.60 288 339 4.6E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 PANTHER PTHR11019 235 342 1.1E-31 T 22-04-2016 RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 SMART SM00342 253 336 2.8E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 34 211 1.3E-26 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 Pfam PF12833 Helix-turn-helix domain 261 338 3.8E-14 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS12970 5840a9edb22344b6107be011c4f3620c 342 PANTHER PTHR11019:SF52 235 342 1.1E-31 T 22-04-2016 RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 PANTHER PTHR30012:SF0 32 424 1.4E-153 T 22-04-2016 RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 PANTHER PTHR30012 32 424 1.4E-153 T 22-04-2016 RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 PRINTS PR00812 Bacterial general secretion pathway protein F signature 405 424 8.3E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 PRINTS PR00812 Bacterial general secretion pathway protein F signature 389 403 8.3E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 PRINTS PR00812 Bacterial general secretion pathway protein F signature 185 213 8.3E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 PRINTS PR00812 Bacterial general secretion pathway protein F signature 86 98 8.3E-17 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 Pfam PF00482 Type II secretion system (T2SS), protein F 90 213 1.9E-34 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 Pfam PF00482 Type II secretion system (T2SS), protein F 294 416 4.5E-28 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS15135 db7c3e7f7d2878b81aed99742900be62 424 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 185 213 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 SUPERFAMILY SSF46785 6 85 1.77E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 Gene3D G3DSA:3.40.190.10 276 308 6.6E-32 T 22-04-2016 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 Gene3D G3DSA:3.40.190.10 91 174 6.6E-32 T 22-04-2016 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 PANTHER PTHR30118:SF8 1 310 3.2E-75 T 22-04-2016 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 Pfam PF03466 LysR substrate binding domain 96 301 2.6E-22 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 PANTHER PTHR30118 1 310 3.2E-75 T 22-04-2016 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 Gene3D G3DSA:1.10.10.10 5 87 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 Gene3D G3DSA:3.40.190.10 175 272 6.9E-26 T 22-04-2016 RPIC_RS11045 fe31c18eeb692bec21173108cedb85a6 315 SUPERFAMILY SSF53850 91 300 1.38E-40 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 Gene3D G3DSA:3.50.50.60 2 116 1.7E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 Gene3D G3DSA:3.50.50.60 234 315 1.5E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 Gene3D G3DSA:3.50.50.60 117 233 1.2E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PANTHER PTHR22912:SF48 1 318 1.4E-152 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 302 1.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 314 2.8E-118 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.5E-39 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.5E-39 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.5E-39 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 2.5E-39 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.5E-39 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 SUPERFAMILY SSF51905 1 314 1.56E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PANTHER PTHR22912 1 318 1.4E-152 T 22-04-2016 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS12590 f923a6b96ed5ac765403dd6fe5c636d6 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 6.0E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 SUPERFAMILY SSF46785 3 85 1.98E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 Gene3D G3DSA:1.10.10.10 6 87 3.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 9.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 9.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 9.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 PANTHER PTHR30126 6 307 9.9E-50 T 22-04-2016 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 SUPERFAMILY SSF53850 94 301 1.09E-28 T 22-04-2016 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 Pfam PF03466 LysR substrate binding domain 94 295 9.2E-28 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 Gene3D G3DSA:3.40.190.10 178 266 1.4E-17 T 22-04-2016 RPIC_RS00250 bab393a79697b1b7f8a242ea21feda5a 307 Gene3D G3DSA:3.40.190.10 103 177 2.2E-8 T 22-04-2016 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.7E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 162 174 1.7E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 1.7E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 1.7E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 1.7E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 SUPERFAMILY SSF53182 1 215 2.62E-73 T 22-04-2016 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 Pfam PF01470 Pyroglutamyl peptidase 4 202 1.0E-84 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PANTHER PTHR23402 1 214 1.4E-70 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 215 8.2E-92 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PIRSF PIRSF015592 1 213 3.6E-85 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 PANTHER PTHR23402:SF1 1 214 1.4E-70 T 22-04-2016 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 201 41.12 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RPIC_RS11665 7145846df0b356dfa60804fa5be07aa7 215 Gene3D G3DSA:3.40.630.20 2 212 1.0E-69 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RPIC_RS24400 847df57a01bbaae5f8880579a116dbf9 309 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 1 308 6.0E-125 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 PANTHER PTHR13748:SF4 1 337 2.5E-189 T 22-04-2016 RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 PANTHER PTHR13748:SF4 358 398 2.5E-189 T 22-04-2016 RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 214 2.3E-58 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 PANTHER PTHR13748 1 337 2.5E-189 T 22-04-2016 RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 PANTHER PTHR13748 358 398 2.5E-189 T 22-04-2016 RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 SMART SM00833 260 384 8.3E-54 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 Gene3D G3DSA:3.40.50.300 3 233 9.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 SUPERFAMILY SSF52540 3 303 1.06E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 Gene3D G3DSA:3.30.1220.10 248 384 2.4E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18380 2b7b1e66c3db4771bdf7af027483be33 435 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 384 8.5E-30 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 Gene3D G3DSA:3.90.79.10 7 111 1.0E-19 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 Pfam PF00293 NUDIX domain 6 112 1.3E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 SUPERFAMILY SSF55811 10 111 3.25E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 PRINTS PR00502 NUDIX hydrolase family signature 29 43 1.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 PRINTS PR00502 NUDIX hydrolase family signature 43 58 1.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS18615 51e6c11d752541c8102e81a784abe2f4 132 PANTHER PTHR22769 10 118 1.9E-16 T 22-04-2016 RPIC_RS17680 645a84a5a909486e40c1d492c2c70687 285 SUPERFAMILY SSF53335 9 281 2.16E-95 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS17680 645a84a5a909486e40c1d492c2c70687 285 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 272 40.788 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RPIC_RS17680 645a84a5a909486e40c1d492c2c70687 285 Gene3D G3DSA:3.40.50.150 1 281 9.5E-119 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS17680 645a84a5a909486e40c1d492c2c70687 285 PANTHER PTHR37426 2 283 5.5E-110 T 22-04-2016 RPIC_RS17680 645a84a5a909486e40c1d492c2c70687 285 PANTHER PTHR37426:SF1 2 283 5.5E-110 T 22-04-2016 RPIC_RS17680 645a84a5a909486e40c1d492c2c70687 285 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 276 2.6E-72 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 RPIC_RS06960 50296e24e0e47527c6f9952b908a7e7c 403 PANTHER PTHR23501 18 389 7.7E-106 T 22-04-2016 RPIC_RS06960 50296e24e0e47527c6f9952b908a7e7c 403 Pfam PF07690 Major Facilitator Superfamily 26 356 1.1E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06960 50296e24e0e47527c6f9952b908a7e7c 403 Gene3D G3DSA:1.20.1250.20 214 392 1.8E-13 T 22-04-2016 RPIC_RS06960 50296e24e0e47527c6f9952b908a7e7c 403 Gene3D G3DSA:1.20.1250.20 22 196 1.6E-23 T 22-04-2016 RPIC_RS06960 50296e24e0e47527c6f9952b908a7e7c 403 SUPERFAMILY SSF103473 14 393 1.57E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06960 50296e24e0e47527c6f9952b908a7e7c 403 PANTHER PTHR23501:SF28 18 389 7.7E-106 T 22-04-2016 RPIC_RS10850 447048dbb4e8a1a770305777f6f7cac9 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 18 349 24.793 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RPIC_RS10850 447048dbb4e8a1a770305777f6f7cac9 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 230 243 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 RPIC_RS10850 447048dbb4e8a1a770305777f6f7cac9 354 PANTHER PTHR11432 1 354 6.9E-166 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RPIC_RS10850 447048dbb4e8a1a770305777f6f7cac9 354 PANTHER PTHR11432:SF3 1 354 6.9E-166 T 22-04-2016 RPIC_RS10850 447048dbb4e8a1a770305777f6f7cac9 354 Pfam PF00146 NADH dehydrogenase 26 342 3.3E-126 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 PANTHER PTHR10173:SF18 3 126 2.7E-68 T 22-04-2016 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 PANTHER PTHR10173 3 126 2.7E-68 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 6 128 36.938 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 Pfam PF01641 SelR domain 9 126 4.9E-56 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 126 9.5E-61 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 Gene3D G3DSA:2.170.150.20 2 126 1.5E-64 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 RPIC_RS07215 04a8bee00f300d4683aed7b721b7c8c5 128 SUPERFAMILY SSF51316 3 126 7.32E-61 T 22-04-2016 IPR011057 Mss4-like RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 SUPERFAMILY SSF54862 37 146 3.52E-26 T 22-04-2016 RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 PANTHER PTHR10849 4 163 4.9E-87 T 22-04-2016 RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 PANTHER PTHR10849:SF20 4 163 4.9E-87 T 22-04-2016 RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 28.173 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 Gene3D G3DSA:1.10.1060.10 18 129 2.0E-22 T 22-04-2016 RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 Pfam PF12838 4Fe-4S dicluster domain 63 117 1.2E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS10845 aa970d83b5ab19cb090aca201b480397 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 141 4.7E-46 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 PANTHER PTHR11353 3 536 1.7E-251 T 22-04-2016 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 Gene3D G3DSA:1.10.560.10 370 518 1.7E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 SUPERFAMILY SSF52029 184 376 1.52E-80 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 PRINTS PR00298 60kDa chaperonin signature 398 419 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 PRINTS PR00298 60kDa chaperonin signature 83 110 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 PRINTS PR00298 60kDa chaperonin signature 350 375 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 PRINTS PR00298 60kDa chaperonin signature 27 53 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 PRINTS PR00298 60kDa chaperonin signature 268 291 3.3E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 Hamap MF_00600 60 kDa chaperonin [groL]. 2 538 40.946 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 SUPERFAMILY SSF48592 406 521 1.45E-78 T 22-04-2016 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 SUPERFAMILY SSF48592 7 134 1.45E-78 T 22-04-2016 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 Gene3D G3DSA:1.10.560.10 3 196 2.4E-49 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 SUPERFAMILY SSF54849 137 204 1.81E-25 T 22-04-2016 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.4E-254 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 2.9E-100 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RPIC_RS16970 a5b73cbb79660f88531a665d2b5be38c 540 Gene3D G3DSA:3.50.7.10 197 369 4.7E-91 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC_RS07805 0d2a2b864b72ee309f08a4d20804e9cc 214 Pfam PF08721 TnsA endonuclease C terminal 126 201 2.1E-15 T 22-04-2016 IPR014832 TnsA endonuclease C-terminal RPIC_RS07805 0d2a2b864b72ee309f08a4d20804e9cc 214 Pfam PF08722 TnsA endonuclease N terminal 44 124 5.3E-14 T 22-04-2016 IPR014833 TnsA endonuclease, N-terminal RPIC_RS07575 de4ba05f098a51fe2a578cbbcb996832 158 PANTHER PTHR11407 4 119 1.2E-19 T 22-04-2016 RPIC_RS07575 de4ba05f098a51fe2a578cbbcb996832 158 Pfam PF01464 Transglycosylase SLT domain 35 132 3.7E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS07575 de4ba05f098a51fe2a578cbbcb996832 158 SUPERFAMILY SSF53955 23 152 5.36E-43 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS07575 de4ba05f098a51fe2a578cbbcb996832 158 PANTHER PTHR11407:SF34 4 119 1.2E-19 T 22-04-2016 RPIC_RS07575 de4ba05f098a51fe2a578cbbcb996832 158 Gene3D G3DSA:1.10.530.10 33 137 3.9E-20 T 22-04-2016 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 SUPERFAMILY SSF53850 92 300 3.08E-40 T 22-04-2016 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 5.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 Gene3D G3DSA:1.10.10.10 6 88 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 Pfam PF03466 LysR substrate binding domain 90 295 1.0E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 SUPERFAMILY SSF46785 6 87 4.19E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 PANTHER PTHR30537 1 302 2.3E-149 T 22-04-2016 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 Gene3D G3DSA:3.40.190.10 94 194 7.3E-25 T 22-04-2016 RPIC_RS07295 7a94689746da3098401f71c8c840b453 308 PANTHER PTHR30537:SF11 1 302 2.3E-149 T 22-04-2016 RPIC_RS09880 79deb739d5b24fc1b8233f4cdb229895 411 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 336 3.5E-50 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIC_RS09880 79deb739d5b24fc1b8233f4cdb229895 411 PANTHER PTHR22893:SF6 1 335 3.3E-148 T 22-04-2016 RPIC_RS09880 79deb739d5b24fc1b8233f4cdb229895 411 PANTHER PTHR22893 1 335 3.3E-148 T 22-04-2016 RPIC_RS09880 79deb739d5b24fc1b8233f4cdb229895 411 SUPERFAMILY SSF51395 2 344 1.44E-100 T 22-04-2016 RPIC_RS09880 79deb739d5b24fc1b8233f4cdb229895 411 Gene3D G3DSA:3.20.20.70 2 342 3.2E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 SUPERFAMILY SSF109998 258 441 3.14E-50 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 SUPERFAMILY SSF102735 3 130 8.11E-30 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 Hamap MF_00303 Trigger factor [tig]. 1 431 20.125 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 PANTHER PTHR30560 1 443 2.6E-107 T 22-04-2016 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 Gene3D G3DSA:3.30.70.1050 3 118 1.0E-29 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 PANTHER PTHR30560:SF3 1 443 2.6E-107 T 22-04-2016 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 PIRSF PIRSF003095 1 446 8.6E-129 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 Pfam PF05697 Bacterial trigger factor protein (TF) 3 142 4.8E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 SUPERFAMILY SSF54534 100 251 1.08E-29 T 22-04-2016 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 273 425 2.7E-39 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 167 247 1.6E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 TIGRFAM TIGR00115 tig: trigger factor 11 424 6.1E-126 T 22-04-2016 IPR005215 Trigger factor GO:0015031 RPIC_RS09175 51ec8ea093f6fbd542ce5f615d2558eb 447 Gene3D G3DSA:1.10.3120.10 214 402 5.6E-61 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 PANTHER PTHR11562 21 305 5.2E-89 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 Pfam PF16916 Dimerisation domain of Zinc Transporter 228 304 3.2E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 Gene3D G3DSA:3.30.70.1350 224 305 4.1E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 Gene3D G3DSA:1.20.1510.10 26 223 2.7E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 Pfam PF01545 Cation efflux family 30 223 1.2E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 SUPERFAMILY SSF160240 226 305 1.09E-20 T 22-04-2016 RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 PANTHER PTHR11562:SF18 21 305 5.2E-89 T 22-04-2016 RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 26 304 7.3E-67 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02805 1ec2c224ee1333e9e146566a5ddb5c37 308 SUPERFAMILY SSF161111 24 224 5.89E-54 T 22-04-2016 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 PANTHER PTHR11851:SF136 61 481 2.3E-104 T 22-04-2016 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 Gene3D G3DSA:3.30.830.10 286 472 3.4E-26 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 Pfam PF05193 Peptidase M16 inactive domain 226 408 8.5E-26 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 SUPERFAMILY SSF63411 286 476 6.7E-34 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 92 115 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 SUPERFAMILY SSF63411 60 270 9.35E-58 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 Pfam PF00675 Insulinase (Peptidase family M16) 74 217 1.1E-26 T 22-04-2016 IPR011765 Peptidase M16, N-terminal RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 Gene3D G3DSA:3.30.830.10 58 281 5.6E-54 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC_RS01175 44ac2dca1ce06917f5f6cd9a24765ccd 498 PANTHER PTHR11851 61 481 2.3E-104 T 22-04-2016 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 PANTHER PTHR30476:SF0 1 161 2.3E-73 T 22-04-2016 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 Gene3D G3DSA:3.30.70.990 9 94 1.7E-32 T 22-04-2016 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 7.2E-67 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 PANTHER PTHR30476 1 161 2.3E-73 T 22-04-2016 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.934 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 SUPERFAMILY SSF89963 89 161 3.14E-28 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 SUPERFAMILY SSF89963 2 87 5.75E-32 T 22-04-2016 IPR007551 Protein of unknown function DUF520 RPIC_RS13920 b946c9a8a21e9ff180c7023b47e92c8e 161 Gene3D G3DSA:3.30.70.860 95 161 2.0E-33 T 22-04-2016 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 SUPERFAMILY SSF51569 4 330 1.76E-142 T 22-04-2016 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 125 139 1.8E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PIRSF PIRSF001415 1 331 7.8E-146 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 Gene3D G3DSA:3.20.20.70 4 330 2.3E-148 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 SMART SM01004 5 329 6.9E-236 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 327 3.9E-138 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS16130 2f7ad56f2afd4886be413166a7b3a651 331 PANTHER PTHR11458 5 330 6.1E-178 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.3E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 SMART SM00862 149 225 5.3E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 SUPERFAMILY SSF46894 127 226 1.5E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 SUPERFAMILY SSF52172 1 133 1.61E-9 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 PANTHER PTHR26402:SF292 1 227 7.1E-29 T 22-04-2016 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 Gene3D G3DSA:3.40.50.2300 1 119 7.6E-10 T 22-04-2016 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 PANTHER PTHR26402 1 227 7.1E-29 T 22-04-2016 RPIC_RS04655 a702bace1e2d0d94d3fd37cd2f17b164 235 Gene3D G3DSA:1.10.10.10 129 226 7.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 PANTHER PTHR11014 11 395 4.8E-144 T 22-04-2016 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 Pfam PF01546 Peptidase family M20/M25/M40 76 387 8.0E-38 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 Gene3D G3DSA:3.30.70.360 192 288 2.1E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 Gene3D G3DSA:3.40.630.10 332 390 2.3E-63 T 22-04-2016 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 Gene3D G3DSA:3.40.630.10 10 191 2.3E-63 T 22-04-2016 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 109 146 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 15 386 2.2E-119 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 PANTHER PTHR11014:SF80 11 395 4.8E-144 T 22-04-2016 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 SUPERFAMILY SSF53187 10 182 3.55E-58 T 22-04-2016 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 SUPERFAMILY SSF53187 309 390 3.55E-58 T 22-04-2016 RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 SUPERFAMILY SSF55031 183 289 6.28E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS09345 67b3a71cdd95b36638706adb73524ab4 397 Pfam PF07687 Peptidase dimerisation domain 179 288 5.5E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS09295 be07f410e9fb183e6f50fd39b1bef2f0 394 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 23 1.4E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC_RS09295 be07f410e9fb183e6f50fd39b1bef2f0 394 PANTHER PTHR15535 226 339 1.1E-14 T 22-04-2016 RPIC_RS09295 be07f410e9fb183e6f50fd39b1bef2f0 394 Pfam PF07394 Protein of unknown function (DUF1501) 38 370 5.5E-40 T 22-04-2016 IPR010869 Protein of unknown function DUF1501 RPIC_RS09295 be07f410e9fb183e6f50fd39b1bef2f0 394 SUPERFAMILY SSF53649 267 381 4.58E-5 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS09295 be07f410e9fb183e6f50fd39b1bef2f0 394 PANTHER PTHR15535:SF21 226 339 1.1E-14 T 22-04-2016 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 198 1.1E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 4.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 4.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 4.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 Gene3D G3DSA:3.40.50.1000 88 229 4.1E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 SUPERFAMILY SSF56784 11 225 2.27E-56 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 14 224 1.7E-61 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 Gene3D G3DSA:1.10.150.240 27 87 1.6E-10 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 199 1.1E-34 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 116 193 9.8E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS15415 41b13d12f8ed9e0b262bb5730fce0b08 248 PANTHER PTHR18901 10 221 5.3E-49 T 22-04-2016 RPIC_RS03625 ed9dcb23c61519adcf7e27b373782e3d 332 Gene3D G3DSA:3.40.50.1820 43 331 4.0E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS03625 ed9dcb23c61519adcf7e27b373782e3d 332 PANTHER PTHR11440 49 162 4.7E-18 T 22-04-2016 RPIC_RS03625 ed9dcb23c61519adcf7e27b373782e3d 332 Pfam PF00561 alpha/beta hydrolase fold 52 171 6.8E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS03625 ed9dcb23c61519adcf7e27b373782e3d 332 SUPERFAMILY SSF53474 48 303 5.76E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 SUPERFAMILY SSF103473 12 200 3.79E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 SUPERFAMILY SSF103473 256 476 3.79E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 345 365 1.9E-12 T 22-04-2016 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 147 171 1.9E-12 T 22-04-2016 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 26 50 1.9E-12 T 22-04-2016 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 117 137 1.9E-12 T 22-04-2016 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 PANTHER PTHR23501 18 478 1.6E-102 T 22-04-2016 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 427 3.1E-78 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 Pfam PF07690 Major Facilitator Superfamily 28 417 8.8E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 Gene3D G3DSA:1.20.1250.20 17 198 5.8E-28 T 22-04-2016 RPIC_RS06150 4dbaa9f4945cb8522b775bec92b6bd26 485 Gene3D G3DSA:1.20.1250.20 265 475 2.2E-13 T 22-04-2016 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 Gene3D G3DSA:2.60.40.1070 141 232 1.6E-17 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PANTHER PTHR30251 1 238 1.6E-63 T 22-04-2016 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PRINTS PR00969 Pili chaperone signature 70 91 1.8E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PRINTS PR00969 Pili chaperone signature 25 34 1.8E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PRINTS PR00969 Pili chaperone signature 98 115 1.8E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PRINTS PR00969 Pili chaperone signature 121 136 1.8E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PRINTS PR00969 Pili chaperone signature 160 175 1.8E-29 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 229 6.7E-15 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 Gene3D G3DSA:2.60.40.360 24 139 1.9E-39 T 22-04-2016 IPR008962 PapD-like RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 SUPERFAMILY SSF49584 144 239 2.35E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 SUPERFAMILY SSF49354 19 139 8.9E-36 T 22-04-2016 IPR008962 PapD-like RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 PANTHER PTHR30251:SF2 1 238 1.6E-63 T 22-04-2016 RPIC_RS03735 d397199f4b8da3108c2fbb07ed62cc8b 248 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 139 9.8E-36 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 PANTHER PTHR13794:SF47 184 441 4.6E-280 T 22-04-2016 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 PANTHER PTHR13794:SF47 18 163 4.6E-280 T 22-04-2016 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 Gene3D G3DSA:3.20.20.120 130 163 1.8E-103 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 Gene3D G3DSA:3.20.20.120 195 408 1.8E-103 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 SMART SM00922 196 296 9.9E-18 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 51 148 2.4E-6 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 SUPERFAMILY SSF51604 150 425 3.54E-84 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 PANTHER PTHR13794 184 441 4.6E-280 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 PANTHER PTHR13794 18 163 4.6E-280 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 Gene3D G3DSA:3.30.390.10 20 129 2.8E-11 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 SUPERFAMILY SSF54826 18 148 7.07E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 Pfam PF13378 Enolase C-terminal domain-like 200 415 8.9E-35 T 22-04-2016 IPR029065 Enolase C-terminal domain-like RPIC_RS04670 96d0821706d9acf37696e449557d4b7e 456 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 17 456 1.2E-262 T 22-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 Gene3D G3DSA:3.40.50.150 234 441 2.2E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 Gene3D G3DSA:1.10.940.10 13 152 3.7E-21 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PANTHER PTHR22807:SF30 44 442 5.6E-74 T 22-04-2016 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 439 1.2E-50 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 SUPERFAMILY SSF48013 14 153 9.48E-20 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 424 441 2.1E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 253 263 2.1E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 2.1E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 2.1E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 2.1E-26 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 Gene3D G3DSA:3.30.70.1170 177 232 3.3E-21 T 22-04-2016 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 Gene3D G3DSA:1.10.287.730 153 176 1.0E-7 T 22-04-2016 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 SUPERFAMILY SSF53335 143 442 8.06E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 PANTHER PTHR22807 44 442 5.6E-74 T 22-04-2016 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 13 442 2.3E-92 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS18225 4726ac70900dfe93841098a70c365fe8 443 Pfam PF01029 NusB family 42 130 4.2E-6 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 42.832 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 PIRSF PIRSF001455 5 360 3.3E-109 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 Gene3D G3DSA:1.20.1090.10 173 354 1.7E-65 T 22-04-2016 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 Gene3D G3DSA:3.40.50.1970 3 172 8.6E-71 T 22-04-2016 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 PANTHER PTHR21090 1 354 2.5E-190 T 22-04-2016 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 SUPERFAMILY SSF56796 4 353 3.79E-118 T 22-04-2016 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 350 4.8E-123 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS16030 0a09b6071eb3a174aadfc189d4e5da72 368 Pfam PF01761 3-dehydroquinate synthase 67 324 2.2E-107 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 RPIC_RS05185 b42bf855d043685a90b0cb68b0c5dd66 263 PANTHER PTHR30151 37 263 1.3E-96 T 22-04-2016 RPIC_RS05185 b42bf855d043685a90b0cb68b0c5dd66 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 250 7.4E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05185 b42bf855d043685a90b0cb68b0c5dd66 263 PANTHER PTHR30151:SF18 37 263 1.3E-96 T 22-04-2016 RPIC_RS05185 b42bf855d043685a90b0cb68b0c5dd66 263 Gene3D G3DSA:1.10.3720.10 56 252 1.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05185 b42bf855d043685a90b0cb68b0c5dd66 263 SUPERFAMILY SSF161098 57 243 3.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05195 fd47de9d33dc0161525ff09967f08480 368 SUPERFAMILY SSF51395 3 366 1.78E-126 T 22-04-2016 RPIC_RS05195 fd47de9d33dc0161525ff09967f08480 368 PANTHER PTHR22893 2 367 4.6E-171 T 22-04-2016 RPIC_RS05195 fd47de9d33dc0161525ff09967f08480 368 PANTHER PTHR22893:SF14 2 367 4.6E-171 T 22-04-2016 RPIC_RS05195 fd47de9d33dc0161525ff09967f08480 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 342 4.1E-86 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIC_RS05195 fd47de9d33dc0161525ff09967f08480 368 Gene3D G3DSA:3.20.20.70 2 363 1.6E-137 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 615 7.5E-171 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Gene3D G3DSA:2.70.20.10 370 487 1.8E-18 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Gene3D G3DSA:2.70.20.10 215 339 4.7E-23 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 SMART SM00493 3 126 8.1E-12 T 22-04-2016 IPR006171 Toprim domain RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Pfam PF01751 Toprim domain 5 131 2.9E-10 T 22-04-2016 IPR006171 Toprim domain RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Gene3D G3DSA:1.10.460.10 156 214 3.8E-52 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Gene3D G3DSA:1.10.460.10 490 611 3.8E-52 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Pfam PF13342 C-terminal repeat of topoisomerase 754 814 2.2E-18 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Pfam PF13342 C-terminal repeat of topoisomerase 647 708 3.5E-21 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 SMART SM00437 279 557 2.0E-75 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 SUPERFAMILY SSF56712 3 610 8.89E-175 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Gene3D G3DSA:3.40.50.140 4 152 1.9E-41 T 22-04-2016 IPR006171 Toprim domain RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PANTHER PTHR11390 1 503 9.8E-154 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PANTHER PTHR11390 520 667 9.8E-154 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 Pfam PF01131 DNA topoisomerase 154 595 2.4E-117 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 SMART SM00436 126 221 6.1E-26 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 520 534 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 405 421 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS18270 67a1f63daf1e042ada3344698011be5f 876 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 RPIC_RS10020 bc54c3aaee92fc51e7afd2acb1c319ec 224 PIRSF PIRSF006324 8 223 4.0E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS10020 bc54c3aaee92fc51e7afd2acb1c319ec 224 Pfam PF01810 LysE type translocator 22 220 8.6E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS10020 bc54c3aaee92fc51e7afd2acb1c319ec 224 PANTHER PTHR30086 9 219 6.3E-89 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS10020 bc54c3aaee92fc51e7afd2acb1c319ec 224 PANTHER PTHR30086:SF15 9 219 6.3E-89 T 22-04-2016 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 Gene3D G3DSA:3.40.800.10 6 302 7.4E-72 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 PANTHER PTHR11358:SF2 4 296 1.6E-69 T 22-04-2016 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 Pfam PF00491 Arginase family 6 294 8.6E-61 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 PANTHER PTHR11358 4 296 1.6E-69 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 SUPERFAMILY SSF52768 5 303 1.8E-69 T 22-04-2016 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 PRINTS PR00116 Arginase signature 93 108 1.2E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 PRINTS PR00116 Arginase signature 222 251 1.2E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 PRINTS PR00116 Arginase signature 173 191 1.2E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS00240 dd0783892d86d687ecadb971d5f8d684 309 PRINTS PR00116 Arginase signature 119 146 1.2E-30 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS03590 873eccbc51a855048cd306867d905bda 953 Pfam PF10101 Predicted membrane protein (DUF2339) 177 938 1.5E-170 T 22-04-2016 IPR019286 Protein of unknown function DUF2339, transmembrane RPIC_RS03590 873eccbc51a855048cd306867d905bda 953 PANTHER PTHR38434 17 953 7.7E-84 T 22-04-2016 RPIC_RS03590 873eccbc51a855048cd306867d905bda 953 PIRSF PIRSF035905 1 947 5.5E-231 T 22-04-2016 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein RPIC_RS03590 873eccbc51a855048cd306867d905bda 953 PANTHER PTHR38434:SF1 17 953 7.7E-84 T 22-04-2016 RPIC_RS14435 e50867f8eb3f3b9d9d0194ab8016ae88 881 Gene3D G3DSA:3.40.50.300 338 370 5.1E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14435 e50867f8eb3f3b9d9d0194ab8016ae88 881 Pfam PF07714 Protein tyrosine kinase 136 223 3.7E-5 T 22-04-2016 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain GO:0004672|GO:0006468 RPIC_RS14435 e50867f8eb3f3b9d9d0194ab8016ae88 881 Gene3D G3DSA:1.10.510.10 134 228 2.8E-8 T 22-04-2016 RPIC_RS14435 e50867f8eb3f3b9d9d0194ab8016ae88 881 SUPERFAMILY SSF56112 65 282 9.29E-15 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS14435 e50867f8eb3f3b9d9d0194ab8016ae88 881 SUPERFAMILY SSF52540 338 545 1.29E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08285 e50867f8eb3f3b9d9d0194ab8016ae88 881 Gene3D G3DSA:3.40.50.300 338 370 5.1E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08285 e50867f8eb3f3b9d9d0194ab8016ae88 881 Pfam PF07714 Protein tyrosine kinase 136 223 3.7E-5 T 22-04-2016 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain GO:0004672|GO:0006468 RPIC_RS08285 e50867f8eb3f3b9d9d0194ab8016ae88 881 Gene3D G3DSA:1.10.510.10 134 228 2.8E-8 T 22-04-2016 RPIC_RS08285 e50867f8eb3f3b9d9d0194ab8016ae88 881 SUPERFAMILY SSF56112 65 282 9.29E-15 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS08285 e50867f8eb3f3b9d9d0194ab8016ae88 881 SUPERFAMILY SSF52540 338 545 1.29E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 SMART SM00893 23 211 3.2E-68 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 SUPERFAMILY SSF52402 1 242 2.02E-85 T 22-04-2016 RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 7.0E-45 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 PANTHER PTHR21294 1 249 1.2E-154 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 Gene3D G3DSA:3.40.50.620 1 247 2.1E-103 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 PIRSF PIRSF000090 1 249 2.1E-84 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 PANTHER PTHR21294:SF8 1 249 1.2E-154 T 22-04-2016 RPIC_RS03885 c13f83f51b5cb64fda03ddbc08e72e10 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 RPIC_RS17740 cc8d4ad3b9901dcd2ae558a941fffe82 162 PANTHER PTHR41294 2 162 6.2E-38 T 22-04-2016 RPIC_RS17740 cc8d4ad3b9901dcd2ae558a941fffe82 162 Gene3D G3DSA:3.10.180.10 5 114 7.0E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS17740 cc8d4ad3b9901dcd2ae558a941fffe82 162 SUPERFAMILY SSF54593 2 119 3.09E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS17740 cc8d4ad3b9901dcd2ae558a941fffe82 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 112 2.7E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS17740 cc8d4ad3b9901dcd2ae558a941fffe82 162 PANTHER PTHR41294:SF1 2 162 6.2E-38 T 22-04-2016 RPIC_RS11265 5ce91f5c7dddb140174559f434b1b802 160 Gene3D G3DSA:1.20.141.10 3 154 6.2E-47 T 22-04-2016 RPIC_RS11265 5ce91f5c7dddb140174559f434b1b802 160 SUPERFAMILY SSF53955 2 154 9.0E-45 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS11265 5ce91f5c7dddb140174559f434b1b802 160 Pfam PF05838 Glycosyl hydrolase 108 9 88 1.1E-22 T 22-04-2016 IPR008565 Protein of unknown function DUF847 RPIC_RS11265 5ce91f5c7dddb140174559f434b1b802 160 Pfam PF09374 Predicted Peptidoglycan domain 89 150 2.1E-7 T 22-04-2016 IPR018537 Peptidoglycan binding domain RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 Pfam PF03466 LysR substrate binding domain 87 303 5.6E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 SUPERFAMILY SSF53850 90 302 3.26E-31 T 22-04-2016 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 Gene3D G3DSA:1.10.10.10 1 77 1.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 SUPERFAMILY SSF46785 1 84 2.49E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 Gene3D G3DSA:3.40.190.10 171 281 1.8E-40 T 22-04-2016 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 Gene3D G3DSA:3.40.190.10 88 170 6.0E-26 T 22-04-2016 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 PANTHER PTHR30346:SF0 1 306 7.2E-84 T 22-04-2016 RPIC_RS13175 64a2644945915ee845fb6d4c05550323 314 PANTHER PTHR30346 1 306 7.2E-84 T 22-04-2016 RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 Hamap MF_01227 CTP synthase [pyrG]. 2 545 50.911 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 Pfam PF06418 CTP synthase N-terminus 3 270 3.1E-124 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 PANTHER PTHR11550 1 547 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 SUPERFAMILY SSF52540 2 270 1.06E-118 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 Gene3D G3DSA:3.40.50.300 1 288 7.9E-132 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 6.7E-238 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 Pfam PF00117 Glutamine amidotransferase class-I 305 539 3.5E-55 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 SUPERFAMILY SSF52317 292 546 3.44E-85 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS04785 9398ae6e96c9590dafbe194e881f8233 553 Gene3D G3DSA:3.40.50.880 291 546 2.8E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 Gene3D G3DSA:3.40.640.10 44 263 6.0E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 SUPERFAMILY SSF53383 32 397 3.4E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 Gene3D G3DSA:3.90.1150.10 264 397 2.0E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 PANTHER PTHR11751:SF354 12 395 1.6E-114 T 22-04-2016 RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 PANTHER PTHR11751 12 395 1.6E-114 T 22-04-2016 RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 396 1.4E-184 T 22-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 RPIC_RS06295 4a882b12cfa5099c58ccef71e76bf6be 399 Pfam PF00155 Aminotransferase class I and II 32 384 8.6E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 217 30.404 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 SUPERFAMILY SSF53335 27 216 1.19E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 Pfam PF01728 FtsJ-like methyltransferase 28 216 1.5E-49 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 PANTHER PTHR10920:SF20 1 218 5.5E-87 T 22-04-2016 RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 PANTHER PTHR10920 1 218 5.5E-87 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 Gene3D G3DSA:3.40.50.150 3 219 7.1E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS09995 bfd06f55ccdc5309c0be32069447af69 221 PIRSF PIRSF005461 1 221 1.4E-66 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 RPIC_RS00530 903a8677f9494288891247c1249d2c0f 317 PANTHER PTHR11935 9 228 3.1E-28 T 22-04-2016 RPIC_RS00530 903a8677f9494288891247c1249d2c0f 317 SUPERFAMILY SSF56281 20 235 3.22E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00530 903a8677f9494288891247c1249d2c0f 317 Pfam PF00753 Metallo-beta-lactamase superfamily 25 214 3.7E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00530 903a8677f9494288891247c1249d2c0f 317 Gene3D G3DSA:3.60.15.10 17 239 2.0E-41 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS00530 903a8677f9494288891247c1249d2c0f 317 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 68 88 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 RPIC_RS00530 903a8677f9494288891247c1249d2c0f 317 SMART SM00849 23 214 2.2E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 8.4E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 SUPERFAMILY SSF50104 1 119 4.21E-45 T 22-04-2016 IPR008991 Translation protein SH3-like domain RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 Pfam PF01245 Ribosomal protein L19 2 117 6.6E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.2E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.2E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.2E-34 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 30.767 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 PANTHER PTHR15680 2 123 5.1E-53 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03955 9d48c9c37684401a309a60882b3ca875 128 PIRSF PIRSF002191 1 128 6.4E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Gene3D G3DSA:3.30.365.10 21 111 1.9E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Gene3D G3DSA:3.30.365.10 149 227 1.9E-37 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 PANTHER PTHR11908 51 760 3.7E-146 T 22-04-2016 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 PANTHER PTHR11908:SF2 51 760 3.7E-146 T 22-04-2016 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 54 109 1.1E-8 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 360 594 1.0E-25 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 641 719 2.6E-14 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Gene3D G3DSA:3.30.365.10 432 594 1.2E-28 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 PIRSF PIRSF036389 1 765 1.4E-260 T 22-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 SMART SM01008 248 332 5.9E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Gene3D G3DSA:3.90.1170.50 228 330 3.4E-21 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 Gene3D G3DSA:3.30.365.10 595 764 7.1E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 SUPERFAMILY SSF56003 357 764 3.01E-104 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 SUPERFAMILY SSF56003 24 111 2.86E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10280 9eea043edf9a84911bea80ec7c33ebc8 765 SUPERFAMILY SSF56003 149 280 2.86E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 Pfam PF02355 Protein export membrane protein 430 602 1.8E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 Pfam PF13721 SecD export protein N-terminal TM region 1 112 8.4E-37 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 PANTHER PTHR30081:SF1 326 607 7.7E-165 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 PANTHER PTHR30081:SF1 1 184 7.7E-165 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 PANTHER PTHR30081:SF1 237 295 7.7E-165 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 SUPERFAMILY SSF82866 408 607 3.14E-37 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 Gene3D G3DSA:1.20.1640.10 441 609 1.1E-19 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 Pfam PF07549 SecD/SecF GG Motif 127 151 3.6E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 134 598 7.3E-132 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 PANTHER PTHR30081 326 607 7.7E-165 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 PANTHER PTHR30081 1 184 7.7E-165 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 PANTHER PTHR30081 237 295 7.7E-165 T 22-04-2016 RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 358 591 5.2E-68 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RPIC_RS14570 7518eb9fb00c1a42a314d4aed7b6ed21 629 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 614 44.927 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RPIC_RS18235 bd81dc61aef6cb5bf19dd0c73b45bb08 218 PIRSF PIRSF006324 3 218 6.9E-63 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS18235 bd81dc61aef6cb5bf19dd0c73b45bb08 218 Pfam PF01810 LysE type translocator 19 215 3.1E-41 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS18235 bd81dc61aef6cb5bf19dd0c73b45bb08 218 PANTHER PTHR30086 4 215 1.5E-70 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS18235 bd81dc61aef6cb5bf19dd0c73b45bb08 218 PANTHER PTHR30086:SF2 4 215 1.5E-70 T 22-04-2016 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 PANTHER PTHR10909 12 381 5.9E-157 T 22-04-2016 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 Gene3D G3DSA:1.20.140.10 220 381 6.5E-52 T 22-04-2016 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 Gene3D G3DSA:1.10.540.10 11 122 2.6E-31 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 220 4.9E-23 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 14 121 1.2E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 380 1.9E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 PANTHER PTHR10909:SF190 12 381 5.9E-157 T 22-04-2016 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 SUPERFAMILY SSF47203 233 380 1.77E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 Gene3D G3DSA:2.40.110.10 124 219 1.8E-36 T 22-04-2016 RPIC_RS12965 572c418d2d4d3d7eddf3d084d4627366 381 SUPERFAMILY SSF56645 7 245 6.81E-73 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS00690 9bad5fd211e04a50326160fd9d2dc42a 46 Pfam PF08085 Entericidin EcnA/B family 19 39 7.8E-10 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 SUPERFAMILY SSF55486 149 268 1.83E-38 T 22-04-2016 RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 159 262 2.3E-32 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 Gene3D G3DSA:3.40.390.30 141 269 4.9E-42 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 PANTHER PTHR22881 140 268 6.5E-39 T 22-04-2016 RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 Pfam PF02130 Uncharacterized protein family UPF0054 149 260 3.0E-30 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 231 241 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site RPIC_RS01995 797f2084e0b4bdf193cc77d4217fe319 270 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 121 265 21.078 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PANTHER PTHR24322 11 150 1.5E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PANTHER PTHR24322 166 202 1.5E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PANTHER PTHR24322:SF356 11 150 1.5E-49 T 22-04-2016 RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PANTHER PTHR24322:SF356 166 202 1.5E-49 T 22-04-2016 RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 9.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 9.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 9.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 SUPERFAMILY SSF51735 8 256 1.17E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.1E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.1E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.1E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.1E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.1E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 Gene3D G3DSA:3.40.50.720 9 256 1.9E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12940 360a6247e65db60ed785945e9c056036 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 2.2E-41 T 22-04-2016 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 Gene3D G3DSA:3.40.50.1370 7 144 1.8E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 302 1.3E-48 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 Gene3D G3DSA:3.40.50.1370 145 291 1.3E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PANTHER PTHR11405:SF1 8 304 3.8E-130 T 22-04-2016 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 4.7E-49 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 5.4E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 304 8.6E-107 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 6.7E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 PANTHER PTHR11405 8 304 3.8E-130 T 22-04-2016 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 SUPERFAMILY SSF53671 7 304 4.49E-103 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RPIC_RS13940 8ec85db3bca2b131008da269a5a6fa04 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 305 75.961 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 PRINTS PR00604 Class IA and IB cytochrome C signature 81 97 2.8E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 PRINTS PR00604 Class IA and IB cytochrome C signature 100 110 2.8E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 PRINTS PR00604 Class IA and IB cytochrome C signature 117 125 2.8E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 PRINTS PR00604 Class IA and IB cytochrome C signature 38 45 2.8E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 PRINTS PR00604 Class IA and IB cytochrome C signature 50 65 2.8E-15 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 Gene3D G3DSA:1.10.760.10 26 127 1.5E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 SUPERFAMILY SSF46626 26 126 7.31E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 PANTHER PTHR11961 2 136 4.8E-27 T 22-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 RPIC_RS08785 1a464e33e00c3cfc8125299f4f44412f 224 Pfam PF00034 Cytochrome c 30 125 1.4E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS24770 f07c6521e6568008101ad4ec836fea3e 117 PANTHER PTHR11986 1 116 1.4E-47 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS24770 f07c6521e6568008101ad4ec836fea3e 117 SUPERFAMILY SSF53383 1 116 4.59E-23 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS24770 f07c6521e6568008101ad4ec836fea3e 117 Gene3D G3DSA:3.40.640.10 1 116 8.8E-26 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS24770 f07c6521e6568008101ad4ec836fea3e 117 Pfam PF00202 Aminotransferase class-III 1 109 2.2E-20 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS24770 f07c6521e6568008101ad4ec836fea3e 117 PANTHER PTHR11986:SF18 1 116 1.4E-47 T 22-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 RPIC_RS11940 67583d52edd12e1458c8068e3692f7cc 149 SUPERFAMILY SSF89095 2 146 2.82E-43 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RPIC_RS11940 67583d52edd12e1458c8068e3692f7cc 149 PANTHER PTHR28055 2 149 3.1E-55 T 22-04-2016 RPIC_RS11940 67583d52edd12e1458c8068e3692f7cc 149 Gene3D G3DSA:1.10.10.410 91 147 1.0E-22 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RPIC_RS11940 67583d52edd12e1458c8068e3692f7cc 149 Pfam PF09424 Yqey-like protein 4 146 1.0E-56 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial RPIC_RS11940 67583d52edd12e1458c8068e3692f7cc 149 Gene3D G3DSA:1.10.1510.10 2 90 1.7E-34 T 22-04-2016 RPIC_RS11940 67583d52edd12e1458c8068e3692f7cc 149 PANTHER PTHR28055:SF1 2 149 3.1E-55 T 22-04-2016 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 Gene3D G3DSA:1.10.287.950 365 569 7.1E-65 T 22-04-2016 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 Pfam PF02743 Cache domain 38 257 6.8E-27 T 22-04-2016 IPR033479 Double Cache domain 1 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 SUPERFAMILY SSF58104 317 598 1.57E-78 T 22-04-2016 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 SMART SM00283 350 597 4.9E-94 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 SMART SM00304 295 349 3.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 SUPERFAMILY SSF103190 89 175 1.75E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 PANTHER PTHR32089 89 600 1.5E-205 T 22-04-2016 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 402 596 5.3E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 Pfam PF00672 HAMP domain 277 345 1.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 PANTHER PTHR32089:SF63 89 600 1.5E-205 T 22-04-2016 RPIC_RS02630 16642f706cc1d4b0123f0b03f834de90 600 Gene3D G3DSA:3.30.450.20 135 272 3.6E-28 T 22-04-2016 RPIC_RS04225 d4f72e73e0746f9816a51b711a522bec 291 Gene3D G3DSA:3.40.50.150 47 278 2.1E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04225 d4f72e73e0746f9816a51b711a522bec 291 SUPERFAMILY SSF53335 47 269 8.53E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS21500 d31d74d8a2723478c5141f27a8ed2059 101 SUPERFAMILY SSF52172 29 97 4.27E-22 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS21500 d31d74d8a2723478c5141f27a8ed2059 101 Gene3D G3DSA:3.40.50.2300 29 99 1.1E-20 T 22-04-2016 RPIC_RS21500 d31d74d8a2723478c5141f27a8ed2059 101 Pfam PF00072 Response regulator receiver domain 32 99 5.8E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS21500 d31d74d8a2723478c5141f27a8ed2059 101 PANTHER PTHR26402 30 96 3.7E-32 T 22-04-2016 RPIC_RS21500 d31d74d8a2723478c5141f27a8ed2059 101 PANTHER PTHR26402:SF568 30 96 3.7E-32 T 22-04-2016 RPIC_RS06280 acaba685d66ebd90498c49de916be5f1 114 SUPERFAMILY SSF52833 1 113 6.15E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06280 acaba685d66ebd90498c49de916be5f1 114 PANTHER PTHR30041:SF3 1 114 5.3E-35 T 22-04-2016 RPIC_RS06280 acaba685d66ebd90498c49de916be5f1 114 PANTHER PTHR30041 1 114 5.3E-35 T 22-04-2016 RPIC_RS06280 acaba685d66ebd90498c49de916be5f1 114 Gene3D G3DSA:3.40.30.10 1 114 4.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06280 acaba685d66ebd90498c49de916be5f1 114 Pfam PF03960 ArsC family 6 112 2.5E-17 T 22-04-2016 IPR006660 Arsenate reductase-like RPIC_RS06280 acaba685d66ebd90498c49de916be5f1 114 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 112 6.7E-29 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR RPIC_RS02845 f2d77e269cabb4ef168a0875151f1669 148 Pfam PF07811 TadE-like protein 7 49 2.1E-13 T 22-04-2016 IPR012495 TadE-like RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 SUPERFAMILY SSF53067 17 147 1.04E-21 T 22-04-2016 RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 Gene3D G3DSA:3.30.420.40 120 286 8.5E-42 T 22-04-2016 RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 Hamap MF_01274 Type III pantothenate kinase [coaX]. 16 286 20.131 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 Pfam PF03309 Type III pantothenate kinase 17 237 6.9E-60 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 SUPERFAMILY SSF53067 151 282 5.18E-29 T 22-04-2016 RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 17 282 1.3E-25 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 RPIC_RS00805 e1689285b2426bf2d532bda70622b375 293 PANTHER PTHR34265 1 287 7.1E-40 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 50.397 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 SUPERFAMILY SSF54373 269 359 2.75E-17 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 PANTHER PTHR13847:SF148 1 63 1.0E-218 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 PANTHER PTHR13847:SF148 107 415 1.0E-218 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 PANTHER PTHR13847 1 63 1.0E-218 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 PANTHER PTHR13847 107 415 1.0E-218 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Gene3D G3DSA:3.30.9.10 134 193 3.4E-13 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Gene3D G3DSA:3.30.9.10 270 352 3.4E-13 T 22-04-2016 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Gene3D G3DSA:3.40.50.720 194 269 5.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Gene3D G3DSA:3.40.50.720 1 96 5.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Gene3D G3DSA:3.40.50.720 353 415 5.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 SUPERFAMILY SSF51905 107 271 8.16E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 SUPERFAMILY SSF51905 1 54 8.16E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 SUPERFAMILY SSF51905 359 418 8.16E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03900 a1584798c9714be17671764a03edf5ab 429 Pfam PF01266 FAD dependent oxidoreductase 3 397 2.5E-68 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 7 171 1.2E-52 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 Pfam PF08534 Redoxin 35 164 3.8E-21 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 PANTHER PTHR10681 3 176 2.3E-54 T 22-04-2016 RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 PANTHER PTHR10681:SF107 3 176 2.3E-54 T 22-04-2016 RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 SUPERFAMILY SSF52833 8 170 1.41E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14050 57b1a6284b43acd46f74575baac05c04 180 Gene3D G3DSA:3.40.30.10 5 175 2.4E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06190 e35955dafbb9316ab02950579813f070 159 SUPERFAMILY SSF158442 8 151 7.59E-36 T 22-04-2016 RPIC_RS06190 e35955dafbb9316ab02950579813f070 159 Gene3D G3DSA:1.20.1550.10 4 158 2.0E-47 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain RPIC_RS06190 e35955dafbb9316ab02950579813f070 159 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 1 159 20.172 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB RPIC_RS06190 e35955dafbb9316ab02950579813f070 159 PANTHER PTHR36570 1 156 1.8E-21 T 22-04-2016 RPIC_RS06190 e35955dafbb9316ab02950579813f070 159 Pfam PF02600 Disulfide bond formation protein DsbB 6 151 2.3E-37 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 SUPERFAMILY SSF47648 98 165 3.92E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Gene3D G3DSA:3.90.1170.30 418 495 5.7E-18 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 205 220 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Gene3D G3DSA:3.40.1030.10 165 415 2.4E-65 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Pfam PF00591 Glycosyl transferase family, a/b domain 171 249 5.4E-8 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 SUPERFAMILY SSF52418 165 415 1.02E-62 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 PANTHER PTHR10515:SF0 73 494 4.5E-110 T 22-04-2016 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 SMART SM00941 432 499 1.3E-20 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Pfam PF02885 Glycosyl transferase family, helical bundle domain 104 162 2.4E-7 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 SUPERFAMILY SSF54680 419 499 5.23E-17 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Gene3D G3DSA:1.20.970.10 99 163 3.2E-10 T 22-04-2016 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 433 495 8.5E-12 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 TIGRFAM TIGR02645 ARCH_P_rylase: putative thymidine phosphorylase 10 500 2.4E-179 T 22-04-2016 IPR013466 Thymidine phosphorylase/AMP phosphorylase GO:0016763 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 Hamap MF_00703 Putative thymidine phosphorylase. 11 502 58.563 T 22-04-2016 IPR028579 Putative thymidine phosphorylase KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 RPIC_RS08395 53935eee7b09f05dff0dfe37196a51ac 504 PANTHER PTHR10515 73 494 4.5E-110 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 RPIC_RS14995 21aa22158ae285ce2d880d750a0160bc 285 SUPERFAMILY SSF103481 172 268 1.44E-10 T 22-04-2016 RPIC_RS14995 21aa22158ae285ce2d880d750a0160bc 285 PANTHER PTHR22911 1 276 7.4E-77 T 22-04-2016 RPIC_RS14995 21aa22158ae285ce2d880d750a0160bc 285 SUPERFAMILY SSF103481 35 128 1.06E-5 T 22-04-2016 RPIC_RS14995 21aa22158ae285ce2d880d750a0160bc 285 PANTHER PTHR22911:SF37 1 276 7.4E-77 T 22-04-2016 RPIC_RS14995 21aa22158ae285ce2d880d750a0160bc 285 Pfam PF00892 EamA-like transporter family 137 266 4.5E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 PANTHER PTHR13903:SF4 4 289 2.6E-106 T 22-04-2016 RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 Gene3D G3DSA:2.60.120.10 8 245 1.4E-69 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 SUPERFAMILY SSF51182 4 286 3.78E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 PIRSF PIRSF006232 1 283 1.2E-86 T 22-04-2016 IPR012093 Pirin RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 Pfam PF05726 Pirin C-terminal cupin domain 176 274 1.8E-25 T 22-04-2016 IPR008778 Pirin, C-terminal domain RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 PANTHER PTHR13903 4 289 2.6E-106 T 22-04-2016 IPR012093 Pirin RPIC_RS01130 e25ff6dd8513d27c0a5665050ba5d02b 289 Pfam PF02678 Pirin 18 123 5.4E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 TIGRFAM TIGR03276 Phn-HD: phosphonate degradation operons associated HDIG domain protein 4 179 4.1E-74 T 22-04-2016 IPR017670 Phosphonate degradation operon associated HDIG domain protein RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 PANTHER PTHR40202 5 179 2.1E-35 T 22-04-2016 RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 Pfam PF01966 HD domain 28 99 8.4E-5 T 22-04-2016 IPR006674 HD domain RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 PANTHER PTHR40202:SF1 5 179 2.1E-35 T 22-04-2016 RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 SUPERFAMILY SSF109604 18 69 4.07E-9 T 22-04-2016 RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 SMART SM00471 23 126 0.0014 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS17500 2b2fceaedc0395a5afd97b9632bc226d 183 Gene3D G3DSA:1.10.3210.10 28 103 3.6E-4 T 22-04-2016 IPR006674 HD domain RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 Gene3D G3DSA:3.40.190.10 152 204 9.3E-7 T 22-04-2016 RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 PANTHER PTHR18966:SF243 20 263 7.1E-113 T 22-04-2016 RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 PANTHER PTHR18966 20 263 7.1E-113 T 22-04-2016 RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 SMART SM00062 40 264 2.1E-42 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 SUPERFAMILY SSF53850 12 263 3.72E-54 T 22-04-2016 RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 Gene3D G3DSA:3.40.190.10 10 151 1.4E-33 T 22-04-2016 RPIC_RS13690 52b51db853df3c331ec5f7929cd9a511 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 261 1.4E-42 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 SUPERFAMILY SSF140959 34 290 1.57E-104 T 22-04-2016 RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 202 289 1.9E-26 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 Pfam PF03301 Tryptophan 2,3-dioxygenase 24 172 7.1E-42 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 28 291 4.5E-138 T 22-04-2016 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 PANTHER PTHR10138 22 291 8.7E-101 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 PANTHER PTHR10138:SF0 22 291 8.7E-101 T 22-04-2016 RPIC_RS03465 de657ca54fbbd13ae7a4d4f684f01003 291 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 28 291 41.428 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 RPIC_RS00380 19b738abf861455013aa5cd0ad14ce6b 397 PANTHER PTHR36840 18 336 3.7E-64 T 22-04-2016 RPIC_RS00380 19b738abf861455013aa5cd0ad14ce6b 397 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 18 377 2.0E-111 T 22-04-2016 IPR010640 Low temperature requirement A RPIC_RS00380 19b738abf861455013aa5cd0ad14ce6b 397 PANTHER PTHR36840:SF1 18 336 3.7E-64 T 22-04-2016 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 159.811 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 SUPERFAMILY SSF56059 123 310 6.19E-55 T 22-04-2016 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 123 296 9.7E-72 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 311 1.0E-122 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 PANTHER PTHR21621:SF4 1 310 5.2E-114 T 22-04-2016 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 119 3.1E-44 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 Gene3D G3DSA:3.30.1490.20 136 190 6.0E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 Gene3D G3DSA:3.30.470.20 191 299 1.8E-44 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 PANTHER PTHR21621 1 310 5.2E-114 T 22-04-2016 RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 SUPERFAMILY SSF52440 1 121 5.47E-42 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS00975 f1d3317a4ab1f90862b6d5812c183f36 323 Gene3D G3DSA:3.40.50.20 1 128 7.1E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS16985 657783bb20f209b0034a234452478076 147 SUPERFAMILY SSF49764 6 145 2.3E-35 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC_RS16985 657783bb20f209b0034a234452478076 147 PANTHER PTHR11527:SF122 13 147 2.1E-28 T 22-04-2016 RPIC_RS16985 657783bb20f209b0034a234452478076 147 Pfam PF00011 Hsp20/alpha crystallin family 47 146 3.9E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain RPIC_RS16985 657783bb20f209b0034a234452478076 147 PANTHER PTHR11527 13 147 2.1E-28 T 22-04-2016 IPR031107 Small heat shock protein HSP20 RPIC_RS16985 657783bb20f209b0034a234452478076 147 Gene3D G3DSA:2.60.40.790 7 146 1.6E-34 T 22-04-2016 IPR008978 HSP20-like chaperone RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PANTHER PTHR24322:SF356 10 142 7.6E-56 T 22-04-2016 RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PANTHER PTHR24322:SF356 158 194 7.6E-56 T 22-04-2016 RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 7.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 7.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 7.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 7.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.1E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 6.2E-4 T 22-04-2016 RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 6.3E-45 T 22-04-2016 RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 SUPERFAMILY SSF51735 4 247 1.73E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PANTHER PTHR24322 10 142 7.6E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 PANTHER PTHR24322 158 194 7.6E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS13845 573230dee3158866197c479ec0457bfb 252 Gene3D G3DSA:3.40.50.720 2 249 1.2E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 SUPERFAMILY SSF53187 314 415 1.64E-73 T 22-04-2016 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 SUPERFAMILY SSF53187 8 211 1.64E-73 T 22-04-2016 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 374 1.2E-81 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 Gene3D G3DSA:3.40.630.10 314 415 1.1E-84 T 22-04-2016 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 Gene3D G3DSA:3.40.630.10 6 192 1.1E-84 T 22-04-2016 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 PANTHER PTHR11014 16 403 8.2E-135 T 22-04-2016 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 Pfam PF01546 Peptidase family M20/M25/M40 76 377 2.4E-26 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 Pfam PF07687 Peptidase dimerisation domain 200 290 1.0E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 SUPERFAMILY SSF55031 199 300 2.75E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 PANTHER PTHR11014:SF89 16 403 8.2E-135 T 22-04-2016 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 PIRSF PIRSF005962 5 417 3.1E-98 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS12435 638680e62e58c4c29d3f9d8469ba8600 421 Gene3D G3DSA:3.30.70.360 197 313 2.2E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS02505 5f3f9b78f59c56ea4b265df3e065c935 440 SUPERFAMILY SSF103473 18 438 7.32E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS02505 5f3f9b78f59c56ea4b265df3e065c935 440 PANTHER PTHR11662 10 440 7.7E-142 T 22-04-2016 RPIC_RS02505 5f3f9b78f59c56ea4b265df3e065c935 440 Gene3D G3DSA:1.20.1250.20 254 438 6.0E-21 T 22-04-2016 RPIC_RS02505 5f3f9b78f59c56ea4b265df3e065c935 440 Pfam PF07690 Major Facilitator Superfamily 40 402 4.7E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS02505 5f3f9b78f59c56ea4b265df3e065c935 440 Gene3D G3DSA:1.20.1250.20 29 231 1.6E-45 T 22-04-2016 RPIC_RS02505 5f3f9b78f59c56ea4b265df3e065c935 440 PANTHER PTHR11662:SF3 10 440 7.7E-142 T 22-04-2016 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 Gene3D G3DSA:3.40.190.10 95 174 3.5E-20 T 22-04-2016 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 PANTHER PTHR30537:SF26 1 308 9.9E-97 T 22-04-2016 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 SUPERFAMILY SSF53850 94 293 1.74E-29 T 22-04-2016 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 Pfam PF03466 LysR substrate binding domain 94 291 8.2E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 Gene3D G3DSA:3.40.190.10 175 257 2.7E-20 T 22-04-2016 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 Gene3D G3DSA:1.10.10.10 2 85 1.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 PANTHER PTHR30537 1 308 9.9E-97 T 22-04-2016 RPIC_RS14775 11221caed8ff1f8cf7e67107fc13a64e 308 SUPERFAMILY SSF46785 3 86 3.21E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 Pfam PF01979 Amidohydrolase family 75 434 4.4E-57 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 SUPERFAMILY SSF51556 77 380 3.04E-96 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 Gene3D G3DSA:2.30.40.10 380 395 8.9E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 Gene3D G3DSA:2.30.40.10 34 78 8.9E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 PANTHER PTHR11271 28 434 1.2E-139 T 22-04-2016 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 PANTHER PTHR11271:SF6 28 434 1.2E-139 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 33 433 4.5E-176 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 SUPERFAMILY SSF51338 31 92 6.91E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS11070 af728f5d79b951d9dacffe98ac8fd307 444 Gene3D G3DSA:3.20.20.140 79 379 1.7E-107 T 22-04-2016 RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 SMART SM00382 289 494 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 SMART SM00382 35 223 4.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 Gene3D G3DSA:3.40.50.300 276 489 3.4E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 Gene3D G3DSA:3.40.50.300 10 249 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 SUPERFAMILY SSF52540 268 488 6.73E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 PANTHER PTHR24220:SF308 13 391 1.7E-150 T 22-04-2016 RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 PANTHER PTHR24220 13 391 1.7E-150 T 22-04-2016 RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 SUPERFAMILY SSF52540 10 236 9.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 Pfam PF00005 ABC transporter 281 436 2.2E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS04330 ec78bda9d3531369732454342e6a3d10 526 Pfam PF00005 ABC transporter 26 175 6.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS02610 c3750b5688f3b30073e046cad7c0dea8 259 PANTHER PTHR30462 42 232 4.2E-14 T 22-04-2016 RPIC_RS02610 c3750b5688f3b30073e046cad7c0dea8 259 PANTHER PTHR30462:SF3 42 232 4.2E-14 T 22-04-2016 RPIC_RS02610 c3750b5688f3b30073e046cad7c0dea8 259 Pfam PF04403 Paraquat-inducible protein A 82 232 7.0E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 Gene3D G3DSA:3.40.50.150 7 220 3.3E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 PIRSF PIRSF003078 5 221 5.3E-53 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 PANTHER PTHR31760:SF0 1 219 6.8E-63 T 22-04-2016 RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 218 3.7E-47 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 SUPERFAMILY SSF53335 14 219 8.76E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 217 26.424 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 Pfam PF02527 rRNA small subunit methyltransferase G 29 216 2.1E-48 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RPIC_RS17455 915ec755b7e1d4209fca0f87ebcb4476 222 PANTHER PTHR31760 1 219 6.8E-63 T 22-04-2016 RPIC_RS05285 e2e71f71025e0aa9ba8df37df32c3ac2 79 PANTHER PTHR34772:SF1 2 78 8.2E-35 T 22-04-2016 RPIC_RS05285 e2e71f71025e0aa9ba8df37df32c3ac2 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RPIC_RS05285 e2e71f71025e0aa9ba8df37df32c3ac2 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RPIC_RS05285 e2e71f71025e0aa9ba8df37df32c3ac2 79 Gene3D G3DSA:2.30.30.100 2 70 9.7E-37 T 22-04-2016 RPIC_RS05285 e2e71f71025e0aa9ba8df37df32c3ac2 79 SUPERFAMILY SSF50182 8 70 1.34E-23 T 22-04-2016 IPR010920 LSM domain RPIC_RS05285 e2e71f71025e0aa9ba8df37df32c3ac2 79 PANTHER PTHR34772 2 78 8.2E-35 T 22-04-2016 RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 PANTHER PTHR30629:SF3 1 391 1.1E-113 T 22-04-2016 RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 PANTHER PTHR30629 1 391 1.1E-113 T 22-04-2016 RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 Pfam PF00589 Phage integrase family 209 360 1.7E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 9.0E-18 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 Gene3D G3DSA:1.10.150.130 98 196 2.6E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 Gene3D G3DSA:1.10.443.10 210 372 1.9E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS10185 5b1dc4218817cb1011bdb9f312949abf 407 SUPERFAMILY SSF56349 99 382 1.35E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 SUPERFAMILY SSF53187 418 494 6.91E-54 T 22-04-2016 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 SUPERFAMILY SSF53187 275 370 6.91E-54 T 22-04-2016 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 Pfam PF11741 AMIN domain 54 157 3.4E-23 T 22-04-2016 IPR021731 AMIN domain RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 PANTHER PTHR30404:SF0 49 201 8.8E-99 T 22-04-2016 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 PANTHER PTHR30404:SF0 263 499 8.8E-99 T 22-04-2016 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 PANTHER PTHR30404 49 201 8.8E-99 T 22-04-2016 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 PANTHER PTHR30404 263 499 8.8E-99 T 22-04-2016 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 SMART SM00646 336 491 1.2E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 Gene3D G3DSA:3.40.630.40 419 494 1.5E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 Gene3D G3DSA:3.40.630.40 275 371 1.5E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC_RS13865 b32c42e27e52969f768ffdb9571cf8b4 506 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 276 491 1.2E-47 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 PANTHER PTHR13789:SF241 2 407 2.6E-103 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 Pfam PF01494 FAD binding domain 2 358 2.2E-21 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 SUPERFAMILY SSF54373 182 289 2.94E-31 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 Gene3D G3DSA:3.50.50.60 285 358 1.9E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 Gene3D G3DSA:3.50.50.60 1 182 1.9E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 7.5E-18 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 7.5E-18 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 7.5E-18 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 7.5E-18 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 PANTHER PTHR13789 2 407 2.6E-103 T 22-04-2016 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 SUPERFAMILY SSF51905 1 177 2.48E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02525 0cc3eaa472e08ef50ce474a3eb4fbc91 421 SUPERFAMILY SSF51905 285 368 2.48E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 SUPERFAMILY SSF53271 71 305 1.39E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 315 49.139 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 Gene3D G3DSA:3.40.50.2020 162 289 2.4E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 Gene3D G3DSA:3.40.50.2020 3 161 2.8E-77 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 314 7.1E-28 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 7.8E-123 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 1.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 PANTHER PTHR10210 1 314 8.7E-181 T 22-04-2016 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 PANTHER PTHR10210:SF41 1 314 8.7E-181 T 22-04-2016 RPIC_RS01215 c78e66a4c97dda5614856368670f6db9 316 SMART SM01400 6 123 4.8E-80 T 22-04-2016 RPIC_RS13110 b5f729722a2144702d219910061d9a67 256 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 256 53.296 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS13110 b5f729722a2144702d219910061d9a67 256 Pfam PF02654 Cobalamin-5-phosphate synthase 14 247 1.3E-53 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS13110 b5f729722a2144702d219910061d9a67 256 PANTHER PTHR34148 1 254 1.2E-55 T 22-04-2016 RPIC_RS13110 b5f729722a2144702d219910061d9a67 256 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 9 250 7.3E-34 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS13110 b5f729722a2144702d219910061d9a67 256 PANTHER PTHR34148:SF1 1 254 1.2E-55 T 22-04-2016 RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PANTHER PTHR24322:SF485 155 185 4.5E-17 T 22-04-2016 RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PANTHER PTHR24322:SF485 9 139 4.5E-17 T 22-04-2016 RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 SUPERFAMILY SSF51735 7 232 4.03E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 Gene3D G3DSA:3.40.50.720 7 229 5.4E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PANTHER PTHR24322 155 185 4.5E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PANTHER PTHR24322 9 139 4.5E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.9E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 189 9.8E-4 T 22-04-2016 RPIC_RS04395 3f976f8609b24bb111437f52622f0012 246 Pfam PF00106 short chain dehydrogenase 8 196 1.5E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS08320 bb419a2bb534d09c23bf8b1b28fc075b 565 Gene3D G3DSA:3.90.1200.10 245 322 7.5E-10 T 22-04-2016 RPIC_RS08320 bb419a2bb534d09c23bf8b1b28fc075b 565 PANTHER PTHR10566 4 553 6.8E-139 T 22-04-2016 RPIC_RS08320 bb419a2bb534d09c23bf8b1b28fc075b 565 SUPERFAMILY SSF56112 104 167 2.81E-28 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS08320 bb419a2bb534d09c23bf8b1b28fc075b 565 SUPERFAMILY SSF56112 207 377 2.81E-28 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS08320 bb419a2bb534d09c23bf8b1b28fc075b 565 PANTHER PTHR10566:SF10 4 553 6.8E-139 T 22-04-2016 RPIC_RS08320 bb419a2bb534d09c23bf8b1b28fc075b 565 Pfam PF03109 ABC1 family 122 239 1.6E-34 T 22-04-2016 IPR004147 UbiB domain RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 69 88 2.0E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 2.0E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 2.0E-13 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 PANTHER PTHR22769:SF28 1 139 1.5E-25 T 22-04-2016 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 PANTHER PTHR22769 1 139 1.5E-25 T 22-04-2016 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 Pfam PF00293 NUDIX domain 6 135 3.7E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 SUPERFAMILY SSF55811 4 147 2.44E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS01680 d1f96297b5824a92c544fe0c52304b22 161 Gene3D G3DSA:3.90.79.10 4 147 2.6E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SUPERFAMILY SSF52540 420 628 1.39E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Pfam PF07517 SecA DEAD-like domain 6 405 5.1E-134 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Gene3D G3DSA:3.90.1440.10 230 371 1.8E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Gene3D G3DSA:1.10.3060.10 658 841 2.0E-54 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Gene3D G3DSA:3.40.50.300 3 228 1.0E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Gene3D G3DSA:3.40.50.300 372 419 1.0E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SUPERFAMILY SSF52540 371 418 7.89E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SUPERFAMILY SSF52540 5 228 7.89E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SMART SM00957 6 405 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Pfam PF02810 SEC-C motif 914 932 1.7E-10 T 22-04-2016 IPR004027 SEC-C motif RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 828 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 20.013 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SUPERFAMILY SSF81767 227 371 1.06E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SMART SM00958 228 361 3.5E-79 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 ProSitePatterns PS01312 SecA family signature. 503 518 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PANTHER PTHR30612 560 934 0.0 T 22-04-2016 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PANTHER PTHR30612 5 523 0.0 T 22-04-2016 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 416 429 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 63 87 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 379 396 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 170 190 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 342 364 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 117 127 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 PRINTS PR00906 SecA protein signature 101 115 3.6E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Gene3D G3DSA:3.40.50.300 421 629 1.2E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Pfam PF01043 SecA preprotein cross-linking domain 233 361 2.2E-37 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SUPERFAMILY SSF81886 910 922 2.22E-77 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 SUPERFAMILY SSF81886 632 850 2.22E-77 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC_RS15175 ae9a45fe1bcbb349ce60acf56eae3b92 934 Pfam PF07516 SecA Wing and Scaffold domain 627 839 4.9E-63 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 89 1.7E-42 T 22-04-2016 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 PRINTS PR00946 Mercury scavenger protein signature 61 75 2.6E-46 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 PRINTS PR00946 Mercury scavenger protein signature 75 89 2.6E-46 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 PRINTS PR00946 Mercury scavenger protein signature 19 30 2.6E-46 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 PRINTS PR00946 Mercury scavenger protein signature 1 19 2.6E-46 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 PRINTS PR00946 Mercury scavenger protein signature 46 61 2.6E-46 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 PRINTS PR00946 Mercury scavenger protein signature 30 46 2.6E-46 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 Pfam PF00403 Heavy-metal-associated domain 24 84 2.0E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 ProSitePatterns PS01047 Heavy-metal-associated domain. 27 56 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 Gene3D G3DSA:3.30.70.100 20 87 1.1E-23 T 22-04-2016 RPIC_RS08755 0831feef4126e987c048e411928b0532 90 SUPERFAMILY SSF55008 16 88 2.36E-22 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 PIRSF PIRSF001423 5 572 4.1E-293 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 ProSitePatterns PS01233 Urocanase signature. 458 473 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 Pfam PF01175 Urocanase 22 563 4.4E-255 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 SUPERFAMILY SSF111326 15 571 4.58E-255 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 Gene3D G3DSA:3.40.50.10730 152 365 8.2E-92 T 22-04-2016 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 Gene3D G3DSA:3.40.1770.10 376 571 3.7E-160 T 22-04-2016 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 Gene3D G3DSA:3.40.1770.10 19 151 3.7E-160 T 22-04-2016 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 TIGRFAM TIGR01228 hutU: urocanate hydratase 20 570 7.4E-288 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 Hamap MF_00577 Urocanate hydratase [hutU]. 5 572 50.352 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 PANTHER PTHR12216 15 571 0.0 T 22-04-2016 RPIC_RS14195 8d09737465fc6a370b56deb908111bb4 572 PANTHER PTHR12216:SF3 15 571 0.0 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 ProSitePatterns PS00079 Multicopper oxidases signature 1. 636 656 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 Gene3D G3DSA:2.60.40.420 539 658 2.4E-34 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 SUPERFAMILY SSF49503 206 415 2.09E-53 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 PANTHER PTHR11709:SF33 87 246 4.6E-99 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 PANTHER PTHR11709:SF33 287 403 4.6E-99 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 PANTHER PTHR11709:SF33 516 658 4.6E-99 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 47 658 2.1E-256 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 Pfam PF07732 Multicopper oxidase 92 202 3.2E-37 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 Pfam PF07731 Multicopper oxidase 541 658 6.2E-26 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 Pfam PF00394 Multicopper oxidase 212 387 3.0E-28 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 PANTHER PTHR11709 87 246 4.6E-99 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 PANTHER PTHR11709 287 403 4.6E-99 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 PANTHER PTHR11709 516 658 4.6E-99 T 22-04-2016 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 ProSitePatterns PS00080 Multicopper oxidases signature 2. 641 652 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 SUPERFAMILY SSF49503 79 227 7.16E-39 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 SUPERFAMILY SSF49503 504 658 8.75E-36 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 Gene3D G3DSA:2.60.40.420 84 206 1.1E-30 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09070 fd3a596834aa7ad29a9bf97100789aeb 659 Gene3D G3DSA:2.60.40.420 210 417 1.4E-47 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS01770 487be836a04c5eb162850e8d89f85cce 276 PANTHER PTHR11907:SF10 1 267 4.2E-100 T 22-04-2016 RPIC_RS01770 487be836a04c5eb162850e8d89f85cce 276 Gene3D G3DSA:3.60.20.10 1 254 1.3E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS01770 487be836a04c5eb162850e8d89f85cce 276 Pfam PF13230 Glutamine amidotransferases class-II 1 266 3.0E-128 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RPIC_RS01770 487be836a04c5eb162850e8d89f85cce 276 PANTHER PTHR11907 1 267 4.2E-100 T 22-04-2016 RPIC_RS01770 487be836a04c5eb162850e8d89f85cce 276 SUPERFAMILY SSF56235 2 252 1.2E-44 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.0E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 Gene3D G3DSA:3.10.430.100 60 147 4.0E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 PANTHER PTHR21368 1 145 8.5E-45 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.2E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 SUPERFAMILY SSF55653 60 147 3.27E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 SUPERFAMILY SSF55658 1 56 5.06E-18 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 Gene3D G3DSA:3.40.5.10 1 52 8.4E-24 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 6.9E-45 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05885 3be88a1ee4060cb41de9ca6b527f5005 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.648 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 SUPERFAMILY SSF142695 204 363 2.48E-43 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.286 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 PANTHER PTHR21327 1 359 4.9E-139 T 22-04-2016 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 PANTHER PTHR21327:SF6 1 359 4.9E-139 T 22-04-2016 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 3.9E-84 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 Pfam PF00925 GTP cyclohydrolase II 207 361 2.6E-31 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 3.3E-77 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 Gene3D G3DSA:3.90.870.10 1 211 2.4E-100 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 SUPERFAMILY SSF55821 3 202 2.29E-87 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain RPIC_RS03235 4e4e0f7d6487d341fc8a6373f5b09085 379 PIRSF PIRSF001259 1 371 3.1E-117 T 22-04-2016 RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 Gene3D G3DSA:1.10.3810.10 129 344 7.7E-10 T 22-04-2016 RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 SUPERFAMILY SSF56601 718 986 9.92E-24 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 Pfam PF00912 Transglycosylase 125 332 1.0E-28 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 SUPERFAMILY SSF56601 474 518 2.08E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 SUPERFAMILY SSF56601 573 604 2.08E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 SUPERFAMILY SSF56601 665 679 2.08E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 SUPERFAMILY SSF56601 863 912 2.08E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 Gene3D G3DSA:3.40.710.10 374 496 5.7E-19 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 Gene3D G3DSA:3.40.710.10 543 625 5.7E-19 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 Gene3D G3DSA:3.40.710.10 783 985 2.2E-21 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 Gene3D G3DSA:3.40.710.10 659 679 5.7E-19 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS06745 82c5ee1a8c3b602f2bd0b1ab698e2252 1008 SUPERFAMILY SSF53955 119 357 1.32E-11 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS15655 b4fa075c3bf981c9a54edbdaafd6be93 394 SUPERFAMILY SSF116734 214 383 1.21E-20 T 22-04-2016 RPIC_RS15655 b4fa075c3bf981c9a54edbdaafd6be93 394 Pfam PF01420 Type I restriction modification DNA specificity domain 258 372 6.7E-5 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RPIC_RS15655 b4fa075c3bf981c9a54edbdaafd6be93 394 Pfam PF01420 Type I restriction modification DNA specificity domain 67 174 1.6E-4 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RPIC_RS15655 b4fa075c3bf981c9a54edbdaafd6be93 394 SUPERFAMILY SSF116734 13 190 2.45E-19 T 22-04-2016 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 Gene3D G3DSA:3.90.25.10 171 311 7.1E-33 T 22-04-2016 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 2.8E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 PANTHER PTHR10366 2 265 1.1E-98 T 22-04-2016 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 PANTHER PTHR10366 281 329 1.1E-98 T 22-04-2016 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 Gene3D G3DSA:3.40.50.720 1 170 5.4E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 PANTHER PTHR10366:SF469 2 265 1.1E-98 T 22-04-2016 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 PANTHER PTHR10366:SF469 281 329 1.1E-98 T 22-04-2016 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 SUPERFAMILY SSF51735 1 329 1.77E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 59.465 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RPIC_RS03845 08e099722853eae29984e7fcf181b750 331 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 328 4.5E-137 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 Gene3D G3DSA:3.40.50.1860 6 175 1.4E-54 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 PANTHER PTHR21198 1 265 2.0E-96 T 22-04-2016 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 Hamap MF_00258 Glutamate racemase [murI]. 7 257 36.522 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 PANTHER PTHR21198:SF2 1 265 2.0E-96 T 22-04-2016 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 247 1.8E-64 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 SUPERFAMILY SSF53681 112 256 3.76E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 216 8.9E-38 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 SUPERFAMILY SSF53681 8 109 9.16E-35 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 73 81 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS10345 0cd87959b1d67a206e7bc346dcac67d5 282 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 182 192 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS12200 9a15306e4092f08064843c7bbc14dea5 959 PIRSF PIRSF029570 4 959 0.0 T 22-04-2016 IPR016925 Uncharacterised conserved protein UCP029570 RPIC_RS12200 9a15306e4092f08064843c7bbc14dea5 959 SUPERFAMILY SSF51445 44 298 3.16E-49 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC_RS12200 9a15306e4092f08064843c7bbc14dea5 959 SUPERFAMILY SSF88713 538 652 5.4E-5 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS12200 9a15306e4092f08064843c7bbc14dea5 959 SUPERFAMILY SSF88713 725 790 5.4E-5 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS12200 9a15306e4092f08064843c7bbc14dea5 959 Pfam PF03537 Glycoside-hydrolase family GH114 54 286 1.2E-23 T 22-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain RPIC_RS12200 9a15306e4092f08064843c7bbc14dea5 959 PANTHER PTHR35882 87 809 8.5E-31 T 22-04-2016 RPIC_RS02070 573b0779e115740297a6bf370959478c 298 Pfam PF05726 Pirin C-terminal cupin domain 185 298 3.6E-34 T 22-04-2016 IPR008778 Pirin, C-terminal domain RPIC_RS02070 573b0779e115740297a6bf370959478c 298 PANTHER PTHR13903:SF8 8 297 1.8E-135 T 22-04-2016 RPIC_RS02070 573b0779e115740297a6bf370959478c 298 SUPERFAMILY SSF51182 13 297 8.9E-90 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS02070 573b0779e115740297a6bf370959478c 298 PANTHER PTHR13903 8 297 1.8E-135 T 22-04-2016 IPR012093 Pirin RPIC_RS02070 573b0779e115740297a6bf370959478c 298 PIRSF PIRSF006232 11 298 5.8E-104 T 22-04-2016 IPR012093 Pirin RPIC_RS02070 573b0779e115740297a6bf370959478c 298 Pfam PF02678 Pirin 30 130 6.8E-36 T 22-04-2016 IPR003829 Pirin, N-terminal domain RPIC_RS02070 573b0779e115740297a6bf370959478c 298 Gene3D G3DSA:2.60.120.10 13 271 5.0E-87 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS07980 9ff66f83dd6bfa1c1ebe033baa43c288 354 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 35 150 3.0E-4 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS07980 9ff66f83dd6bfa1c1ebe033baa43c288 354 PANTHER PTHR13779 27 203 3.9E-13 T 22-04-2016 RPIC_RS07980 9ff66f83dd6bfa1c1ebe033baa43c288 354 PANTHER PTHR13779:SF23 27 203 3.9E-13 T 22-04-2016 RPIC_RS07980 9ff66f83dd6bfa1c1ebe033baa43c288 354 Gene3D G3DSA:3.40.50.300 28 172 4.5E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07980 9ff66f83dd6bfa1c1ebe033baa43c288 354 SUPERFAMILY SSF52540 28 172 1.51E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07980 9ff66f83dd6bfa1c1ebe033baa43c288 354 SMART SM00382 31 177 0.0011 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15955 0561710c4f8a94aebd4d093a97dda5d7 78 Gene3D G3DSA:3.30.300.90 2 77 1.2E-30 T 22-04-2016 IPR002634 BolA protein RPIC_RS15955 0561710c4f8a94aebd4d093a97dda5d7 78 PANTHER PTHR12735 4 77 3.0E-21 T 22-04-2016 RPIC_RS15955 0561710c4f8a94aebd4d093a97dda5d7 78 Pfam PF01722 BolA-like protein 20 75 1.9E-20 T 22-04-2016 IPR002634 BolA protein RPIC_RS15955 0561710c4f8a94aebd4d093a97dda5d7 78 SUPERFAMILY SSF82657 1 77 1.57E-29 T 22-04-2016 IPR002634 BolA protein RPIC_RS15955 0561710c4f8a94aebd4d093a97dda5d7 78 PIRSF PIRSF003113 1 78 5.5E-25 T 22-04-2016 IPR002634 BolA protein RPIC_RS15955 0561710c4f8a94aebd4d093a97dda5d7 78 PANTHER PTHR12735:SF27 4 77 3.0E-21 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82866 292 510 8.76E-34 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.70.1430 572 659 6.7E-7 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063:SF12 2 415 0.0 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063:SF12 439 1038 0.0 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82866 817 1043 3.14E-51 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063 2 415 0.0 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063 439 1038 0.0 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 46 128 1.06E-15 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 571 658 1.41E-8 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82714 183 264 8.76E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 5.6E-240 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 268 326 6.54E-14 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 147 181 6.54E-14 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1042 1.8E-265 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.70.1430 45 129 5.9E-16 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:1.10.3850.10 823 1040 2.4E-55 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:1.10.3850.10 274 512 6.1E-50 T 22-04-2016 RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.2090.10 727 817 9.8E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.2090.10 181 265 1.5E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS14495 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82714 728 818 1.57E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 556 573 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.0E-15 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82866 292 510 8.76E-34 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.70.1430 572 659 6.7E-7 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063:SF12 2 415 0.0 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063:SF12 439 1038 0.0 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82866 817 1043 3.14E-51 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063 2 415 0.0 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 PANTHER PTHR32063 439 1038 0.0 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 46 128 1.06E-15 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 571 658 1.41E-8 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82714 183 264 8.76E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Pfam PF00873 AcrB/AcrD/AcrF family 6 1038 5.6E-240 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 268 326 6.54E-14 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82693 147 181 6.54E-14 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 2 1042 1.8E-265 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.70.1430 45 129 5.9E-16 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:1.10.3850.10 823 1040 2.4E-55 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:1.10.3850.10 274 512 6.1E-50 T 22-04-2016 RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.2090.10 727 817 9.8E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 Gene3D G3DSA:3.30.2090.10 181 265 1.5E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08220 8c26f23d03a64283933ad743f3075b64 1054 SUPERFAMILY SSF82714 728 818 1.57E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Gene3D G3DSA:2.160.10.10 239 328 7.5E-17 T 22-04-2016 RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 PANTHER PTHR22572:SF115 2 445 1.9E-205 T 22-04-2016 RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 PANTHER PTHR22572 2 445 1.9E-205 T 22-04-2016 RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 2 450 3.6E-189 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 SUPERFAMILY SSF53448 2 248 6.99E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 41.168 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Gene3D G3DSA:2.160.10.10 329 452 6.2E-33 T 22-04-2016 RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 SUPERFAMILY SSF51161 250 434 1.83E-49 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Gene3D G3DSA:3.90.550.10 2 238 5.8E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 425 3.6E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 8.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 295 4.0E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS00290 cb5fb27768de6d69513712814217f5e1 455 Pfam PF12804 MobA-like NTP transferase domain 4 128 6.0E-21 T 22-04-2016 IPR025877 MobA-like NTP transferase RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 102 5.9E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 PANTHER PTHR33909 1 108 4.6E-31 T 22-04-2016 RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 PANTHER PTHR33909:SF1 1 108 4.6E-31 T 22-04-2016 RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 Pfam PF02699 Preprotein translocase subunit 23 99 5.4E-32 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 SMART SM01323 20 102 1.8E-47 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 2.4E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC_RS14565 bffdd89a008ec475225ecfa59a3eb534 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 2.4E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC RPIC_RS16270 a7e3dade5d2be9055508267c4a1da30f 104 Gene3D G3DSA:3.30.70.330 10 101 2.5E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 RPIC_RS16270 a7e3dade5d2be9055508267c4a1da30f 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.772 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16270 a7e3dade5d2be9055508267c4a1da30f 104 SUPERFAMILY SSF54189 8 97 8.99E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16270 a7e3dade5d2be9055508267c4a1da30f 104 Pfam PF00276 Ribosomal protein L23 13 99 1.6E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16270 a7e3dade5d2be9055508267c4a1da30f 104 PANTHER PTHR11620 12 97 6.8E-25 T 22-04-2016 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PANTHER PTHR11732:SF100 4 268 1.6E-161 T 22-04-2016 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PRINTS PR00069 Aldo-keto reductase signature 26 50 5.8E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PRINTS PR00069 Aldo-keto reductase signature 187 211 5.8E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PRINTS PR00069 Aldo-keto reductase signature 150 179 5.8E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PRINTS PR00069 Aldo-keto reductase signature 82 100 5.8E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PRINTS PR00069 Aldo-keto reductase signature 115 132 5.8E-46 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 Pfam PF00248 Aldo/keto reductase family 9 252 1.3E-49 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 Gene3D G3DSA:3.20.20.100 3 259 1.7E-92 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PIRSF PIRSF000097 1 266 3.8E-71 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 SUPERFAMILY SSF51430 3 258 3.14E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 PANTHER PTHR11732 4 268 1.6E-161 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RPIC_RS13280 3bc57efd2bdaab420713183b002145e5 268 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Gene3D G3DSA:2.30.38.10 416 498 7.6E-6 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Gene3D G3DSA:3.30.300.30 499 612 1.4E-24 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 ProSitePatterns PS00455 Putative AMP-binding domain signature. 240 251 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Gene3D G3DSA:3.40.50.980 245 400 2.3E-27 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 PANTHER PTHR24095:SF165 1 630 0.0 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 7 61 5.4E-23 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Pfam PF13193 AMP-binding enzyme C-terminal domain 513 596 3.8E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Gene3D G3DSA:3.40.50.980 58 244 4.4E-39 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 PANTHER PTHR24095 1 630 0.0 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 Pfam PF00501 AMP-binding enzyme 64 504 8.3E-84 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 SUPERFAMILY SSF56801 7 620 4.45E-158 T 22-04-2016 RPIC_RS10030 4b3962676d2c0d43f450a673f93d0ef3 633 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 6 630 0.0 T 22-04-2016 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747|UniPathway: UPA00946 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 387 8.9E-156 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 PIRSF PIRSF006205 1 392 8.6E-155 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.7E-45 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 232 1.4E-38 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 385 47.581 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 Gene3D G3DSA:3.40.50.720 2 150 7.5E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 SUPERFAMILY SSF69055 296 387 7.19E-32 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 PANTHER PTHR30525 1 396 6.7E-218 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 Gene3D G3DSA:1.10.1740.10 306 387 9.2E-31 T 22-04-2016 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 SUPERFAMILY SSF55347 126 267 3.92E-61 T 22-04-2016 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 264 380 1.5E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS06380 814fe119a40b4d17f9f1d10a0437774c 396 SUPERFAMILY SSF51735 3 150 5.71E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04760 bf91259cf404dbe2f2a1fb82eef9767e 494 PIRSF PIRSF005522 2 494 3.2E-239 T 22-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 RPIC_RS04760 bf91259cf404dbe2f2a1fb82eef9767e 494 PANTHER PTHR34595 31 494 5.6E-299 T 22-04-2016 RPIC_RS04760 bf91259cf404dbe2f2a1fb82eef9767e 494 SUPERFAMILY SSF56059 33 233 8.22E-68 T 22-04-2016 RPIC_RS04760 bf91259cf404dbe2f2a1fb82eef9767e 494 SUPERFAMILY SSF56059 340 485 8.22E-68 T 22-04-2016 RPIC_RS04760 bf91259cf404dbe2f2a1fb82eef9767e 494 Pfam PF14403 Circularly permuted ATP-grasp type 2 95 470 2.8E-168 T 22-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 RPIC_RS04760 bf91259cf404dbe2f2a1fb82eef9767e 494 PANTHER PTHR34595:SF3 31 494 5.6E-299 T 22-04-2016 RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 SMART SM00382 40 227 3.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 PANTHER PTHR24220 17 248 5.4E-119 T 22-04-2016 RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 Gene3D G3DSA:3.40.50.300 12 216 3.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 SUPERFAMILY SSF52540 16 223 3.84E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 Pfam PF00005 ABC transporter 31 164 2.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06045 a9d52c19519b9e5b3aca685ea8951cc3 279 PANTHER PTHR24220:SF365 17 248 5.4E-119 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 RPIC_RS05575 abf4c51a5e29e4d806bd00c7ffa9b66e 275 Gene3D G3DSA:3.30.420.10 111 266 2.7E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS05575 abf4c51a5e29e4d806bd00c7ffa9b66e 275 PANTHER PTHR32552:SF23 64 273 8.1E-94 T 22-04-2016 RPIC_RS05575 abf4c51a5e29e4d806bd00c7ffa9b66e 275 SUPERFAMILY SSF53098 112 267 8.04E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS05575 abf4c51a5e29e4d806bd00c7ffa9b66e 275 Pfam PF00665 Integrase core domain 115 229 1.6E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS05575 abf4c51a5e29e4d806bd00c7ffa9b66e 275 PANTHER PTHR32552 64 273 8.1E-94 T 22-04-2016 RPIC_RS05050 abf4c51a5e29e4d806bd00c7ffa9b66e 275 Gene3D G3DSA:3.30.420.10 111 266 2.7E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS05050 abf4c51a5e29e4d806bd00c7ffa9b66e 275 PANTHER PTHR32552:SF23 64 273 8.1E-94 T 22-04-2016 RPIC_RS05050 abf4c51a5e29e4d806bd00c7ffa9b66e 275 SUPERFAMILY SSF53098 112 267 8.04E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS05050 abf4c51a5e29e4d806bd00c7ffa9b66e 275 Pfam PF00665 Integrase core domain 115 229 1.6E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS05050 abf4c51a5e29e4d806bd00c7ffa9b66e 275 PANTHER PTHR32552 64 273 8.1E-94 T 22-04-2016 RPIC_RS17945 abf4c51a5e29e4d806bd00c7ffa9b66e 275 Gene3D G3DSA:3.30.420.10 111 266 2.7E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS17945 abf4c51a5e29e4d806bd00c7ffa9b66e 275 PANTHER PTHR32552:SF23 64 273 8.1E-94 T 22-04-2016 RPIC_RS17945 abf4c51a5e29e4d806bd00c7ffa9b66e 275 SUPERFAMILY SSF53098 112 267 8.04E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS17945 abf4c51a5e29e4d806bd00c7ffa9b66e 275 Pfam PF00665 Integrase core domain 115 229 1.6E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS17945 abf4c51a5e29e4d806bd00c7ffa9b66e 275 PANTHER PTHR32552 64 273 8.1E-94 T 22-04-2016 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 Pfam PF01411 tRNA synthetases class II (A) 5 560 4.2E-214 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 SUPERFAMILY SSF101353 257 466 2.09E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 SUPERFAMILY SSF50447 459 558 2.68E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 SUPERFAMILY SSF55681 2 256 3.73E-103 T 22-04-2016 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 SUPERFAMILY SSF55186 558 713 7.98E-49 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 SMART SM00863 659 701 4.9E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 859 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 Gene3D G3DSA:3.30.930.10 1 252 1.8E-118 T 22-04-2016 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PANTHER PTHR11777 1 880 0.0 T 22-04-2016 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 880 201.38 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 659 701 1.5E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.9E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 283 299 1.9E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 307 320 1.9E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 1.9E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PRINTS PR00980 Alanyl-tRNA synthetase signature 237 250 1.9E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 PANTHER PTHR11777:SF9 1 880 0.0 T 22-04-2016 RPIC_RS03650 28a567a6418d3486333a2a51938ccf2a 880 Pfam PF02272 DHHA1 domain 806 872 5.2E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 Gene3D G3DSA:3.40.50.10090 157 254 1.2E-10 T 22-04-2016 RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 PANTHER PTHR38042 22 293 3.9E-40 T 22-04-2016 RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 PANTHER PTHR38042:SF1 22 293 3.9E-40 T 22-04-2016 RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 360 696 1.8E-40 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 SUPERFAMILY SSF69618 28 280 1.83E-47 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 Pfam PF02602 Uroporphyrinogen-III synthase HemD 41 268 5.7E-35 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 RPIC_RS12655 fc7ad30c522f862fc4fe8f9da9c598ba 702 Gene3D G3DSA:3.40.50.10090 31 127 1.7E-17 T 22-04-2016 RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 PANTHER PTHR30097:SF3 52 399 6.5E-71 T 22-04-2016 RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 Gene3D G3DSA:2.40.50.100 212 244 1.4E-10 T 22-04-2016 RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 Gene3D G3DSA:2.40.50.100 96 128 1.4E-10 T 22-04-2016 RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 SUPERFAMILY SSF111369 94 326 6.67E-22 T 22-04-2016 RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 384 2.0E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 319 1.3E-50 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS08215 e420530c797906058189638bacc7f1c8 406 PANTHER PTHR30097 52 399 6.5E-71 T 22-04-2016 RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 PANTHER PTHR30097:SF3 52 399 6.5E-71 T 22-04-2016 RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 Gene3D G3DSA:2.40.50.100 212 244 1.4E-10 T 22-04-2016 RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 Gene3D G3DSA:2.40.50.100 96 128 1.4E-10 T 22-04-2016 RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 SUPERFAMILY SSF111369 94 326 6.67E-22 T 22-04-2016 RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 384 2.0E-41 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 319 1.3E-50 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS14500 e420530c797906058189638bacc7f1c8 406 PANTHER PTHR30097 52 399 6.5E-71 T 22-04-2016 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 PIRSF PIRSF039088 1 513 8.8E-240 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 3.8E-250 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Gene3D G3DSA:2.40.30.20 1 93 9.6E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 SUPERFAMILY SSF52540 96 381 2.16E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.5E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Gene3D G3DSA:3.40.50.300 94 382 2.2E-115 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 PANTHER PTHR15184 1 497 8.8E-294 T 22-04-2016 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 SUPERFAMILY SSF50615 10 94 5.3E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.522 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 PANTHER PTHR15184:SF3 1 497 8.8E-294 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 SUPERFAMILY SSF47917 383 510 5.76E-48 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 3.6E-16 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Gene3D G3DSA:1.20.150.20 383 510 3.7E-50 T 22-04-2016 RPIC_RS17415 020a1c48d4e4ecb31cee7e752cc279f8 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 6.8E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 Gene3D G3DSA:3.30.465.10 88 242 5.9E-54 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 PANTHER PTHR21071:SF6 4 342 5.0E-142 T 22-04-2016 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 342 3.4E-32 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 Gene3D G3DSA:3.90.78.10 243 342 2.3E-39 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 82.075 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 PANTHER PTHR21071 4 342 5.0E-142 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 SUPERFAMILY SSF56194 215 342 8.5E-43 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 SUPERFAMILY SSF56176 8 199 1.42E-43 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 338 5.8E-64 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 Pfam PF01565 FAD binding domain 23 157 2.1E-19 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS13925 a02e2b14ad83b636f657c117f95d1adb 342 Gene3D G3DSA:3.30.43.10 8 72 3.7E-23 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 SMART SM00878 346 450 3.5E-53 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 618 635 - T 22-04-2016 IPR001882 Biotin-binding site RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 SUPERFAMILY SSF52440 5 119 7.91E-45 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Pfam PF00289 Biotin carboxylase, N-terminal domain 8 115 3.5E-41 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Gene3D G3DSA:3.40.50.20 8 135 8.9E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 1.7E-73 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Gene3D G3DSA:3.30.1490.20 136 207 9.6E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Gene3D G3DSA:3.30.470.20 211 454 1.8E-95 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Gene3D G3DSA:2.40.50.100 591 662 1.1E-22 T 22-04-2016 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Pfam PF02785 Biotin carboxylase C-terminal domain 346 451 4.5E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 Pfam PF00364 Biotin-requiring enzyme 596 661 5.1E-15 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 PANTHER PTHR18866:SF102 8 662 4.6E-288 T 22-04-2016 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 PANTHER PTHR18866 8 662 4.6E-288 T 22-04-2016 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 SUPERFAMILY SSF56059 121 332 2.65E-64 T 22-04-2016 RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 SUPERFAMILY SSF51246 341 454 7.85E-38 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS00515 52c9689f6294bd248fc207c02ce6ca23 664 SUPERFAMILY SSF51230 589 661 3.8E-19 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 SMART SM00937 30 140 4.0E-56 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 Gene3D G3DSA:1.20.58.410 1 61 1.7E-10 T 22-04-2016 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 SUPERFAMILY SSF75620 3 307 3.66E-122 T 22-04-2016 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 PANTHER PTHR11075 3 308 2.2E-145 T 22-04-2016 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 PANTHER PTHR11075:SF6 3 308 2.2E-145 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 308 3.5E-140 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 Pfam PF00472 RF-1 domain 174 282 5.6E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 Gene3D G3DSA:3.30.160.20 173 250 4.3E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RPIC_RS04400 8d1658ad259fb54ebc056b4c8ce8dc4e 310 Pfam PF03462 PCRF domain 3 165 2.0E-45 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 Pfam PF01546 Peptidase family M20/M25/M40 128 417 1.3E-22 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 PANTHER PTHR11014 76 467 6.1E-102 T 22-04-2016 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 SUPERFAMILY SSF53187 363 463 3.14E-73 T 22-04-2016 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 SUPERFAMILY SSF53187 61 261 3.14E-73 T 22-04-2016 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 Gene3D G3DSA:3.40.630.10 363 464 1.4E-85 T 22-04-2016 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 Gene3D G3DSA:3.40.630.10 53 242 1.4E-85 T 22-04-2016 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 Gene3D G3DSA:3.30.70.360 246 362 5.8E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 SUPERFAMILY SSF55031 248 348 5.36E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 PANTHER PTHR11014:SF63 76 467 6.1E-102 T 22-04-2016 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 75 421 3.7E-84 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 Pfam PF07687 Peptidase dimerisation domain 247 341 3.1E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS13685 aaabf5efaf4d44736ac97268c6a5353f 471 PIRSF PIRSF005962 55 466 1.0E-95 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 RPIC_RS07220 afe4f47c21fcc58d0a37350d3edaf969 190 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.2E-61 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RPIC_RS07220 afe4f47c21fcc58d0a37350d3edaf969 190 PANTHER PTHR36917 1 186 2.0E-65 T 22-04-2016 RPIC_RS07220 afe4f47c21fcc58d0a37350d3edaf969 190 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.673 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RPIC_RS07220 afe4f47c21fcc58d0a37350d3edaf969 190 Pfam PF04279 Intracellular septation protein A 1 175 4.5E-72 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 RPIC_RS07220 afe4f47c21fcc58d0a37350d3edaf969 190 PANTHER PTHR36917:SF1 1 186 2.0E-65 T 22-04-2016 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 SUPERFAMILY SSF52540 348 583 2.61E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 367 380 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 Gene3D G3DSA:1.10.10.60 622 662 1.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 Pfam PF00158 Sigma-54 interaction domain 347 508 2.3E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 SUPERFAMILY SSF46689 552 663 6.45E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 SUPERFAMILY SSF55781 64 204 9.81E-7 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 Gene3D G3DSA:3.40.50.300 347 516 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 552 561 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 Pfam PF01590 GAF domain 82 203 1.1E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 SMART SM00382 363 529 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 PANTHER PTHR32071 296 663 2.4E-126 T 22-04-2016 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 630 647 2.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 647 667 2.8E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 Pfam PF02954 Bacterial regulatory protein, Fis family 624 663 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 430 445 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS12255 ff90e1c25faa4c5946580a84da2a5044 672 Gene3D G3DSA:1.10.8.60 524 588 5.4E-13 T 22-04-2016 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 472 492 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 273 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 639 659 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 205 218 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 321 336 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 681 710 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 820 846 1.7E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 Gene3D G3DSA:1.20.1440.90 350 475 2.2E-28 T 22-04-2016 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PANTHER PTHR30523:SF0 66 1001 0.0 T 22-04-2016 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 PANTHER PTHR30523 66 1001 0.0 T 22-04-2016 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 SUPERFAMILY SSF51621 77 1001 7.22E-303 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 68 1001 19.521 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 Pfam PF00311 Phosphoenolpyruvate carboxylase 203 1001 2.5E-296 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 641 653 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS12665 19d55ceb39dfceac549c1f25b9261a42 1001 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 206 217 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 RPIC_RS11825 4622b27765cedc0e9c96333720a856a6 257 PANTHER PTHR10859:SF99 4 147 1.9E-31 T 22-04-2016 RPIC_RS11825 4622b27765cedc0e9c96333720a856a6 257 Gene3D G3DSA:3.90.550.10 9 145 5.8E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS11825 4622b27765cedc0e9c96333720a856a6 257 Pfam PF00535 Glycosyl transferase family 2 11 147 5.6E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS11825 4622b27765cedc0e9c96333720a856a6 257 PANTHER PTHR10859 4 147 1.9E-31 T 22-04-2016 RPIC_RS11825 4622b27765cedc0e9c96333720a856a6 257 SUPERFAMILY SSF53448 4 152 3.56E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS03880 1daf7af13d19cd263b26be45054c565e 266 SUPERFAMILY SSF53850 30 266 3.55E-90 T 22-04-2016 RPIC_RS03880 1daf7af13d19cd263b26be45054c565e 266 Gene3D G3DSA:3.40.190.10 28 158 4.0E-58 T 22-04-2016 RPIC_RS03880 1daf7af13d19cd263b26be45054c565e 266 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 24 266 9.6E-78 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS03880 1daf7af13d19cd263b26be45054c565e 266 Pfam PF03180 NLPA lipoprotein 31 266 1.0E-94 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS03880 1daf7af13d19cd263b26be45054c565e 266 PANTHER PTHR30429 2 266 9.9E-132 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS03880 1daf7af13d19cd263b26be45054c565e 266 PIRSF PIRSF002854 3 266 2.4E-106 T 22-04-2016 IPR004872 Lipoprotein NlpA family RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 1.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PANTHER PTHR24322:SF513 17 181 8.0E-35 T 22-04-2016 RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 Gene3D G3DSA:3.40.50.720 12 235 3.4E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 176 0.0014 T 22-04-2016 RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 6.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 6.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 6.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 SUPERFAMILY SSF51735 13 234 1.68E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 PANTHER PTHR24322 17 181 8.0E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02730 23e8096b2a0f891b760bc94ad7016119 235 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 233 3.9E-40 T 22-04-2016 RPIC_RS11240 cf051712886304a127073b188575eb47 201 Gene3D G3DSA:3.90.950.10 1 197 4.7E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC_RS11240 cf051712886304a127073b188575eb47 201 SUPERFAMILY SSF52972 1 196 2.28E-68 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC_RS11240 cf051712886304a127073b188575eb47 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 195 5.1E-53 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC_RS11240 cf051712886304a127073b188575eb47 201 PANTHER PTHR11067:SF9 1 196 1.3E-72 T 22-04-2016 RPIC_RS11240 cf051712886304a127073b188575eb47 201 PANTHER PTHR11067 1 196 1.3E-72 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC_RS11240 cf051712886304a127073b188575eb47 201 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 197 47.881 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC_RS11240 cf051712886304a127073b188575eb47 201 Pfam PF01725 Ham1 family 4 193 3.1E-53 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 PANTHER PTHR23508 19 433 5.7E-157 T 22-04-2016 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 Pfam PF07690 Major Facilitator Superfamily 39 333 4.5E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 ProSitePatterns PS00216 Sugar transport proteins signature 1. 86 102 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 PANTHER PTHR23508:SF11 19 433 5.7E-157 T 22-04-2016 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 SUPERFAMILY SSF103473 23 436 6.8E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 Gene3D G3DSA:1.20.1250.20 23 228 6.1E-27 T 22-04-2016 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 Gene3D G3DSA:1.20.1250.20 252 439 1.2E-23 T 22-04-2016 RPIC_RS13745 86a7eb2841e965cfe0e09667f99ed978 443 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 Pfam PF00005 ABC transporter 20 169 1.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 Pfam PF00005 ABC transporter 272 425 5.0E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 Gene3D G3DSA:3.40.50.300 3 224 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 SUPERFAMILY SSF52540 4 223 7.27E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 PANTHER PTHR24220:SF516 6 378 4.5E-151 T 22-04-2016 RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 PANTHER PTHR24220 6 378 4.5E-151 T 22-04-2016 RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 Gene3D G3DSA:3.40.50.300 269 487 8.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 SMART SM00382 29 210 3.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 SMART SM00382 278 474 7.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14755 7a0155c8d088abb2c8b75fdbc4f3e5b4 511 SUPERFAMILY SSF52540 269 484 1.65E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14150 e9a8e1b1a2c139ae9a3e5cb6ca1c44e3 135 PANTHER PTHR30437:SF5 1 133 1.1E-37 T 22-04-2016 RPIC_RS14150 e9a8e1b1a2c139ae9a3e5cb6ca1c44e3 135 PANTHER PTHR30437 1 133 1.1E-37 T 22-04-2016 RPIC_RS14150 e9a8e1b1a2c139ae9a3e5cb6ca1c44e3 135 SUPERFAMILY SSF54534 49 124 8.37E-17 T 22-04-2016 RPIC_RS14150 e9a8e1b1a2c139ae9a3e5cb6ca1c44e3 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 123 8.8E-23 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC_RS14150 e9a8e1b1a2c139ae9a3e5cb6ca1c44e3 135 Gene3D G3DSA:3.10.50.30 47 133 3.8E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 PANTHER PTHR30557 133 163 0.0 T 22-04-2016 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 PANTHER PTHR30557 24 99 0.0 T 22-04-2016 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 PANTHER PTHR30557 198 634 0.0 T 22-04-2016 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 PANTHER PTHR30557:SF1 133 163 0.0 T 22-04-2016 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 PANTHER PTHR30557:SF1 24 99 0.0 T 22-04-2016 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 PANTHER PTHR30557:SF1 198 634 0.0 T 22-04-2016 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 Pfam PF01964 Radical SAM ThiC family 142 596 3.2E-199 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 140 599 2.2E-214 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 140 601 57.036 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC_RS18055 bc54ff0631360eaca804a2f8d9bcbae3 635 Pfam PF13667 ThiC-associated domain 25 101 2.5E-31 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 Gene3D G3DSA:3.30.420.40 4 136 1.6E-40 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 PANTHER PTHR30005 1 510 7.2E-134 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 PANTHER PTHR30005:SF4 1 510 7.2E-134 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 Pfam PF02541 Ppx/GppA phosphatase family 42 316 1.8E-68 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 SUPERFAMILY SSF53067 7 135 2.14E-30 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 315 5.7E-95 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 Gene3D G3DSA:3.30.420.150 141 320 7.8E-52 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 SUPERFAMILY SSF109604 322 510 8.27E-43 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 SUPERFAMILY SSF53067 142 319 4.83E-42 T 22-04-2016 RPIC_RS09935 9c3e9817b7e5b6c79f74aea80553e5c6 512 PIRSF PIRSF001267 1 512 4.3E-195 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 254 3.4E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 Pfam PF00005 ABC transporter 23 183 4.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 SUPERFAMILY SSF52540 6 254 2.46E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220:SF358 130 257 1.4E-111 T 22-04-2016 RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220:SF358 9 114 1.4E-111 T 22-04-2016 RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 SMART SM00382 32 238 5.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220 130 257 1.4E-111 T 22-04-2016 RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 PANTHER PTHR24220 9 114 1.4E-111 T 22-04-2016 RPIC_RS13330 fcc0d9a38235db0e9e8626fccf169a53 258 Gene3D G3DSA:3.40.50.300 3 254 4.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 SUPERFAMILY SSF52440 1 113 7.19E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 SUPERFAMILY SSF51246 331 444 1.67E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 Gene3D G3DSA:3.30.470.20 204 444 3.0E-99 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.8E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 PANTHER PTHR18866 1 446 1.5E-295 T 22-04-2016 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 6.7E-39 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 SUPERFAMILY SSF56059 83 348 2.19E-72 T 22-04-2016 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 SMART SM00878 336 441 3.6E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 Gene3D G3DSA:3.40.50.20 1 129 2.1E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 5.4E-226 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 Gene3D G3DSA:3.30.1490.20 130 203 6.1E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS14930 34f8a3634d101400a645b9cbbc79e3ac 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.7E-81 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 PANTHER PTHR11552:SF139 2 533 1.2E-71 T 22-04-2016 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 SUPERFAMILY SSF51905 207 323 7.0E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 SUPERFAMILY SSF51905 5 174 7.0E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 SUPERFAMILY SSF51905 476 535 7.0E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Pfam PF05199 GMC oxidoreductase 418 528 1.5E-19 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Pfam PF01266 FAD dependent oxidoreductase 8 40 6.5E-7 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Gene3D G3DSA:3.50.50.60 4 144 2.1E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Gene3D G3DSA:3.50.50.60 383 396 2.1E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Gene3D G3DSA:3.50.50.60 467 535 2.1E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Gene3D G3DSA:3.50.50.60 215 319 2.1E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 PANTHER PTHR11552 2 533 1.2E-71 T 22-04-2016 RPIC_RS03520 2285d3c887ebc7a3d7b06b9e2cfedeb4 536 Pfam PF00732 GMC oxidoreductase 233 318 3.5E-5 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 RPIC_RS06655 d41cfc9b504886b1c9bcbc4c0e7c7fb0 623 PANTHER PTHR31616:SF0 2 620 1.8E-183 T 22-04-2016 RPIC_RS06655 d41cfc9b504886b1c9bcbc4c0e7c7fb0 623 SUPERFAMILY SSF48208 223 609 1.26E-107 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RPIC_RS06655 d41cfc9b504886b1c9bcbc4c0e7c7fb0 623 Gene3D G3DSA:1.50.10.10 237 613 1.3E-84 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RPIC_RS06655 d41cfc9b504886b1c9bcbc4c0e7c7fb0 623 PANTHER PTHR31616 2 620 1.8E-183 T 22-04-2016 RPIC_RS06655 d41cfc9b504886b1c9bcbc4c0e7c7fb0 623 Pfam PF00723 Glycosyl hydrolases family 15 241 552 1.0E-59 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 PANTHER PTHR24423 6 14 1.2E-53 T 22-04-2016 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 PANTHER PTHR24423 193 494 1.2E-53 T 22-04-2016 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 Gene3D G3DSA:1.10.287.130 245 313 3.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 8.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 8.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 SUPERFAMILY SSF47384 235 315 6.47E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 SMART SM00387 365 495 9.7E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 Gene3D G3DSA:3.30.565.10 323 499 4.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 493 1.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 Pfam PF08521 Two-component sensor kinase N-terminal 26 174 5.6E-40 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 SUPERFAMILY SSF55874 307 493 3.01E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 Pfam PF00512 His Kinase A (phospho-acceptor) domain 253 315 2.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS15860 ad2245000bb6ccab99fdf927826ce92c 509 SMART SM00388 252 317 6.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 PANTHER PTHR11205 1 156 9.1E-85 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 PIRSF PIRSF002122 3 156 1.1E-58 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.1E-64 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 SUPERFAMILY SSF47973 2 149 3.92E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 Gene3D G3DSA:1.10.455.10 7 156 1.5E-64 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.05 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.0E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain RPIC_RS16300 9fffd9f557f9fc967d422fdd67f7df5c 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 Pfam PF00664 ABC transporter transmembrane region 17 287 4.3E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 SUPERFAMILY SSF52540 323 571 2.93E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 Pfam PF00005 ABC transporter 348 500 7.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 Gene3D G3DSA:3.40.50.300 331 563 1.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 SUPERFAMILY SSF90123 3 317 4.71E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 3 572 1.7E-264 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 PANTHER PTHR24221 1 571 1.2E-222 T 22-04-2016 RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 SMART SM00382 357 546 3.3E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS11810 0e141a278cc2e12816cbefc451b52bf2 574 Gene3D G3DSA:1.20.1560.10 3 317 7.8E-68 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Pfam PF13328 HD domain 112 261 3.3E-52 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 PANTHER PTHR21262 99 804 0.0 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Gene3D G3DSA:3.10.20.30 474 534 6.5E-21 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 SUPERFAMILY SSF81271 461 533 9.37E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 112 800 3.9E-223 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 SUPERFAMILY SSF55021 725 800 1.49E-8 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 SUPERFAMILY SSF81301 278 451 1.29E-59 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 SMART SM00954 321 431 5.8E-60 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Gene3D G3DSA:3.30.460.10 280 411 2.6E-44 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Pfam PF02824 TGS domain 474 533 9.5E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Pfam PF04607 Region found in RelA / SpoT proteins 321 431 1.5E-33 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Pfam PF13291 ACT domain 723 801 1.3E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 Gene3D G3DSA:3.30.70.260 726 799 5.1E-9 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 SUPERFAMILY SSF109604 97 275 6.91E-72 T 22-04-2016 RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 SMART SM00471 127 239 3.8E-10 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS11205 7373417ea8c4ede5cef7f79fa5ba0d01 806 PANTHER PTHR21262:SF0 99 804 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF55326 661 858 1.91E-64 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Gene3D G3DSA:3.30.1330.10 227 458 7.9E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Gene3D G3DSA:3.30.1330.10 687 852 4.4E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 8 1367 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF55326 237 464 2.23E-56 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1368 21.252 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF82697 4 164 1.52E-40 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SMART SM01211 1112 1367 7.7E-141 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1112 1367 5.4E-100 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 PANTHER PTHR10099:SF5 3 374 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 PANTHER PTHR10099:SF5 393 961 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 PANTHER PTHR10099:SF5 987 1368 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF52317 1108 1367 8.75E-87 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Gene3D G3DSA:3.40.50.880 1113 1332 3.4E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF56042 869 1105 2.09E-51 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 PANTHER PTHR10099 3 374 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 PANTHER PTHR10099 393 961 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 PANTHER PTHR10099 987 1368 0.0 T 22-04-2016 RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF56042 469 697 2.84E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Pfam PF02769 AIR synthase related protein, C-terminal domain 469 626 2.5E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 Pfam PF02769 AIR synthase related protein, C-terminal domain 885 1029 8.2E-11 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS09105 07519fef562a696b8e5f44be7e78b15c 1368 SUPERFAMILY SSF109736 178 236 3.66E-21 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Gene3D G3DSA:3.30.70.1430 569 670 1.0E-31 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PANTHER PTHR32063:SF13 1 1048 0.0 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Gene3D G3DSA:3.30.2090.10 722 806 1.3E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82866 296 497 2.09E-51 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82693 135 182 2.96E-24 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82693 274 330 2.96E-24 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82714 182 271 2.35E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PANTHER PTHR32063 1 1048 0.0 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Gene3D G3DSA:3.30.70.1430 38 140 6.0E-31 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82693 38 129 1.46E-22 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82693 566 670 6.54E-28 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Gene3D G3DSA:1.10.3850.10 279 498 3.1E-61 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Gene3D G3DSA:1.10.3850.10 814 1026 6.5E-54 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82866 806 1027 7.72E-42 T 22-04-2016 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.9E-107 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 Gene3D G3DSA:3.30.2090.10 181 274 8.7E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS04135 a932e869225ed400f9fead487940b96d 1051 SUPERFAMILY SSF82714 722 807 3.92E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 SMART SM00448 1 113 4.5E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 SUPERFAMILY SSF52172 1 176 9.96E-33 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 8.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 Gene3D G3DSA:1.10.10.10 130 225 2.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 PANTHER PTHR26402 1 223 4.0E-64 T 22-04-2016 RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 Gene3D G3DSA:3.40.50.2300 1 120 5.6E-32 T 22-04-2016 RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 Pfam PF00072 Response regulator receiver domain 3 113 8.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02080 068d66dbbdf3c204e8852d9e03239883 246 SMART SM00862 148 224 5.9E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 PANTHER PTHR30177:SF4 252 507 1.9E-80 T 22-04-2016 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 Gene3D G3DSA:3.40.190.10 251 299 3.4E-40 T 22-04-2016 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 Gene3D G3DSA:3.40.190.10 33 143 3.4E-40 T 22-04-2016 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 PANTHER PTHR30177 252 507 1.9E-80 T 22-04-2016 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 Gene3D G3DSA:1.10.3720.10 312 498 1.2E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 340 501 2.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 SUPERFAMILY SSF53850 34 299 2.05E-55 T 22-04-2016 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 SUPERFAMILY SSF161098 317 510 7.46E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 296 2.4E-53 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RPIC_RS13715 28ec6f1181cd60a0bbe65bf2abbd9e9f 518 Gene3D G3DSA:3.40.190.120 144 238 4.5E-29 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Gene3D G3DSA:3.30.390.30 432 549 2.9E-39 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Gene3D G3DSA:3.50.50.60 236 427 1.4E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 3.6E-91 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PANTHER PTHR22912:SF29 101 549 1.1E-122 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PIRSF PIRSF000350 1 561 1.2E-262 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Pfam PF00403 Heavy-metal-associated domain 5 62 1.4E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 PANTHER PTHR22912 101 549 1.1E-122 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 2.7E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 SUPERFAMILY SSF51905 100 155 2.13E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 SUPERFAMILY SSF51905 183 426 2.13E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 1.2E-186 T 22-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 1.4E-29 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 SUPERFAMILY SSF55008 2 68 1.44E-17 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Gene3D G3DSA:3.30.70.100 2 65 9.6E-21 T 22-04-2016 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 SUPERFAMILY SSF55424 436 559 7.04E-34 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC_RS08765 9dfe5d706de19e30d241d19b0ceca1d7 561 Gene3D G3DSA:3.50.50.60 100 235 7.2E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 PANTHER PTHR30093:SF4 14 75 1.9E-21 T 22-04-2016 RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.8E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 PANTHER PTHR30093 14 75 1.9E-21 T 22-04-2016 RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 35 3.6E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 Gene3D G3DSA:3.30.700.10 16 132 4.4E-18 T 22-04-2016 RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 1.6E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 1.6E-9 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 37 127 2.9E-20 T 22-04-2016 IPR031982 Type IV minor pilin ComP RPIC_RS14370 73a89ed5d969d7b850a4f9466f005880 145 SUPERFAMILY SSF54523 16 134 2.51E-24 T 22-04-2016 RPIC_RS14960 3cd9aca437dbac8eb86abad381ed6dd4 186 Pfam PF07382 Histone H1-like nucleoprotein HC2 1 185 2.8E-23 T 22-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 351 1.1E-146 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 SMART SM01329 3 352 1.6E-199 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 PANTHER PTHR11835:SF35 3 356 9.6E-192 T 22-04-2016 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 352 9.9E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 356 49.915 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 SUPERFAMILY SSF53659 2 356 1.46E-118 T 22-04-2016 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 Gene3D G3DSA:3.40.718.10 2 355 1.7E-124 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC_RS10535 1e29709292b06107bc0ac6087bf506ae 356 PANTHER PTHR11835 3 356 9.6E-192 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 RPIC_RS12330 d8e3ff44bf956b50832264fbb01f5570 309 PANTHER PTHR11935 56 230 4.1E-14 T 22-04-2016 RPIC_RS12330 d8e3ff44bf956b50832264fbb01f5570 309 SUPERFAMILY SSF56281 13 283 3.38E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12330 d8e3ff44bf956b50832264fbb01f5570 309 Pfam PF00753 Metallo-beta-lactamase superfamily 49 230 7.1E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12330 d8e3ff44bf956b50832264fbb01f5570 309 SMART SM00849 45 234 2.9E-10 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12330 d8e3ff44bf956b50832264fbb01f5570 309 Gene3D G3DSA:3.60.15.10 15 254 1.2E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 66 83 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 PANTHER PTHR11071:SF192 33 191 6.6E-57 T 22-04-2016 RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 SUPERFAMILY SSF50891 29 190 1.26E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 PANTHER PTHR11071 33 191 6.6E-57 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 32 188 2.0E-46 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 Gene3D G3DSA:2.40.100.10 29 191 2.8E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 6.1E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 83 6.1E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04975 11a6999a2ffe98905bff4144ff65601a 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 6.1E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 Gene3D G3DSA:3.10.129.10 188 294 2.5E-19 T 22-04-2016 IPR029069 HotDog domain RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 PANTHER PTHR13078 20 276 6.5E-34 T 22-04-2016 RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 PANTHER PTHR13078:SF54 20 276 6.5E-34 T 22-04-2016 RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 PRINTS PR01483 Fatty acid synthase signature 215 236 1.8E-7 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 PRINTS PR01483 Fatty acid synthase signature 193 215 1.8E-7 T 22-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 Pfam PF01575 MaoC like domain 195 245 1.8E-13 T 22-04-2016 IPR002539 MaoC-like domain RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 SUPERFAMILY SSF54637 188 295 1.64E-17 T 22-04-2016 IPR029069 HotDog domain RPIC_RS02040 542ceaa97223417479d7db8bb8e2b86f 306 SUPERFAMILY SSF54637 52 166 7.46E-9 T 22-04-2016 IPR029069 HotDog domain RPIC_RS03025 af8893c0bcb65c5c8468483fc9cca73b 172 PANTHER PTHR11608 33 168 1.3E-39 T 22-04-2016 RPIC_RS03025 af8893c0bcb65c5c8468483fc9cca73b 172 SUPERFAMILY SSF53271 11 148 1.02E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS03025 af8893c0bcb65c5c8468483fc9cca73b 172 Gene3D G3DSA:3.40.50.2020 8 150 1.9E-33 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS03025 af8893c0bcb65c5c8468483fc9cca73b 172 Pfam PF00156 Phosphoribosyl transferase domain 9 137 9.8E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 TIGRFAM TIGR00109 hemH: ferrochelatase 15 344 1.7E-93 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 Pfam PF00762 Ferrochelatase 16 343 8.0E-115 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 Hamap MF_00323 Ferrochelatase [hemH]. 15 344 38.372 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 ProSitePatterns PS00534 Ferrochelatase signature. 213 231 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 SUPERFAMILY SSF53800 14 351 7.06E-108 T 22-04-2016 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 PANTHER PTHR11108 15 345 4.9E-114 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 Gene3D G3DSA:3.40.50.1400 16 224 1.1E-69 T 22-04-2016 RPIC_RS14175 8522d819e02a91f67fdc9ed611788c71 371 Gene3D G3DSA:3.40.50.1400 225 345 1.1E-30 T 22-04-2016 RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 SMART SM00671 122 155 0.062 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 SMART SM00671 156 191 0.001 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 SMART SM00671 84 119 1.3E-4 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 SMART SM00671 48 83 1.3E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 Pfam PF08238 Sel1 repeat 33 47 54.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 Pfam PF08238 Sel1 repeat 50 83 1.5E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 Pfam PF08238 Sel1 repeat 123 155 2.7E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 Pfam PF08238 Sel1 repeat 161 191 0.0037 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 Pfam PF08238 Sel1 repeat 84 118 0.0035 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 PANTHER PTHR11102 33 202 4.7E-40 T 22-04-2016 RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 Gene3D G3DSA:1.25.40.10 32 217 2.1E-41 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS00475 4eab305ca7774adf87330ea2ff2bde52 256 SUPERFAMILY SSF81901 28 205 1.22E-35 T 22-04-2016 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 7.0E-50 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 PANTHER PTHR10986 2 115 5.3E-64 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 SUPERFAMILY SSF74731 2 115 9.81E-50 T 22-04-2016 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 Pfam PF00453 Ribosomal protein L20 3 109 1.4E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.4E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.4E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.4E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 22-04-2016 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 Gene3D G3DSA:1.10.1900.20 55 116 3.8E-31 T 22-04-2016 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS09705 6b418d46133b3e138cf6e72170c9b7e6 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.175 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 Pfam PF00005 ABC transporter 29 167 9.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 SUPERFAMILY SSF52540 22 220 1.24E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 PANTHER PTHR24220 7 216 9.5E-96 T 22-04-2016 RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 SMART SM00382 37 217 3.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 Gene3D G3DSA:3.40.50.300 2 216 6.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05180 28a282731a5348f6324678ea8a9bdc00 270 PANTHER PTHR24220:SF561 7 216 9.5E-96 T 22-04-2016 RPIC_RS09905 3b2ee364d81a034d0b0f9def7745e1a2 286 PANTHER PTHR11935:SF110 5 272 2.1E-111 T 22-04-2016 RPIC_RS09905 3b2ee364d81a034d0b0f9def7745e1a2 286 PANTHER PTHR11935 5 272 2.1E-111 T 22-04-2016 RPIC_RS09905 3b2ee364d81a034d0b0f9def7745e1a2 286 SMART SM00849 13 204 2.1E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS09905 3b2ee364d81a034d0b0f9def7745e1a2 286 Gene3D G3DSA:3.60.15.10 6 248 1.4E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS09905 3b2ee364d81a034d0b0f9def7745e1a2 286 Pfam PF00753 Metallo-beta-lactamase superfamily 11 204 8.9E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS09905 3b2ee364d81a034d0b0f9def7745e1a2 286 SUPERFAMILY SSF56281 6 251 1.9E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS09355 60a0a318b8cb656476e2bf456cc2d06d 353 PANTHER PTHR30547:SF0 12 350 1.1E-141 T 22-04-2016 RPIC_RS09355 60a0a318b8cb656476e2bf456cc2d06d 353 Pfam PF06250 Protein of unknown function (DUF1016) 29 340 4.9E-117 T 22-04-2016 IPR009362 Protein of unknown function DUF1016 RPIC_RS09355 60a0a318b8cb656476e2bf456cc2d06d 353 PANTHER PTHR30547 12 350 1.1E-141 T 22-04-2016 RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 Pfam PF00924 Mechanosensitive ion channel 517 713 4.4E-34 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 PANTHER PTHR30460:SF0 58 755 7.7E-83 T 22-04-2016 RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 SUPERFAMILY SSF82861 474 557 2.22E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 SUPERFAMILY SSF50182 559 621 5.23E-10 T 22-04-2016 IPR010920 LSM domain RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 Gene3D G3DSA:2.30.30.60 575 620 3.6E-8 T 22-04-2016 RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 PANTHER PTHR30460 58 755 7.7E-83 T 22-04-2016 RPIC_RS16580 e01459d353b345edb941a14bc4f1d56c 757 SUPERFAMILY SSF82689 622 723 1.83E-9 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 PANTHER PTHR30126:SF31 1 287 1.0E-91 T 22-04-2016 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 PANTHER PTHR30126 1 287 1.0E-91 T 22-04-2016 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 SUPERFAMILY SSF53850 86 288 2.51E-38 T 22-04-2016 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 Gene3D G3DSA:3.40.190.10 87 181 1.5E-19 T 22-04-2016 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 SUPERFAMILY SSF46785 1 109 1.04E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 Gene3D G3DSA:1.10.10.10 1 84 8.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 Gene3D G3DSA:3.40.190.10 182 260 2.8E-13 T 22-04-2016 RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 Pfam PF03466 LysR substrate binding domain 86 287 4.9E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS03680 2d343d1bca0064d51efaa9b7eaa4fbcc 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07105 54a7ecc4d5c672a170d8da1a6adfb2cf 382 Gene3D G3DSA:1.20.1090.10 184 382 2.7E-55 T 22-04-2016 RPIC_RS07105 54a7ecc4d5c672a170d8da1a6adfb2cf 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 373 2.1E-106 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 RPIC_RS07105 54a7ecc4d5c672a170d8da1a6adfb2cf 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RPIC_RS07105 54a7ecc4d5c672a170d8da1a6adfb2cf 382 SUPERFAMILY SSF56796 4 380 6.93E-112 T 22-04-2016 RPIC_RS07105 54a7ecc4d5c672a170d8da1a6adfb2cf 382 Gene3D G3DSA:3.40.50.1970 6 183 1.6E-52 T 22-04-2016 RPIC_RS07105 54a7ecc4d5c672a170d8da1a6adfb2cf 382 PANTHER PTHR11496 1 382 6.3E-95 T 22-04-2016 RPIC_RS06300 3c87664f18b133067aa10755e02e5ba3 306 Pfam PF00892 EamA-like transporter family 163 298 1.1E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS06300 3c87664f18b133067aa10755e02e5ba3 306 Pfam PF00892 EamA-like transporter family 20 148 1.2E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS06300 3c87664f18b133067aa10755e02e5ba3 306 PANTHER PTHR22911 18 306 2.4E-26 T 22-04-2016 RPIC_RS06300 3c87664f18b133067aa10755e02e5ba3 306 SUPERFAMILY SSF103481 220 302 1.83E-8 T 22-04-2016 RPIC_RS06300 3c87664f18b133067aa10755e02e5ba3 306 SUPERFAMILY SSF103481 56 151 1.96E-10 T 22-04-2016 RPIC_RS14830 cad78fcf1f3aa94ddfb6e0cb967cfe84 207 SUPERFAMILY SSF52038 108 200 2.35E-22 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RPIC_RS14830 cad78fcf1f3aa94ddfb6e0cb967cfe84 207 Gene3D G3DSA:3.30.370.10 107 200 7.3E-30 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RPIC_RS14830 cad78fcf1f3aa94ddfb6e0cb967cfe84 207 Pfam PF01337 Barstar (barnase inhibitor) 112 196 1.1E-25 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) RPIC_RS10220 1f5c13c785e15aacf72aec2a2df5617a 300 SUPERFAMILY SSF51197 100 223 1.48E-17 T 22-04-2016 RPIC_RS10220 1f5c13c785e15aacf72aec2a2df5617a 300 Gene3D G3DSA:2.60.120.330 124 223 3.8E-16 T 22-04-2016 IPR027443 Isopenicillin N synthase-like RPIC_RS10220 1f5c13c785e15aacf72aec2a2df5617a 300 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 70 223 7.3E-48 T 22-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 RPIC_RS10220 1f5c13c785e15aacf72aec2a2df5617a 300 PANTHER PTHR12366 13 244 7.7E-141 T 22-04-2016 RPIC_RS10220 1f5c13c785e15aacf72aec2a2df5617a 300 PANTHER PTHR12366:SF25 13 244 7.7E-141 T 22-04-2016 RPIC_RS14950 d7d27e37e34fde2f72ab6dfa1259e473 311 Gene3D G3DSA:3.40.1190.20 4 304 1.1E-57 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS14950 d7d27e37e34fde2f72ab6dfa1259e473 311 Pfam PF00294 pfkB family carbohydrate kinase 25 290 4.8E-43 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC_RS14950 d7d27e37e34fde2f72ab6dfa1259e473 311 PANTHER PTHR10584 1 303 5.3E-101 T 22-04-2016 RPIC_RS14950 d7d27e37e34fde2f72ab6dfa1259e473 311 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC_RS14950 d7d27e37e34fde2f72ab6dfa1259e473 311 SUPERFAMILY SSF53613 4 291 1.51E-65 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS14950 d7d27e37e34fde2f72ab6dfa1259e473 311 PANTHER PTHR10584:SF15 1 303 5.3E-101 T 22-04-2016 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 Gene3D G3DSA:1.20.140.10 232 392 2.3E-43 T 22-04-2016 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 389 8.4E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 SUPERFAMILY SSF47203 246 394 6.12E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 231 1.6E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 Gene3D G3DSA:2.40.110.10 135 231 1.7E-32 T 22-04-2016 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 SUPERFAMILY SSF56645 6 242 2.75E-79 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 349 368 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 PANTHER PTHR10909 4 396 2.5E-274 T 22-04-2016 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 20 132 1.1E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 Gene3D G3DSA:1.10.540.10 6 134 1.2E-43 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS03455 ab45d315f502e4bc0716d386a0252097 397 PANTHER PTHR10909:SF307 4 396 2.5E-274 T 22-04-2016 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 SMART SM00388 309 377 5.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 27 201 6.4E-22 T 22-04-2016 IPR024478 4HB MCP domain RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 SUPERFAMILY SSF158472 232 280 4.71E-9 T 22-04-2016 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 532 4.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 SMART SM00304 231 284 6.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 SMART SM00387 424 534 4.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 Gene3D G3DSA:3.30.565.10 383 532 7.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 Gene3D G3DSA:1.10.287.130 301 372 1.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 372 3.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 SUPERFAMILY SSF47384 294 373 3.92E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 SUPERFAMILY SSF55874 381 532 6.81E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 Pfam PF00672 HAMP domain 213 278 5.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PANTHER PTHR24423 1 7 1.4E-62 T 22-04-2016 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PANTHER PTHR24423 225 279 1.4E-62 T 22-04-2016 RPIC_RS14485 b72362749e876b4c9965f9288900111e 535 PANTHER PTHR24423 304 532 1.4E-62 T 22-04-2016 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 SMART SM00388 309 377 5.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 Pfam PF12729 Four helix bundle sensory module for signal transduction 27 201 6.4E-22 T 22-04-2016 IPR024478 4HB MCP domain RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 SUPERFAMILY SSF158472 232 280 4.71E-9 T 22-04-2016 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 532 4.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 SMART SM00304 231 284 6.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 SMART SM00387 424 534 4.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 Gene3D G3DSA:3.30.565.10 383 532 7.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 Gene3D G3DSA:1.10.287.130 301 372 1.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 372 3.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 SUPERFAMILY SSF47384 294 373 3.92E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 4.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 SUPERFAMILY SSF55874 381 532 6.81E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 Pfam PF00672 HAMP domain 213 278 5.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PANTHER PTHR24423 1 7 1.4E-62 T 22-04-2016 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PANTHER PTHR24423 225 279 1.4E-62 T 22-04-2016 RPIC_RS08230 b72362749e876b4c9965f9288900111e 535 PANTHER PTHR24423 304 532 1.4E-62 T 22-04-2016 RPIC_RS12360 acc5fa2b5ba1bb8bdb601c18b7cb1a7c 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 73 121 1.7E-14 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12360 acc5fa2b5ba1bb8bdb601c18b7cb1a7c 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 18 67 1.0E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12360 acc5fa2b5ba1bb8bdb601c18b7cb1a7c 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 238 1.4E-9 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12360 acc5fa2b5ba1bb8bdb601c18b7cb1a7c 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 138 188 1.4E-15 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.528 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 Gene3D G3DSA:3.90.1150.10 284 415 2.3E-59 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 SUPERFAMILY SSF53383 8 415 5.56E-181 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 PIRSF PIRSF000412 1 415 1.6E-167 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 Gene3D G3DSA:3.40.640.10 38 283 1.6E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 PANTHER PTHR11680 9 415 8.4E-256 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC_RS03310 3881f1faabbf56c46446726794b7a929 415 Pfam PF00464 Serine hydroxymethyltransferase 10 384 1.6E-174 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Gene3D G3DSA:3.40.50.300 239 268 1.0E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Pfam PF12631 MnmE helical domain 145 478 9.9E-56 T 22-04-2016 IPR025867 MnmE, helical domain RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 30 481 2.1E-98 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Gene3D G3DSA:3.30.1360.120 25 143 3.7E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 SUPERFAMILY SSF116878 405 481 1.57E-48 T 22-04-2016 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 SUPERFAMILY SSF116878 143 242 1.57E-48 T 22-04-2016 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 PANTHER PTHR11649 27 481 3.2E-152 T 22-04-2016 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 241 261 1.6E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 308 326 1.6E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Gene3D G3DSA:3.40.50.300 308 401 4.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Gene3D G3DSA:1.20.120.430 269 293 1.6E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Gene3D G3DSA:1.20.120.430 410 481 1.6E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Gene3D G3DSA:1.20.120.430 144 204 1.6E-56 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 240 367 6.4E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 24 481 32.28 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Pfam PF10396 GTP-binding protein TrmE N-terminus 25 142 3.2E-38 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 Pfam PF01926 50S ribosome-binding GTPase 241 362 1.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 PANTHER PTHR11649:SF56 27 481 3.2E-152 T 22-04-2016 RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 SUPERFAMILY SSF52540 226 399 6.37E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS18620 9d4001e1f91697abcadabdf382387f3f 481 SUPERFAMILY SSF52540 90 192 6.37E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 PANTHER PTHR33603 1 155 4.3E-55 T 22-04-2016 RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 PANTHER PTHR33603:SF1 1 155 4.3E-55 T 22-04-2016 RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.858 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.6E-50 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 Gene3D G3DSA:3.40.1280.10 1 155 2.5E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.1E-44 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 PIRSF PIRSF004505 1 155 6.2E-47 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS11790 84aaa34579864249c8ddd7ce73da402f 156 SUPERFAMILY SSF75217 1 154 6.54E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS00845 c0f7fcec31156a09446a2d40eb0f82ed 655 Pfam PF04183 IucA / IucC family 203 442 1.0E-65 T 22-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RPIC_RS00845 c0f7fcec31156a09446a2d40eb0f82ed 655 PANTHER PTHR34384 13 655 8.5E-89 T 22-04-2016 RPIC_RS00845 c0f7fcec31156a09446a2d40eb0f82ed 655 Pfam PF06276 Ferric iron reductase FhuF-like transporter 477 638 1.4E-22 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 Gene3D G3DSA:3.30.565.10 327 478 1.6E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 SUPERFAMILY SSF47384 243 323 1.61E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 SMART SM00387 368 478 7.7E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PANTHER PTHR24423 3 8 3.7E-64 T 22-04-2016 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PANTHER PTHR24423 200 474 3.7E-64 T 22-04-2016 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 476 4.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PANTHER PTHR24423:SF474 3 8 3.7E-64 T 22-04-2016 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PANTHER PTHR24423:SF474 200 474 3.7E-64 T 22-04-2016 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 323 1.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 SUPERFAMILY SSF55874 313 475 1.83E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 SMART SM00388 259 324 2.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 2.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 2.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 2.8E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 Pfam PF08521 Two-component sensor kinase N-terminal 34 182 2.5E-32 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC_RS17875 c64d85cbcb4d5656ca429a7b92e3b9b2 483 Gene3D G3DSA:1.10.287.130 251 319 6.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 1.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 Pfam PF13633 Prokaryotic N-terminal methylation site 12 38 5.4E-13 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 SUPERFAMILY SSF54523 15 112 5.23E-21 T 22-04-2016 RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 Pfam PF00114 Pilin (bacterial filament) 43 174 2.2E-10 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 Gene3D G3DSA:3.30.700.10 15 174 6.5E-34 T 22-04-2016 RPIC_RS02355 06414569fb9e98580e017140084a8fab 174 PANTHER PTHR30093 12 59 1.7E-16 T 22-04-2016 RPIC_RS00835 a8174f5dcfc0c5e298c5f870a2251a9a 421 Pfam PF04892 VanZ like family 59 164 1.5E-10 T 22-04-2016 IPR006976 VanZ-like RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 Gene3D G3DSA:3.40.50.300 1 248 2.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 1.3E-105 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 SUPERFAMILY SSF52540 1 269 5.41E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 PIRSF PIRSF003092 1 272 4.3E-92 T 22-04-2016 IPR025501 ATP binding protein MinD RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 PANTHER PTHR13696 1 258 3.4E-84 T 22-04-2016 RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.3E-28 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS17660 4e0ac5cda6cf15dbb09acbfb5b4fbe68 273 PANTHER PTHR13696:SF1 1 258 3.4E-84 T 22-04-2016 RPIC_RS05470 a0ea1129e423b1442a4d681ee11aa4ab 365 PANTHER PTHR12169:SF11 1 359 6.9E-149 T 22-04-2016 RPIC_RS05470 a0ea1129e423b1442a4d681ee11aa4ab 365 Gene3D G3DSA:3.40.50.300 14 167 5.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05470 a0ea1129e423b1442a4d681ee11aa4ab 365 SUPERFAMILY SSF52540 46 211 1.18E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05470 a0ea1129e423b1442a4d681ee11aa4ab 365 PANTHER PTHR12169 1 359 6.9E-149 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RPIC_RS05470 a0ea1129e423b1442a4d681ee11aa4ab 365 Pfam PF03969 AFG1-like ATPase 3 354 1.2E-127 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 RPIC_RS10525 a9c3e7b061c70dbc3f20cfe17ed0f428 968 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 924 967 9.4E-20 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal RPIC_RS10525 a9c3e7b061c70dbc3f20cfe17ed0f428 968 Gene3D G3DSA:1.25.40.10 714 715 2.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS10525 a9c3e7b061c70dbc3f20cfe17ed0f428 968 Gene3D G3DSA:1.25.40.10 614 670 2.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS10525 a9c3e7b061c70dbc3f20cfe17ed0f428 968 Gene3D G3DSA:1.25.40.10 922 951 2.1E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS10525 a9c3e7b061c70dbc3f20cfe17ed0f428 968 Gene3D G3DSA:3.10.350.10 222 279 8.5E-4 T 22-04-2016 IPR018392 LysM domain RPIC_RS10525 a9c3e7b061c70dbc3f20cfe17ed0f428 968 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 228 300 2.1E-24 T 22-04-2016 IPR020012 Motility protein FimV, N-terminal RPIC_RS17385 66b0979e560cf33b812d82e97550db88 153 SMART SM00881 17 118 1.0E-22 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC_RS17385 66b0979e560cf33b812d82e97550db88 153 SUPERFAMILY SSF51735 13 148 1.77E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17385 66b0979e560cf33b812d82e97550db88 153 Gene3D G3DSA:3.40.50.720 10 148 5.2E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17385 66b0979e560cf33b812d82e97550db88 153 PANTHER PTHR33303 7 149 1.9E-42 T 22-04-2016 RPIC_RS17385 66b0979e560cf33b812d82e97550db88 153 Pfam PF13380 CoA binding domain 21 144 4.0E-39 T 22-04-2016 IPR003781 CoA-binding GO:0048037 RPIC_RS17145 184739b7eab2f1c3ba32342969a22efc 118 SUPERFAMILY SSF46626 21 113 2.25E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17145 184739b7eab2f1c3ba32342969a22efc 118 Gene3D G3DSA:1.10.760.10 37 114 3.6E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17145 184739b7eab2f1c3ba32342969a22efc 118 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 110 2.8E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 SUPERFAMILY SSF52021 7 152 4.71E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 8.1E-10 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 8.1E-10 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 8.1E-10 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 SUPERFAMILY SSF52317 156 374 4.74E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PANTHER PTHR11405 6 378 1.5E-229 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 Gene3D G3DSA:3.40.50.880 156 375 7.0E-81 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 3.1E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 Gene3D G3DSA:3.50.30.20 8 145 2.9E-60 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 3.8E-145 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 Pfam PF00117 Glutamine amidotransferase class-I 196 371 4.2E-46 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 9.7E-39 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 9.7E-39 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 9.7E-39 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 9.7E-39 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 9.7E-39 T 22-04-2016 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 377 47.997 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS10025 317251a8d6357a0aea4412cc89229bfe 378 SMART SM01097 6 136 4.4E-87 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 Pfam PF01196 Ribosomal protein L17 20 115 2.5E-36 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 Gene3D G3DSA:3.90.1030.10 1 117 4.6E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.437 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 SUPERFAMILY SSF64263 1 119 1.31E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 7.5E-47 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 PANTHER PTHR14413 1 119 5.4E-64 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16145 aad67805511dc406d37d5aac2ce78bfe 132 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 102 126 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 SUPERFAMILY SSF109635 5 98 1.19E-29 T 22-04-2016 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 97 132 1.1E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 PANTHER PTHR33823 17 135 3.4E-36 T 22-04-2016 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 SUPERFAMILY SSF57716 99 137 1.03E-7 T 22-04-2016 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 PANTHER PTHR33823:SF2 17 135 3.4E-36 T 22-04-2016 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 138 27.851 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RPIC_RS18375 38ae798bf1ff4688c94ac5d7a34b3a85 139 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 6.4E-43 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 1.9E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 1.9E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 1.9E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 SMART SM00422 9 78 5.4E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 SUPERFAMILY SSF46955 11 124 7.69E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 Gene3D G3DSA:1.10.1660.10 11 121 3.9E-27 T 22-04-2016 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 PANTHER PTHR30204:SF2 1 135 4.9E-32 T 22-04-2016 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 Pfam PF13411 MerR HTH family regulatory protein 11 74 2.1E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09670 a14d1374d151e88a0557ee22a5ccc7cc 151 PANTHER PTHR30204 1 135 4.9E-32 T 22-04-2016 RPIC_RS17105 432ee367865378b698b33ac8ab0a8005 220 SUPERFAMILY SSF46626 1 21 5.61E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17105 432ee367865378b698b33ac8ab0a8005 220 SUPERFAMILY SSF46626 105 209 5.61E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17105 432ee367865378b698b33ac8ab0a8005 220 PIRSF PIRSF024608 4 220 2.5E-85 T 22-04-2016 IPR016823 Sulfur oxidation c-type cytochrome SoxX, type II RPIC_RS17105 432ee367865378b698b33ac8ab0a8005 220 Gene3D G3DSA:1.10.760.10 108 211 8.5E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17105 432ee367865378b698b33ac8ab0a8005 220 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 134 213 1.0E-26 T 22-04-2016 IPR030999 Sulfur oxidation c-type cytochrome SoxX RPIC_RS08400 72268575323e5778b28cb94d093df557 301 SUPERFAMILY SSF53271 5 158 3.32E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS08400 72268575323e5778b28cb94d093df557 301 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 5 294 2.7E-60 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC_RS08400 72268575323e5778b28cb94d093df557 301 SUPERFAMILY SSF53271 161 294 3.15E-27 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS08400 72268575323e5778b28cb94d093df557 301 Gene3D G3DSA:3.40.50.2020 159 278 1.4E-20 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS08400 72268575323e5778b28cb94d093df557 301 PANTHER PTHR10210:SF32 4 296 5.1E-54 T 22-04-2016 RPIC_RS08400 72268575323e5778b28cb94d093df557 301 PANTHER PTHR10210 4 296 5.1E-54 T 22-04-2016 RPIC_RS08400 72268575323e5778b28cb94d093df557 301 Pfam PF00156 Phosphoribosyl transferase domain 153 257 5.5E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS08400 72268575323e5778b28cb94d093df557 301 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 115 2.7E-22 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 RPIC_RS08400 72268575323e5778b28cb94d093df557 301 SMART SM01400 3 117 1.7E-37 T 22-04-2016 RPIC_RS08400 72268575323e5778b28cb94d093df557 301 Gene3D G3DSA:3.40.50.2020 4 158 4.2E-34 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 499 7.4E-213 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 SUPERFAMILY SSF110921 392 501 6.02E-27 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 501 2.7E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 PANTHER PTHR10277:SF9 1 510 5.7E-238 T 22-04-2016 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 511 42.231 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 SMART SM00917 371 502 1.2E-39 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 SUPERFAMILY SSF51569 1 292 3.85E-96 T 22-04-2016 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 Gene3D G3DSA:3.20.20.70 1 348 2.5E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 Pfam PF00682 HMGL-like 5 274 9.2E-99 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10935 615d332fdc8ec41dced39b9cb34d8661 513 PANTHER PTHR10277 1 510 5.7E-238 T 22-04-2016 RPIC_RS00570 5769bc6e858d8592f33146d6346b10e9 312 SUPERFAMILY SSF53474 52 278 1.32E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00570 5769bc6e858d8592f33146d6346b10e9 312 Pfam PF00326 Prolyl oligopeptidase family 88 170 3.1E-11 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RPIC_RS00570 5769bc6e858d8592f33146d6346b10e9 312 Gene3D G3DSA:3.40.50.1820 39 249 7.4E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 467 3.9E-26 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 SUPERFAMILY SSF51621 2 78 1.01E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 SUPERFAMILY SSF51621 168 341 1.01E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 Pfam PF00224 Pyruvate kinase, barrel domain 5 334 3.2E-112 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 Gene3D G3DSA:3.20.20.60 5 75 1.4E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 Gene3D G3DSA:3.20.20.60 170 323 1.4E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 469 3.3E-149 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 SUPERFAMILY SSF50800 73 167 4.88E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 291 309 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 187 201 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 62 78 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 310 326 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 241 265 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 266 290 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PRINTS PR01050 Pyruvate kinase family signature 214 240 2.0E-61 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 Gene3D G3DSA:3.40.1380.20 324 467 2.8E-39 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 Gene3D G3DSA:2.40.33.10 76 169 3.9E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 SUPERFAMILY SSF52935 321 469 2.49E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS17255 c952681fcd9a0e93e7c749b3c923f038 492 PANTHER PTHR11817 2 470 1.8E-197 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 280 440 2.6E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 314 328 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 Pfam PF01479 S4 domain 215 256 5.6E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 Gene3D G3DSA:3.10.290.10 215 268 3.1E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 SUPERFAMILY SSF55120 274 444 7.04E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 PANTHER PTHR21600 214 448 1.2E-73 T 22-04-2016 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 PANTHER PTHR21600:SF2 214 448 1.2E-73 T 22-04-2016 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 Pfam PF00849 RNA pseudouridylate synthase 276 409 6.9E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 SMART SM00363 213 270 1.4E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS05540 57ed8246f994571536b4413b008eb2cd 594 SUPERFAMILY SSF55174 215 305 5.0E-13 T 22-04-2016 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 PANTHER PTHR26402 1 220 7.4E-109 T 22-04-2016 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 Gene3D G3DSA:1.10.10.10 123 222 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 SMART SM00862 144 219 3.3E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 SUPERFAMILY SSF52172 2 175 2.7E-44 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 Pfam PF00072 Response regulator receiver domain 3 112 2.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 SMART SM00448 1 111 2.6E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 2.1E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 PANTHER PTHR26402:SF575 1 220 7.4E-109 T 22-04-2016 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 1.3E-119 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RPIC_RS08635 c4732299ae96c55de4dd51f4d7bc0484 225 Gene3D G3DSA:3.40.50.2300 2 122 8.9E-42 T 22-04-2016 RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 PANTHER PTHR23518 1 379 3.0E-109 T 22-04-2016 RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 Pfam PF07690 Major Facilitator Superfamily 9 215 4.9E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 Pfam PF07690 Major Facilitator Superfamily 236 378 2.0E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 SUPERFAMILY SSF103473 5 380 9.02E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 PANTHER PTHR23518:SF2 1 379 3.0E-109 T 22-04-2016 RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 Gene3D G3DSA:1.20.1250.20 5 187 2.1E-24 T 22-04-2016 RPIC_RS06575 62c8042cb2f928991cca209423e3d43a 387 Gene3D G3DSA:1.20.1250.20 210 378 6.6E-22 T 22-04-2016 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 PANTHER PTHR11731:SF123 1 126 5.4E-75 T 22-04-2016 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 PANTHER PTHR11731:SF123 163 431 5.4E-75 T 22-04-2016 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 SUPERFAMILY SSF69304 163 431 8.63E-58 T 22-04-2016 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 24 430 1.6E-154 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Pfam PF04052 TolB amino-terminal domain 33 131 2.6E-25 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 SUPERFAMILY SSF52964 41 164 1.57E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Pfam PF07676 WD40-like Beta Propeller Repeat 377 402 0.027 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Pfam PF07676 WD40-like Beta Propeller Repeat 328 363 9.2E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Pfam PF07676 WD40-like Beta Propeller Repeat 280 316 1.5E-14 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Pfam PF07676 WD40-like Beta Propeller Repeat 197 228 2.4E-6 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Pfam PF07676 WD40-like Beta Propeller Repeat 239 271 9.6E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 PANTHER PTHR11731 1 126 5.4E-75 T 22-04-2016 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 PANTHER PTHR11731 163 431 5.4E-75 T 22-04-2016 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Gene3D G3DSA:2.130.10.10 155 431 4.0E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Gene3D G3DSA:3.40.50.10070 32 154 2.9E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 RPIC_RS03340 30f7b5257bd331eb93196fe716381eaf 434 Hamap MF_00671 Protein TolB [tolB]. 14 429 34.549 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 RPIC_RS14270 dc4f3a883de3011565374bbcdfc22ce4 487 SUPERFAMILY SSF111283 27 486 1.96E-131 T 22-04-2016 RPIC_RS14270 dc4f3a883de3011565374bbcdfc22ce4 487 PANTHER PTHR30624:SF4 22 487 8.0E-218 T 22-04-2016 RPIC_RS14270 dc4f3a883de3011565374bbcdfc22ce4 487 Pfam PF01523 Putative modulator of DNA gyrase 43 338 1.7E-65 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS14270 dc4f3a883de3011565374bbcdfc22ce4 487 PANTHER PTHR30624 22 487 8.0E-218 T 22-04-2016 RPIC_RS14270 dc4f3a883de3011565374bbcdfc22ce4 487 PIRSF PIRSF004919 23 487 4.9E-138 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 Gene3D G3DSA:1.10.10.10 4 88 8.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 PANTHER PTHR30419 1 309 1.5E-76 T 22-04-2016 RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 Gene3D G3DSA:3.40.190.10 90 176 1.0E-21 T 22-04-2016 RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 Gene3D G3DSA:3.40.190.10 177 264 4.8E-20 T 22-04-2016 RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 SUPERFAMILY SSF53850 90 295 8.54E-41 T 22-04-2016 RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 PANTHER PTHR30419:SF2 1 309 1.5E-76 T 22-04-2016 RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 Pfam PF03466 LysR substrate binding domain 89 293 6.9E-41 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 SUPERFAMILY SSF46785 2 113 1.31E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09240 08fa132b68fcba7ce418e106d91e93af 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 8.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 Gene3D G3DSA:3.30.43.10 1 51 5.4E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 167 5.5E-45 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 Gene3D G3DSA:3.30.390.50 171 264 2.2E-16 T 22-04-2016 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 SMART SM01092 171 263 2.8E-20 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 SUPERFAMILY SSF56176 1 167 1.78E-46 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 PANTHER PTHR11908 3 264 4.2E-65 T 22-04-2016 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 193 262 6.9E-6 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 PANTHER PTHR11908:SF68 3 264 4.2E-65 T 22-04-2016 RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 SUPERFAMILY SSF55447 169 264 8.11E-20 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal RPIC_RS06715 7db2985c0556bfd9e96dfd3616fe8f83 268 Gene3D G3DSA:3.30.465.10 55 167 3.7E-30 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Gene3D G3DSA:3.30.1600.10 130 173 1.2E-22 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Gene3D G3DSA:3.30.1600.10 41 81 1.2E-22 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 SUPERFAMILY SSF52467 8 248 8.28E-81 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 25 249 59.832 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Pfam PF02146 Sir2 family 32 203 9.6E-46 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 PANTHER PTHR11085 3 248 2.8E-83 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Gene3D G3DSA:3.40.50.1220 89 129 2.2E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Gene3D G3DSA:3.40.50.1220 13 40 2.2E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS05340 e48f04840eedbbf50db7d6f3bc1941e2 249 Gene3D G3DSA:3.40.50.1220 182 247 2.2E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS01400 9c5cc0eeeb7f4d968bbc41b2a3b4372f 409 Pfam PF07995 Glucose / Sorbosone dehydrogenase 170 401 8.3E-13 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 RPIC_RS01400 9c5cc0eeeb7f4d968bbc41b2a3b4372f 409 SUPERFAMILY SSF50952 69 407 1.44E-28 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 RPIC_RS01400 9c5cc0eeeb7f4d968bbc41b2a3b4372f 409 Gene3D G3DSA:2.120.10.30 2 9 4.9E-55 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC_RS01400 9c5cc0eeeb7f4d968bbc41b2a3b4372f 409 Gene3D G3DSA:2.120.10.30 53 408 4.9E-55 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC_RS01400 9c5cc0eeeb7f4d968bbc41b2a3b4372f 409 PANTHER PTHR19328:SF33 33 407 1.0E-68 T 22-04-2016 RPIC_RS01400 9c5cc0eeeb7f4d968bbc41b2a3b4372f 409 PANTHER PTHR19328 33 407 1.0E-68 T 22-04-2016 RPIC_RS12580 dfdf6d7fbc3322e149f9338bc47c8113 215 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 205 1.2E-39 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RPIC_RS12580 dfdf6d7fbc3322e149f9338bc47c8113 215 Gene3D G3DSA:2.50.20.10 28 215 3.2E-63 T 22-04-2016 RPIC_RS12580 dfdf6d7fbc3322e149f9338bc47c8113 215 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 14 213 3.8E-16 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RPIC_RS12580 dfdf6d7fbc3322e149f9338bc47c8113 215 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 13 215 29.943 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 RPIC_RS12580 dfdf6d7fbc3322e149f9338bc47c8113 215 PANTHER PTHR35869 1 215 1.6E-36 T 22-04-2016 RPIC_RS12580 dfdf6d7fbc3322e149f9338bc47c8113 215 SUPERFAMILY SSF89392 28 215 1.33E-46 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC_RS06055 af7b4b800200cf1ae9c305775b86d4e5 294 Pfam PF00563 EAL domain 43 257 1.7E-16 T 22-04-2016 IPR001633 EAL domain RPIC_RS06055 af7b4b800200cf1ae9c305775b86d4e5 294 SMART SM00052 31 265 0.0066 T 22-04-2016 IPR001633 EAL domain RPIC_RS06055 af7b4b800200cf1ae9c305775b86d4e5 294 Gene3D G3DSA:3.20.20.450 44 253 1.1E-11 T 22-04-2016 IPR001633 EAL domain RPIC_RS06055 af7b4b800200cf1ae9c305775b86d4e5 294 SUPERFAMILY SSF141868 45 264 1.57E-19 T 22-04-2016 IPR001633 EAL domain RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 ProSitePatterns PS00571 Amidases signature. 148 179 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 491 94.745 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 Gene3D G3DSA:3.90.1300.10 2 497 3.2E-181 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 PANTHER PTHR11895:SF7 5 497 2.3E-219 T 22-04-2016 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 Pfam PF01425 Amidase 22 480 6.2E-150 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 PANTHER PTHR11895 5 497 2.3E-219 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 491 2.1E-175 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS18315 695b14fb89b98cfe137cac6b43ffed80 499 SUPERFAMILY SSF75304 3 497 9.94E-161 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 6.4E-297 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 SUPERFAMILY SSF52540 301 523 2.75E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 SMART SM00382 348 526 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 SMART SM00382 31 236 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 SUPERFAMILY SSF52540 12 236 9.61E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 Gene3D G3DSA:3.40.50.300 321 536 3.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 Pfam PF12848 ABC transporter 230 306 5.0E-12 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 Gene3D G3DSA:3.40.50.300 12 105 2.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 Gene3D G3DSA:3.40.50.300 141 288 2.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 Pfam PF00005 ABC transporter 22 191 6.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS15590 4569bdd8e946cada204bc9994c247cc0 555 Pfam PF00005 ABC transporter 340 473 2.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS13400 1565ef82ef385552fed8a88c72f55905 194 Gene3D G3DSA:3.30.870.10 36 179 8.7E-30 T 22-04-2016 RPIC_RS13400 1565ef82ef385552fed8a88c72f55905 194 PANTHER PTHR21248 41 178 6.0E-31 T 22-04-2016 RPIC_RS13400 1565ef82ef385552fed8a88c72f55905 194 Pfam PF13091 PLD-like domain 52 177 2.6E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain RPIC_RS13400 1565ef82ef385552fed8a88c72f55905 194 SUPERFAMILY SSF56024 40 183 4.26E-29 T 22-04-2016 RPIC_RS13445 313c9a4516e552f01e6aa1b0f92c02d9 192 PANTHER PTHR30336 5 151 7.9E-21 T 22-04-2016 RPIC_RS13445 313c9a4516e552f01e6aa1b0f92c02d9 192 Pfam PF02698 DUF218 domain 47 181 1.1E-20 T 22-04-2016 IPR003848 Domain of unknown function DUF218 RPIC_RS13445 313c9a4516e552f01e6aa1b0f92c02d9 192 Gene3D G3DSA:3.40.50.620 38 153 2.1E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 Pfam PF02021 Uncharacterised protein family UPF0102 15 109 2.4E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 PANTHER PTHR34039:SF1 4 125 5.8E-39 T 22-04-2016 RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 Gene3D G3DSA:3.40.1350.10 15 123 7.4E-37 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 PANTHER PTHR34039 4 125 5.8E-39 T 22-04-2016 RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 Hamap MF_00048 UPF0102 protein YraN [yraN]. 8 122 23.57 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 8 121 1.9E-28 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 RPIC_RS17155 07809d99bd5bc0d9d1ae252b6795ccbf 125 SUPERFAMILY SSF52980 11 119 1.74E-16 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 Gene3D G3DSA:3.30.70.360 295 380 3.2E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 Pfam PF01546 Peptidase family M20/M25/M40 168 566 8.8E-24 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 Gene3D G3DSA:3.30.70.360 381 471 2.1E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 SUPERFAMILY SSF55031 275 475 4.34E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 PANTHER PTHR11014 96 279 1.0E-40 T 22-04-2016 RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 PANTHER PTHR11014 356 574 1.0E-40 T 22-04-2016 RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 99 564 1.6E-80 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 Pfam PF07687 Peptidase dimerisation domain 357 470 1.1E-4 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 Gene3D G3DSA:3.40.630.10 512 571 1.0E-53 T 22-04-2016 RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 Gene3D G3DSA:3.40.630.10 96 281 1.0E-53 T 22-04-2016 RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 SUPERFAMILY SSF53187 488 571 2.86E-48 T 22-04-2016 RPIC_RS05840 0ceeb40eebb6be93b3577e234f2dca15 576 SUPERFAMILY SSF53187 96 275 2.86E-48 T 22-04-2016 RPIC_RS09735 4e88fef2ae67a9937a6fff4f8a05718c 122 PANTHER PTHR11803:SF17 1 119 2.4E-30 T 22-04-2016 RPIC_RS09735 4e88fef2ae67a9937a6fff4f8a05718c 122 Gene3D G3DSA:3.30.1330.40 13 119 7.6E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC_RS09735 4e88fef2ae67a9937a6fff4f8a05718c 122 SUPERFAMILY SSF55298 6 120 2.51E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC_RS09735 4e88fef2ae67a9937a6fff4f8a05718c 122 Pfam PF01042 Endoribonuclease L-PSP 9 119 2.9E-26 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RPIC_RS09735 4e88fef2ae67a9937a6fff4f8a05718c 122 PANTHER PTHR11803 1 119 2.4E-30 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RPIC_RS09735 4e88fef2ae67a9937a6fff4f8a05718c 122 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 96 114 - T 22-04-2016 IPR019897 RidA, conserved site RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 SUPERFAMILY SSF53328 2 193 4.19E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 2.9E-72 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 Gene3D G3DSA:3.40.50.170 1 193 5.0E-69 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.525 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 PANTHER PTHR10520 1 194 1.2E-97 T 22-04-2016 RPIC_RS13410 168fdbd104aefc1621fde8899e076b2f 216 Pfam PF00551 Formyl transferase 2 182 1.1E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Gene3D G3DSA:3.30.565.10 17 220 4.2E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 177 2.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Gene3D G3DSA:3.30.230.10 224 405 3.3E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 432 446 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 284 297 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 591 607 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 33 48 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 501 517 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 114 128 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 539 551 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 68 81 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR00418 DNA topoisomerase II family signature 519 536 1.3E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PANTHER PTHR10169 4 661 0.0 T 22-04-2016 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Gene3D G3DSA:3.40.50.670 416 640 4.2E-75 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 SMART SM00433 35 655 1.4E-186 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 SUPERFAMILY SSF56719 406 652 3.4E-74 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Pfam PF00204 DNA gyrase B 267 403 1.1E-33 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PANTHER PTHR10169:SF45 4 661 0.0 T 22-04-2016 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Pfam PF01751 Toprim domain 431 535 3.2E-12 T 22-04-2016 IPR006171 Toprim domain RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 4 659 44.118 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 SUPERFAMILY SSF54211 260 405 5.69E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 380 405 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 140 154 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 28 41 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 356 379 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 312 328 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 466 487 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 PRINTS PR01098 Topoisomerase IV subunit B signature 329 344 6.3E-30 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 SUPERFAMILY SSF55874 6 221 4.89E-56 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 587 651 7.4E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 RPIC_RS04070 5c41edbd8ddb1b81def2983b319c10f3 661 SMART SM00387 29 179 1.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS09255 3c8a83a23578fb86073e44aabbc51248 259 PANTHER PTHR30040 6 242 2.0E-29 T 22-04-2016 RPIC_RS09255 3c8a83a23578fb86073e44aabbc51248 259 SUPERFAMILY SSF143631 6 256 3.4E-48 T 22-04-2016 IPR003374 ApbE-like domain RPIC_RS09255 3c8a83a23578fb86073e44aabbc51248 259 PANTHER PTHR30040:SF2 6 242 2.0E-29 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RPIC_RS09255 3c8a83a23578fb86073e44aabbc51248 259 Pfam PF02424 ApbE family 13 247 6.1E-32 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 SUPERFAMILY SSF52540 4 251 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 SMART SM00382 34 218 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 Pfam PF00005 ABC transporter 25 168 2.7E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 Gene3D G3DSA:3.40.50.300 4 240 2.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 Pfam PF08402 TOBE domain 284 353 1.1E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 PANTHER PTHR24220 5 292 3.4E-90 T 22-04-2016 RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 PANTHER PTHR24220:SF123 5 292 3.4E-90 T 22-04-2016 RPIC_RS16485 4d76e5e96a190dfce248c12b8f9a1e96 365 SUPERFAMILY SSF50331 243 361 1.56E-15 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS05435 c6d5fcf4b3183a34cbc92adf0067867b 293 Gene3D G3DSA:1.10.3720.10 61 290 6.4E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05435 c6d5fcf4b3183a34cbc92adf0067867b 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 292 4.5E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05435 c6d5fcf4b3183a34cbc92adf0067867b 293 PANTHER PTHR32243 4 292 2.9E-103 T 22-04-2016 RPIC_RS05435 c6d5fcf4b3183a34cbc92adf0067867b 293 PANTHER PTHR32243:SF13 4 292 2.9E-103 T 22-04-2016 RPIC_RS05435 c6d5fcf4b3183a34cbc92adf0067867b 293 SUPERFAMILY SSF161098 55 282 4.45E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 Gene3D G3DSA:1.10.540.10 4 126 7.1E-44 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 SUPERFAMILY SSF47203 233 389 8.7E-44 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 PANTHER PTHR10909 9 393 8.6E-262 T 22-04-2016 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 SUPERFAMILY SSF56645 6 248 2.88E-88 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 Gene3D G3DSA:1.20.140.10 224 390 1.7E-61 T 22-04-2016 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 388 2.6E-38 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 PANTHER PTHR10909:SF326 9 393 8.6E-262 T 22-04-2016 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 1.0E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 Gene3D G3DSA:2.40.110.10 127 223 5.8E-42 T 22-04-2016 RPIC_RS00620 e85ca1f74d98ea6544c08c4b2b5e30ee 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 3.8E-38 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS04140 9de46823e080a45a0d7549e91264815d 274 PANTHER PTHR11614:SF89 7 258 1.7E-20 T 22-04-2016 RPIC_RS04140 9de46823e080a45a0d7549e91264815d 274 SUPERFAMILY SSF53474 7 258 1.33E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04140 9de46823e080a45a0d7549e91264815d 274 PANTHER PTHR11614 7 258 1.7E-20 T 22-04-2016 RPIC_RS04140 9de46823e080a45a0d7549e91264815d 274 Gene3D G3DSA:3.40.50.1820 7 258 4.2E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04140 9de46823e080a45a0d7549e91264815d 274 Pfam PF12697 Alpha/beta hydrolase family 11 252 4.7E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 Gene3D G3DSA:3.40.190.10 174 260 3.1E-18 T 22-04-2016 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 SUPERFAMILY SSF46785 1 84 3.49E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 SUPERFAMILY SSF53850 88 295 3.67E-30 T 22-04-2016 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 Gene3D G3DSA:3.40.190.10 89 173 5.2E-10 T 22-04-2016 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 PANTHER PTHR30427 1 293 2.3E-80 T 22-04-2016 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 Gene3D G3DSA:1.10.10.10 1 86 3.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 Pfam PF03466 LysR substrate binding domain 87 289 5.8E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.3E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10235 3d2a6b185a7c6f07f719799e987a7e6d 324 PANTHER PTHR30427:SF1 1 293 2.3E-80 T 22-04-2016 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 Gene3D G3DSA:2.40.50.140 1 123 7.6E-67 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.666 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 SUPERFAMILY SSF50249 2 123 1.11E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PANTHER PTHR11652 1 116 3.2E-76 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 Pfam PF00164 Ribosomal protein S12/S23 5 123 5.4E-44 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PIRSF PIRSF002133 1 124 1.7E-55 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.4E-61 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS16305 ca4a6b7baa13e50eae118d79f91c74c1 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 4.1E-71 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 264 326 9.3E-22 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 SUPERFAMILY SSF81891 235 469 4.97E-56 T 22-04-2016 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 Gene3D G3DSA:3.30.460.10 70 236 4.3E-47 T 22-04-2016 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 505 36.589 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 Pfam PF01743 Poly A polymerase head domain 88 237 1.4E-32 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 PANTHER PTHR13734:SF47 7 324 3.2E-104 T 22-04-2016 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 59 503 1.6E-147 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 Gene3D G3DSA:1.10.3090.10 237 466 5.9E-50 T 22-04-2016 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 Pfam PF12626 Polymerase A arginine-rich C-terminus 378 502 9.5E-45 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 PANTHER PTHR13734 7 324 3.2E-104 T 22-04-2016 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 SUPERFAMILY SSF81301 182 234 1.31E-35 T 22-04-2016 RPIC_RS14100 13c4cc0caee2c328d436f264cde87225 521 SUPERFAMILY SSF81301 61 155 1.31E-35 T 22-04-2016 RPIC_RS10050 54bb5e35656a16f2d952016380846dde 148 Gene3D G3DSA:3.30.420.10 2 143 9.7E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS10050 54bb5e35656a16f2d952016380846dde 148 PANTHER PTHR10642 4 145 1.9E-59 T 22-04-2016 RPIC_RS10050 54bb5e35656a16f2d952016380846dde 148 Hamap MF_00042 Ribonuclease H [rnhA]. 1 148 33.799 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 RPIC_RS10050 54bb5e35656a16f2d952016380846dde 148 Pfam PF00075 RNase H 2 140 4.0E-50 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 RPIC_RS10050 54bb5e35656a16f2d952016380846dde 148 SUPERFAMILY SSF53098 2 141 9.74E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 Gene3D G3DSA:3.40.190.10 99 174 3.3E-10 T 22-04-2016 RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 Pfam PF03466 LysR substrate binding domain 95 290 1.1E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 PANTHER PTHR30579 4 291 6.9E-66 T 22-04-2016 RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 SUPERFAMILY SSF46785 5 118 1.36E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 Gene3D G3DSA:3.40.190.10 218 260 2.9E-5 T 22-04-2016 RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 62 2.8E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 PANTHER PTHR30579:SF3 4 291 6.9E-66 T 22-04-2016 RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 Gene3D G3DSA:1.10.10.10 12 92 1.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17360 ac338359359c5798d8f134c22b7d1c65 293 SUPERFAMILY SSF53850 95 291 2.35E-26 T 22-04-2016 RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 SUPERFAMILY SSF55874 245 381 2.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 288 381 2.1E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 Gene3D G3DSA:3.30.565.10 239 384 1.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 SMART SM00387 282 383 1.6E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 PANTHER PTHR34220 177 387 9.3E-54 T 22-04-2016 RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 Pfam PF06580 Histidine kinase 188 267 3.9E-22 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RPIC_RS06090 6fc400c742409cabdd266e682930c64c 422 PANTHER PTHR34220:SF3 177 387 9.3E-54 T 22-04-2016 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 Gene3D G3DSA:3.60.15.10 5 256 3.9E-89 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 PANTHER PTHR11935 1 257 1.7E-93 T 22-04-2016 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 SUPERFAMILY SSF56281 3 256 1.68E-68 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 256 1.3E-101 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 PANTHER PTHR11935:SF7 1 257 1.7E-93 T 22-04-2016 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 170 256 3.9E-26 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 256 44.047 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 SMART SM00849 12 169 1.2E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 PIRSF PIRSF005457 1 256 4.6E-101 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 50 70 - T 22-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 RPIC_RS12465 e788abee64cc68b55b2b7f7a0e0bd0cc 257 Pfam PF00753 Metallo-beta-lactamase superfamily 14 169 6.7E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 Gene3D G3DSA:3.40.50.150 295 341 7.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 Gene3D G3DSA:3.40.50.150 104 246 7.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 PANTHER PTHR30468 1 341 2.7E-66 T 22-04-2016 RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 46 343 6.6E-115 T 22-04-2016 IPR017804 Methyltransferase EgtD-like RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 219 341 1.9E-41 T 22-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 PIRSF PIRSF018005 10 347 5.2E-136 T 22-04-2016 IPR017804 Methyltransferase EgtD-like RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 SUPERFAMILY SSF53335 281 335 1.3E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 SUPERFAMILY SSF53335 93 233 1.3E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04025 9a9470d34da48e16da4ae5b11ce914eb 348 PANTHER PTHR30468:SF6 1 341 2.7E-66 T 22-04-2016 RPIC_RS00170 fa22913ecd7ac12d279d65dcfff2687b 282 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 271 1.3E-30 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC_RS00170 fa22913ecd7ac12d279d65dcfff2687b 282 PANTHER PTHR30606 3 271 4.1E-41 T 22-04-2016 RPIC_RS00170 fa22913ecd7ac12d279d65dcfff2687b 282 PIRSF PIRSF026649 1 281 2.4E-71 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC_RS10330 b6d30053bf154e601bd271c3177592ef 312 Pfam PF00892 EamA-like transporter family 4 124 1.3E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS10330 b6d30053bf154e601bd271c3177592ef 312 Pfam PF00892 EamA-like transporter family 144 280 6.5E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS10330 b6d30053bf154e601bd271c3177592ef 312 PANTHER PTHR12715:SF11 1 287 2.2E-54 T 22-04-2016 RPIC_RS10330 b6d30053bf154e601bd271c3177592ef 312 PANTHER PTHR12715 1 287 2.2E-54 T 22-04-2016 RPIC_RS10330 b6d30053bf154e601bd271c3177592ef 312 SUPERFAMILY SSF103481 26 126 3.92E-17 T 22-04-2016 RPIC_RS10330 b6d30053bf154e601bd271c3177592ef 312 SUPERFAMILY SSF103481 180 284 1.27E-14 T 22-04-2016 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 SUPERFAMILY SSF51730 266 621 1.22E-120 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Gene3D G3DSA:3.20.20.220 265 619 1.3E-118 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 152 263 1.1E-45 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 PIRSF PIRSF000197 78 1323 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Pfam PF00171 Aldehyde dehydrogenase family 665 1110 4.6E-113 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Gene3D G3DSA:1.20.5.550 91 142 5.0E-24 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 SUPERFAMILY SSF47598 3 45 2.67E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 914 925 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 SUPERFAMILY SSF53720 634 1114 3.93E-129 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Pfam PF01619 Proline dehydrogenase 274 572 3.9E-98 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Gene3D G3DSA:3.40.309.10 902 1093 5.5E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 PANTHER PTHR11699 630 1111 1.1E-176 T 22-04-2016 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 SUPERFAMILY SSF81935 92 265 1.57E-64 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Gene3D G3DSA:1.10.2060.10 148 264 1.4E-53 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 PANTHER PTHR11699:SF18 630 1111 1.1E-176 T 22-04-2016 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 Gene3D G3DSA:3.40.605.10 658 901 2.4E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS17325 635ead4ebce1af935655afda23cebad8 1323 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 614 1114 1.5E-238 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852:SF15 4 140 3.9E-257 T 22-04-2016 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852:SF15 163 471 3.9E-257 T 22-04-2016 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852 4 140 3.9E-257 T 22-04-2016 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 PANTHER PTHR20852 163 471 3.9E-257 T 22-04-2016 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 SUPERFAMILY SSF54368 5 102 4.58E-37 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 Gene3D G3DSA:3.10.20.70 5 107 2.1E-41 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 Gene3D G3DSA:3.30.590.10 108 458 5.1E-139 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 Pfam PF00120 Glutamine synthetase, catalytic domain 105 468 7.9E-137 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 1.1E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 3.6E-202 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 SUPERFAMILY SSF55931 104 470 2.06E-137 T 22-04-2016 RPIC_RS05400 9ac430140ff5f973a3f89c9ca034baa2 471 SMART SM01230 104 381 1.0E-145 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RPIC_RS15455 0a99cb2313a2fd9f7710a7b09f26bf03 738 PANTHER PTHR30509 686 726 1.2E-23 T 22-04-2016 RPIC_RS15455 0a99cb2313a2fd9f7710a7b09f26bf03 738 PANTHER PTHR30509 2 621 1.2E-23 T 22-04-2016 RPIC_RS15455 0a99cb2313a2fd9f7710a7b09f26bf03 738 Pfam PF13515 Fusaric acid resistance protein-like 403 524 6.5E-17 T 22-04-2016 RPIC_RS15455 0a99cb2313a2fd9f7710a7b09f26bf03 738 PANTHER PTHR30509:SF8 686 726 1.2E-23 T 22-04-2016 RPIC_RS15455 0a99cb2313a2fd9f7710a7b09f26bf03 738 PANTHER PTHR30509:SF8 2 621 1.2E-23 T 22-04-2016 RPIC_RS15455 0a99cb2313a2fd9f7710a7b09f26bf03 738 Pfam PF12805 FUSC-like inner membrane protein yccS 69 336 1.9E-58 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal RPIC_RS02825 459faa9accfb5f71c555af8fb20e80ea 361 PANTHER PTHR22726 6 346 1.6E-48 T 22-04-2016 RPIC_RS02825 459faa9accfb5f71c555af8fb20e80ea 361 Pfam PF01435 Peptidase family M48 160 347 5.6E-24 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC_RS02825 459faa9accfb5f71c555af8fb20e80ea 361 PANTHER PTHR22726:SF7 6 346 1.6E-48 T 22-04-2016 RPIC_RS02825 459faa9accfb5f71c555af8fb20e80ea 361 Gene3D G3DSA:3.30.2010.10 172 240 1.6E-10 T 22-04-2016 RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 259 6.8E-110 T 22-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PANTHER PTHR24322 9 138 7.4E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PANTHER PTHR24322 154 186 7.4E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 6.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 Gene3D G3DSA:3.40.50.720 1 257 7.2E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 SUPERFAMILY SSF51735 3 258 4.26E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 Pfam PF00106 short chain dehydrogenase 5 197 4.0E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09745 534adb69cff098f46e9e8ac86c9bbe2a 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS05570 ac674f729f92ad74bff34db744a252b0 132 Gene3D G3DSA:1.10.10.60 15 99 2.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05570 ac674f729f92ad74bff34db744a252b0 132 SUPERFAMILY SSF48295 6 61 3.14E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS13165 ac674f729f92ad74bff34db744a252b0 132 Gene3D G3DSA:1.10.10.60 15 99 2.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13165 ac674f729f92ad74bff34db744a252b0 132 SUPERFAMILY SSF48295 6 61 3.14E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS17940 ac674f729f92ad74bff34db744a252b0 132 Gene3D G3DSA:1.10.10.60 15 99 2.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS17940 ac674f729f92ad74bff34db744a252b0 132 SUPERFAMILY SSF48295 6 61 3.14E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS13735 ac674f729f92ad74bff34db744a252b0 132 Gene3D G3DSA:1.10.10.60 15 99 2.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13735 ac674f729f92ad74bff34db744a252b0 132 SUPERFAMILY SSF48295 6 61 3.14E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS05045 ac674f729f92ad74bff34db744a252b0 132 Gene3D G3DSA:1.10.10.60 15 99 2.1E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05045 ac674f729f92ad74bff34db744a252b0 132 SUPERFAMILY SSF48295 6 61 3.14E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 14 621 51.662 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 SUPERFAMILY SSF68923 9 248 2.88E-102 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 Gene3D G3DSA:3.90.228.20 249 324 1.1E-28 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 Gene3D G3DSA:3.90.228.20 343 620 7.3E-100 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 PANTHER PTHR11561 21 620 0.0 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 Gene3D G3DSA:3.40.449.10 15 248 2.5E-101 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 273 281 - T 22-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 SUPERFAMILY SSF53795 249 620 5.49E-154 T 22-04-2016 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 Pfam PF00821 Phosphoenolpyruvate carboxykinase 26 620 4.2E-283 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS18545 bf4602c99a9df86af5bf538e1993ceb8 622 PIRSF PIRSF001348 1 622 7.8E-289 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS01730 152a77455c61123a6ecb214e94dd5621 145 Pfam PF03061 Thioesterase superfamily 39 110 9.1E-15 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS01730 152a77455c61123a6ecb214e94dd5621 145 Gene3D G3DSA:3.10.129.10 18 145 1.1E-37 T 22-04-2016 IPR029069 HotDog domain RPIC_RS01730 152a77455c61123a6ecb214e94dd5621 145 PANTHER PTHR11049:SF5 26 145 4.2E-43 T 22-04-2016 RPIC_RS01730 152a77455c61123a6ecb214e94dd5621 145 PANTHER PTHR11049 26 145 4.2E-43 T 22-04-2016 RPIC_RS01730 152a77455c61123a6ecb214e94dd5621 145 SUPERFAMILY SSF54637 24 144 7.03E-36 T 22-04-2016 IPR029069 HotDog domain RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 SUPERFAMILY SSF51735 8 168 8.52E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 291 2.0E-36 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 166 4.0E-37 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 Gene3D G3DSA:3.40.50.720 7 169 2.9E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 PIRSF PIRSF000103 2 295 2.8E-64 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 PANTHER PTHR22981:SF27 1 296 9.5E-126 T 22-04-2016 RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 Gene3D G3DSA:1.10.1040.10 171 292 7.0E-46 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 SUPERFAMILY SSF48179 171 293 2.61E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS18515 bc2fe81384fd01df2d910cd3104057a4 303 PANTHER PTHR22981 1 296 9.5E-126 T 22-04-2016 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 Pfam PF06508 Queuosine biosynthesis protein QueC 4 215 1.4E-77 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 PANTHER PTHR11587 2 224 9.1E-105 T 22-04-2016 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 208 1.8E-60 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 SUPERFAMILY SSF52402 2 223 2.65E-65 T 22-04-2016 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 PIRSF PIRSF006293 1 224 7.6E-78 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 PANTHER PTHR11587:SF3 2 224 9.1E-105 T 22-04-2016 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 221 54.989 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 RPIC_RS03355 6a5398412ec745e3985006a610f693d6 224 Gene3D G3DSA:3.40.50.620 2 223 2.5E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 Gene3D G3DSA:3.40.50.300 16 268 7.8E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 Gene3D G3DSA:3.40.50.300 285 540 3.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 SMART SM00382 47 244 3.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 SMART SM00382 323 516 8.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 518 542 7.6E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 273 3.9E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 PANTHER PTHR24220 19 424 2.2E-158 T 22-04-2016 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 SUPERFAMILY SSF52540 286 537 1.85E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 PANTHER PTHR24220:SF574 19 424 2.2E-158 T 22-04-2016 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 SUPERFAMILY SSF52540 17 265 1.65E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 Pfam PF00005 ABC transporter 315 467 1.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 Pfam PF00005 ABC transporter 39 194 5.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS05035 1bc4e75876816e195ac12f0b25c67d7a 551 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 Pfam PF07731 Multicopper oxidase 515 630 2.8E-22 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 Gene3D G3DSA:2.60.40.420 182 382 9.3E-43 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 Pfam PF07732 Multicopper oxidase 64 173 1.1E-41 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 PANTHER PTHR11709:SF33 59 218 4.1E-94 T 22-04-2016 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 PANTHER PTHR11709:SF33 259 371 4.1E-94 T 22-04-2016 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 PANTHER PTHR11709:SF33 488 630 4.1E-94 T 22-04-2016 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 Pfam PF00394 Multicopper oxidase 184 358 2.2E-29 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 Gene3D G3DSA:2.60.40.420 57 172 5.5E-36 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 Gene3D G3DSA:2.60.40.420 512 630 5.5E-28 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 SUPERFAMILY SSF49503 180 386 2.01E-48 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 ProSitePatterns PS00079 Multicopper oxidases signature 1. 608 628 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 11 630 1.1E-292 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 PANTHER PTHR11709 59 218 4.1E-94 T 22-04-2016 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 PANTHER PTHR11709 259 371 4.1E-94 T 22-04-2016 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 PANTHER PTHR11709 488 630 4.1E-94 T 22-04-2016 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 SUPERFAMILY SSF49503 469 630 2.17E-33 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 ProSitePatterns PS00080 Multicopper oxidases signature 2. 613 624 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RPIC_RS08435 21cdafb896037c5129ddb22862e57a80 631 SUPERFAMILY SSF49503 53 196 6.11E-41 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 PANTHER PTHR23508:SF11 24 430 1.3E-137 T 22-04-2016 RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 Pfam PF07690 Major Facilitator Superfamily 289 430 8.5E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 Gene3D G3DSA:1.20.1250.20 25 231 3.7E-24 T 22-04-2016 RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 Gene3D G3DSA:1.20.1250.20 247 430 7.6E-25 T 22-04-2016 RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 PANTHER PTHR23508 24 430 1.3E-137 T 22-04-2016 RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 Pfam PF00083 Sugar (and other) transporter 30 234 7.6E-19 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS13630 a48fff2806d10e74e4ef0afba5f2f9df 438 SUPERFAMILY SSF103473 24 433 3.53E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 SUPERFAMILY SSF51735 104 300 1.29E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 299 1.2E-56 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 Gene3D G3DSA:3.40.50.720 141 306 1.4E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 SUPERFAMILY SSF52283 2 137 1.06E-37 T 22-04-2016 RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 Gene3D G3DSA:3.40.50.720 1 140 6.1E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 PANTHER PTHR10996:SF161 1 325 1.9E-157 T 22-04-2016 RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 PANTHER PTHR10996 1 325 1.9E-157 T 22-04-2016 RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 329 1.9E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC_RS16865 576f566bbdddc38a6c844ad03a64a957 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RPIC_RS20380 f4c64ec9028e44461ab0b92f3fd5285c 120 SUPERFAMILY SSF56235 28 112 9.26E-6 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS20380 f4c64ec9028e44461ab0b92f3fd5285c 120 PANTHER PTHR11907 14 120 1.1E-29 T 22-04-2016 RPIC_RS20380 f4c64ec9028e44461ab0b92f3fd5285c 120 Gene3D G3DSA:3.60.20.10 9 114 8.4E-17 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS20380 f4c64ec9028e44461ab0b92f3fd5285c 120 PANTHER PTHR11907:SF10 14 120 1.1E-29 T 22-04-2016 RPIC_RS20380 f4c64ec9028e44461ab0b92f3fd5285c 120 Pfam PF13230 Glutamine amidotransferases class-II 1 118 7.6E-44 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 SUPERFAMILY SSF53697 101 272 5.66E-30 T 22-04-2016 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 PANTHER PTHR30514 8 286 5.3E-51 T 22-04-2016 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 PANTHER PTHR30514:SF1 8 286 5.3E-51 T 22-04-2016 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 Gene3D G3DSA:1.10.10.10 8 84 1.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 SUPERFAMILY SSF46689 7 81 8.96E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 81 1.3E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 Pfam PF01380 SIS domain 130 256 2.0E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC_RS16570 36d92f4cb5a7098995f366b057edb620 287 Gene3D G3DSA:3.40.50.10490 110 272 1.4E-28 T 22-04-2016 RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 PANTHER PTHR14084 3 410 3.1E-138 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 Gene3D G3DSA:3.40.640.10 43 257 5.5E-23 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 Gene3D G3DSA:3.90.1150.10 258 417 1.3E-63 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 Pfam PF00266 Aminotransferase class-V 32 318 1.9E-15 T 22-04-2016 IPR000192 Aminotransferase class V domain RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 SUPERFAMILY SSF53383 4 401 9.0E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 TIGRFAM TIGR01814 kynureninase: kynureninase 9 401 5.0E-117 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 Hamap MF_01970 Kynureninase [kynU]. 4 400 34.588 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC_RS03470 b85c1fdcc86c717a8c1511e3978fe577 417 PIRSF PIRSF038800 1 408 1.8E-142 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 RPIC_RS04335 2dc0cf0a97bb407ae00df9ecada67fea 319 PANTHER PTHR32196:SF9 30 319 3.6E-78 T 22-04-2016 RPIC_RS04335 2dc0cf0a97bb407ae00df9ecada67fea 319 Gene3D G3DSA:3.40.50.2300 161 304 2.7E-42 T 22-04-2016 RPIC_RS04335 2dc0cf0a97bb407ae00df9ecada67fea 319 Pfam PF13407 Periplasmic binding protein domain 37 299 1.6E-50 T 22-04-2016 IPR025997 Periplasmic binding protein RPIC_RS04335 2dc0cf0a97bb407ae00df9ecada67fea 319 SUPERFAMILY SSF53822 17 318 5.22E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS04335 2dc0cf0a97bb407ae00df9ecada67fea 319 PANTHER PTHR32196 30 319 3.6E-78 T 22-04-2016 RPIC_RS04335 2dc0cf0a97bb407ae00df9ecada67fea 319 Gene3D G3DSA:3.40.50.2300 30 160 2.2E-37 T 22-04-2016 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 Gene3D G3DSA:1.25.40.10 52 181 4.7E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 PANTHER PTHR23083 59 182 8.3E-15 T 22-04-2016 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 SMART SM00028 113 146 38.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 SMART SM00028 79 112 72.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 SMART SM00028 147 175 32.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 Pfam PF13432 Tetratricopeptide repeat 52 102 9.2E-6 T 22-04-2016 RPIC_RS04980 6dfd7b71d5a64af8af24689cbce14f5b 216 SUPERFAMILY SSF48452 55 182 8.35E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS14590 3bd38223e3134bd7891f8959f390fc40 193 SUPERFAMILY SSF81342 20 190 4.32E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 RPIC_RS14590 3bd38223e3134bd7891f8959f390fc40 193 Pfam PF01292 Prokaryotic cytochrome b561 20 190 2.2E-29 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 RPIC_RS14590 3bd38223e3134bd7891f8959f390fc40 193 PANTHER PTHR30529 12 193 1.2E-55 T 22-04-2016 RPIC_RS14590 3bd38223e3134bd7891f8959f390fc40 193 PANTHER PTHR30529:SF5 12 193 1.2E-55 T 22-04-2016 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 PANTHER PTHR21299:SF1 1 283 1.4E-113 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 SUPERFAMILY SSF52374 1 283 8.44E-96 T 22-04-2016 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 Pfam PF02569 Pantoate-beta-alanine ligase 3 281 3.9E-97 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 282 1.3E-90 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 Hamap MF_00158 Pantothenate synthetase [panC]. 2 283 37.54 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 76 3.2E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 PANTHER PTHR21299 1 283 1.4E-113 T 22-04-2016 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 Gene3D G3DSA:3.30.1300.10 176 283 6.1E-28 T 22-04-2016 RPIC_RS12805 c48d5078fa990a313e168c20a37b01d3 283 Gene3D G3DSA:3.40.50.620 1 169 1.2E-72 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PANTHER PTHR24322:SF540 161 191 5.9E-23 T 22-04-2016 RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PANTHER PTHR24322:SF540 14 136 5.9E-23 T 22-04-2016 RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 Pfam PF00106 short chain dehydrogenase 11 197 2.8E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PANTHER PTHR24322 161 191 5.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 PANTHER PTHR24322 14 136 5.9E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 SUPERFAMILY SSF51735 10 237 1.5E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00600 d819c8989343c6012dbf82079618bc9a 237 Gene3D G3DSA:3.40.50.720 3 237 1.5E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 Gene3D G3DSA:3.30.1330.20 214 319 6.1E-44 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 PANTHER PTHR30314:SF3 4 397 9.7E-160 T 22-04-2016 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 Gene3D G3DSA:3.40.50.1440 16 213 1.4E-82 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 PANTHER PTHR30314 4 397 9.7E-160 T 22-04-2016 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.2E-45 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 SUPERFAMILY SSF55307 203 317 2.75E-39 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 SMART SM00865 206 324 4.2E-52 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 384 34.711 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 Pfam PF12327 FtsZ family, C-terminal domain 221 315 4.0E-31 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 SUPERFAMILY SSF52490 16 207 3.01E-60 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 172 2.1E-34 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 328 7.8E-117 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 RPIC_RS15200 8c510dfb22756f688d3e9bd18a7e595a 399 SMART SM00864 15 204 5.4E-98 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 RPIC_RS09805 3f543ad7b7c5c072e286f6562b93ec5b 105 PANTHER PTHR34205:SF1 3 103 4.2E-47 T 22-04-2016 RPIC_RS09805 3f543ad7b7c5c072e286f6562b93ec5b 105 PANTHER PTHR34205 3 103 4.2E-47 T 22-04-2016 RPIC_RS09805 3f543ad7b7c5c072e286f6562b93ec5b 105 Pfam PF06127 Protein of unknown function (DUF962) 10 102 1.3E-36 T 22-04-2016 IPR009305 Protein of unknown function DUF962 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 447 1.3E-84 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 Gene3D G3DSA:3.10.105.10 313 505 4.9E-53 T 22-04-2016 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 Gene3D G3DSA:3.90.76.10 46 195 1.3E-36 T 22-04-2016 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 PIRSF PIRSF002741 1 531 7.3E-93 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 SUPERFAMILY SSF53850 32 517 4.89E-125 T 22-04-2016 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 PANTHER PTHR30290 303 516 2.3E-119 T 22-04-2016 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 PANTHER PTHR30290 1 286 2.3E-119 T 22-04-2016 RPIC_RS18385 f2db8c0185836d39428a39519f0d0224 533 Gene3D G3DSA:3.40.190.10 196 312 3.5E-35 T 22-04-2016 RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 PANTHER PTHR24220:SF568 7 238 1.1E-122 T 22-04-2016 RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 PANTHER PTHR24220 7 238 1.1E-122 T 22-04-2016 RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 SUPERFAMILY SSF52540 5 236 8.38E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 Gene3D G3DSA:3.40.50.300 3 235 4.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 SMART SM00382 30 217 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 PIRSF PIRSF039137 1 238 5.5E-108 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 RPIC_RS13325 d5d889c22285cf3aa92e464803602726 238 Pfam PF00005 ABC transporter 22 166 1.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 Gene3D G3DSA:3.20.20.70 9 223 1.6E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 146 168 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 39 53 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 PANTHER PTHR11749 8 238 1.2E-115 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 12 222 1.4E-91 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 PIRSF PIRSF001461 7 239 5.9E-99 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 Pfam PF00834 Ribulose-phosphate 3 epimerase family 12 217 8.4E-88 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 RPIC_RS15410 c0923f1094fcafd22f578c950408c9ab 241 SUPERFAMILY SSF51366 10 222 2.67E-69 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 333 47.734 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PIRSF PIRSF500210 1 336 5.9E-130 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 Gene3D G3DSA:3.40.190.80 196 332 1.2E-58 T 22-04-2016 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 Gene3D G3DSA:3.30.540.10 4 194 5.3E-77 T 22-04-2016 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PIRSF PIRSF000904 1 337 1.1E-128 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 SUPERFAMILY SSF56655 2 331 3.52E-119 T 22-04-2016 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 193 7.6E-66 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 8.2E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 8.2E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 148 171 8.2E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 179 202 8.2E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 205 232 8.2E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 8.2E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 RPIC_RS11155 6723909053b42da8c7edf2b09bcd897f 338 PANTHER PTHR11556 4 336 1.8E-162 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 Gene3D G3DSA:3.30.565.10 300 445 2.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PANTHER PTHR24423 118 134 1.4E-70 T 22-04-2016 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PANTHER PTHR24423 168 444 1.4E-70 T 22-04-2016 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PANTHER PTHR24423:SF474 118 134 1.4E-70 T 22-04-2016 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PANTHER PTHR24423:SF474 168 444 1.4E-70 T 22-04-2016 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 Gene3D G3DSA:1.10.287.130 219 288 7.7E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 291 2.7E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 SMART SM00387 336 446 2.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 5.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 5.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 5.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 5.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 SUPERFAMILY SSF47384 211 290 1.77E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 445 8.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 SUPERFAMILY SSF55874 282 445 7.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS17970 a85da1a4e55ea80541da6cda13f7376e 446 SMART SM00388 227 292 6.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 Gene3D G3DSA:1.20.1300.10 3 133 2.9E-35 T 22-04-2016 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 SUPERFAMILY SSF81343 1 132 9.16E-29 T 22-04-2016 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 PANTHER PTHR10978 3 129 3.6E-15 T 22-04-2016 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 8 130 1.9E-35 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 PANTHER PTHR10978:SF4 3 129 3.6E-15 T 22-04-2016 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 128 1.3E-24 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RPIC_RS10575 7eaccb210b3a388c0fa727840078d847 136 PIRSF PIRSF000178 1 133 4.7E-31 T 22-04-2016 RPIC_RS12600 c8f74fc2a2c2369ed3253150a440ddfb 207 Pfam PF03458 UPF0126 domain 100 173 4.7E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RPIC_RS12600 c8f74fc2a2c2369ed3253150a440ddfb 207 Pfam PF03458 UPF0126 domain 12 82 2.5E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RPIC_RS12600 c8f74fc2a2c2369ed3253150a440ddfb 207 PANTHER PTHR30506:SF3 4 207 3.2E-52 T 22-04-2016 RPIC_RS12600 c8f74fc2a2c2369ed3253150a440ddfb 207 PANTHER PTHR30506 4 207 3.2E-52 T 22-04-2016 RPIC_RS04085 c9db3dc4cb07eb3c5f5672b88ae2ce08 192 PANTHER PTHR33567 23 192 1.8E-28 T 22-04-2016 RPIC_RS04085 c9db3dc4cb07eb3c5f5672b88ae2ce08 192 Pfam PF02417 Chromate transporter 23 180 7.6E-32 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PRINTS PR00045 Sigma-54 factor signature 419 430 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PRINTS PR00045 Sigma-54 factor signature 477 495 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PRINTS PR00045 Sigma-54 factor signature 403 415 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PRINTS PR00045 Sigma-54 factor signature 215 232 1.9E-29 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PANTHER PTHR32248 1 62 2.2E-149 T 22-04-2016 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PANTHER PTHR32248 82 503 2.2E-149 T 22-04-2016 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 Pfam PF04963 Sigma-54 factor, core binding domain 141 330 1.3E-55 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 501 3.8E-143 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 482 489 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 Pfam PF04552 Sigma-54, DNA binding domain 345 501 1.0E-67 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 391 410 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 PIRSF PIRSF000774 1 503 4.0E-154 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS01285 c54bfe2a9448917da8a34ed64da9f239 503 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.5E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 PANTHER PTHR30154 1 147 5.5E-61 T 22-04-2016 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 PANTHER PTHR30154:SF28 1 147 5.5E-61 T 22-04-2016 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 Gene3D G3DSA:1.10.10.10 4 54 7.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 SUPERFAMILY SSF54909 64 147 2.41E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 SUPERFAMILY SSF46785 2 62 2.21E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.9E-19 T 22-04-2016 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 7.8E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 Gene3D G3DSA:3.30.70.920 57 147 2.5E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 SMART SM00344 3 112 9.9E-37 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS03480 1cbbe7aca91f21fd65643340a0cc1455 175 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.6E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS03395 fad69a075364ed696560e42cba12d80f 161 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 5 137 1.7E-44 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RPIC_RS03395 fad69a075364ed696560e42cba12d80f 161 PANTHER PTHR15364 4 151 1.4E-48 T 22-04-2016 RPIC_RS03395 fad69a075364ed696560e42cba12d80f 161 Gene3D G3DSA:3.40.50.1810 3 140 8.4E-24 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 RPIC_RS03395 fad69a075364ed696560e42cba12d80f 161 PANTHER PTHR15364:SF1 4 151 1.4E-48 T 22-04-2016 RPIC_RS03395 fad69a075364ed696560e42cba12d80f 161 SUPERFAMILY SSF52309 3 158 1.37E-44 T 22-04-2016 RPIC_RS00615 3f534840deb6ba335419159b7e14867f 611 PIRSF PIRSF000719 7 593 6.0E-284 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC_RS00615 3f534840deb6ba335419159b7e14867f 611 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 584 3.9E-255 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC_RS00615 3f534840deb6ba335419159b7e14867f 611 PANTHER PTHR39559 7 594 2.5E-150 T 22-04-2016 RPIC_RS00615 3f534840deb6ba335419159b7e14867f 611 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 591 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC_RS00615 3f534840deb6ba335419159b7e14867f 611 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 588 44.786 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 RPIC_RS03225 ddf2e679a2832fa4030e983ae1eb9da0 155 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 16 147 20.876 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RPIC_RS03225 ddf2e679a2832fa4030e983ae1eb9da0 155 Gene3D G3DSA:1.10.940.10 16 150 2.8E-37 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC_RS03225 ddf2e679a2832fa4030e983ae1eb9da0 155 SUPERFAMILY SSF48013 16 147 3.27E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC_RS03225 ddf2e679a2832fa4030e983ae1eb9da0 155 Pfam PF01029 NusB family 19 143 2.8E-31 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RPIC_RS03225 ddf2e679a2832fa4030e983ae1eb9da0 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 18 145 4.9E-37 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RPIC_RS03225 ddf2e679a2832fa4030e983ae1eb9da0 155 PANTHER PTHR11078 16 150 4.6E-34 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00941 Cadmium-transporting ATPase signature 225 237 6.3E-19 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00941 Cadmium-transporting ATPase signature 361 377 6.3E-19 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00941 Cadmium-transporting ATPase signature 34 43 6.3E-19 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00941 Cadmium-transporting ATPase signature 279 299 6.3E-19 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00941 Cadmium-transporting ATPase signature 208 225 6.3E-19 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00941 Cadmium-transporting ATPase signature 380 394 6.3E-19 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 498 504 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Gene3D G3DSA:3.40.1110.10 511 622 8.4E-16 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Pfam PF00122 E1-E2 ATPase 265 487 2.0E-67 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF56784 553 794 2.06E-52 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF56784 495 514 2.06E-52 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 226 796 7.0E-122 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Gene3D G3DSA:2.70.150.10 244 396 3.9E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PANTHER PTHR24093:SF317 28 791 3.7E-269 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF55008 104 170 6.15E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Gene3D G3DSA:3.30.70.100 105 169 4.5E-9 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Gene3D G3DSA:3.30.70.100 30 95 1.4E-7 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 6.3E-23 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 496 510 6.3E-23 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 345 359 6.3E-23 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 6.3E-23 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 652 6.3E-23 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF55008 30 97 2.36E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Pfam PF00403 Heavy-metal-associated domain 34 89 5.2E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 PANTHER PTHR24093 28 791 3.7E-269 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF81653 297 395 7.06E-25 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 595 778 5.0E-38 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 267 515 3.0E-39 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF81665 396 488 7.72E-17 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 SUPERFAMILY SSF81665 244 298 7.72E-17 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Pfam PF00702 haloacid dehalogenase-like hydrolase 493 708 3.2E-42 T 22-04-2016 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 797 1.5E-176 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Gene3D G3DSA:3.40.50.1000 623 762 1.3E-40 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS08075 3f8e94bda7b2d7f24c432844773bf18a 800 Gene3D G3DSA:3.40.50.1000 469 510 1.3E-40 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 PANTHER PTHR11746 131 191 1.3E-19 T 22-04-2016 RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 PIRSF PIRSF006305 1 196 2.2E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 SUPERFAMILY SSF52972 7 191 3.2E-57 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 190 1.0E-45 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 PANTHER PTHR11746:SF102 131 191 1.3E-19 T 22-04-2016 RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 Gene3D G3DSA:3.90.950.10 7 194 2.0E-55 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 Pfam PF02545 Maf-like protein 9 191 7.7E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS04480 b46fb730b331b5c1e04afdcfb7535520 198 Hamap MF_00528 Septum formation protein Maf [maf]. 8 196 30.073 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 Gene3D G3DSA:3.40.1050.10 3 208 3.3E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 PANTHER PTHR11002 3 209 1.6E-110 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 SUPERFAMILY SSF53056 3 211 5.63E-74 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 Pfam PF00484 Carbonic anhydrase 38 189 3.7E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 PANTHER PTHR11002:SF20 3 209 1.6E-110 T 22-04-2016 RPIC_RS00610 7126cf135e503c51bc1b6ba99debfded 226 SMART SM00947 31 194 1.0E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 Pfam PF00293 NUDIX domain 38 141 3.9E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 PRINTS PR00502 NUDIX hydrolase family signature 65 79 1.5E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 PRINTS PR00502 NUDIX hydrolase family signature 79 94 1.5E-5 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 PANTHER PTHR22769 1 167 1.6E-74 T 22-04-2016 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 PANTHER PTHR22769:SF17 1 167 1.6E-74 T 22-04-2016 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 Pfam PF14803 Nudix N-terminal 2 34 8.8E-17 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 Gene3D G3DSA:2.20.70.10 1 34 1.2E-18 T 22-04-2016 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 SUPERFAMILY SSF55811 2 162 1.34E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS09475 c80b8005e7edcb94fbfe4a31f0e8c1e6 195 Gene3D G3DSA:3.90.79.10 36 165 3.8E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 Pfam PF04545 Sigma-70, region 4 161 210 1.5E-14 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 Pfam PF04542 Sigma-70 region 2 53 120 4.5E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 SUPERFAMILY SSF88946 28 130 2.67E-26 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 PANTHER PTHR30173:SF31 24 212 1.5E-49 T 22-04-2016 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 SUPERFAMILY SSF88659 135 212 9.53E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 PANTHER PTHR30173 24 212 1.5E-49 T 22-04-2016 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 Gene3D G3DSA:1.10.1740.10 29 135 1.7E-26 T 22-04-2016 RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 Gene3D G3DSA:1.10.10.10 153 213 1.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12680 ecf4fecd0dbfe412d135d18c688bc5e3 215 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 212 8.5E-28 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 SUPERFAMILY SSF74863 47 165 1.44E-30 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 Pfam PF11412 Disulphide bond corrector protein DsbC 49 164 2.5E-30 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 Pfam PF13899 Thioredoxin-like 531 610 1.3E-13 T 22-04-2016 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 Gene3D G3DSA:2.60.40.1250 45 166 6.3E-37 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 PANTHER PTHR32234 186 643 4.6E-104 T 22-04-2016 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 PANTHER PTHR32234 26 154 4.6E-104 T 22-04-2016 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 PANTHER PTHR32234:SF0 186 643 4.6E-104 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 PANTHER PTHR32234:SF0 26 154 4.6E-104 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 ProSitePatterns PS00194 Thioredoxin family active site. 548 566 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 SUPERFAMILY SSF52833 538 636 1.12E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08790 6b5bc701c71713447c9f09e448727fc2 645 Gene3D G3DSA:3.40.30.10 527 638 1.0E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS05115 068e946074e153779f281118da7566ca 457 Pfam PF02954 Bacterial regulatory protein, Fis family 409 446 9.5E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS05115 068e946074e153779f281118da7566ca 457 SUPERFAMILY SSF52540 149 389 2.58E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05115 068e946074e153779f281118da7566ca 457 Gene3D G3DSA:3.40.50.300 146 320 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05115 068e946074e153779f281118da7566ca 457 PANTHER PTHR32071:SF34 35 451 3.2E-140 T 22-04-2016 RPIC_RS05115 068e946074e153779f281118da7566ca 457 SUPERFAMILY SSF46689 361 448 7.89E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05115 068e946074e153779f281118da7566ca 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 RPIC_RS05115 068e946074e153779f281118da7566ca 457 SMART SM00382 168 311 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05115 068e946074e153779f281118da7566ca 457 PANTHER PTHR32071 35 451 3.2E-140 T 22-04-2016 RPIC_RS05115 068e946074e153779f281118da7566ca 457 Gene3D G3DSA:1.10.10.60 405 448 5.4E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05115 068e946074e153779f281118da7566ca 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site RPIC_RS05115 068e946074e153779f281118da7566ca 457 Gene3D G3DSA:1.10.8.60 321 391 7.2E-23 T 22-04-2016 RPIC_RS05115 068e946074e153779f281118da7566ca 457 Pfam PF00158 Sigma-54 interaction domain 149 314 5.2E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 RPIC_RS02980 bf853ebf735ca7f5e0b631d0b70cde55 165 SMART SM00448 40 153 3.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02980 bf853ebf735ca7f5e0b631d0b70cde55 165 PANTHER PTHR26402:SF568 40 157 2.3E-55 T 22-04-2016 RPIC_RS02980 bf853ebf735ca7f5e0b631d0b70cde55 165 Gene3D G3DSA:3.40.50.2300 38 161 4.0E-36 T 22-04-2016 RPIC_RS02980 bf853ebf735ca7f5e0b631d0b70cde55 165 Pfam PF00072 Response regulator receiver domain 42 154 2.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02980 bf853ebf735ca7f5e0b631d0b70cde55 165 PANTHER PTHR26402 40 157 2.3E-55 T 22-04-2016 RPIC_RS02980 bf853ebf735ca7f5e0b631d0b70cde55 165 SUPERFAMILY SSF52172 33 161 1.29E-37 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS00285 09d2e2b40f3e4a77d9751eb15d3f0bbd 315 Pfam PF01171 PP-loop family 34 195 1.1E-14 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RPIC_RS00285 09d2e2b40f3e4a77d9751eb15d3f0bbd 315 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 2 263 56.591 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 RPIC_RS00285 09d2e2b40f3e4a77d9751eb15d3f0bbd 315 PANTHER PTHR11807:SF16 6 257 3.5E-110 T 22-04-2016 RPIC_RS00285 09d2e2b40f3e4a77d9751eb15d3f0bbd 315 SUPERFAMILY SSF52402 13 227 4.82E-55 T 22-04-2016 RPIC_RS00285 09d2e2b40f3e4a77d9751eb15d3f0bbd 315 PANTHER PTHR11807 6 257 3.5E-110 T 22-04-2016 RPIC_RS00285 09d2e2b40f3e4a77d9751eb15d3f0bbd 315 Gene3D G3DSA:3.40.50.620 15 199 2.1E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 Pfam PF01782 RimM N-terminal domain 17 105 3.2E-17 T 22-04-2016 IPR002676 RimM protein GO:0006364 RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 Gene3D G3DSA:2.30.30.240 114 184 1.3E-23 T 22-04-2016 RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 Gene3D G3DSA:2.40.30.60 10 108 8.8E-27 T 22-04-2016 IPR002676 RimM protein GO:0006364 RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 SUPERFAMILY SSF50447 14 108 5.65E-14 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 PANTHER PTHR33692 11 183 1.5E-35 T 22-04-2016 RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 SUPERFAMILY SSF50346 114 181 9.03E-18 T 22-04-2016 IPR011033 PRC-barrel-like RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 Pfam PF05239 PRC-barrel domain 112 179 1.9E-8 T 22-04-2016 IPR027275 PRC-barrel domain RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 181 7.2E-39 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RPIC_RS03945 a1ce92feccb9b7c6ca14e7d147a9ac95 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 21.597 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 SUPERFAMILY SSF52833 1 95 7.33E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 Gene3D G3DSA:1.20.1050.10 87 211 1.1E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 SUPERFAMILY SSF47616 72 204 4.83E-19 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 PANTHER PTHR11260 1 201 5.0E-23 T 22-04-2016 RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 74 5.4E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 Pfam PF13410 Glutathione S-transferase, C-terminal domain 123 186 4.9E-7 T 22-04-2016 RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 PANTHER PTHR11260:SF285 1 201 5.0E-23 T 22-04-2016 RPIC_RS10650 25fcd2bca7c71fd19f2a341256dc2fd4 217 Gene3D G3DSA:3.40.30.10 1 86 1.9E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 Gene3D G3DSA:3.40.50.2300 1 120 1.2E-38 T 22-04-2016 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 SUPERFAMILY SSF52172 1 118 5.69E-39 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 PANTHER PTHR26402:SF575 1 222 7.9E-105 T 22-04-2016 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 SMART SM00862 146 221 4.8E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 Gene3D G3DSA:1.10.10.10 126 224 2.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 6.5E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 2.5E-107 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 PANTHER PTHR26402 1 222 7.9E-105 T 22-04-2016 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 Pfam PF00072 Response regulator receiver domain 4 113 3.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 SUPERFAMILY SSF46894 123 223 9.35E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS08730 d3086fe311cef77ba0d995e37af7cc1c 228 SMART SM00448 1 112 1.2E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09530 bb198adea4e4fe31a593222acd8d49c2 305 PANTHER PTHR32322:SF11 7 304 1.4E-101 T 22-04-2016 RPIC_RS09530 bb198adea4e4fe31a593222acd8d49c2 305 PANTHER PTHR32322 7 304 1.4E-101 T 22-04-2016 RPIC_RS09530 bb198adea4e4fe31a593222acd8d49c2 305 SUPERFAMILY SSF103481 51 159 2.09E-9 T 22-04-2016 RPIC_RS09530 bb198adea4e4fe31a593222acd8d49c2 305 SUPERFAMILY SSF103481 210 304 1.27E-13 T 22-04-2016 RPIC_RS09530 bb198adea4e4fe31a593222acd8d49c2 305 Pfam PF00892 EamA-like transporter family 173 303 1.3E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS09530 bb198adea4e4fe31a593222acd8d49c2 305 Pfam PF00892 EamA-like transporter family 24 157 1.3E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 Gene3D G3DSA:3.10.310.10 1 120 1.4E-55 T 22-04-2016 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 PANTHER PTHR31689 1 287 1.0E-126 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 Gene3D G3DSA:3.10.310.10 121 271 5.6E-50 T 22-04-2016 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 Pfam PF01678 Diaminopimelate epimerase 5 125 6.5E-34 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 Pfam PF01678 Diaminopimelate epimerase 161 275 8.4E-29 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 SUPERFAMILY SSF54506 3 283 6.65E-53 T 22-04-2016 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 283 39.635 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 281 1.7E-87 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS00180 2c4d0477609af104ca63e5d72babb69a 292 PANTHER PTHR31689:SF0 1 287 1.0E-126 T 22-04-2016 RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.7E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 3.7E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.7E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 SUPERFAMILY SSF52768 2 306 4.51E-107 T 22-04-2016 RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 PANTHER PTHR10625 1 304 3.8E-101 T 22-04-2016 IPR000286 Histone deacetylase superfamily RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 Pfam PF00850 Histone deacetylase domain 20 304 8.5E-85 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC_RS03865 344eca11b4f9c6e3d2a5b2f7008729fa 307 Gene3D G3DSA:3.40.800.20 3 305 3.0E-109 T 22-04-2016 IPR023801 Histone deacetylase domain RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 Pfam PF04055 Radical SAM superfamily 33 176 4.8E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 Pfam PF13394 4Fe-4S single cluster domain 36 111 1.2E-5 T 22-04-2016 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 400 185.432 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 SUPERFAMILY SSF102114 25 331 1.31E-70 T 22-04-2016 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 PIRSF PIRSF037420 14 367 1.7E-111 T 22-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 PANTHER PTHR11228 21 359 9.0E-97 T 22-04-2016 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 23 367 5.1E-158 T 22-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 SMART SM00729 27 226 0.0033 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 PANTHER PTHR11228:SF32 21 359 9.0E-97 T 22-04-2016 RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 258 349 4.9E-9 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 Pfam PF13186 Iron-sulfur cluster-binding domain 256 322 7.7E-9 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain RPIC_RS12285 c338b171eabb96b2953d0aa1859d62d0 400 Gene3D G3DSA:3.20.20.70 24 340 1.1E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 3.2E-64 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 SUPERFAMILY SSF54211 85 165 1.24E-26 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.336 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 Gene3D G3DSA:3.30.230.10 81 165 8.8E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 PANTHER PTHR13718 15 170 3.1E-68 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 81 5.3E-25 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 Gene3D G3DSA:3.30.160.20 15 79 2.1E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 3.9E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16195 5057eb90256253ab47ca621bb1228a7c 172 SUPERFAMILY SSF54768 13 82 2.93E-21 T 22-04-2016 RPIC_RS17850 bd7383fdccd589222acb6957f844948e 199 Pfam PF00857 Isochorismatase family 16 190 9.1E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC_RS17850 bd7383fdccd589222acb6957f844948e 199 SUPERFAMILY SSF52499 10 197 2.49E-47 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC_RS17850 bd7383fdccd589222acb6957f844948e 199 Gene3D G3DSA:3.40.50.850 9 194 3.3E-50 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC_RS17850 bd7383fdccd589222acb6957f844948e 199 PANTHER PTHR11080 11 197 1.0E-58 T 22-04-2016 RPIC_RS17850 bd7383fdccd589222acb6957f844948e 199 PANTHER PTHR11080:SF37 11 197 1.0E-58 T 22-04-2016 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 Pfam PF00977 Histidine biosynthesis protein 5 239 6.7E-90 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 SUPERFAMILY SSF51366 1 255 7.38E-86 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 Gene3D G3DSA:3.20.20.70 4 256 4.8E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 PANTHER PTHR21235:SF2 1 258 1.9E-128 T 22-04-2016 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 49.411 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 PANTHER PTHR21235 1 258 1.9E-128 T 22-04-2016 RPIC_RS15910 8571020a8bc6b4f6d3734a5f7ceb04c0 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 4.1E-115 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 RPIC_RS15830 c2a78d44fe500c6dd5aab13aa7455176 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 247 2.1E-59 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC_RS15830 c2a78d44fe500c6dd5aab13aa7455176 248 PANTHER PTHR13799 1 244 2.3E-72 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC_RS15830 c2a78d44fe500c6dd5aab13aa7455176 248 Gene3D G3DSA:3.40.1390.30 1 107 6.3E-34 T 22-04-2016 RPIC_RS15830 c2a78d44fe500c6dd5aab13aa7455176 248 SUPERFAMILY SSF102705 1 247 5.1E-78 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC_RS15830 c2a78d44fe500c6dd5aab13aa7455176 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 236 5.1E-56 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RPIC_RS15830 c2a78d44fe500c6dd5aab13aa7455176 248 Gene3D G3DSA:3.40.1390.30 108 215 1.3E-29 T 22-04-2016 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-24 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 SUPERFAMILY SSF53850 87 270 2.72E-33 T 22-04-2016 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 Gene3D G3DSA:1.10.10.10 1 83 4.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 PANTHER PTHR30346:SF0 1 296 1.5E-92 T 22-04-2016 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 PANTHER PTHR30346 1 296 1.5E-92 T 22-04-2016 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 SUPERFAMILY SSF46785 1 85 7.12E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 Gene3D G3DSA:3.40.190.10 175 267 7.2E-38 T 22-04-2016 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 Gene3D G3DSA:3.40.190.10 91 174 5.6E-33 T 22-04-2016 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-11 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06750 8e3f4abfad20241c5f3dafc2a391fc0f 303 Pfam PF03466 LysR substrate binding domain 87 273 1.4E-37 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-37 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-24 T 22-04-2016 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.3E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 SMART SM01387 8 88 2.5E-52 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 SUPERFAMILY SSF47060 4 89 5.59E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.848 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 PANTHER PTHR23321 6 88 6.3E-42 T 22-04-2016 RPIC_RS10920 362fe59783376f0e61d0f95e9cc1c149 89 Gene3D G3DSA:1.10.287.10 5 89 2.1E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 RPIC_RS16000 f2c595af3dd81c3b05093ea009a970fb 346 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 339 9.1E-52 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC_RS16000 f2c595af3dd81c3b05093ea009a970fb 346 PIRSF PIRSF017082 11 343 3.2E-53 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC_RS16000 f2c595af3dd81c3b05093ea009a970fb 346 SUPERFAMILY SSF53850 51 257 3.08E-7 T 22-04-2016 RPIC_RS16000 f2c595af3dd81c3b05093ea009a970fb 346 PANTHER PTHR30349:SF32 19 301 6.6E-52 T 22-04-2016 RPIC_RS16000 f2c595af3dd81c3b05093ea009a970fb 346 PANTHER PTHR30349 19 301 6.6E-52 T 22-04-2016 RPIC_RS10395 cc023e5bf7a6d729ef487eaf41ce10dc 338 PANTHER PTHR30217 1 225 4.4E-146 T 22-04-2016 RPIC_RS10395 cc023e5bf7a6d729ef487eaf41ce10dc 338 PANTHER PTHR30217 247 337 4.4E-146 T 22-04-2016 RPIC_RS10395 cc023e5bf7a6d729ef487eaf41ce10dc 338 PANTHER PTHR30217:SF3 1 225 4.4E-146 T 22-04-2016 RPIC_RS10395 cc023e5bf7a6d729ef487eaf41ce10dc 338 PANTHER PTHR30217:SF3 247 337 4.4E-146 T 22-04-2016 RPIC_RS10395 cc023e5bf7a6d729ef487eaf41ce10dc 338 Pfam PF01136 Peptidase family U32 83 337 9.7E-66 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS10395 cc023e5bf7a6d729ef487eaf41ce10dc 338 ProSitePatterns PS01276 Peptidase family U32 signature. 168 186 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 137 234 8.2E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 SUPERFAMILY SSF47203 248 403 9.5E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 133 4.3E-11 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 250 398 3.7E-35 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 Gene3D G3DSA:1.20.140.10 240 404 2.7E-45 T 22-04-2016 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 Gene3D G3DSA:1.10.540.10 1 135 1.4E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 Gene3D G3DSA:2.40.110.10 136 239 8.6E-39 T 22-04-2016 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 SUPERFAMILY SSF56645 2 263 4.19E-63 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 PANTHER PTHR10909:SF282 1 417 1.0E-218 T 22-04-2016 RPIC_RS10700 d6e659ee70f8f6c8341a774c619f1bf9 419 PANTHER PTHR10909 1 417 1.0E-218 T 22-04-2016 RPIC_RS14855 f504674be786fa00536ac825d1db8bce 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 157 3.0E-46 T 22-04-2016 IPR008136 CinA, C-terminal RPIC_RS14855 f504674be786fa00536ac825d1db8bce 166 Gene3D G3DSA:3.90.950.20 7 163 2.3E-60 T 22-04-2016 IPR008136 CinA, C-terminal RPIC_RS14855 f504674be786fa00536ac825d1db8bce 166 Pfam PF02464 Competence-damaged protein 9 160 8.1E-61 T 22-04-2016 IPR008136 CinA, C-terminal RPIC_RS14855 f504674be786fa00536ac825d1db8bce 166 SUPERFAMILY SSF142433 7 161 6.02E-57 T 22-04-2016 IPR008136 CinA, C-terminal RPIC_RS14855 f504674be786fa00536ac825d1db8bce 166 PANTHER PTHR13939 7 165 1.2E-64 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PANTHER PTHR11444 1 445 7.2E-179 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PANTHER PTHR11444:SF21 1 445 7.2E-179 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 Gene3D G3DSA:1.10.275.10 9 102 2.8E-35 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 SMART SM00998 363 445 5.6E-21 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 2.1E-5 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00145 Argininosuccinate lyase family signature 230 254 2.1E-5 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00145 Argininosuccinate lyase family signature 275 291 2.1E-5 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 Pfam PF00206 Lyase 11 300 2.3E-51 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 Pfam PF10397 Adenylosuccinate lyase C-terminus 364 444 2.0E-17 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 ProSitePatterns PS00163 Fumarate lyases signature. 275 284 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00149 Fumarate lyase superfamily signature 230 257 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 3.0E-20 T 22-04-2016 IPR000362 Fumarate lyase family RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 Gene3D G3DSA:1.10.40.30 369 445 1.4E-28 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 SUPERFAMILY SSF48557 5 449 1.12E-112 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 Gene3D G3DSA:1.20.200.10 103 368 5.5E-86 T 22-04-2016 RPIC_RS12110 e6f2a8380de7a1c9682b6f2649e86f9d 453 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 5 348 1.3E-144 T 22-04-2016 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PANTHER PTHR24322 173 203 7.0E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PANTHER PTHR24322 25 157 7.0E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 Gene3D G3DSA:3.40.50.720 21 260 8.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 SUPERFAMILY SSF51735 20 261 8.11E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 27 259 1.3E-31 T 22-04-2016 RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PANTHER PTHR24322:SF211 173 203 7.0E-35 T 22-04-2016 RPIC_RS00230 ff6c14292487b79966305bb8491142d8 272 PANTHER PTHR24322:SF211 25 157 7.0E-35 T 22-04-2016 RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 Pfam PF13098 Thioredoxin-like domain 120 240 7.9E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 Gene3D G3DSA:3.10.450.70 35 96 1.1E-17 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 PANTHER PTHR35272 6 240 4.5E-39 T 22-04-2016 RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 Pfam PF10411 Disulfide bond isomerase protein N-terminus 39 91 1.9E-17 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 Gene3D G3DSA:3.40.30.10 117 243 5.9E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 SUPERFAMILY SSF54423 41 94 3.34E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal RPIC_RS15470 cb296bc2cbd7dbdd94f34dca5cbcdc6d 248 SUPERFAMILY SSF52833 101 242 1.01E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15600 e291b3aeb5651e27443e8da6f42aac94 209 SUPERFAMILY SSF81452 15 207 5.36E-58 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC_RS15600 e291b3aeb5651e27443e8da6f42aac94 209 Gene3D G3DSA:1.20.120.80 28 207 6.0E-53 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RPIC_RS15600 e291b3aeb5651e27443e8da6f42aac94 209 Pfam PF00510 Cytochrome c oxidase subunit III 22 207 2.3E-17 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC_RS15600 e291b3aeb5651e27443e8da6f42aac94 209 PANTHER PTHR11403 14 209 3.1E-107 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RPIC_RS15600 e291b3aeb5651e27443e8da6f42aac94 209 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 30 209 1.1E-81 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 RPIC_RS15600 e291b3aeb5651e27443e8da6f42aac94 209 PANTHER PTHR11403:SF2 14 209 3.1E-107 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 PANTHER PTHR24096 1 145 3.3E-150 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 PANTHER PTHR24096 173 560 3.3E-150 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Gene3D G3DSA:3.40.50.980 18 144 1.4E-40 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Gene3D G3DSA:3.40.50.980 189 220 1.4E-40 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 SUPERFAMILY SSF56801 16 559 4.84E-146 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 549 6.6E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Gene3D G3DSA:2.30.38.10 384 454 4.9E-25 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Gene3D G3DSA:3.30.300.30 462 559 5.5E-32 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Gene3D G3DSA:3.40.50.980 221 379 1.2E-38 T 22-04-2016 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 Pfam PF00501 AMP-binding enzyme 24 466 4.1E-96 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS18280 b641600e24d82e1f0b621c58230b0b2c 562 ProSitePatterns PS00455 Putative AMP-binding domain signature. 215 226 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 PANTHER PTHR23133:SF7 6 179 1.1E-67 T 22-04-2016 RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 146 5.9E-47 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 144 6.7E-35 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 PANTHER PTHR23133 6 179 1.1E-67 T 22-04-2016 RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 PIRSF PIRSF004682 1 180 6.0E-53 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 SUPERFAMILY SSF56784 5 179 5.1E-43 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 Gene3D G3DSA:3.40.50.1000 5 179 1.0E-51 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS01960 fb2cd6150afaf6a1bc6a207de02c3551 192 Pfam PF08645 Polynucleotide kinase 3 phosphatase 15 120 9.2E-10 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 PANTHER PTHR38779:SF1 8 128 9.9E-23 T 22-04-2016 RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 PANTHER PTHR38779 8 128 9.9E-23 T 22-04-2016 RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 Pfam PF13633 Prokaryotic N-terminal methylation site 11 35 2.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 Gene3D G3DSA:3.30.1300.30 44 116 2.8E-8 T 22-04-2016 RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 Pfam PF02501 Type II secretion system (T2SS), protein I 46 124 3.7E-21 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 1.2E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 SUPERFAMILY SSF54523 45 124 3.09E-18 T 22-04-2016 RPIC_RS16800 372e0f4260d96fed28fb24ed0142b87d 132 TIGRFAM TIGR01707 gspI: type II secretion system protein I 12 108 1.6E-22 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 SUPERFAMILY SSF54631 1 144 2.78E-28 T 22-04-2016 RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 Pfam PF00571 CBS domain 15 60 1.2E-8 T 22-04-2016 IPR000644 CBS domain RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 Pfam PF00571 CBS domain 73 126 1.3E-10 T 22-04-2016 IPR000644 CBS domain RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 SMART SM00116 79 126 1.1E-6 T 22-04-2016 IPR000644 CBS domain RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 SMART SM00116 13 60 1.4E-7 T 22-04-2016 IPR000644 CBS domain RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 PANTHER PTHR11911 1 141 8.9E-29 T 22-04-2016 RPIC_RS09790 33bf159e59951b309bc2a223389ac3b2 151 Gene3D G3DSA:3.10.580.10 1 127 1.2E-28 T 22-04-2016 RPIC_RS09010 8d7140b41200d0096f33332b44df35e0 128 Pfam PF04234 CopC domain 26 127 3.3E-23 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 RPIC_RS09010 8d7140b41200d0096f33332b44df35e0 128 Gene3D G3DSA:2.60.40.1220 25 128 2.6E-29 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like RPIC_RS09010 8d7140b41200d0096f33332b44df35e0 128 SUPERFAMILY SSF81296 25 128 2.73E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 Pfam PF02348 Cytidylyltransferase 7 233 3.4E-53 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 Gene3D G3DSA:3.90.550.10 6 260 1.5E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 PANTHER PTHR21485 6 261 6.4E-99 T 22-04-2016 RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 PANTHER PTHR21485:SF4 6 261 6.4E-99 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 6 252 3.5E-87 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 4 260 41.123 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 RPIC_RS13835 0f7fc449020d2e7212f2479406c8e0db 268 SUPERFAMILY SSF53448 6 264 9.3E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS15185 6cbe3a8d587a317daebd7552c4784bef 173 Pfam PF05258 Protein of unknown function (DUF721) 17 109 2.8E-6 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 PANTHER PTHR30579:SF4 1 274 1.8E-85 T 22-04-2016 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 Pfam PF03466 LysR substrate binding domain 89 276 2.8E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 Gene3D G3DSA:1.10.10.10 2 83 5.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 SUPERFAMILY SSF46785 4 112 2.52E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 PANTHER PTHR30579 1 274 1.8E-85 T 22-04-2016 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 Gene3D G3DSA:3.40.190.10 93 215 4.4E-16 T 22-04-2016 RPIC_RS05610 61dedf366b8ce1fbd38c1842312b5e15 289 SUPERFAMILY SSF53850 87 280 9.59E-24 T 22-04-2016 RPIC_RS15585 70ce7144438982574eed7c41088b98c6 74 Pfam PF09360 Iron-binding zinc finger CDGSH type 12 57 1.3E-17 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RPIC_RS15585 70ce7144438982574eed7c41088b98c6 74 SMART SM00704 26 62 3.6E-11 T 22-04-2016 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 PANTHER PTHR11451 1 26 2.5E-81 T 22-04-2016 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 124 264 1.5E-40 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 Gene3D G3DSA:1.10.1160.10 46 122 1.3E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 Gene3D G3DSA:3.40.50.620 2 45 1.1E-4 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 PANTHER PTHR11451:SF29 51 263 2.5E-81 T 22-04-2016 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 PANTHER PTHR11451:SF29 1 26 2.5E-81 T 22-04-2016 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 PANTHER PTHR11451 51 263 2.5E-81 T 22-04-2016 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 1 119 3.3E-25 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 Gene3D G3DSA:2.40.240.10 248 264 1.2E-4 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 SUPERFAMILY SSF52374 2 121 3.09E-24 T 22-04-2016 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 SUPERFAMILY SSF50715 124 264 1.31E-46 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RPIC_RS22040 484e7e4fd6debd7ccdb408be1d087e27 265 Gene3D G3DSA:2.40.240.10 132 247 2.1E-47 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 SMART SM00936 292 382 1.2E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 1.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 1.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 1.6E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 382 2.6E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 Gene3D G3DSA:2.60.410.10 292 382 1.7E-26 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 252 1.6E-75 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 Gene3D G3DSA:3.40.710.10 34 291 4.1E-93 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 SUPERFAMILY SSF56601 19 292 4.33E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 PANTHER PTHR21581 32 399 1.5E-98 T 22-04-2016 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 PANTHER PTHR21581:SF3 32 399 1.5E-98 T 22-04-2016 RPIC_RS00885 79f585279adf0e4068b4df6d75062de0 400 SUPERFAMILY SSF69189 292 384 6.28E-23 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 SMART SM00448 1 112 1.0E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 Pfam PF00072 Response regulator receiver domain 4 113 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 PANTHER PTHR26402:SF575 1 222 2.2E-106 T 22-04-2016 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 SUPERFAMILY SSF46894 126 222 2.75E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 Gene3D G3DSA:3.40.50.2300 1 120 1.9E-36 T 22-04-2016 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 Gene3D G3DSA:1.10.10.10 126 223 4.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 6.4E-107 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 PANTHER PTHR26402 1 222 2.2E-106 T 22-04-2016 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 SMART SM00862 146 221 1.8E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 2.9E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS09025 d6264c40c8c9f3ffcce406a8dde918ac 228 SUPERFAMILY SSF52172 1 118 5.12E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 SUPERFAMILY SSF53335 108 310 3.56E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 Gene3D G3DSA:3.40.50.150 107 312 2.5E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 PANTHER PTHR11579 94 309 1.2E-59 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 95 313 33.037 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 100 311 2.8E-52 T 22-04-2016 RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 231 246 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC_RS05210 62b1e0c7f2009c187497e94bd2062a6f 314 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 96 312 2.2E-54 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 RPIC_RS16085 62a888389fd8bf35441fb216952d817a 218 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 6 207 26.304 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 RPIC_RS16085 62a888389fd8bf35441fb216952d817a 218 PANTHER PTHR36964 4 215 1.4E-51 T 22-04-2016 RPIC_RS16085 62a888389fd8bf35441fb216952d817a 218 Pfam PF01794 Ferric reductase like transmembrane component 52 166 1.4E-17 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 Gene3D G3DSA:3.40.190.10 180 260 1.1E-25 T 22-04-2016 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.3E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 PANTHER PTHR30126:SF6 1 309 1.5E-130 T 22-04-2016 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 Pfam PF03466 LysR substrate binding domain 89 292 6.3E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 Gene3D G3DSA:3.40.190.10 91 179 4.2E-20 T 22-04-2016 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 SUPERFAMILY SSF46785 12 113 5.99E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 Gene3D G3DSA:1.10.10.10 1 81 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 PANTHER PTHR30126 1 309 1.5E-130 T 22-04-2016 RPIC_RS13255 c36f561a167ec51ace5c28c9ad063cce 313 SUPERFAMILY SSF53850 91 298 1.09E-41 T 22-04-2016 RPIC_RS17380 5d67fadf2de92b2403c90d7a56f1a3a4 315 SUPERFAMILY SSF53474 27 308 2.15E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17380 5d67fadf2de92b2403c90d7a56f1a3a4 315 Gene3D G3DSA:3.40.50.1820 2 308 8.4E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17380 5d67fadf2de92b2403c90d7a56f1a3a4 315 Pfam PF07859 alpha/beta hydrolase fold 79 288 8.1E-62 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC_RS17380 5d67fadf2de92b2403c90d7a56f1a3a4 315 PANTHER PTHR23024 33 305 4.1E-58 T 22-04-2016 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 3 93 1.4E-36 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 PANTHER PTHR33175:SF5 2 94 6.3E-40 T 22-04-2016 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 3 96 28.781 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 SUPERFAMILY SSF47729 3 93 2.36E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 SMART SM00411 3 93 1.6E-37 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 Gene3D G3DSA:4.10.520.10 3 93 9.9E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 PANTHER PTHR33175 2 94 6.3E-40 T 22-04-2016 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 1.9E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 1.9E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 1.9E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS03820 d5b7afde4ecb5c69b330937481755c9a 142 Pfam PF00216 Bacterial DNA-binding protein 3 92 7.3E-27 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS07550 ae3296db4bf65451a0ec57d8054f1773 237 SUPERFAMILY SSF54427 138 226 9.2E-10 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS07550 ae3296db4bf65451a0ec57d8054f1773 237 Pfam PF04335 VirB8 protein 28 234 2.0E-36 T 22-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.468 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 PANTHER PTHR23114 1 155 4.7E-36 T 22-04-2016 RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 Pfam PF00293 NUDIX domain 7 137 2.6E-22 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 Gene3D G3DSA:3.90.79.10 7 152 1.0E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 SUPERFAMILY SSF55811 6 160 9.07E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 PRINTS PR00502 NUDIX hydrolase family signature 33 47 6.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 PRINTS PR00502 NUDIX hydrolase family signature 47 62 6.0E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS15085 525810df9fe74ca40ae57e4c31a309d2 235 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 SUPERFAMILY SSF53850 109 300 1.27E-23 T 22-04-2016 RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 Gene3D G3DSA:1.10.10.10 40 95 2.0E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 PANTHER PTHR30126:SF16 40 300 2.0E-61 T 22-04-2016 RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 Gene3D G3DSA:3.40.190.10 102 204 8.3E-9 T 22-04-2016 RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 Pfam PF03466 LysR substrate binding domain 102 300 1.6E-21 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 PANTHER PTHR30126 40 300 2.0E-61 T 22-04-2016 RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 40 73 1.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS12570 0cd3d18da9e05e8b9a7eb8fa0062d5ac 302 SUPERFAMILY SSF46785 39 96 5.44E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS15635 d09894f595ae31c474945276a8799288 98 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 98 5.2E-20 T 22-04-2016 IPR007711 Toxin HigB-1 RPIC_RS15635 d09894f595ae31c474945276a8799288 98 SUPERFAMILY SSF143011 11 89 6.41E-9 T 22-04-2016 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 17 199 8.9E-26 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 SUPERFAMILY SSF56784 13 228 2.81E-52 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 2.5E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 109 122 2.5E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 14 25 2.5E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 2.5E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 Gene3D G3DSA:1.10.150.240 29 95 1.0E-11 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 Gene3D G3DSA:3.40.50.1000 6 28 6.0E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 Gene3D G3DSA:3.40.50.1000 100 228 6.0E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 PANTHER PTHR18901:SF9 1 228 1.6E-58 T 22-04-2016 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 PANTHER PTHR18901 1 228 1.6E-58 T 22-04-2016 RPIC_RS00585 65d13be4f2ad51dd363a4146098450a1 229 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 102 198 1.4E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 Gene3D G3DSA:1.20.5.100 212 239 7.7E-18 T 22-04-2016 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 SUPERFAMILY SSF52413 314 445 4.05E-39 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 2.8E-64 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 PANTHER PTHR11374 1 454 2.2E-242 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 431 1.7E-132 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 PANTHER PTHR11374:SF18 1 454 2.2E-242 T 22-04-2016 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 SUPERFAMILY SSF51735 1 200 1.4E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 Gene3D G3DSA:3.40.50.720 1 211 7.1E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 301 9.6E-37 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 Gene3D G3DSA:3.40.50.720 240 452 4.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 PIRSF PIRSF000124 1 450 2.0E-146 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 PIRSF PIRSF500134 1 453 4.7E-188 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 SUPERFAMILY SSF48179 209 306 1.0E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 434 3.3E-32 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC_RS03835 5d6099526f17db5e296761243c9d9e91 454 SMART SM00984 325 435 7.7E-49 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 SUPERFAMILY SSF52172 8 137 1.71E-22 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 SMART SM00421 169 226 2.0E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 SMART SM00448 9 126 1.2E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 Gene3D G3DSA:1.10.10.10 131 226 5.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 PANTHER PTHR26402:SF151 9 222 8.7E-42 T 22-04-2016 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 PANTHER PTHR26402 9 222 8.7E-42 T 22-04-2016 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 Pfam PF00072 Response regulator receiver domain 11 127 1.4E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 SUPERFAMILY SSF46894 169 227 5.1E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 Gene3D G3DSA:3.40.50.2300 7 130 4.7E-27 T 22-04-2016 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 ProSitePatterns PS00622 LuxR-type HTH domain signature. 186 213 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 Pfam PF00196 Bacterial regulatory proteins, luxR family 171 223 2.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 4.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 4.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16920 59ec9606f001115c019b91f0ae09e512 232 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 4.8E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS01445 969a359fea781df9489f5b66193b6e61 263 PANTHER PTHR19372:SF9 12 261 9.1E-94 T 22-04-2016 RPIC_RS01445 969a359fea781df9489f5b66193b6e61 263 PANTHER PTHR19372 12 261 9.1E-94 T 22-04-2016 RPIC_RS01445 969a359fea781df9489f5b66193b6e61 263 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 252 3.1E-32 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC_RS01445 969a359fea781df9489f5b66193b6e61 263 Gene3D G3DSA:3.90.420.10 105 261 3.5E-53 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC_RS01445 969a359fea781df9489f5b66193b6e61 263 SUPERFAMILY SSF56524 58 262 9.55E-64 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 SUPERFAMILY SSF52440 1 113 4.75E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 SMART SM00878 336 455 1.4E-55 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Pfam PF02785 Biotin carboxylase C-terminal domain 336 455 7.5E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 SUPERFAMILY SSF51230 590 670 5.89E-20 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Pfam PF00364 Biotin-requiring enzyme 604 667 1.7E-16 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Gene3D G3DSA:3.30.1490.20 129 202 1.4E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Gene3D G3DSA:3.40.50.20 1 128 2.3E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 7.6E-76 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 PANTHER PTHR18866:SF102 1 674 0.0 T 22-04-2016 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.4E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 PANTHER PTHR18866 1 674 0.0 T 22-04-2016 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 SUPERFAMILY SSF51246 331 461 2.46E-37 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 SUPERFAMILY SSF56059 83 348 2.3E-67 T 22-04-2016 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Gene3D G3DSA:2.40.50.100 599 670 5.7E-24 T 22-04-2016 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 Gene3D G3DSA:3.30.470.20 204 461 2.8E-102 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 SMART SM01209 114 293 0.0049 T 22-04-2016 RPIC_RS00555 b1dcba9dcd90fb2468b3da0dd8f0534c 674 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS01410 3928b2a8426ed00e4fb5beeea7c1b070 311 Gene3D G3DSA:3.60.15.10 4 311 1.8E-115 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS01410 3928b2a8426ed00e4fb5beeea7c1b070 311 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 5 311 5.3E-122 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RPIC_RS01410 3928b2a8426ed00e4fb5beeea7c1b070 311 SUPERFAMILY SSF56281 4 311 1.47E-58 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS01410 3928b2a8426ed00e4fb5beeea7c1b070 311 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 311 165.78 T 22-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 RPIC_RS01410 3928b2a8426ed00e4fb5beeea7c1b070 311 Pfam PF12706 Beta-lactamase superfamily domain 54 278 1.2E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 Pfam PF08534 Redoxin 46 163 9.7E-21 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 PANTHER PTHR10438 130 173 1.1E-18 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 PANTHER PTHR10438 57 102 1.1E-18 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 Gene3D G3DSA:3.40.30.10 6 173 1.6E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 SUPERFAMILY SSF52833 8 173 2.9E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 PANTHER PTHR10438:SF244 130 173 1.1E-18 T 22-04-2016 RPIC_RS14915 94d2d470222b918040ca88aa028445dc 174 PANTHER PTHR10438:SF244 57 102 1.1E-18 T 22-04-2016 RPIC_RS07195 8f83be7be98e2c67c1d8d4852f589c69 315 PANTHER PTHR11795 1 262 2.7E-74 T 22-04-2016 RPIC_RS07195 8f83be7be98e2c67c1d8d4852f589c69 315 PANTHER PTHR11795 289 313 2.7E-74 T 22-04-2016 RPIC_RS07195 8f83be7be98e2c67c1d8d4852f589c69 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 274 1.8E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS07195 8f83be7be98e2c67c1d8d4852f589c69 315 PANTHER PTHR11795:SF379 1 262 2.7E-74 T 22-04-2016 RPIC_RS07195 8f83be7be98e2c67c1d8d4852f589c69 315 PANTHER PTHR11795:SF379 289 313 2.7E-74 T 22-04-2016 RPIC_RS07760 407200276cda64a697184eac51e7c05d 396 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 171 307 1.6E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS07760 407200276cda64a697184eac51e7c05d 396 SUPERFAMILY SSF52540 157 372 2.96E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07760 407200276cda64a697184eac51e7c05d 396 PANTHER PTHR10046 175 310 3.5E-14 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 RPIC_RS07760 407200276cda64a697184eac51e7c05d 396 PANTHER PTHR10046:SF47 175 310 3.5E-14 T 22-04-2016 RPIC_RS07760 407200276cda64a697184eac51e7c05d 396 Gene3D G3DSA:3.40.50.300 152 348 1.0E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07760 407200276cda64a697184eac51e7c05d 396 SMART SM00382 167 312 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS00460 85394d68937f500fcb2457d6dfe65fcb 182 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 176 5.2E-48 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 RPIC_RS00460 85394d68937f500fcb2457d6dfe65fcb 182 SUPERFAMILY SSF52317 7 177 1.45E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS00460 85394d68937f500fcb2457d6dfe65fcb 182 PANTHER PTHR11019:SF115 4 173 9.9E-66 T 22-04-2016 RPIC_RS00460 85394d68937f500fcb2457d6dfe65fcb 182 Pfam PF01965 DJ-1/PfpI family 7 174 1.2E-46 T 22-04-2016 IPR002818 DJ-1/PfpI RPIC_RS00460 85394d68937f500fcb2457d6dfe65fcb 182 PANTHER PTHR11019 4 173 9.9E-66 T 22-04-2016 RPIC_RS00460 85394d68937f500fcb2457d6dfe65fcb 182 Gene3D G3DSA:3.40.50.880 5 181 1.0E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS04485 24137fe81c6193db2dc072185a86976d 178 Pfam PF02620 Uncharacterized ACR, COG1399 70 175 5.3E-21 T 22-04-2016 IPR003772 Protein of unknown function DUF177 RPIC_RS04485 24137fe81c6193db2dc072185a86976d 178 PANTHER PTHR38099 69 177 7.9E-18 T 22-04-2016 RPIC_RS15640 b8aa869800c43946093ac653f2c03f42 376 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 11 83 1.9E-15 T 22-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 RPIC_RS15640 b8aa869800c43946093ac653f2c03f42 376 SUPERFAMILY SSF47413 11 88 8.45E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS15640 b8aa869800c43946093ac653f2c03f42 376 SMART SM00530 15 70 2.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS15640 b8aa869800c43946093ac653f2c03f42 376 Gene3D G3DSA:1.10.260.40 8 87 1.9E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS15640 b8aa869800c43946093ac653f2c03f42 376 Pfam PF01381 Helix-turn-helix 16 69 7.7E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS15640 b8aa869800c43946093ac653f2c03f42 376 PANTHER PTHR36924 3 108 3.0E-16 T 22-04-2016 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 SUPERFAMILY SSF100950 2 226 6.28E-90 T 22-04-2016 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 Pfam PF01144 Coenzyme A transferase 6 217 6.5E-81 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 3.8E-77 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 Gene3D G3DSA:3.40.1080.10 2 215 1.5E-102 T 22-04-2016 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 PANTHER PTHR13707 1 230 1.3E-141 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 SMART SM00882 5 217 1.8E-94 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS09755 a759dcade646b79963c858bf2fac18c1 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 PANTHER PTHR30537 3 292 4.7E-81 T 22-04-2016 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 Gene3D G3DSA:3.40.190.10 97 182 1.1E-23 T 22-04-2016 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 SUPERFAMILY SSF46785 7 86 1.24E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 PANTHER PTHR30537:SF26 3 292 4.7E-81 T 22-04-2016 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 Gene3D G3DSA:1.10.10.10 8 88 3.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 SUPERFAMILY SSF53850 94 293 2.79E-33 T 22-04-2016 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 5.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 Gene3D G3DSA:3.40.190.10 183 261 1.4E-8 T 22-04-2016 RPIC_RS14295 cdc87b862ceee0b9fb53f04ed5f65c98 296 Pfam PF03466 LysR substrate binding domain 94 292 2.1E-34 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 31 392 39.332 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 SUPERFAMILY SSF52440 26 125 1.73E-27 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 PANTHER PTHR11609 11 397 3.2E-122 T 22-04-2016 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 SUPERFAMILY SSF51246 334 406 5.57E-16 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 Gene3D G3DSA:3.30.470.20 171 407 1.3E-81 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 PANTHER PTHR11609:SF5 11 397 3.2E-122 T 22-04-2016 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 Pfam PF02222 ATP-grasp domain 143 310 1.0E-44 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 32 395 1.8E-109 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 SUPERFAMILY SSF56059 129 330 1.21E-52 T 22-04-2016 RPIC_RS02435 6c1098c25b76e790a3a774b3cb211549 411 Gene3D G3DSA:3.40.50.20 26 137 2.0E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 Hamap MF_01694 Biotin synthase [bioB]. 25 333 42.601 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 PIRSF PIRSF001619 13 339 2.4E-135 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 PANTHER PTHR22976 22 331 4.5E-166 T 22-04-2016 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 SMART SM00876 240 332 1.6E-48 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 PANTHER PTHR22976:SF19 22 331 4.5E-166 T 22-04-2016 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 SMART SM00729 63 275 1.7E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 Gene3D G3DSA:3.20.20.70 26 332 3.1E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 Pfam PF04055 Radical SAM superfamily 70 221 4.1E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 TIGRFAM TIGR00433 bioB: biotin synthase 35 330 6.0E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 SUPERFAMILY SSF102114 26 331 9.55E-92 T 22-04-2016 RPIC_RS00560 a7b9eb8e45b931a8e877b90979afbad8 359 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 240 330 1.5E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Gene3D G3DSA:3.40.50.2300 581 710 1.3E-32 T 22-04-2016 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SUPERFAMILY SSF52172 583 703 1.42E-30 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SMART SM00388 316 381 5.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Pfam PF00072 Response regulator receiver domain 586 700 4.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Pfam PF01627 Hpt domain 726 802 2.9E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Gene3D G3DSA:3.40.190.10 149 208 2.6E-7 T 22-04-2016 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SUPERFAMILY SSF53850 38 266 4.39E-34 T 22-04-2016 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 264 4.1E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Gene3D G3DSA:1.10.287.130 312 377 8.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SMART SM00387 428 545 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Gene3D G3DSA:3.30.565.10 384 547 9.7E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Pfam PF00512 His Kinase A (phospho-acceptor) domain 317 380 2.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 PANTHER PTHR24423 569 748 5.2E-115 T 22-04-2016 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 PANTHER PTHR24423 314 548 5.2E-115 T 22-04-2016 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SMART SM00448 584 700 1.4E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SMART SM00062 45 268 1.1E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 543 9.4E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Gene3D G3DSA:1.20.120.160 716 803 1.2E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 523 2.2E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 542 2.2E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 484 2.2E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 498 2.2E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 Gene3D G3DSA:3.40.190.10 47 148 2.0E-15 T 22-04-2016 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SUPERFAMILY SSF47384 299 381 8.63E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SUPERFAMILY SSF55874 370 543 1.7E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03725 07d1f0a0e2f3172b4bc0f95e6237e7ac 812 SUPERFAMILY SSF47226 683 802 1.83E-15 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 RPIC_RS09660 7a23c16de618a6ff6f97714790eae512 111 PANTHER PTHR33930 3 105 3.6E-27 T 22-04-2016 RPIC_RS09660 7a23c16de618a6ff6f97714790eae512 111 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 38 88 1.4E-19 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS09660 7a23c16de618a6ff6f97714790eae512 111 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 103 1.3E-19 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS09660 7a23c16de618a6ff6f97714790eae512 111 PANTHER PTHR33930:SF2 3 105 3.6E-27 T 22-04-2016 RPIC_RS09660 7a23c16de618a6ff6f97714790eae512 111 Gene3D G3DSA:1.20.1290.10 4 108 2.8E-33 T 22-04-2016 IPR029032 AhpD-like RPIC_RS09660 7a23c16de618a6ff6f97714790eae512 111 SUPERFAMILY SSF69118 5 105 4.71E-26 T 22-04-2016 IPR029032 AhpD-like RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 Gene3D G3DSA:1.20.1300.10 10 121 2.9E-37 T 22-04-2016 RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 PANTHER PTHR38689 18 121 8.2E-28 T 22-04-2016 RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 PIRSF PIRSF000169 7 121 2.3E-41 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 PANTHER PTHR38689:SF1 18 121 8.2E-28 T 22-04-2016 RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 15 119 3.2E-39 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 SUPERFAMILY SSF81343 10 121 5.89E-31 T 22-04-2016 RPIC_RS10570 3a58f21dc4e06765d2cf454394a587ab 121 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 107 1.5E-15 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 RPIC_RS06245 42a1f62ba1a69001ff4d4480a76c1e4f 271 PIRSF PIRSF015853 1 271 9.2E-104 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RPIC_RS06245 42a1f62ba1a69001ff4d4480a76c1e4f 271 Pfam PF04951 D-aminopeptidase 1 261 3.7E-96 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RPIC_RS06245 42a1f62ba1a69001ff4d4480a76c1e4f 271 Gene3D G3DSA:3.40.50.10780 1 210 1.3E-78 T 22-04-2016 IPR027476 D-aminopeptidase, N-terminal RPIC_RS06245 42a1f62ba1a69001ff4d4480a76c1e4f 271 SUPERFAMILY SSF63992 1 271 1.01E-101 T 22-04-2016 IPR007035 Peptidase M55, D-aminopeptidase RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 Gene3D G3DSA:3.40.50.2300 3 156 1.8E-11 T 22-04-2016 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 Gene3D G3DSA:1.10.10.10 157 215 1.4E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 PANTHER PTHR26402:SF151 1 219 9.5E-25 T 22-04-2016 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 5.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 5.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 5.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 Pfam PF00072 Response regulator receiver domain 5 111 2.9E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 PANTHER PTHR26402 1 219 9.5E-25 T 22-04-2016 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 SUPERFAMILY SSF52172 2 123 4.27E-11 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 SMART SM00421 154 211 1.1E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 SUPERFAMILY SSF46894 147 215 6.8E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS05105 f86db491c790e0fec8404517a6457ad1 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 211 2.5E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS00565 6185c18ae5da1c6b13d2dc62bcd46db8 264 Gene3D G3DSA:3.90.226.10 4 202 2.8E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00565 6185c18ae5da1c6b13d2dc62bcd46db8 264 Gene3D G3DSA:1.10.12.10 205 260 6.3E-14 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC_RS00565 6185c18ae5da1c6b13d2dc62bcd46db8 264 PANTHER PTHR11941:SF86 1 260 1.2E-107 T 22-04-2016 RPIC_RS00565 6185c18ae5da1c6b13d2dc62bcd46db8 264 PANTHER PTHR11941 1 260 1.2E-107 T 22-04-2016 RPIC_RS00565 6185c18ae5da1c6b13d2dc62bcd46db8 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 1.2E-58 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS00565 6185c18ae5da1c6b13d2dc62bcd46db8 264 SUPERFAMILY SSF52096 3 260 1.14E-78 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS01660 104b5e6cd71f816891f3f5c66e6fe2d6 113 SMART SM00834 1 42 1.3E-20 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIC_RS01660 104b5e6cd71f816891f3f5c66e6fe2d6 113 PANTHER PTHR34404 2 59 2.4E-19 T 22-04-2016 RPIC_RS01660 104b5e6cd71f816891f3f5c66e6fe2d6 113 Pfam PF09723 Zinc ribbon domain 1 40 4.2E-17 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIC_RS01660 104b5e6cd71f816891f3f5c66e6fe2d6 113 PANTHER PTHR34404:SF2 2 59 2.4E-19 T 22-04-2016 RPIC_RS01660 104b5e6cd71f816891f3f5c66e6fe2d6 113 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 2.6E-23 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain RPIC_RS03285 8e23452ec1607eb702cd65545c95eb1f 344 Pfam PF16074 Type IV Pilus-assembly protein W 224 341 5.6E-26 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RPIC_RS03285 8e23452ec1607eb702cd65545c95eb1f 344 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 SUPERFAMILY SSF103473 25 208 1.01E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 SUPERFAMILY SSF103473 492 512 1.01E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 SUPERFAMILY SSF103473 271 446 1.01E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 Pfam PF07690 Major Facilitator Superfamily 31 412 2.0E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 Gene3D G3DSA:1.20.1250.20 283 447 5.9E-5 T 22-04-2016 RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 Gene3D G3DSA:1.20.1250.20 493 512 5.9E-5 T 22-04-2016 RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 Gene3D G3DSA:1.20.1250.20 28 208 4.3E-19 T 22-04-2016 RPIC_RS13610 6b5eaffe2668e5e5911c6710c780c84d 518 PANTHER PTHR23501 18 518 3.0E-42 T 22-04-2016 RPIC_RS00635 c254b56c5fb0941836310f69652c4964 128 PANTHER PTHR37811:SF2 14 128 6.5E-38 T 22-04-2016 RPIC_RS00635 c254b56c5fb0941836310f69652c4964 128 PANTHER PTHR37811 14 128 6.5E-38 T 22-04-2016 RPIC_RS00635 c254b56c5fb0941836310f69652c4964 128 Pfam PF03992 Antibiotic biosynthesis monooxygenase 26 103 4.4E-6 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIC_RS00635 c254b56c5fb0941836310f69652c4964 128 SUPERFAMILY SSF54909 18 126 5.9E-33 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS00635 c254b56c5fb0941836310f69652c4964 128 Gene3D G3DSA:3.30.70.900 45 126 7.7E-15 T 22-04-2016 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Gene3D G3DSA:3.10.20.30 2 102 8.9E-38 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 SUPERFAMILY SSF46548 103 230 2.96E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Gene3D G3DSA:1.10.1060.10 103 231 2.8E-48 T 22-04-2016 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 225 6.4E-86 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Pfam PF13534 4Fe-4S dicluster domain 143 216 2.5E-9 T 22-04-2016 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 SUPERFAMILY SSF54292 2 102 2.71E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 PANTHER PTHR11921:SF29 3 231 8.9E-133 T 22-04-2016 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 PANTHER PTHR11921 3 231 8.9E-133 T 22-04-2016 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 108 5.0E-33 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RPIC_RS10560 bfc6d7a346f35e0c1dd32b27e6b71eaf 233 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12445 520105c7c548bd1d5df6e87b4fb1e9a7 128 Pfam PF11162 Protein of unknown function (DUF2946) 12 122 2.3E-12 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 RPIC_RS17665 e83ead189b89f1c5e592de1d9f130c3b 84 Gene3D G3DSA:3.30.1070.10 35 83 6.1E-20 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC_RS17665 e83ead189b89f1c5e592de1d9f130c3b 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 1.4E-28 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC_RS17665 e83ead189b89f1c5e592de1d9f130c3b 84 SUPERFAMILY SSF55229 35 83 1.83E-14 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC_RS17665 e83ead189b89f1c5e592de1d9f130c3b 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.425 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC_RS17665 e83ead189b89f1c5e592de1d9f130c3b 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 2.2E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 RPIC_RS17665 e83ead189b89f1c5e592de1d9f130c3b 84 PANTHER PTHR33404 1 82 3.2E-21 T 22-04-2016 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Pfam PF01103 Surface antigen 454 765 2.9E-81 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 PANTHER PTHR12815 10 765 4.6E-234 T 22-04-2016 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 PANTHER PTHR12815:SF11 10 765 4.6E-234 T 22-04-2016 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 765 2.0E-278 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 PIRSF PIRSF006076 2 765 2.6E-255 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 7 765 25.59 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Pfam PF07244 Surface antigen variable number repeat 182 269 8.9E-21 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Pfam PF07244 Surface antigen variable number repeat 31 97 2.4E-5 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Pfam PF07244 Surface antigen variable number repeat 272 350 2.3E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Pfam PF07244 Surface antigen variable number repeat 353 427 2.3E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Pfam PF07244 Surface antigen variable number repeat 99 178 1.8E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 RPIC_RS06390 ecc835f26a76f8173e006aff812146dc 765 Gene3D G3DSA:2.40.160.50 402 765 4.6E-24 T 22-04-2016 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 SUPERFAMILY SSF50331 241 361 3.12E-15 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 Pfam PF00005 ABC transporter 25 166 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 Gene3D G3DSA:3.40.50.300 3 241 2.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 SUPERFAMILY SSF52540 8 247 3.82E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 PANTHER PTHR24220 9 320 4.1E-162 T 22-04-2016 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 39 331 3.6E-107 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 PANTHER PTHR24220:SF402 9 320 4.1E-162 T 22-04-2016 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 Pfam PF08402 TOBE domain 284 361 4.6E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC_RS07265 4a79e01fe5e33abfb56301c8fe5da6e5 362 SMART SM00382 33 217 9.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05425 17e5dde858443f0d49f425ae72c30edd 297 Gene3D G3DSA:3.40.50.1000 39 107 1.7E-20 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05425 17e5dde858443f0d49f425ae72c30edd 297 Gene3D G3DSA:3.40.50.1000 194 258 1.7E-20 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05425 17e5dde858443f0d49f425ae72c30edd 297 Pfam PF08282 haloacid dehalogenase-like hydrolase 43 109 6.9E-10 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS05425 17e5dde858443f0d49f425ae72c30edd 297 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 43 251 4.7E-38 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 RPIC_RS05425 17e5dde858443f0d49f425ae72c30edd 297 SUPERFAMILY SSF56784 38 285 1.2E-30 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS06040 59da2996fc013d96ce5688720a1edee7 270 SUPERFAMILY SSF161098 66 252 1.83E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06040 59da2996fc013d96ce5688720a1edee7 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 257 8.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06040 59da2996fc013d96ce5688720a1edee7 270 PANTHER PTHR30151:SF22 20 267 4.4E-151 T 22-04-2016 RPIC_RS06040 59da2996fc013d96ce5688720a1edee7 270 Gene3D G3DSA:1.10.3720.10 63 259 6.8E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06040 59da2996fc013d96ce5688720a1edee7 270 PANTHER PTHR30151 20 267 4.4E-151 T 22-04-2016 RPIC_RS06795 7a2769a7c33759d741116c5ba55934c1 398 Pfam PF03594 Benzoate membrane transport protein 16 391 4.4E-152 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RPIC_RS06795 7a2769a7c33759d741116c5ba55934c1 398 TIGRFAM TIGR00843 benE: benzoate transporter 19 393 4.4E-149 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RPIC_RS06795 7a2769a7c33759d741116c5ba55934c1 398 PANTHER PTHR30199 11 398 5.9E-128 T 22-04-2016 RPIC_RS06795 7a2769a7c33759d741116c5ba55934c1 398 PANTHER PTHR30199:SF0 11 398 5.9E-128 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 PANTHER PTHR30258 24 316 2.5E-89 T 22-04-2016 RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 Gene3D G3DSA:3.40.50.300 129 319 6.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 15 315 1.2E-122 T 22-04-2016 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 Gene3D G3DSA:3.30.450.90 28 119 2.6E-13 T 22-04-2016 RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 SUPERFAMILY SSF52540 11 290 7.25E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 Pfam PF00437 Type II/IV secretion system protein 27 293 2.7E-77 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS13025 fedec4cbe934b3d058e2bd7692280584 345 PANTHER PTHR30258:SF12 24 316 2.5E-89 T 22-04-2016 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 Pfam PF00301 Rubredoxin 10 55 9.3E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 PRINTS PR00163 Rubredoxin signature 39 55 3.7E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 PRINTS PR00163 Rubredoxin signature 9 25 3.7E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 SUPERFAMILY SSF57802 5 59 1.85E-23 T 22-04-2016 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 ProSitePatterns PS00202 Rubredoxin signature. 39 49 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 PIRSF PIRSF000071 1 60 4.8E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 RPIC_RS02975 89b2fb202c2bc3ab3af800bd3a899b02 60 Gene3D G3DSA:2.20.28.10 5 59 2.5E-26 T 22-04-2016 IPR004039 Rubredoxin-type fold RPIC_RS00275 af16923525932877e88e65b03c78976c 579 Pfam PF02321 Outer membrane efflux protein 175 366 1.4E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 Pfam PF02321 Outer membrane efflux protein 393 575 5.7E-30 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 110 577 1.7E-130 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 PANTHER PTHR30203 90 579 5.1E-99 T 22-04-2016 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 SUPERFAMILY SSF56954 166 579 3.27E-106 T 22-04-2016 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 SUPERFAMILY SSF56954 106 130 3.27E-106 T 22-04-2016 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 PANTHER PTHR30203:SF3 90 579 5.1E-99 T 22-04-2016 RPIC_RS00275 af16923525932877e88e65b03c78976c 579 Gene3D G3DSA:1.20.1600.10 164 579 1.2E-105 T 22-04-2016 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Gene3D G3DSA:3.30.70.240 399 478 1.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 SUPERFAMILY SSF50447 151 299 2.78E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PANTHER PTHR23115:SF14 4 593 9.8E-280 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 SUPERFAMILY SSF54980 302 387 9.35E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 599 1.2E-287 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 SUPERFAMILY SSF54980 398 513 1.2E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 153 1.5E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PANTHER PTHR23115 4 593 9.8E-280 T 22-04-2016 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 SUPERFAMILY SSF52540 4 206 5.75E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Pfam PF03144 Elongation factor Tu domain 2 218 289 3.4E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Gene3D G3DSA:3.40.50.300 3 204 6.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PRINTS PR00315 GTP-binding elongation factor signature 122 131 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PRINTS PR00315 GTP-binding elongation factor signature 50 58 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PRINTS PR00315 GTP-binding elongation factor signature 6 19 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PRINTS PR00315 GTP-binding elongation factor signature 86 97 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 PRINTS PR00315 GTP-binding elongation factor signature 70 80 5.5E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Pfam PF00679 Elongation factor G C-terminus 396 477 7.6E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Gene3D G3DSA:2.40.30.10 205 303 5.6E-23 T 22-04-2016 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 194 3.4E-55 T 22-04-2016 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Gene3D G3DSA:2.40.50.250 483 577 1.3E-41 T 22-04-2016 RPIC_RS05600 d2c1b4b2218901f52736f8d3be2fc696 606 Gene3D G3DSA:3.30.70.870 304 398 2.4E-38 T 22-04-2016 RPIC_RS11835 c90bcce1b6f07842dee780efb536bb51 355 Pfam PF13692 Glycosyl transferases group 1 195 312 1.7E-10 T 22-04-2016 RPIC_RS11835 c90bcce1b6f07842dee780efb536bb51 355 SUPERFAMILY SSF53756 3 347 4.13E-47 T 22-04-2016 RPIC_RS11835 c90bcce1b6f07842dee780efb536bb51 355 PANTHER PTHR12526 14 347 1.2E-28 T 22-04-2016 RPIC_RS11835 c90bcce1b6f07842dee780efb536bb51 355 PANTHER PTHR12526:SF397 14 347 1.2E-28 T 22-04-2016 RPIC_RS11835 c90bcce1b6f07842dee780efb536bb51 355 Gene3D G3DSA:3.40.50.2000 149 316 1.2E-16 T 22-04-2016 RPIC_RS11835 c90bcce1b6f07842dee780efb536bb51 355 Pfam PF13439 Glycosyltransferase Family 4 14 166 2.7E-16 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC_RS05205 d4a0a3f9a5667ff55264e6f673c5f467 251 PANTHER PTHR30457 1 248 2.6E-86 T 22-04-2016 RPIC_RS05205 d4a0a3f9a5667ff55264e6f673c5f467 251 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 251 39.193 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC_RS05205 d4a0a3f9a5667ff55264e6f673c5f467 251 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 237 2.5E-66 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC_RS05205 d4a0a3f9a5667ff55264e6f673c5f467 251 Pfam PF01975 Survival protein SurE 3 187 2.8E-57 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC_RS05205 d4a0a3f9a5667ff55264e6f673c5f467 251 Gene3D G3DSA:3.40.1210.10 1 249 2.2E-87 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC_RS05205 d4a0a3f9a5667ff55264e6f673c5f467 251 SUPERFAMILY SSF64167 1 249 2.75E-84 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.90.1170.50 13 138 3.5E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.365.10 139 193 2.1E-36 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.365.10 304 379 2.1E-36 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.365.10 474 656 8.5E-31 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 167 755 2.3E-140 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 PANTHER PTHR11908:SF76 22 480 4.7E-294 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 PANTHER PTHR11908:SF76 496 606 4.7E-294 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 PANTHER PTHR11908:SF76 633 821 4.7E-294 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 39 150 1.6E-28 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 PANTHER PTHR11908 22 480 4.7E-294 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 PANTHER PTHR11908 496 606 4.7E-294 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 PANTHER PTHR11908 633 821 4.7E-294 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.365.10 381 473 1.9E-60 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.365.10 670 814 1.9E-60 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 851 989 7.2E-26 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 SUPERFAMILY SSF56003 142 814 2.36E-162 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 SMART SM01008 39 150 4.4E-47 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 SUPERFAMILY SSF54665 17 171 1.57E-43 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.365.10 194 301 4.7E-22 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 SUPERFAMILY SSF55961 850 990 4.13E-38 T 22-04-2016 RPIC_RS10105 1473bf02fd788f68f960ea81e02835f1 1011 Gene3D G3DSA:3.30.530.20 850 996 3.4E-46 T 22-04-2016 IPR023393 START-like domain RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 Pfam PF00005 ABC transporter 23 167 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 SMART SM00382 32 206 1.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 PANTHER PTHR24220:SF568 9 239 6.3E-91 T 22-04-2016 RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 PANTHER PTHR24220 9 239 6.3E-91 T 22-04-2016 RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 Gene3D G3DSA:3.40.50.300 4 232 1.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07180 772dcf59d41312c80baa23d920059eac 239 SUPERFAMILY SSF52540 5 234 3.66E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12650 f4c93c44f510c2e57fa745af135f613c 397 Gene3D G3DSA:1.25.40.10 312 390 1.4E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS12650 f4c93c44f510c2e57fa745af135f613c 397 Pfam PF07219 HemY protein N-terminus 27 131 2.7E-25 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 RPIC_RS12650 f4c93c44f510c2e57fa745af135f613c 397 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 391 5.3E-132 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 RPIC_RS12650 f4c93c44f510c2e57fa745af135f613c 397 SUPERFAMILY SSF48452 254 391 1.08E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 PANTHER PTHR30012 2 403 3.3E-165 T 22-04-2016 RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 PANTHER PTHR30012:SF5 2 403 3.3E-165 T 22-04-2016 RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 2.0E-29 T 22-04-2016 IPR003004 GspF/PilC family RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 9.8E-172 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 Pfam PF00482 Type II secretion system (T2SS), protein F 272 394 6.4E-27 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS16840 74a0ceafe0970855697d76a195489e86 403 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 9.5E-33 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS10945 359f43801370c2c8b33150f81d1aa055 215 PANTHER PTHR35809 1 215 3.1E-65 T 22-04-2016 RPIC_RS10945 359f43801370c2c8b33150f81d1aa055 215 Pfam PF02666 Phosphatidylserine decarboxylase 44 209 1.9E-32 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RPIC_RS10945 359f43801370c2c8b33150f81d1aa055 215 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 9 213 7.1E-71 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RPIC_RS10945 359f43801370c2c8b33150f81d1aa055 215 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 9 215 38.508 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 PANTHER PTHR33164:SF16 1 162 3.2E-29 T 22-04-2016 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 PANTHER PTHR33164 1 162 3.2E-29 T 22-04-2016 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 Gene3D G3DSA:1.10.10.10 21 161 3.8E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 Pfam PF01047 MarR family 55 113 1.1E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 SUPERFAMILY SSF46785 22 161 1.95E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS16915 71a5b7cd84aaa38732a20d41f9ef723c 162 SMART SM00347 48 148 2.0E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 Gene3D G3DSA:3.40.50.720 3 257 2.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 SUPERFAMILY SSF51735 1 258 8.0E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 Pfam PF00106 short chain dehydrogenase 8 198 6.1E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.9E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PANTHER PTHR24319 1 258 7.7E-62 T 22-04-2016 RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.6E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 1.6E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.6E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.6E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS11740 e391bd6019abc91b64551dba0c33172f 263 PANTHER PTHR24319:SF23 1 258 7.7E-62 T 22-04-2016 RPIC_RS17365 d765e7e518535caa2d798082084da368 209 Gene3D G3DSA:1.20.1050.10 89 187 1.3E-34 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS17365 d765e7e518535caa2d798082084da368 209 Gene3D G3DSA:3.40.30.10 1 88 3.8E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17365 d765e7e518535caa2d798082084da368 209 SUPERFAMILY SSF52833 1 77 4.77E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17365 d765e7e518535caa2d798082084da368 209 SUPERFAMILY SSF47616 82 198 6.4E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS17365 d765e7e518535caa2d798082084da368 209 PANTHER PTHR11260 1 194 1.5E-57 T 22-04-2016 RPIC_RS17365 d765e7e518535caa2d798082084da368 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 104 188 4.7E-12 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS17365 d765e7e518535caa2d798082084da368 209 PANTHER PTHR11260:SF154 1 194 1.5E-57 T 22-04-2016 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 Gene3D G3DSA:3.40.190.10 166 261 1.0E-25 T 22-04-2016 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 SUPERFAMILY SSF46785 6 109 1.28E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 SUPERFAMILY SSF53850 90 294 4.71E-45 T 22-04-2016 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 Gene3D G3DSA:3.40.190.10 88 165 1.4E-8 T 22-04-2016 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 PANTHER PTHR30537 1 297 1.2E-164 T 22-04-2016 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 Pfam PF03466 LysR substrate binding domain 88 293 3.9E-42 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 PANTHER PTHR30537:SF13 1 297 1.2E-164 T 22-04-2016 RPIC_RS06570 bd99463bb2ffa9f0753c7cb592eb9944 300 Gene3D G3DSA:1.10.10.10 4 79 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01350 54908fb9f87ae17a8448a1adb767fc41 387 PANTHER PTHR23510 5 387 6.6E-113 T 22-04-2016 RPIC_RS01350 54908fb9f87ae17a8448a1adb767fc41 387 PANTHER PTHR23510:SF6 5 387 6.6E-113 T 22-04-2016 RPIC_RS01350 54908fb9f87ae17a8448a1adb767fc41 387 Gene3D G3DSA:1.20.1250.20 198 380 2.5E-20 T 22-04-2016 RPIC_RS01350 54908fb9f87ae17a8448a1adb767fc41 387 Gene3D G3DSA:1.20.1250.20 12 189 3.3E-29 T 22-04-2016 RPIC_RS01350 54908fb9f87ae17a8448a1adb767fc41 387 SUPERFAMILY SSF103473 9 380 2.49E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS01350 54908fb9f87ae17a8448a1adb767fc41 387 Pfam PF07690 Major Facilitator Superfamily 15 345 2.3E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 122 1.7E-32 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 Gene3D G3DSA:3.10.129.10 2 132 1.2E-51 T 22-04-2016 IPR029069 HotDog domain RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 PIRSF PIRSF003230 1 134 2.1E-44 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 PANTHER PTHR31793 3 132 1.8E-44 T 22-04-2016 RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 PANTHER PTHR31793:SF9 3 132 1.8E-44 T 22-04-2016 RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 3.3E-49 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 Pfam PF03061 Thioesterase superfamily 18 102 1.0E-18 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS03320 62bc757641f6ba4d1668a926bc59bba7 134 SUPERFAMILY SSF54637 2 131 1.14E-42 T 22-04-2016 IPR029069 HotDog domain RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Gene3D G3DSA:3.40.50.720 6 92 1.4E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 SUPERFAMILY SSF53623 91 312 9.55E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Pfam PF08245 Mur ligase middle domain 110 294 7.5E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 SUPERFAMILY SSF51984 6 92 2.35E-28 T 22-04-2016 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Gene3D G3DSA:3.90.190.20 316 464 2.1E-52 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 PANTHER PTHR23135 1 457 6.6E-198 T 22-04-2016 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 SUPERFAMILY SSF53244 313 459 9.89E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 PANTHER PTHR23135:SF5 1 457 6.6E-198 T 22-04-2016 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 468 43.4 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 460 1.2E-164 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Pfam PF01225 Mur ligase family, catalytic domain 8 105 1.4E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 404 6.7E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 RPIC_RS15220 696bed3756a9ce0b81ae07494d5b21f2 483 Gene3D G3DSA:3.40.1190.10 94 315 4.1E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 RPIC_RS05755 25e78022364fb3be2ec653611338a8fc 879 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 27 158 4.5E-18 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS05755 25e78022364fb3be2ec653611338a8fc 879 Pfam PF13946 Domain of unknown function (DUF4214) 691 742 7.0E-8 T 22-04-2016 IPR025282 Domain of unknown function DUF4214 RPIC_RS05755 25e78022364fb3be2ec653611338a8fc 879 Pfam PF05050 Methyltransferase FkbM domain 29 190 1.2E-21 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS05755 25e78022364fb3be2ec653611338a8fc 879 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 159 589 8.0E-10 T 22-04-2016 RPIC_RS05755 25e78022364fb3be2ec653611338a8fc 879 SUPERFAMILY SSF53335 25 167 3.82E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS05755 25e78022364fb3be2ec653611338a8fc 879 Gene3D G3DSA:3.40.50.150 27 164 7.1E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15305 13359bd911331a1bed45f70393104e3d 365 PIRSF PIRSF029285 1 355 2.3E-160 T 22-04-2016 IPR014553 Predicted aminopeptidase RPIC_RS15305 13359bd911331a1bed45f70393104e3d 365 Pfam PF10023 Putative aminopeptidase 26 348 1.1E-132 T 22-04-2016 IPR014553 Predicted aminopeptidase RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 Gene3D G3DSA:3.40.30.10 3 160 3.1E-72 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 PANTHER PTHR11592 1 161 1.4E-93 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 PIRSF PIRSF000303 1 162 8.2E-68 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 PRINTS PR01011 Glutathione peroxidase family signature 123 132 6.7E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 PRINTS PR01011 Glutathione peroxidase family signature 22 39 6.7E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 PRINTS PR01011 Glutathione peroxidase family signature 57 73 6.7E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 Pfam PF00255 Glutathione peroxidase 4 110 4.6E-44 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS14340 ae1cc791c51df7a5def0f465003f7dcc 165 SUPERFAMILY SSF52833 3 159 7.24E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00150 60a0a3fb7a49f6dc0e027f4283da408e 348 Gene3D G3DSA:1.20.144.10 1 58 3.3E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS00150 60a0a3fb7a49f6dc0e027f4283da408e 348 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 201 230 4.6E-10 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS00150 60a0a3fb7a49f6dc0e027f4283da408e 348 Pfam PF12951 Passenger-associated-transport-repeat 201 229 7.4E-7 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat RPIC_RS00150 60a0a3fb7a49f6dc0e027f4283da408e 348 SUPERFAMILY SSF51126 92 318 1.0E-6 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RPIC_RS00150 60a0a3fb7a49f6dc0e027f4283da408e 348 Gene3D G3DSA:2.160.20.20 168 345 1.9E-7 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like RPIC_RS00150 60a0a3fb7a49f6dc0e027f4283da408e 348 SUPERFAMILY SSF48317 1 54 9.68E-9 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RPIC_RS00800 946b592330dfc3bff64ff2689952ff22 261 SUPERFAMILY SSF110997 140 211 5.23E-10 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS00800 946b592330dfc3bff64ff2689952ff22 261 Gene3D G3DSA:3.30.70.1070 139 212 7.2E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS00800 946b592330dfc3bff64ff2689952ff22 261 Pfam PF05036 Sporulation related domain 179 242 1.0E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 SUPERFAMILY SSF46955 8 130 2.53E-28 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 PANTHER PTHR30204:SF18 1 117 2.2E-26 T 22-04-2016 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.9E-24 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.9E-24 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.9E-24 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 3.6E-54 T 22-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 SMART SM00422 8 77 8.9E-27 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 Pfam PF09278 MerR, DNA binding 51 112 3.9E-18 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 Gene3D G3DSA:1.10.1660.10 63 137 1.1E-26 T 22-04-2016 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 Pfam PF00376 MerR family regulatory protein 9 46 3.1E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 PANTHER PTHR30204 1 117 2.2E-26 T 22-04-2016 RPIC_RS08745 f6f6b7ed1c5dec25de50102860aec406 144 Gene3D G3DSA:1.10.1660.10 7 62 6.7E-23 T 22-04-2016 RPIC_RS02650 bd29b6915cccf415d5b55fe6447e88bb 349 PANTHER PTHR21716:SF13 1 343 1.8E-91 T 22-04-2016 RPIC_RS02650 bd29b6915cccf415d5b55fe6447e88bb 349 PANTHER PTHR21716 1 343 1.8E-91 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RPIC_RS02650 bd29b6915cccf415d5b55fe6447e88bb 349 Pfam PF01594 Domain of unknown function DUF20 10 339 9.2E-56 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 Pfam PF03466 LysR substrate binding domain 88 293 6.4E-40 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 SUPERFAMILY SSF46785 4 112 2.93E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 Gene3D G3DSA:3.40.190.10 90 174 1.5E-8 T 22-04-2016 RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 SUPERFAMILY SSF53850 89 295 1.65E-40 T 22-04-2016 RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 Gene3D G3DSA:1.10.10.10 3 84 2.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 Gene3D G3DSA:3.40.190.10 175 259 1.9E-19 T 22-04-2016 RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 PANTHER PTHR30537 1 294 3.8E-152 T 22-04-2016 RPIC_RS04915 ac7cc5169909390ca5b4b05919412819 298 PANTHER PTHR30537:SF20 1 294 3.8E-152 T 22-04-2016 RPIC_RS09325 dc4cbd121430dfdbefbe2da121d64829 173 Gene3D G3DSA:1.20.1290.10 3 171 2.9E-44 T 22-04-2016 IPR029032 AhpD-like RPIC_RS09325 dc4cbd121430dfdbefbe2da121d64829 173 Pfam PF02627 Carboxymuconolactone decarboxylase family 95 172 2.0E-12 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS09325 dc4cbd121430dfdbefbe2da121d64829 173 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 173 75.171 T 22-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS09325 dc4cbd121430dfdbefbe2da121d64829 173 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 161 1.5E-7 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS09325 dc4cbd121430dfdbefbe2da121d64829 173 SUPERFAMILY SSF69118 3 172 6.94E-40 T 22-04-2016 IPR029032 AhpD-like RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 Gene3D G3DSA:3.20.19.10 1 202 5.4E-48 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 42.007 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 PANTHER PTHR11670:SF27 1 208 4.7E-97 T 22-04-2016 RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 Pfam PF00694 Aconitase C-terminal domain 1 131 6.6E-33 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 SUPERFAMILY SSF52016 1 204 1.47E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 PANTHER PTHR11670 1 208 4.7E-97 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06855 5060dcce2e1979e0ef7eec9e976a1209 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.8E-77 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 81 95 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 PIRSF PIRSF004848 1 238 1.6E-71 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 233 1.7E-70 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 Gene3D G3DSA:3.20.20.10 2 237 1.8E-94 T 22-04-2016 IPR029066 PLP-binding barrel RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 SUPERFAMILY SSF51419 3 231 5.37E-78 T 22-04-2016 IPR029066 PLP-binding barrel RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 Pfam PF01168 Alanine racemase, N-terminal domain 7 233 1.7E-31 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 RPIC_RS14385 89919afc8cf018408a528e3b9de95c63 238 PANTHER PTHR10146 4 238 1.4E-96 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 RPIC_RS12060 3057bfe7b659494f14a9b219dd6a9fd9 369 SUPERFAMILY SSF51445 67 368 2.95E-42 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC_RS12060 3057bfe7b659494f14a9b219dd6a9fd9 369 Pfam PF03537 Glycoside-hydrolase family GH114 70 360 7.6E-35 T 22-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain RPIC_RS03850 f583e8fd2b0dfbd156e3c1ae29d01caf 107 Gene3D G3DSA:1.10.150.280 19 82 1.1E-19 T 22-04-2016 RPIC_RS03850 f583e8fd2b0dfbd156e3c1ae29d01caf 107 Pfam PF12836 Helix-hairpin-helix motif 21 79 8.7E-16 T 22-04-2016 RPIC_RS03850 f583e8fd2b0dfbd156e3c1ae29d01caf 107 PANTHER PTHR21180 7 81 1.4E-14 T 22-04-2016 RPIC_RS03850 f583e8fd2b0dfbd156e3c1ae29d01caf 107 SUPERFAMILY SSF47781 21 87 1.22E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 PANTHER PTHR21000 4 557 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 Pfam PF00920 Dehydratase family 36 554 2.3E-203 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 SUPERFAMILY SSF52016 380 557 1.65E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 PANTHER PTHR21000:SF5 4 557 0.0 T 22-04-2016 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 1.2E-224 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 SUPERFAMILY SSF143975 4 378 1.27E-132 T 22-04-2016 RPIC_RS13180 0d74339b46da2d666cc19f428d21509d 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.561 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 RPIC_RS02500 c195f08dd3685353d0e7fc97652b2be7 470 SMART SM00283 33 277 1.2E-9 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS02500 c195f08dd3685353d0e7fc97652b2be7 470 Gene3D G3DSA:1.10.287.950 48 272 1.2E-34 T 22-04-2016 RPIC_RS02500 c195f08dd3685353d0e7fc97652b2be7 470 PANTHER PTHR32089 15 297 3.8E-35 T 22-04-2016 RPIC_RS02500 c195f08dd3685353d0e7fc97652b2be7 470 PANTHER PTHR32089:SF53 15 297 3.8E-35 T 22-04-2016 RPIC_RS02500 c195f08dd3685353d0e7fc97652b2be7 470 SUPERFAMILY SSF58104 14 295 8.5E-41 T 22-04-2016 RPIC_RS02500 c195f08dd3685353d0e7fc97652b2be7 470 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 87 285 2.9E-21 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 Pfam PF07702 UTRA domain 95 232 2.6E-30 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 SUPERFAMILY SSF64288 64 234 5.02E-39 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 SUPERFAMILY SSF46785 4 78 1.47E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 Gene3D G3DSA:1.10.10.10 5 81 4.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 PANTHER PTHR11751:SF364 6 98 1.3E-32 T 22-04-2016 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 Gene3D G3DSA:3.40.1410.10 92 228 5.2E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.5E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.5E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 PANTHER PTHR11751 6 98 1.3E-32 T 22-04-2016 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 10 237 1.5E-97 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 SMART SM00345 15 74 2.0E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS14200 979c7ac392ca44dc43892e03de86b309 237 SMART SM00866 95 232 4.3E-29 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RPIC_RS18355 094836011d0df60ce4838263ec0f089a 508 SUPERFAMILY SSF56176 19 202 5.14E-30 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS18355 094836011d0df60ce4838263ec0f089a 508 Pfam PF01565 FAD binding domain 33 161 5.1E-13 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS18355 094836011d0df60ce4838263ec0f089a 508 PANTHER PTHR11748 5 506 9.3E-84 T 22-04-2016 RPIC_RS18355 094836011d0df60ce4838263ec0f089a 508 Pfam PF08031 Berberine and berberine like 458 507 4.9E-15 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 RPIC_RS18355 094836011d0df60ce4838263ec0f089a 508 PANTHER PTHR11748:SF33 5 506 9.3E-84 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SUPERFAMILY SSF55785 64 166 2.93E-6 T 22-04-2016 IPR000014 PAS domain RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Gene3D G3DSA:3.30.450.20 50 174 1.9E-11 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 432 1.7E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Pfam PF00072 Response regulator receiver domain 459 570 9.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Pfam PF00072 Response regulator receiver domain 605 712 1.0E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SUPERFAMILY SSF55874 261 433 7.86E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Gene3D G3DSA:3.40.50.2300 455 581 6.2E-30 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Gene3D G3DSA:3.40.50.2300 602 717 5.5E-23 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SUPERFAMILY SSF47384 192 268 7.65E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SUPERFAMILY SSF52172 602 717 2.99E-22 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 3.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 3.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 3.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 3.3E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Gene3D G3DSA:3.30.565.10 270 433 4.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SUPERFAMILY SSF52172 457 581 7.26E-26 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SMART SM00387 312 435 5.9E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Pfam PF08448 PAS fold 65 159 1.1E-5 T 22-04-2016 IPR013656 PAS fold-4 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 Gene3D G3DSA:1.10.287.130 190 233 2.7E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SMART SM00448 457 570 2.9E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 SMART SM00448 603 712 1.4E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PANTHER PTHR24423 201 612 7.9E-163 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PANTHER PTHR24423 121 180 7.9E-163 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PANTHER PTHR24423:SF438 201 612 7.9E-163 T 22-04-2016 RPIC_RS00130 0ac7a11aa00f447510dcd07f8f7662b9 732 PANTHER PTHR24423:SF438 121 180 7.9E-163 T 22-04-2016 RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.7E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 Gene3D G3DSA:3.40.50.720 2 257 1.1E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 Pfam PF00106 short chain dehydrogenase 9 191 1.8E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PANTHER PTHR24322:SF57 13 191 5.9E-41 T 22-04-2016 RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 SUPERFAMILY SSF51735 8 257 3.33E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS06785 fa1d46239963dd0fa00096a005093c3e 260 PANTHER PTHR24322 13 191 5.9E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 SMART SM00271 9 74 8.9E-7 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 SUPERFAMILY SSF46565 10 82 2.09E-18 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 Pfam PF00226 DnaJ domain 11 78 3.7E-7 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 Gene3D G3DSA:1.20.1280.20 89 178 2.4E-27 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 21 176 2.8E-31 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 9 178 23.952 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 Pfam PF07743 HSCB C-terminal oligomerisation domain 95 169 3.8E-18 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 PANTHER PTHR14021 8 167 3.8E-44 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 SUPERFAMILY SSF47144 85 179 5.36E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 RPIC_RS04365 5608a5ae74cb88cb38187d26b14c1877 179 Gene3D G3DSA:1.10.287.110 6 80 2.8E-27 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 PANTHER PTHR21294:SF8 1 249 9.3E-160 T 22-04-2016 RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 SUPERFAMILY SSF52402 1 242 1.74E-86 T 22-04-2016 RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 4.7E-45 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 SMART SM00893 23 211 2.5E-67 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 PIRSF PIRSF000090 1 249 3.0E-86 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 Gene3D G3DSA:3.40.50.620 1 247 1.6E-105 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 PANTHER PTHR21294 1 249 9.3E-160 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 RPIC_RS12995 5b0f1343715561d9f67d9942667657f5 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 RPIC_RS17910 8547e800856cd1f3366ca922eac13152 145 PANTHER PTHR34846:SF2 11 141 2.4E-15 T 22-04-2016 RPIC_RS17910 8547e800856cd1f3366ca922eac13152 145 SUPERFAMILY SSF69118 4 142 5.5E-50 T 22-04-2016 IPR029032 AhpD-like RPIC_RS17910 8547e800856cd1f3366ca922eac13152 145 PANTHER PTHR34846 11 141 2.4E-15 T 22-04-2016 RPIC_RS17910 8547e800856cd1f3366ca922eac13152 145 Gene3D G3DSA:1.20.1290.10 1 141 4.4E-56 T 22-04-2016 IPR029032 AhpD-like RPIC_RS17910 8547e800856cd1f3366ca922eac13152 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 75 6.9E-16 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS17910 8547e800856cd1f3366ca922eac13152 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 94 3.8E-19 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 SUPERFAMILY SSF47648 4 72 1.1E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 338 1.0E-122 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 Pfam PF00591 Glycosyl transferase family, a/b domain 79 329 8.1E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 2.2E-12 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 Gene3D G3DSA:3.40.1030.10 79 342 6.2E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 Gene3D G3DSA:1.20.970.10 6 72 2.0E-25 T 22-04-2016 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 PANTHER PTHR11922 1 342 2.7E-112 T 22-04-2016 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 339 37.156 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 PANTHER PTHR11922:SF5 1 342 2.7E-112 T 22-04-2016 RPIC_RS15435 df9e9e6eeb984725c50c5db804ccf31c 345 SUPERFAMILY SSF52418 79 342 1.11E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 RPIC_RS17890 768f2f1124681594b9c2c385a0e02c1a 159 PANTHER PTHR33221:SF4 2 153 5.5E-57 T 22-04-2016 RPIC_RS17890 768f2f1124681594b9c2c385a0e02c1a 159 PANTHER PTHR33221 2 153 5.5E-57 T 22-04-2016 RPIC_RS17890 768f2f1124681594b9c2c385a0e02c1a 159 Pfam PF02082 Transcriptional regulator 1 81 1.7E-25 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC_RS17890 768f2f1124681594b9c2c385a0e02c1a 159 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.3E-36 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type RPIC_RS17890 768f2f1124681594b9c2c385a0e02c1a 159 Gene3D G3DSA:1.10.10.10 1 135 6.1E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17890 768f2f1124681594b9c2c385a0e02c1a 159 SUPERFAMILY SSF46785 2 134 1.13E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 Gene3D G3DSA:2.160.20.70 147 262 6.6E-39 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 158 258 3.7E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 262 26.377 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 PANTHER PTHR34108 1 264 4.3E-37 T 22-04-2016 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 SUPERFAMILY SSF63848 156 262 4.05E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 6 103 3.9E-8 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 261 1.2E-48 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 RPIC_RS17655 723a695d410831c91a6124b2dda0ba8d 264 PANTHER PTHR34108:SF1 1 264 4.3E-37 T 22-04-2016 RPIC_RS03330 03879c3908132a59d975db2de0a3d6b2 144 PANTHER PTHR30558 1 140 3.2E-32 T 22-04-2016 RPIC_RS03330 03879c3908132a59d975db2de0a3d6b2 144 TIGRFAM TIGR02801 tolR: protein TolR 14 141 4.9E-41 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 RPIC_RS03330 03879c3908132a59d975db2de0a3d6b2 144 PANTHER PTHR30558:SF7 1 140 3.2E-32 T 22-04-2016 RPIC_RS03330 03879c3908132a59d975db2de0a3d6b2 144 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 142 3.1E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 Gene3D G3DSA:1.10.1660.10 56 120 9.8E-12 T 22-04-2016 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.0E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 SUPERFAMILY SSF46955 1 113 3.33E-27 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 Gene3D G3DSA:1.10.1660.10 1 55 2.7E-25 T 22-04-2016 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 PANTHER PTHR30204:SF30 1 108 5.2E-34 T 22-04-2016 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.1E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 SMART SM00422 1 70 2.4E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 PANTHER PTHR30204 1 108 5.2E-34 T 22-04-2016 RPIC_RS09885 edf33a3e750d5fe9384dea4e69fbdddc 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 Gene3D G3DSA:3.30.470.20 2 258 6.2E-103 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 Pfam PF02785 Biotin carboxylase C-terminal domain 133 252 1.7E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 SMART SM00878 133 252 1.4E-55 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 PANTHER PTHR18866 1 305 9.8E-165 T 22-04-2016 RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 83 90 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 2 120 7.7E-47 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 SUPERFAMILY SSF51246 128 258 5.23E-38 T 22-04-2016 IPR011054 Rudiment single hybrid motif RPIC_RS19250 798287f85c1b8aef7637eb4716c21110 308 SUPERFAMILY SSF56059 3 145 3.18E-41 T 22-04-2016 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 PANTHER PTHR22939 29 209 3.1E-34 T 22-04-2016 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 PRINTS PR00834 HtrA/DegQ protease family signature 155 172 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 PRINTS PR00834 HtrA/DegQ protease family signature 123 147 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 PRINTS PR00834 HtrA/DegQ protease family signature 177 194 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 PRINTS PR00834 HtrA/DegQ protease family signature 63 75 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 PRINTS PR00834 HtrA/DegQ protease family signature 83 103 2.1E-19 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 Gene3D G3DSA:2.40.10.10 125 210 2.5E-23 T 22-04-2016 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 Gene3D G3DSA:2.40.10.10 51 124 3.1E-10 T 22-04-2016 RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 SUPERFAMILY SSF50494 1 209 5.69E-37 T 22-04-2016 IPR009003 Peptidase S1, PA clan RPIC_RS16925 4070270e6fa3fc5308f669dcd269a140 306 Pfam PF13365 Trypsin-like peptidase domain 55 184 3.4E-25 T 22-04-2016 RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 35 308 1.1E-44 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 PIRSF PIRSF002816 1 334 1.0E-143 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 SUPERFAMILY SSF53822 33 331 1.69E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 PANTHER PTHR30036:SF1 31 307 3.5E-40 T 22-04-2016 RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 PANTHER PTHR30036 31 307 3.5E-40 T 22-04-2016 RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 Gene3D G3DSA:3.40.50.2300 156 306 2.7E-47 T 22-04-2016 RPIC_RS14760 bbb41809a5a12afe6f479a05a8b5d821 334 Gene3D G3DSA:3.40.50.2300 33 155 8.0E-38 T 22-04-2016 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 Pfam PF01634 ATP phosphoribosyltransferase 60 214 8.7E-49 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 PANTHER PTHR21403:SF3 8 225 7.5E-85 T 22-04-2016 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 11 196 5.3E-59 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 Gene3D G3DSA:3.40.190.10 10 154 8.0E-44 T 22-04-2016 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 PANTHER PTHR21403 8 225 7.5E-85 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 SUPERFAMILY SSF53850 10 217 3.26E-66 T 22-04-2016 RPIC_RS15945 1372eca153d72e70bf52657a58f88486 229 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 10 220 56.111 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 485 2.0E-165 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 149 163 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 Pfam PF02637 GatB domain 334 485 2.0E-52 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 Gene3D G3DSA:1.10.10.410 423 485 7.8E-7 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 SUPERFAMILY SSF89095 302 408 3.79E-30 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 Pfam PF02934 GatB/GatE catalytic domain 5 294 3.1E-111 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 PANTHER PTHR11659 2 488 2.3E-252 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 PANTHER PTHR11659:SF0 2 488 2.3E-252 T 22-04-2016 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 486 38.416 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 SUPERFAMILY SSF55931 4 301 5.95E-118 T 22-04-2016 RPIC_RS18330 fcd86397f4bfb183eacd71a18199d726 488 SMART SM00845 333 485 8.0E-82 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 RPIC_RS03720 e09ef46ae70fd53c53be7649dd534806 818 Gene3D G3DSA:3.60.10.10 458 761 5.6E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS03720 e09ef46ae70fd53c53be7649dd534806 818 Pfam PF00932 Lamin Tail Domain 17 122 2.3E-14 T 22-04-2016 IPR001322 Lamin Tail Domain RPIC_RS03720 e09ef46ae70fd53c53be7649dd534806 818 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 461 754 1.5E-8 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS03720 e09ef46ae70fd53c53be7649dd534806 818 SUPERFAMILY SSF56219 458 761 3.02E-33 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS03720 e09ef46ae70fd53c53be7649dd534806 818 PANTHER PTHR11371 9 764 1.6E-183 T 22-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 RPIC_RS03720 e09ef46ae70fd53c53be7649dd534806 818 PANTHER PTHR11371:SF31 9 764 1.6E-183 T 22-04-2016 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 SUPERFAMILY SSF54849 137 203 4.35E-24 T 22-04-2016 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 Gene3D G3DSA:3.50.7.10 189 368 1.0E-99 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 Gene3D G3DSA:1.10.560.10 4 188 7.4E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 SUPERFAMILY SSF48592 406 521 2.82E-78 T 22-04-2016 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 SUPERFAMILY SSF48592 7 134 2.82E-78 T 22-04-2016 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 PANTHER PTHR11353 2 547 1.1E-251 T 22-04-2016 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 Gene3D G3DSA:1.10.560.10 369 518 2.8E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 3.1E-255 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.696 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 SUPERFAMILY SSF52029 185 376 1.18E-83 T 22-04-2016 IPR027409 GroEL-like apical domain RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 RPIC_RS02815 fcec9fee1c17f7a758a308e3bc90250f 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.0E-100 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RPIC_RS04160 9e272323ab934f51d347bf3d4fd0170f 156 Gene3D G3DSA:3.30.1330.40 5 155 6.0E-61 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC_RS04160 9e272323ab934f51d347bf3d4fd0170f 156 SUPERFAMILY SSF55298 6 155 2.36E-50 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC_RS04160 9e272323ab934f51d347bf3d4fd0170f 156 PANTHER PTHR11803:SF2 8 155 2.2E-41 T 22-04-2016 RPIC_RS04160 9e272323ab934f51d347bf3d4fd0170f 156 PANTHER PTHR11803 8 155 2.2E-41 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family RPIC_RS04160 9e272323ab934f51d347bf3d4fd0170f 156 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 10 155 1.4E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 Gene3D G3DSA:1.10.10.10 10 80 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 PANTHER PTHR11751:SF287 105 425 6.0E-131 T 22-04-2016 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 SUPERFAMILY SSF46785 8 80 9.53E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 PANTHER PTHR11751 105 425 6.0E-131 T 22-04-2016 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 3.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 SMART SM00345 17 76 4.7E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 Gene3D G3DSA:3.40.640.10 159 371 3.6E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 4.2E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 Pfam PF00155 Aminotransferase class I and II 147 414 2.6E-20 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS17905 25a3b582cf926c72885d4dd370db56e5 485 SUPERFAMILY SSF53383 103 482 9.76E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS01340 bc133bd08f00df3a717192988e9d7f28 161 Gene3D G3DSA:3.40.1520.10 14 102 1.3E-49 T 22-04-2016 IPR007153 Adenosine specific kinase RPIC_RS01340 bc133bd08f00df3a717192988e9d7f28 161 Gene3D G3DSA:2.10.70.30 103 143 3.1E-31 T 22-04-2016 RPIC_RS01340 bc133bd08f00df3a717192988e9d7f28 161 PANTHER PTHR36155:SF1 1 161 1.1E-102 T 22-04-2016 RPIC_RS01340 bc133bd08f00df3a717192988e9d7f28 161 Pfam PF04008 Adenosine specific kinase 6 160 4.1E-73 T 22-04-2016 IPR007153 Adenosine specific kinase RPIC_RS01340 bc133bd08f00df3a717192988e9d7f28 161 PANTHER PTHR36155 1 161 1.1E-102 T 22-04-2016 RPIC_RS01340 bc133bd08f00df3a717192988e9d7f28 161 SUPERFAMILY SSF103165 1 161 9.55E-74 T 22-04-2016 IPR007153 Adenosine specific kinase RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 Pfam PF13411 MerR HTH family regulatory protein 4 70 1.5E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 1.3E-50 T 22-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 Gene3D G3DSA:1.10.1660.10 57 134 6.2E-23 T 22-04-2016 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.49E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.49E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.49E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 PANTHER PTHR30204:SF18 1 114 2.6E-39 T 22-04-2016 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 PANTHER PTHR30204 1 114 2.6E-39 T 22-04-2016 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 SUPERFAMILY SSF46955 4 121 1.36E-33 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 Gene3D G3DSA:1.10.1660.10 3 56 3.9E-25 T 22-04-2016 RPIC_RS08905 033a6efda00209bf0fa74650cb55480a 144 SMART SM00422 3 72 7.4E-27 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS00310 2f3e638c01217b50af88bd2f71a1747c 306 Pfam PF01734 Patatin-like phospholipase 10 182 3.2E-26 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC_RS00310 2f3e638c01217b50af88bd2f71a1747c 306 Gene3D G3DSA:3.40.1090.10 13 183 1.7E-17 T 22-04-2016 RPIC_RS00310 2f3e638c01217b50af88bd2f71a1747c 306 PANTHER PTHR14226 6 191 4.8E-41 T 22-04-2016 RPIC_RS00310 2f3e638c01217b50af88bd2f71a1747c 306 SUPERFAMILY SSF52151 6 213 1.08E-51 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS03080 78ae0d54102686aa1b15034906859bf0 313 Pfam PF00535 Glycosyl transferase family 2 13 143 1.0E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS03080 78ae0d54102686aa1b15034906859bf0 313 SUPERFAMILY SSF53448 10 238 7.22E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS03080 78ae0d54102686aa1b15034906859bf0 313 PANTHER PTHR22916 6 248 4.6E-45 T 22-04-2016 RPIC_RS03080 78ae0d54102686aa1b15034906859bf0 313 Gene3D G3DSA:3.90.550.10 10 251 7.8E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 Gene3D G3DSA:3.40.50.10420 187 293 1.5E-43 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 Gene3D G3DSA:3.40.50.10420 62 125 1.5E-43 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 PANTHER PTHR32479 55 467 4.5E-152 T 22-04-2016 RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 Pfam PF11870 Domain of unknown function (DUF3390) 392 466 1.7E-14 T 22-04-2016 IPR024569 4Fe-4S binding protein, C-terminal RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 PANTHER PTHR32479:SF10 55 467 4.5E-152 T 22-04-2016 RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 Pfam PF13183 4Fe-4S dicluster domain 307 374 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 SUPERFAMILY SSF54862 308 402 2.13E-14 T 22-04-2016 RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 SUPERFAMILY SSF100950 132 293 2.39E-34 T 22-04-2016 RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 SUPERFAMILY SSF100950 61 86 2.39E-34 T 22-04-2016 RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 Gene3D G3DSA:1.10.1060.10 305 396 8.1E-12 T 22-04-2016 RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 68 292 2.7E-50 T 22-04-2016 IPR003741 LUD domain RPIC_RS09500 ee9a6727b02a30ba4e54a5a010dbd3ed 469 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 451 2.0E-136 T 22-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 266 1.1E-109 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 12 271 2.0E-100 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 271 42.663 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 Gene3D G3DSA:3.20.20.60 10 271 6.3E-114 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 SUPERFAMILY SSF51621 12 271 4.32E-106 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 PANTHER PTHR20881 6 272 1.1E-143 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS14115 2912e6637a86b08235fe7e5bfcced9ac 272 PIRSF PIRSF000388 3 272 1.0E-100 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 Gene3D G3DSA:3.30.110.10 62 154 3.7E-43 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 58 1.8E-23 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 Gene3D G3DSA:3.10.20.80 1 60 1.5E-25 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 66 151 4.3E-40 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 SUPERFAMILY SSF55200 65 154 1.44E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 SUPERFAMILY SSF54364 2 60 2.88E-22 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 153 2.3E-64 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 153 25.933 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 ProSitePatterns PS00938 Initiation factor 3 signature. 41 54 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RPIC_RS09715 1a484e466a5846bdee740c0b4e655508 154 PANTHER PTHR10938 1 154 2.3E-62 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 RPIC_RS12635 4599ecd80442c5464befdce735a8d797 478 Pfam PF00171 Aldehyde dehydrogenase family 18 473 1.3E-157 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS12635 4599ecd80442c5464befdce735a8d797 478 Gene3D G3DSA:3.40.309.10 261 449 7.8E-58 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 RPIC_RS12635 4599ecd80442c5464befdce735a8d797 478 SUPERFAMILY SSF53720 2 476 7.46E-154 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS12635 4599ecd80442c5464befdce735a8d797 478 Gene3D G3DSA:3.40.605.10 2 260 1.8E-91 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RPIC_RS12635 4599ecd80442c5464befdce735a8d797 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RPIC_RS12635 4599ecd80442c5464befdce735a8d797 478 PANTHER PTHR11699 1 477 8.4E-198 T 22-04-2016 RPIC_RS18075 6878cd4302c106148b1a1d018a38dc62 384 PANTHER PTHR20857:SF15 163 374 1.5E-40 T 22-04-2016 RPIC_RS18075 6878cd4302c106148b1a1d018a38dc62 384 SUPERFAMILY SSF51391 164 375 7.72E-49 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RPIC_RS18075 6878cd4302c106148b1a1d018a38dc62 384 PANTHER PTHR20857 163 374 1.5E-40 T 22-04-2016 RPIC_RS18075 6878cd4302c106148b1a1d018a38dc62 384 Gene3D G3DSA:3.20.20.70 164 380 3.3E-53 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS18075 6878cd4302c106148b1a1d018a38dc62 384 Pfam PF02581 Thiamine monophosphate synthase/TENI 182 361 3.5E-46 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 PANTHER PTHR19136:SF52 15 273 2.5E-127 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 Gene3D G3DSA:1.10.166.10 2 70 6.2E-32 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 SUPERFAMILY SSF51161 3 258 2.63E-74 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.1E-13 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 56.993 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 274 1.3E-145 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 Gene3D G3DSA:2.160.10.10 91 257 1.4E-61 T 22-04-2016 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 PANTHER PTHR19136 15 273 2.5E-127 T 22-04-2016 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 70 3.6E-27 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 RPIC_RS06290 74572a263e3a5d3becaf9461ec5041fa 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 168 0.0019 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS09930 35060e8125637c3f806bc0ce5b477b3e 277 Gene3D G3DSA:3.40.630.30 43 247 5.7E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS09930 35060e8125637c3f806bc0ce5b477b3e 277 Pfam PF13444 Acetyltransferase (GNAT) domain 59 160 1.5E-36 T 22-04-2016 RPIC_RS09930 35060e8125637c3f806bc0ce5b477b3e 277 PANTHER PTHR37323:SF1 40 275 2.6E-72 T 22-04-2016 RPIC_RS09930 35060e8125637c3f806bc0ce5b477b3e 277 PANTHER PTHR37323 40 275 2.6E-72 T 22-04-2016 RPIC_RS09930 35060e8125637c3f806bc0ce5b477b3e 277 SUPERFAMILY SSF55729 41 250 2.25E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 220 292 1.5E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 81 156 4.6E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 PANTHER PTHR40942 178 297 4.2E-25 T 22-04-2016 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 SUPERFAMILY SSF46626 220 293 4.18E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 SUPERFAMILY SSF46626 80 158 5.16E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 PANTHER PTHR40942:SF1 178 297 4.2E-25 T 22-04-2016 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 PRINTS PR00607 Class IE cytochrome C signature 229 240 6.0E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 PRINTS PR00607 Class IE cytochrome C signature 240 250 6.0E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 PRINTS PR00607 Class IE cytochrome C signature 268 280 6.0E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 PRINTS PR00607 Class IE cytochrome C signature 282 293 6.0E-15 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 Gene3D G3DSA:1.10.760.10 221 293 3.6E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16675 03c6b903faa389835a3401eda2349e6d 297 Gene3D G3DSA:1.10.760.10 81 158 7.2E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS18285 31d62500658f607ee5c501b3344357d6 383 PANTHER PTHR30474:SF1 1 382 2.2E-139 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RPIC_RS18285 31d62500658f607ee5c501b3344357d6 383 PANTHER PTHR30474 1 382 2.2E-139 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC_RS18285 31d62500658f607ee5c501b3344357d6 383 Pfam PF01098 Cell cycle protein 25 379 4.6E-97 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC_RS18285 31d62500658f607ee5c501b3344357d6 383 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 22 378 1.1E-125 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 RPIC_RS18285 31d62500658f607ee5c501b3344357d6 383 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 336 360 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 RPIC_RS05235 9a17ed2935ebe3c52c9fdb5b249c07af 233 PANTHER PTHR23291 22 233 4.4E-39 T 22-04-2016 IPR006214 Bax inhibitor 1-related RPIC_RS05235 9a17ed2935ebe3c52c9fdb5b249c07af 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 225 5.5E-44 T 22-04-2016 RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 PANTHER PTHR30244:SF13 4 367 1.3E-128 T 22-04-2016 RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 PIRSF PIRSF000390 1 367 2.3E-114 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 Gene3D G3DSA:3.40.640.10 16 242 1.3E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 SUPERFAMILY SSF53383 16 365 9.82E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 Gene3D G3DSA:3.90.1150.10 245 366 1.0E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 PANTHER PTHR30244 4 367 1.3E-128 T 22-04-2016 RPIC_RS03090 e144e3d5c245d3a068d4c8007e0ddb4c 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 361 1.3E-130 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 Gene3D G3DSA:3.40.190.10 93 177 3.4E-19 T 22-04-2016 RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 SUPERFAMILY SSF46785 4 86 9.44E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 Pfam PF03466 LysR substrate binding domain 88 293 8.7E-43 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 Gene3D G3DSA:3.40.190.10 178 262 1.6E-23 T 22-04-2016 RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 PANTHER PTHR30537:SF5 1 310 1.1E-108 T 22-04-2016 RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 PANTHER PTHR30537 1 310 1.1E-108 T 22-04-2016 RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 Gene3D G3DSA:1.10.10.10 3 81 7.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18275 b3493d558a715638ef82bb36256621d2 312 SUPERFAMILY SSF53850 90 294 7.14E-44 T 22-04-2016 RPIC_RS04825 bed30d75b8a4119a08821293a642bd4f 294 PANTHER PTHR21496:SF10 4 291 3.8E-83 T 22-04-2016 RPIC_RS04825 bed30d75b8a4119a08821293a642bd4f 294 PIRSF PIRSF012318 22 294 1.2E-105 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 RPIC_RS04825 bed30d75b8a4119a08821293a642bd4f 294 Pfam PF04305 Protein of unknown function (DUF455) 40 287 3.3E-96 T 22-04-2016 IPR007402 Protein of unknown function DUF455 RPIC_RS04825 bed30d75b8a4119a08821293a642bd4f 294 PANTHER PTHR21496 4 291 3.8E-83 T 22-04-2016 RPIC_RS04825 bed30d75b8a4119a08821293a642bd4f 294 SUPERFAMILY SSF47240 95 269 6.0E-20 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS17060 1428e54a921460a1d88ab17389d3ddb6 339 SUPERFAMILY SSF53474 67 338 1.59E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17060 1428e54a921460a1d88ab17389d3ddb6 339 Pfam PF07859 alpha/beta hydrolase fold 105 311 3.4E-70 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC_RS17060 1428e54a921460a1d88ab17389d3ddb6 339 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 104 120 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 RPIC_RS17060 1428e54a921460a1d88ab17389d3ddb6 339 Gene3D G3DSA:3.40.50.1820 27 338 1.1E-90 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17060 1428e54a921460a1d88ab17389d3ddb6 339 PANTHER PTHR23024:SF128 87 335 2.0E-91 T 22-04-2016 RPIC_RS17060 1428e54a921460a1d88ab17389d3ddb6 339 PANTHER PTHR23024 87 335 2.0E-91 T 22-04-2016 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 Gene3D G3DSA:2.40.50.140 22 159 3.8E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 22 512 4.9E-199 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 SUPERFAMILY SSF55681 167 511 2.49E-117 T 22-04-2016 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 Gene3D G3DSA:3.30.930.10 165 509 1.2E-114 T 22-04-2016 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PANTHER PTHR22594 4 514 4.7E-262 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 Pfam PF01336 OB-fold nucleic acid binding domain 74 151 8.6E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PANTHER PTHR22594:SF4 4 514 4.7E-262 T 22-04-2016 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 SUPERFAMILY SSF50249 19 159 4.16E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 27 513 43.788 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 Pfam PF00152 tRNA synthetases class II (D, K and N) 168 510 1.4E-83 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 214 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 220 236 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 267 284 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 262 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS04390 54b799af0c9dfe6e02f6afe8dbe3759d 514 PRINTS PR00982 Lysyl-tRNA synthetase signature 395 411 6.4E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 RPIC_RS01665 c89c2c2525966cb7d797d1147b847950 245 PANTHER PTHR31876:SF1 12 226 4.4E-58 T 22-04-2016 RPIC_RS01665 c89c2c2525966cb7d797d1147b847950 245 Pfam PF04367 Protein of unknown function (DUF502) 63 168 5.4E-37 T 22-04-2016 IPR007462 Protein of unknown function DUF502 RPIC_RS01665 c89c2c2525966cb7d797d1147b847950 245 PANTHER PTHR31876 12 226 4.4E-58 T 22-04-2016 RPIC_RS03415 cd85d0d74699dff89410a9af2671c60a 269 PANTHER PTHR30028:SF0 8 265 7.8E-81 T 22-04-2016 IPR005226 UPF0014 family RPIC_RS03415 cd85d0d74699dff89410a9af2671c60a 269 PANTHER PTHR30028 8 265 7.8E-81 T 22-04-2016 RPIC_RS03415 cd85d0d74699dff89410a9af2671c60a 269 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 251 1.2E-84 T 22-04-2016 IPR005226 UPF0014 family RPIC_RS03415 cd85d0d74699dff89410a9af2671c60a 269 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 14 257 4.8E-61 T 22-04-2016 IPR005226 UPF0014 family RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 SUPERFAMILY SSF53613 16 312 8.26E-82 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 260 273 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PANTHER PTHR10584:SF184 1 312 1.3E-94 T 22-04-2016 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PANTHER PTHR10584 1 312 1.3E-94 T 22-04-2016 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 Gene3D G3DSA:3.40.1190.20 15 312 2.4E-92 T 22-04-2016 IPR029056 Ribokinase-like RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PRINTS PR00990 Ribokinase signature 231 242 3.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PRINTS PR00990 Ribokinase signature 19 40 3.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PRINTS PR00990 Ribokinase signature 46 65 3.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PRINTS PR00990 Ribokinase signature 187 202 3.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 PRINTS PR00990 Ribokinase signature 118 131 3.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 Pfam PF00294 pfkB family carbohydrate kinase 16 307 1.8E-71 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB RPIC_RS04315 9a0ec130f51738e8a7756189f0942958 321 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 17 312 4.9E-112 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 RPIC_RS23730 7b51b8dd7287cac3a19e6b294fc242ff 152 ProSitePatterns PS01054 Transaldolase signature 1. 12 20 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS23730 7b51b8dd7287cac3a19e6b294fc242ff 152 Pfam PF00923 Transaldolase 1 152 1.3E-54 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS23730 7b51b8dd7287cac3a19e6b294fc242ff 152 Gene3D G3DSA:3.20.20.70 1 152 3.9E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS23730 7b51b8dd7287cac3a19e6b294fc242ff 152 PANTHER PTHR10683 1 152 1.3E-84 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 RPIC_RS23730 7b51b8dd7287cac3a19e6b294fc242ff 152 PANTHER PTHR10683:SF18 1 152 1.3E-84 T 22-04-2016 RPIC_RS23730 7b51b8dd7287cac3a19e6b294fc242ff 152 SUPERFAMILY SSF51569 1 152 1.78E-57 T 22-04-2016 RPIC_RS18365 51ccaa4609aff93125a4821cd7bbb1b7 175 Pfam PF01475 Ferric uptake regulator family 30 122 9.9E-10 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RPIC_RS18365 51ccaa4609aff93125a4821cd7bbb1b7 175 SUPERFAMILY SSF46785 21 158 2.93E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18365 51ccaa4609aff93125a4821cd7bbb1b7 175 Gene3D G3DSA:1.10.10.10 21 98 6.3E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18365 51ccaa4609aff93125a4821cd7bbb1b7 175 PANTHER PTHR33202 19 160 5.6E-14 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Gene3D G3DSA:3.40.50.300 2 192 2.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 2.5E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Gene3D G3DSA:3.30.70.870 292 370 5.9E-26 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 SMART SM00838 400 487 7.5E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 SUPERFAMILY SSF54980 293 371 5.76E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PANTHER PTHR23115:SF175 399 597 1.2E-278 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PANTHER PTHR23115:SF175 2 374 1.2E-278 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 SUPERFAMILY SSF52540 2 230 1.26E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 3.3E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Gene3D G3DSA:3.30.70.240 403 491 2.7E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 SUPERFAMILY SSF54980 401 495 2.01E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PANTHER PTHR23115 399 597 1.2E-278 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 PANTHER PTHR23115 2 374 1.2E-278 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Pfam PF00679 Elongation factor G C-terminus 401 486 1.3E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.3E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 5.8E-52 T 22-04-2016 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 304.954 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 TIGRFAM TIGR01393 lepA: elongation factor 4 3 597 2.5E-296 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 RPIC_RS04550 2b92f705172f778217c0d80043246fef 599 Gene3D G3DSA:2.40.30.10 193 290 5.9E-24 T 22-04-2016 RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 SUPERFAMILY SSF51735 12 254 5.03E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PANTHER PTHR24317:SF5 1 289 4.5E-121 T 22-04-2016 RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 155 0.0063 T 22-04-2016 RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PANTHER PTHR24317 1 289 4.5E-121 T 22-04-2016 RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 Gene3D G3DSA:3.40.50.720 3 254 2.2E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 253 4.0E-54 T 22-04-2016 RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 2.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.3E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS00500 c340ba963873c57f1e38591e0047376b 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 8.5E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 Pfam PF10502 Signal peptidase, peptidase S26 245 284 2.0E-6 T 22-04-2016 IPR019533 Peptidase S26 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 78 286 7.5E-53 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PANTHER PTHR12383:SF27 232 295 9.2E-86 T 22-04-2016 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PANTHER PTHR12383:SF27 1 203 9.2E-86 T 22-04-2016 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 ProSitePatterns PS00761 Signal peptidases I signature 3. 252 265 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PANTHER PTHR12383 232 295 9.2E-86 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PANTHER PTHR12383 1 203 9.2E-86 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 Gene3D G3DSA:2.10.109.10 247 292 1.6E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 Gene3D G3DSA:2.10.109.10 89 166 1.6E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 SUPERFAMILY SSF51306 91 293 1.05E-71 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 ProSitePatterns PS00760 Signal peptidases I lysine active site. 159 171 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 ProSitePatterns PS00501 Signal peptidases I serine active site. 102 109 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 Pfam PF00717 Peptidase S24-like 99 181 5.2E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 Gene3D G3DSA:2.170.230.10 167 224 7.4E-6 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 109 8.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 157 169 8.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS04555 736b0c11af226e49569f43d79ab5bbb8 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 247 266 8.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS00485 c4463cafbc5d80a4344965ee65eccd6b 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 258 4.7E-51 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS00485 c4463cafbc5d80a4344965ee65eccd6b 259 PANTHER PTHR11941:SF28 7 256 1.1E-76 T 22-04-2016 RPIC_RS00485 c4463cafbc5d80a4344965ee65eccd6b 259 Gene3D G3DSA:3.90.226.10 6 199 1.8E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00485 c4463cafbc5d80a4344965ee65eccd6b 259 Gene3D G3DSA:1.10.12.10 201 259 6.5E-14 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC_RS00485 c4463cafbc5d80a4344965ee65eccd6b 259 SUPERFAMILY SSF52096 5 259 1.27E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00485 c4463cafbc5d80a4344965ee65eccd6b 259 PANTHER PTHR11941 7 256 1.1E-76 T 22-04-2016 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 60 3.0E-12 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 Gene3D G3DSA:1.10.287.1040 19 85 1.1E-26 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 21 81 15.042 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 Pfam PF02609 Exonuclease VII small subunit 22 72 4.6E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 SUPERFAMILY SSF116842 17 82 2.62E-20 T 22-04-2016 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 PANTHER PTHR34137 9 94 4.9E-23 T 22-04-2016 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 21 75 5.7E-23 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS11970 a0c14ea56a96284c150058b3013bbb89 94 PIRSF PIRSF006488 9 93 2.5E-27 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS12180 705298f212ad6b765a868138082f07e1 328 SUPERFAMILY SSF48452 207 307 1.29E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS12180 705298f212ad6b765a868138082f07e1 328 Gene3D G3DSA:1.25.40.10 235 311 2.0E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS16755 cd7194916e03f3aca93b80a097b0590c 163 Pfam PF14499 Domain of unknown function (DUF4437) 60 138 8.1E-6 T 22-04-2016 IPR028013 Protein of unknown function DUF4437 RPIC_RS16755 cd7194916e03f3aca93b80a097b0590c 163 Gene3D G3DSA:2.60.120.10 36 159 2.2E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS16755 cd7194916e03f3aca93b80a097b0590c 163 SUPERFAMILY SSF51182 32 159 5.71E-22 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 Gene3D G3DSA:1.10.10.10 1 81 1.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 Gene3D G3DSA:3.40.190.10 82 181 7.8E-6 T 22-04-2016 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 SUPERFAMILY SSF46785 1 86 7.41E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 PANTHER PTHR30126:SF2 1 283 6.4E-83 T 22-04-2016 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 Pfam PF03466 LysR substrate binding domain 91 267 3.3E-20 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 PANTHER PTHR30126 1 283 6.4E-83 T 22-04-2016 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 SUPERFAMILY SSF53850 90 267 1.18E-20 T 22-04-2016 RPIC_RS01740 0d6c34e8ce5e5acb84b9db59b5cfac04 314 Gene3D G3DSA:3.40.190.10 225 264 9.1E-7 T 22-04-2016 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 Pfam PF02779 Transketolase, pyrimidine binding domain 599 796 2.9E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 SUPERFAMILY SSF52518 583 804 1.18E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 802 944 5.6E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 Gene3D G3DSA:3.40.50.970 167 523 1.9E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 Gene3D G3DSA:3.40.50.970 602 805 6.6E-23 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 13 943 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 SUPERFAMILY SSF52518 125 552 3.01E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 PANTHER PTHR23152:SF4 3 953 0.0 T 22-04-2016 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 4.9E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 PIRSF PIRSF000157 1 946 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 SMART SM00861 600 797 1.5E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 Pfam PF00676 Dehydrogenase E1 component 217 522 1.8E-47 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 RPIC_RS05455 360bc59377d1ab9d993cf1f0b9f169cf 954 PANTHER PTHR23152 3 953 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PANTHER PTHR24322 13 177 1.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 Gene3D G3DSA:3.40.50.720 5 234 7.2E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.4E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 234 9.9E-31 T 22-04-2016 RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 SUPERFAMILY SSF51735 5 235 1.7E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS10680 e2c961e485abf400d25ce8f38a295fd4 237 PANTHER PTHR24322:SF551 13 177 1.2E-17 T 22-04-2016 RPIC_RS08685 f11536d28b77ff8a7130dfc14aa396c6 312 Pfam PF11740 Plasmid replication region DNA-binding N-term 7 133 2.1E-22 T 22-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 9.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 9.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 9.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 9.7E-19 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 162 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PIRSF PIRSF001365 1 293 2.3E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 278 1.3E-66 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 SUPERFAMILY SSF51569 1 282 7.01E-81 T 22-04-2016 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 SMART SM01130 1 283 4.9E-94 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 Gene3D G3DSA:3.20.20.70 1 283 2.2E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 281 44.498 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PANTHER PTHR12128 1 288 2.6E-78 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 PANTHER PTHR12128:SF34 1 288 2.6E-78 T 22-04-2016 RPIC_RS13640 340c08c464b73ae2cf46cffedcbbc439 296 Pfam PF00701 Dihydrodipicolinate synthetase family 2 280 7.6E-62 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS07905 0622eb270ed78eb5c68d21583f7b342a 263 Pfam PF00899 ThiF family 14 150 2.7E-14 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS07905 0622eb270ed78eb5c68d21583f7b342a 263 SUPERFAMILY SSF69572 13 176 1.44E-17 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RPIC_RS07905 0622eb270ed78eb5c68d21583f7b342a 263 Gene3D G3DSA:3.40.50.720 14 210 9.0E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07905 0622eb270ed78eb5c68d21583f7b342a 263 TIGRFAM TIGR03736 PRTRC_ThiF: PRTRC system ThiF family protein 3 240 1.4E-104 T 22-04-2016 IPR022500 ParB-related, ThiF-related cassette, ThiF RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 Pfam PF01835 MG2 domain 345 441 8.1E-15 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 SUPERFAMILY SSF48239 1080 1175 4.71E-14 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 671 816 1.3E-10 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 PANTHER PTHR11412 340 625 6.3E-31 T 22-04-2016 RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 PANTHER PTHR11412 885 945 6.3E-31 T 22-04-2016 RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 Pfam PF00207 Alpha-2-macroglobulin family 883 975 1.7E-20 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 Gene3D G3DSA:1.50.10.20 1080 1172 1.2E-9 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 SMART SM01359 670 816 4.1E-29 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1080 1105 9.4E-6 T 22-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming RPIC_RS16345 dd89489619beff3e65656f6b76b49cdc 1594 SMART SM01360 883 977 7.8E-17 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 Pfam PF03060 Nitronate monooxygenase 15 374 6.6E-34 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 PANTHER PTHR32332 72 354 1.6E-74 T 22-04-2016 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 PANTHER PTHR32332 14 49 1.6E-74 T 22-04-2016 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 SUPERFAMILY SSF51412 14 357 2.59E-31 T 22-04-2016 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 Gene3D G3DSA:3.20.20.70 12 329 9.5E-34 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 PANTHER PTHR32332:SF18 72 354 1.6E-74 T 22-04-2016 RPIC_RS18050 6a1b58a17208cb3e4cb9e73fc381d75e 386 PANTHER PTHR32332:SF18 14 49 1.6E-74 T 22-04-2016 RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 Pfam PF00543 Nitrogen regulatory protein P-II 6 95 1.0E-10 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 SMART SM00938 6 97 1.4E-6 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 PRINTS PR00340 P-II protein signature 25 43 1.3E-5 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 PRINTS PR00340 P-II protein signature 78 98 1.3E-5 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 PRINTS PR00340 P-II protein signature 4 19 1.3E-5 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 Gene3D G3DSA:3.30.70.120 4 96 2.6E-15 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIC_RS08795 87ae4c9612ff6958e4da0b777bd6161a 109 SUPERFAMILY SSF54913 4 98 3.15E-18 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Pfam PF09334 tRNA synthetases class I (M) 6 399 1.5E-147 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Hamap MF_00098 Methionine--tRNA ligase [metG]. 4 550 40.244 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Pfam PF01588 Putative tRNA binding domain 590 686 9.9E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 SUPERFAMILY SSF47323 389 598 1.33E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Gene3D G3DSA:2.40.50.140 577 689 3.2E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Gene3D G3DSA:1.10.730.10 383 539 4.7E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PANTHER PTHR11946 3 641 3.7E-215 T 22-04-2016 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 387 398 7.3E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 7.3E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 265 7.3E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 308 7.3E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 7.3E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 7.3E-24 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Gene3D G3DSA:2.20.28.20 143 174 2.5E-18 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 4.3E-168 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 PANTHER PTHR11946:SF86 3 641 3.7E-215 T 22-04-2016 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 SUPERFAMILY SSF50249 583 689 1.81E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Pfam PF08264 Anticodon-binding domain of tRNA 423 506 2.8E-6 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 SUPERFAMILY SSF52374 3 139 4.46E-99 T 22-04-2016 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 SUPERFAMILY SSF52374 174 390 4.46E-99 T 22-04-2016 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 SUPERFAMILY SSF57770 140 174 3.79E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 558 690 5.8E-41 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Gene3D G3DSA:3.40.50.620 4 142 1.0E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS12775 002c46f9cd696b2e10a1a0f05d13bf06 690 Gene3D G3DSA:3.40.50.620 181 382 1.0E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 433 102.187 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 Pfam PF00202 Aminotransferase class-III 35 404 1.9E-75 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 PANTHER PTHR11986:SF5 5 433 3.3E-211 T 22-04-2016 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 7 432 1.9E-184 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 Gene3D G3DSA:3.40.640.10 73 323 1.0E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 Gene3D G3DSA:3.90.1150.10 5 72 1.2E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 Gene3D G3DSA:3.90.1150.10 327 432 1.2E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 PANTHER PTHR11986 5 433 3.3E-211 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS02970 fc828d8fba79f48beb4af8ba3cd2d8d6 433 SUPERFAMILY SSF53383 5 432 3.38E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS10460 511264b40aaaf66e22dbe4d28d2a6909 66 Pfam PF05433 Glycine zipper 2TM domain 29 64 1.6E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 SMART SM00283 266 513 4.6E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 Gene3D G3DSA:1.10.287.950 280 485 5.3E-65 T 22-04-2016 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 SMART SM01049 33 127 8.5E-34 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 319 512 2.1E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 PANTHER PTHR32089 190 515 2.5E-139 T 22-04-2016 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 PANTHER PTHR32089:SF63 190 515 2.5E-139 T 22-04-2016 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 Pfam PF17200 Single Cache domain 2 37 185 1.7E-34 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 Gene3D G3DSA:3.30.450.20 22 180 1.3E-42 T 22-04-2016 RPIC_RS14985 ce8bb4fe3d0fca602d1229e94738ef6b 515 SUPERFAMILY SSF58104 242 514 1.31E-70 T 22-04-2016 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.7E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 Gene3D G3DSA:1.10.260.40 4 61 7.6E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 Gene3D G3DSA:3.40.50.2300 62 174 5.7E-36 T 22-04-2016 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 SMART SM00354 2 72 4.4E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 SUPERFAMILY SSF47413 4 60 1.59E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 Gene3D G3DSA:3.40.50.2300 175 332 1.5E-47 T 22-04-2016 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 PANTHER PTHR30146 4 337 1.7E-92 T 22-04-2016 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 PANTHER PTHR30146:SF30 4 337 1.7E-92 T 22-04-2016 RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 326 6.6E-32 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain RPIC_RS07025 58bb7229c471531f20e5bca9e3747f0a 356 SUPERFAMILY SSF53822 59 326 9.26E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS13585 410ff28b9c032048b22a9c9fe02c1bf6 321 SUPERFAMILY SSF56281 44 320 1.97E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS13585 410ff28b9c032048b22a9c9fe02c1bf6 321 PANTHER PTHR12553 255 321 2.2E-40 T 22-04-2016 RPIC_RS13585 410ff28b9c032048b22a9c9fe02c1bf6 321 PANTHER PTHR12553 44 237 2.2E-40 T 22-04-2016 RPIC_RS13585 410ff28b9c032048b22a9c9fe02c1bf6 321 Pfam PF12706 Beta-lactamase superfamily domain 75 287 5.2E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS13585 410ff28b9c032048b22a9c9fe02c1bf6 321 Gene3D G3DSA:3.60.15.10 44 321 7.3E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS17310 91a2ad4eb0ccca66c9f219b9c1f507f0 377 SUPERFAMILY SSF55931 4 368 3.99E-117 T 22-04-2016 RPIC_RS17310 91a2ad4eb0ccca66c9f219b9c1f507f0 377 PANTHER PTHR36510:SF1 1 370 4.5E-127 T 22-04-2016 RPIC_RS17310 91a2ad4eb0ccca66c9f219b9c1f507f0 377 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 297 2.4E-113 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIC_RS17310 91a2ad4eb0ccca66c9f219b9c1f507f0 377 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 6.3E-61 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIC_RS17310 91a2ad4eb0ccca66c9f219b9c1f507f0 377 PANTHER PTHR36510 1 370 4.5E-127 T 22-04-2016 RPIC_RS17310 91a2ad4eb0ccca66c9f219b9c1f507f0 377 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 377 103.882 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 RPIC_RS01720 9cd3220719f756b5b28c3514f1867a0f 321 PANTHER PTHR33434 10 317 6.4E-25 T 22-04-2016 RPIC_RS01720 9cd3220719f756b5b28c3514f1867a0f 321 PANTHER PTHR33434:SF2 10 317 6.4E-25 T 22-04-2016 RPIC_RS01720 9cd3220719f756b5b28c3514f1867a0f 321 Gene3D G3DSA:3.40.50.10170 9 172 1.2E-21 T 22-04-2016 RPIC_RS01720 9cd3220719f756b5b28c3514f1867a0f 321 Pfam PF02645 Uncharacterised protein, DegV family COG1307 10 315 2.9E-38 T 22-04-2016 IPR003797 DegV RPIC_RS01720 9cd3220719f756b5b28c3514f1867a0f 321 SUPERFAMILY SSF82549 8 314 4.45E-44 T 22-04-2016 RPIC_RS01720 9cd3220719f756b5b28c3514f1867a0f 321 Gene3D G3DSA:3.30.1180.10 176 315 1.3E-15 T 22-04-2016 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.9E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 PANTHER PTHR33280 1 78 5.6E-32 T 22-04-2016 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 SUPERFAMILY SSF143800 1 78 2.0E-23 T 22-04-2016 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.288 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.9E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS05090 fea4f15f52a6b84f1267a25495d3b6ce 86 Pfam PF01197 Ribosomal protein L31 1 78 2.6E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13150 8f441f112a63ef6b1e8ba41871c1c6b4 156 Gene3D G3DSA:3.10.590.10 4 151 2.2E-28 T 22-04-2016 IPR002740 EVE domain RPIC_RS13150 8f441f112a63ef6b1e8ba41871c1c6b4 156 SUPERFAMILY SSF88697 3 149 3.91E-58 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS13150 8f441f112a63ef6b1e8ba41871c1c6b4 156 PANTHER PTHR14087 4 147 3.1E-70 T 22-04-2016 RPIC_RS13150 8f441f112a63ef6b1e8ba41871c1c6b4 156 Pfam PF01878 EVE domain 4 148 2.4E-52 T 22-04-2016 IPR002740 EVE domain RPIC_RS00670 d77370085b0ab6f8f0b049f3d37d76b3 185 SUPERFAMILY SSF47240 40 184 4.54E-39 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS00670 d77370085b0ab6f8f0b049f3d37d76b3 185 PIRSF PIRSF018063 21 185 1.5E-57 T 22-04-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold RPIC_RS00670 d77370085b0ab6f8f0b049f3d37d76b3 185 PANTHER PTHR30295:SF1 23 185 2.5E-48 T 22-04-2016 RPIC_RS00670 d77370085b0ab6f8f0b049f3d37d76b3 185 Gene3D G3DSA:1.20.1260.10 38 183 3.4E-50 T 22-04-2016 IPR012347 Ferritin-related RPIC_RS00670 d77370085b0ab6f8f0b049f3d37d76b3 185 PANTHER PTHR30295 23 185 2.5E-48 T 22-04-2016 RPIC_RS00670 d77370085b0ab6f8f0b049f3d37d76b3 185 Pfam PF00210 Ferritin-like domain 48 183 1.2E-28 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 Pfam PF12848 ABC transporter 224 309 2.0E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 SUPERFAMILY SSF52540 296 536 1.29E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 SMART SM00382 343 519 3.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 SMART SM00382 26 238 3.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 Pfam PF00005 ABC transporter 18 184 2.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 Pfam PF00005 ABC transporter 335 475 1.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 Gene3D G3DSA:3.40.50.300 319 537 1.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 Gene3D G3DSA:3.40.50.300 121 270 7.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 Gene3D G3DSA:3.40.50.300 2 88 7.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 SUPERFAMILY SSF52540 6 237 4.85E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 PANTHER PTHR19211 2 536 0.0 T 22-04-2016 RPIC_RS06620 5257abc135a999d14611a6e9f99a2786 540 PANTHER PTHR19211:SF38 2 536 0.0 T 22-04-2016 RPIC_RS18230 9b37c410e7787402e2acdfc1169c9c8d 286 PANTHER PTHR10120:SF19 1 284 4.2E-103 T 22-04-2016 RPIC_RS18230 9b37c410e7787402e2acdfc1169c9c8d 286 PANTHER PTHR10120 1 284 4.2E-103 T 22-04-2016 RPIC_RS18230 9b37c410e7787402e2acdfc1169c9c8d 286 Hamap MF_00188 Protease HtpX [htpX]. 4 278 29.322 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 RPIC_RS18230 9b37c410e7787402e2acdfc1169c9c8d 286 Gene3D G3DSA:3.30.2010.10 56 146 1.1E-33 T 22-04-2016 RPIC_RS18230 9b37c410e7787402e2acdfc1169c9c8d 286 Pfam PF01435 Peptidase family M48 67 278 9.4E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 30 284 1.8E-98 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 Gene3D G3DSA:1.10.3720.10 31 287 3.2E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 284 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 PANTHER PTHR30406 20 292 1.6E-163 T 22-04-2016 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 SUPERFAMILY SSF161098 37 276 2.35E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 27 286 3.6E-128 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 RPIC_RS06070 ad01e252ab7d555136cd543a9ba5ee5f 326 PANTHER PTHR30406:SF1 20 292 1.6E-163 T 22-04-2016 RPIC_RS01230 189d6f9700c0a938a848035464aed9c5 207 Gene3D G3DSA:2.50.20.10 18 207 1.4E-41 T 22-04-2016 RPIC_RS01230 189d6f9700c0a938a848035464aed9c5 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 173 3.3E-20 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RPIC_RS01230 189d6f9700c0a938a848035464aed9c5 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 7 207 20.856 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RPIC_RS01230 189d6f9700c0a938a848035464aed9c5 207 SUPERFAMILY SSF89392 23 206 3.92E-35 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC_RS01230 189d6f9700c0a938a848035464aed9c5 207 Pfam PF03550 Outer membrane lipoprotein LolB 46 207 2.7E-37 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 PANTHER PTHR30203 3 503 2.0E-87 T 22-04-2016 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 SUPERFAMILY SSF56954 81 496 4.71E-93 T 22-04-2016 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 SUPERFAMILY SSF56954 13 44 4.71E-93 T 22-04-2016 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 Pfam PF02321 Outer membrane efflux protein 91 282 4.3E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 Pfam PF02321 Outer membrane efflux protein 313 491 6.0E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 PANTHER PTHR30203:SF9 3 503 2.0E-87 T 22-04-2016 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 Gene3D G3DSA:1.20.1600.10 79 497 1.1E-87 T 22-04-2016 RPIC_RS14505 5b763cff10f1af775368c226dd3bcc27 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 493 4.5E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 PANTHER PTHR30203 3 503 2.0E-87 T 22-04-2016 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 SUPERFAMILY SSF56954 81 496 4.71E-93 T 22-04-2016 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 SUPERFAMILY SSF56954 13 44 4.71E-93 T 22-04-2016 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 Pfam PF02321 Outer membrane efflux protein 91 282 4.3E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 Pfam PF02321 Outer membrane efflux protein 313 491 6.0E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 PANTHER PTHR30203:SF9 3 503 2.0E-87 T 22-04-2016 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 Gene3D G3DSA:1.20.1600.10 79 497 1.1E-87 T 22-04-2016 RPIC_RS08210 5b763cff10f1af775368c226dd3bcc27 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 24 493 4.5E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 SUPERFAMILY SSF53178 1 197 3.27E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 190 36.783 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 Pfam PF01195 Peptidyl-tRNA hydrolase 4 195 2.0E-56 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 PANTHER PTHR17224:SF1 2 199 7.6E-75 T 22-04-2016 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 Gene3D G3DSA:3.40.50.1470 1 198 1.0E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 197 1.7E-61 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 PANTHER PTHR17224 2 199 7.6E-75 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RPIC_RS01205 95782fe2b4a411c34028072095d2ff1b 200 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 Pfam PF03239 Iron permease FTR1 family 503 589 3.3E-7 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 Pfam PF03239 Iron permease FTR1 family 360 501 2.3E-19 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 Gene3D G3DSA:1.10.760.10 124 223 4.1E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 PANTHER PTHR31632 375 629 9.4E-49 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 PANTHER PTHR31632:SF4 375 629 9.4E-49 T 22-04-2016 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 133 214 1.2E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS08910 a3dd1cd0351f73bc9432b3340a93c3b5 640 SUPERFAMILY SSF46626 114 224 3.25E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS09225 e12e4624ac1d890cd85307f3b43fecc9 71 SUPERFAMILY SSF54593 4 69 5.34E-5 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS09225 e12e4624ac1d890cd85307f3b43fecc9 71 Gene3D G3DSA:3.10.180.10 4 70 7.5E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS04255 cf72c02f121988aeb5c5ff28ad7cfaba 132 SUPERFAMILY SSF46626 6 125 1.31E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS04255 cf72c02f121988aeb5c5ff28ad7cfaba 132 Pfam PF00034 Cytochrome c 29 124 2.9E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS04255 cf72c02f121988aeb5c5ff28ad7cfaba 132 Gene3D G3DSA:1.10.760.10 15 125 9.2E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 2.1E-188 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 PANTHER PTHR30304 1 349 4.4E-121 T 22-04-2016 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 SUPERFAMILY SSF51569 3 329 3.37E-108 T 22-04-2016 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 1.9E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 Gene3D G3DSA:3.20.20.70 1 335 6.3E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 4.3E-101 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 PIRSF PIRSF001359 1 329 2.5E-85 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC_RS02420 27b2580b6b2496e8b9c5403b123d34c5 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RPIC_RS12010 7ff50674bb4b9e8022ee4d3d5558c000 317 SUPERFAMILY SSF102405 98 295 3.05E-57 T 22-04-2016 RPIC_RS12010 7ff50674bb4b9e8022ee4d3d5558c000 317 PANTHER PTHR31223 65 301 9.4E-90 T 22-04-2016 RPIC_RS12010 7ff50674bb4b9e8022ee4d3d5558c000 317 PANTHER PTHR31223:SF1 65 301 9.4E-90 T 22-04-2016 RPIC_RS12010 7ff50674bb4b9e8022ee4d3d5558c000 317 Pfam PF03641 Possible lysine decarboxylase 165 294 1.8E-31 T 22-04-2016 IPR031100 LOG family RPIC_RS12010 7ff50674bb4b9e8022ee4d3d5558c000 317 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 123 296 5.6E-44 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RPIC_RS12010 7ff50674bb4b9e8022ee4d3d5558c000 317 Gene3D G3DSA:3.40.50.450 101 304 5.2E-63 T 22-04-2016 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 5.9E-75 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 Gene3D G3DSA:3.20.20.70 2 264 9.7E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.277 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 Pfam PF00290 Tryptophan synthase alpha chain 8 255 3.0E-85 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 PANTHER PTHR10314 1 51 5.9E-20 T 22-04-2016 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 PANTHER PTHR10314 74 260 5.9E-20 T 22-04-2016 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 PANTHER PTHR10314:SF4 1 51 5.9E-20 T 22-04-2016 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 PANTHER PTHR10314:SF4 74 260 5.9E-20 T 22-04-2016 RPIC_RS10500 63610df898386c3c8dfe0cd2cabb4bc2 265 SUPERFAMILY SSF51366 1 252 1.51E-90 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 SUPERFAMILY SSF46955 4 124 2.31E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 Gene3D G3DSA:1.10.1660.10 57 132 3.7E-24 T 22-04-2016 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 Gene3D G3DSA:1.10.1660.10 3 56 5.5E-26 T 22-04-2016 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 5.1E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 5.1E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 5.1E-8 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 PANTHER PTHR30204:SF18 1 114 2.0E-39 T 22-04-2016 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 PANTHER PTHR30204 1 114 2.0E-39 T 22-04-2016 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 1.2E-51 T 22-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 SMART SM00422 3 72 1.1E-27 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08070 cef7ea6355230e4c4174a4292ee26fda 143 Pfam PF13411 MerR HTH family regulatory protein 4 70 6.0E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 SUPERFAMILY SSF74650 37 418 2.57E-150 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 SUPERFAMILY SSF81296 420 532 3.92E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 Gene3D G3DSA:2.60.40.10 421 532 4.2E-34 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 37 529 3.4E-195 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 537 57.993 T 22-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 PANTHER PTHR30504 21 532 1.7E-255 T 22-04-2016 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 Gene3D G3DSA:2.70.98.10 36 420 4.1E-164 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 PIRSF PIRSF006281 5 533 1.8E-202 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 RPIC_RS16525 f75f64b0f8fd6b6cf012fd84f8f317d2 537 PANTHER PTHR30504:SF3 21 532 1.7E-255 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 PANTHER PTHR24960:SF45 29 403 6.5E-123 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 Gene3D G3DSA:2.60.40.10 364 487 2.3E-33 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 Gene3D G3DSA:1.10.1060.10 227 284 3.0E-7 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 Pfam PF12801 4Fe-4S binding domain 99 140 2.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 Gene3D G3DSA:3.30.70.20 285 328 5.0E-6 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 SUPERFAMILY SSF54862 177 374 3.35E-34 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 SUPERFAMILY SSF54862 109 131 3.35E-34 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 PANTHER PTHR24960 29 403 6.5E-123 T 22-04-2016 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 364 486 2.8E-29 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 45 484 5.3E-149 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 RPIC_RS05510 e09c0fa91bb4b5af034d97adc9dcd4ad 487 Pfam PF13746 4Fe-4S dicluster domain 223 329 2.1E-43 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS15275 0bbf607be93ddbb9331a22f87166772c 217 SUPERFAMILY SSF47240 53 132 3.38E-17 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS15275 0bbf607be93ddbb9331a22f87166772c 217 PANTHER PTHR11237:SF3 2 217 1.0E-101 T 22-04-2016 RPIC_RS15275 0bbf607be93ddbb9331a22f87166772c 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 6 217 33.287 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RPIC_RS15275 0bbf607be93ddbb9331a22f87166772c 217 Gene3D G3DSA:1.20.1260.10 49 187 9.0E-9 T 22-04-2016 IPR012347 Ferritin-related RPIC_RS15275 0bbf607be93ddbb9331a22f87166772c 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 216 7.8E-45 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RPIC_RS15275 0bbf607be93ddbb9331a22f87166772c 217 PANTHER PTHR11237 2 217 1.0E-101 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 PANTHER PTHR30154:SF28 1 155 9.6E-53 T 22-04-2016 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 SUPERFAMILY SSF46785 2 92 1.16E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 PANTHER PTHR30154 1 155 9.6E-53 T 22-04-2016 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 Gene3D G3DSA:1.10.10.10 1 55 7.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 SUPERFAMILY SSF54909 64 153 1.61E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 SMART SM00344 4 113 5.2E-36 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 1.3E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 1.8E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 1.8E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 1.8E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 Pfam PF01037 Lrp/AsnC ligand binding domain 72 142 2.0E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS17590 543b363d27d80061bdc95c5ee22ced7a 158 Gene3D G3DSA:3.30.70.920 57 141 8.6E-28 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS07630 3998d948ac2db6634522e9f592ab6f54 327 SUPERFAMILY SSF55797 151 182 8.11E-8 T 22-04-2016 IPR014044 CAP domain RPIC_RS07630 3998d948ac2db6634522e9f592ab6f54 327 SUPERFAMILY SSF55797 60 114 8.11E-8 T 22-04-2016 IPR014044 CAP domain RPIC_RS07630 3998d948ac2db6634522e9f592ab6f54 327 Pfam PF00188 Cysteine-rich secretory protein family 66 182 8.1E-8 T 22-04-2016 IPR014044 CAP domain RPIC_RS11895 1636e0d0028e98edb5a891a21f8a9851 425 Gene3D G3DSA:3.40.50.2300 167 315 3.2E-14 T 22-04-2016 RPIC_RS11895 1636e0d0028e98edb5a891a21f8a9851 425 SUPERFAMILY SSF53822 33 392 1.48E-51 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS11895 1636e0d0028e98edb5a891a21f8a9851 425 PANTHER PTHR30483 1 421 1.3E-31 T 22-04-2016 RPIC_RS11895 1636e0d0028e98edb5a891a21f8a9851 425 Pfam PF13458 Periplasmic binding protein 33 386 1.1E-51 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS11895 1636e0d0028e98edb5a891a21f8a9851 425 Gene3D G3DSA:3.40.50.2300 316 372 3.3E-22 T 22-04-2016 RPIC_RS11895 1636e0d0028e98edb5a891a21f8a9851 425 Gene3D G3DSA:3.40.50.2300 29 166 3.3E-22 T 22-04-2016 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.927 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 Gene3D G3DSA:3.30.70.600 3 102 1.1E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.3E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 SUPERFAMILY SSF54999 5 102 1.57E-38 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 PANTHER PTHR11700 1 102 4.3E-52 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.3E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.6E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16285 760f32077436fb77c6e9cd9059e0f7bb 103 SMART SM01403 7 101 1.2E-57 T 22-04-2016 IPR027486 Ribosomal protein S10 domain RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 2 220 1.4E-117 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 SMART SM00882 6 219 2.9E-83 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 Gene3D G3DSA:3.40.1080.10 4 218 4.1E-88 T 22-04-2016 RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 SUPERFAMILY SSF100950 2 219 9.77E-79 T 22-04-2016 RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 PANTHER PTHR13707 1 218 1.4E-95 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS12125 665339d9e91d7f7c3a1e02f0344a4d8b 229 Pfam PF01144 Coenzyme A transferase 9 218 2.9E-69 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS07460 ac32fedc8bdaae2db5dae7c284030cd3 232 PIRSF PIRSF009320 3 229 4.1E-42 T 22-04-2016 RPIC_RS07460 ac32fedc8bdaae2db5dae7c284030cd3 232 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 177 5.8E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS07460 ac32fedc8bdaae2db5dae7c284030cd3 232 SUPERFAMILY SSF52540 4 222 1.88E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07460 ac32fedc8bdaae2db5dae7c284030cd3 232 Gene3D G3DSA:3.40.50.300 5 228 2.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07460 ac32fedc8bdaae2db5dae7c284030cd3 232 PANTHER PTHR13696 6 231 1.9E-31 T 22-04-2016 RPIC_RS07460 ac32fedc8bdaae2db5dae7c284030cd3 232 PANTHER PTHR13696:SF54 6 231 1.9E-31 T 22-04-2016 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 SUPERFAMILY SSF51679 1 357 2.75E-96 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 Pfam PF00296 Luciferase-like monooxygenase 1 331 1.5E-87 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 355 3.1E-191 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 Gene3D G3DSA:3.20.20.30 293 358 3.6E-105 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 Gene3D G3DSA:3.20.20.30 1 255 3.6E-105 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 385 69.929 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 PANTHER PTHR30011 1 383 1.7E-194 T 22-04-2016 RPIC_RS06035 a16a722a5afd75ae0cefc7e6e1bee801 387 PANTHER PTHR30011:SF1 1 383 1.7E-194 T 22-04-2016 RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 Pfam PF00005 ABC transporter 29 182 9.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 PANTHER PTHR24220 13 253 2.5E-104 T 22-04-2016 RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 Gene3D G3DSA:3.40.50.300 10 251 3.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 PANTHER PTHR24220:SF358 13 253 2.5E-104 T 22-04-2016 RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 SMART SM00382 36 229 4.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 4.4E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC_RS12085 6af33de2e0c3d35746e5bae263f1295d 257 SUPERFAMILY SSF52540 10 252 5.12E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 PRINTS PR01011 Glutathione peroxidase family signature 89 106 7.9E-12 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 PRINTS PR01011 Glutathione peroxidase family signature 184 193 7.9E-12 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 PRINTS PR01011 Glutathione peroxidase family signature 124 140 7.9E-12 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 PANTHER PTHR11592 71 224 9.0E-63 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 Gene3D G3DSA:3.40.30.10 72 223 1.0E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 PANTHER PTHR11592:SF40 71 224 9.0E-63 T 22-04-2016 RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 Pfam PF00255 Glutathione peroxidase 73 176 1.0E-30 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 SUPERFAMILY SSF52833 72 222 2.28E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00785 30876c7a8101c86ea5fdade919a7437d 231 ProSitePatterns PS00460 Glutathione peroxidases active site. 91 106 - T 22-04-2016 IPR029759 Glutathione peroxidase active site RPIC_RS17175 96e10589303b687a4acda5d4d7993b96 243 SUPERFAMILY SSF53098 44 227 4.24E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS17175 96e10589303b687a4acda5d4d7993b96 243 Gene3D G3DSA:3.30.420.10 44 230 9.8E-10 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PANTHER PTHR24322 12 138 8.6E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PANTHER PTHR24322 154 186 8.6E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.0E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PANTHER PTHR24322:SF25 12 138 8.6E-62 T 22-04-2016 RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 PANTHER PTHR24322:SF25 154 186 8.6E-62 T 22-04-2016 RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 Gene3D G3DSA:3.40.50.720 2 257 4.5E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 3.5E-46 T 22-04-2016 RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS16910 567a87ade8b54f218c60cf778ca508b7 262 SUPERFAMILY SSF51735 1 257 5.63E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS13795 1819167dd06ecc5779df654dc7baa3e8 181 Gene3D G3DSA:3.10.450.50 54 181 2.0E-31 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS13795 1819167dd06ecc5779df654dc7baa3e8 181 Pfam PF07366 SnoaL-like polyketide cyclase 54 177 2.0E-36 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC_RS13795 1819167dd06ecc5779df654dc7baa3e8 181 PANTHER PTHR38436 46 181 3.7E-32 T 22-04-2016 RPIC_RS13795 1819167dd06ecc5779df654dc7baa3e8 181 SUPERFAMILY SSF54427 54 181 1.1E-31 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 9.4E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 Gene3D G3DSA:2.10.150.10 1 101 2.5E-51 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 SUPERFAMILY SSF51278 1 101 2.09E-48 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 Pfam PF00699 Urease beta subunit 3 100 8.1E-46 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 PANTHER PTHR33569 1 101 4.5E-65 T 22-04-2016 RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.209 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 RPIC_RS10740 98d319cc1443854e58552f9d985d7d55 101 PANTHER PTHR33569:SF1 1 101 4.5E-65 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 Pfam PF13416 Bacterial extracellular solute-binding protein 66 321 1.9E-22 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 SUPERFAMILY SSF53850 51 348 1.28E-58 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 PANTHER PTHR30006:SF10 13 368 2.0E-95 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 PANTHER PTHR30006 13 368 2.0E-95 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 Gene3D G3DSA:3.40.190.10 22 148 6.8E-60 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 Gene3D G3DSA:3.40.190.10 289 363 6.8E-60 T 22-04-2016 RPIC_RS15865 4b5015e711eead6dadebae6d50f42ca7 368 Gene3D G3DSA:3.40.190.10 149 288 1.7E-59 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 Pfam PF13616 PPIC-type PPIASE domain 268 374 1.2E-30 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 Gene3D G3DSA:3.10.50.40 262 396 1.4E-45 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 Pfam PF13624 SurA N-terminal domain 1 166 4.2E-43 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 PANTHER PTHR10657 244 529 4.8E-81 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 PANTHER PTHR10657 1 172 4.8E-81 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 SUPERFAMILY SSF109998 204 243 7.06E-26 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 SUPERFAMILY SSF109998 41 170 7.06E-26 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 SUPERFAMILY SSF54534 262 373 1.96E-33 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 311 332 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 PANTHER PTHR10657:SF11 244 529 4.8E-81 T 22-04-2016 RPIC_RS09140 3ea5f5375eea9d3ed91670f34d2a2a7a 646 PANTHER PTHR10657:SF11 1 172 4.8E-81 T 22-04-2016 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 Gene3D G3DSA:1.10.150.130 99 193 4.2E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 Gene3D G3DSA:1.10.443.10 205 378 7.5E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 PANTHER PTHR30629 2 378 2.4E-32 T 22-04-2016 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 SUPERFAMILY SSF56349 98 378 3.53E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 Pfam PF00589 Phage integrase family 232 370 5.8E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 99 154 1.1E-8 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 PANTHER PTHR30629:SF2 2 378 2.4E-32 T 22-04-2016 RPIC_RS12810 1488d2f35a943d48017d1f1a937e04e4 399 Pfam PF13356 Domain of unknown function (DUF4102) 6 93 4.4E-17 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 PANTHER PTHR23417:SF14 37 256 8.3E-73 T 22-04-2016 RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 68 255 4.2E-54 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 SUPERFAMILY SSF53335 34 256 1.52E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 Gene3D G3DSA:3.40.50.150 52 240 4.7E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 Pfam PF02390 Putative methyltransferase 87 250 7.8E-54 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 PANTHER PTHR23417 37 256 8.3E-73 T 22-04-2016 RPIC_RS03185 7b1f4cf9e560f773119bcaf7d2543a3b 257 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 43 256 30.35 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 PANTHER PTHR33797 1 140 9.6E-68 T 22-04-2016 RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 Pfam PF02566 OsmC-like protein 43 138 4.2E-16 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 PANTHER PTHR33797:SF2 1 140 9.6E-68 T 22-04-2016 RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 2.2E-53 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 SUPERFAMILY SSF82784 1 140 8.9E-44 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 Gene3D G3DSA:2.20.25.10 1 47 9.4E-22 T 22-04-2016 RPIC_RS17055 1521b2a324cadfa6ce351abb6f6c7e35 141 Gene3D G3DSA:3.30.300.20 48 140 1.5E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 Gene3D G3DSA:1.20.140.10 232 396 6.1E-32 T 22-04-2016 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 6.7E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 SUPERFAMILY SSF47203 231 397 4.51E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 PANTHER PTHR10909:SF229 366 398 4.5E-160 T 22-04-2016 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 PANTHER PTHR10909:SF229 1 347 4.5E-160 T 22-04-2016 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 5.7E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 PANTHER PTHR10909 366 398 4.5E-160 T 22-04-2016 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 PANTHER PTHR10909 1 347 4.5E-160 T 22-04-2016 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 Gene3D G3DSA:2.40.110.10 124 231 5.8E-38 T 22-04-2016 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 4.0E-22 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 SUPERFAMILY SSF56645 2 244 6.41E-77 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS10800 d6596ff7c23d804b69c18543f27206df 398 Gene3D G3DSA:1.10.540.10 1 119 7.9E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 RPIC_RS12100 86dbc92ac4f6f24024d49b6f208ca965 132 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 118 9.1E-26 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS12100 86dbc92ac4f6f24024d49b6f208ca965 132 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 1.9E-59 T 22-04-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 RPIC_RS12100 86dbc92ac4f6f24024d49b6f208ca965 132 SUPERFAMILY SSF69118 5 123 6.91E-37 T 22-04-2016 IPR029032 AhpD-like RPIC_RS12100 86dbc92ac4f6f24024d49b6f208ca965 132 PANTHER PTHR33570:SF2 1 129 8.3E-61 T 22-04-2016 RPIC_RS12100 86dbc92ac4f6f24024d49b6f208ca965 132 Gene3D G3DSA:1.20.1290.10 5 126 2.6E-26 T 22-04-2016 IPR029032 AhpD-like RPIC_RS12100 86dbc92ac4f6f24024d49b6f208ca965 132 PANTHER PTHR33570 1 129 8.3E-61 T 22-04-2016 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 Pfam PF01007 Inward rectifier potassium channel 85 302 9.4E-39 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 Gene3D G3DSA:1.10.287.70 36 130 8.0E-25 T 22-04-2016 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 SUPERFAMILY SSF81296 121 302 3.03E-59 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 SUPERFAMILY SSF81324 37 145 3.66E-25 T 22-04-2016 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 89 111 1.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 285 299 1.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 261 278 1.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 240 260 1.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 209 227 1.4E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 Gene3D G3DSA:2.60.40.1400 131 302 5.8E-52 T 22-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PANTHER PTHR11767:SF58 38 301 1.6E-58 T 22-04-2016 RPIC_RS01595 eb63466f22730476f54d7af2c34d207f 305 PANTHER PTHR11767 38 301 1.6E-58 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 480 2.2E-120 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 Gene3D G3DSA:1.20.1600.10 70 484 7.7E-120 T 22-04-2016 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 PANTHER PTHR30203:SF15 1 499 2.3E-159 T 22-04-2016 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 SUPERFAMILY SSF56954 71 483 1.1E-116 T 22-04-2016 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 SUPERFAMILY SSF56954 3 38 1.1E-116 T 22-04-2016 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 Pfam PF02321 Outer membrane efflux protein 80 269 2.3E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 Pfam PF02321 Outer membrane efflux protein 297 478 3.2E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS18585 3b0046d6d90455ebb404baac84f98fac 514 PANTHER PTHR30203 1 499 2.3E-159 T 22-04-2016 RPIC_RS08490 18f3f9671c2ce5621a9c42491b9c9e2e 73 SMART SM00528 29 72 4.1E-7 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RPIC_RS08490 18f3f9671c2ce5621a9c42491b9c9e2e 73 Gene3D G3DSA:4.10.430.10 34 71 2.4E-12 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 RPIC_RS08490 18f3f9671c2ce5621a9c42491b9c9e2e 73 Pfam PF00816 H-NS histone family 2 65 2.9E-15 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 RPIC_RS08490 18f3f9671c2ce5621a9c42491b9c9e2e 73 SUPERFAMILY SSF81273 32 71 1.61E-9 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 PANTHER PTHR23501 12 486 5.7E-110 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 Gene3D G3DSA:1.20.1250.20 279 481 1.3E-15 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 SUPERFAMILY SSF103473 264 486 1.1E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 SUPERFAMILY SSF103473 14 215 1.1E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 416 435 3.9E-7 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 3.9E-7 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 3.9E-7 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 3.9E-7 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 Gene3D G3DSA:1.20.1250.20 17 205 5.3E-25 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 PANTHER PTHR23501:SF31 12 486 5.7E-110 T 22-04-2016 RPIC_RS16940 6fe166e34c794dcb051134c8d329b642 488 Pfam PF07690 Major Facilitator Superfamily 26 425 1.3E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS12405 155b616a1abf33ebf9cd159bc46b2604 227 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 4 227 2.2E-76 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RPIC_RS12405 155b616a1abf33ebf9cd159bc46b2604 227 PANTHER PTHR30598 2 227 7.2E-76 T 22-04-2016 RPIC_RS12405 155b616a1abf33ebf9cd159bc46b2604 227 Pfam PF02665 Nitrate reductase gamma subunit 7 227 4.5E-77 T 22-04-2016 IPR023234 NarG-like domain RPIC_RS12405 155b616a1abf33ebf9cd159bc46b2604 227 SUPERFAMILY SSF103501 3 227 1.57E-61 T 22-04-2016 IPR023234 NarG-like domain RPIC_RS12405 155b616a1abf33ebf9cd159bc46b2604 227 Gene3D G3DSA:1.20.950.20 4 213 8.3E-60 T 22-04-2016 RPIC_RS12405 155b616a1abf33ebf9cd159bc46b2604 227 PANTHER PTHR30598:SF3 2 227 7.2E-76 T 22-04-2016 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 6.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 Gene3D G3DSA:1.10.10.10 128 232 3.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 Pfam PF00072 Response regulator receiver domain 5 117 1.7E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 PANTHER PTHR26402:SF576 3 231 3.3E-69 T 22-04-2016 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 SUPERFAMILY SSF52172 3 128 3.98E-28 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 Gene3D G3DSA:3.40.50.2300 3 127 6.3E-25 T 22-04-2016 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 SUPERFAMILY SSF46894 126 231 1.08E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 PANTHER PTHR26402 3 231 3.3E-69 T 22-04-2016 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 SMART SM00448 3 116 1.5E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18540 ea105b885aba6c3df950aab41b7f6828 278 SMART SM00862 155 230 2.5E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS23770 ce629337ada51fb7e5a45b7dba8d9dac 106 Pfam PF04116 Fatty acid hydroxylase superfamily 8 104 1.4E-21 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 8.0E-35 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 PANTHER PTHR13822 1 138 2.4E-42 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 Gene3D G3DSA:2.60.15.10 1 88 5.2E-32 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 4.0E-8 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.684 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 Gene3D G3DSA:1.20.5.440 90 131 1.7E-14 T 22-04-2016 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 SUPERFAMILY SSF46604 87 135 2.62E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 4.3E-31 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 SUPERFAMILY SSF51344 3 85 1.7E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17400 4d6f0a3087f13cc27ca0057f7062e283 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 4.8E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 RPIC_RS17135 f8fe180ac481db7d9470944ab08fd27a 295 SUPERFAMILY SSF103481 42 134 5.89E-9 T 22-04-2016 RPIC_RS17135 f8fe180ac481db7d9470944ab08fd27a 295 PANTHER PTHR32322:SF9 3 295 6.8E-87 T 22-04-2016 RPIC_RS17135 f8fe180ac481db7d9470944ab08fd27a 295 Pfam PF00892 EamA-like transporter family 145 283 1.4E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS17135 f8fe180ac481db7d9470944ab08fd27a 295 Pfam PF00892 EamA-like transporter family 6 130 4.5E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS17135 f8fe180ac481db7d9470944ab08fd27a 295 PANTHER PTHR32322 3 295 6.8E-87 T 22-04-2016 RPIC_RS17135 f8fe180ac481db7d9470944ab08fd27a 295 SUPERFAMILY SSF103481 204 287 4.71E-10 T 22-04-2016 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 Pfam PF00072 Response regulator receiver domain 4 113 2.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 PANTHER PTHR26402:SF575 1 222 1.4E-100 T 22-04-2016 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 SUPERFAMILY SSF46894 126 223 4.82E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 SMART SM00448 1 112 3.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 3.5E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 SMART SM00862 146 221 2.4E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 Gene3D G3DSA:3.40.50.2300 1 123 7.7E-37 T 22-04-2016 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 Gene3D G3DSA:1.10.10.10 126 224 4.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 SUPERFAMILY SSF52172 1 118 2.28E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 7.7E-104 T 22-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 RPIC_RS08550 72c107cdbe5ea1ac92ba872ce60570d0 228 PANTHER PTHR26402 1 222 1.4E-100 T 22-04-2016 RPIC_RS17010 fb34c5ea20c2e39f916d18a6eeb4bc48 238 Pfam PF03412 Peptidase C39 family 58 189 8.8E-23 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 RPIC_RS17010 fb34c5ea20c2e39f916d18a6eeb4bc48 238 Gene3D G3DSA:3.90.70.10 80 191 1.3E-8 T 22-04-2016 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 SUPERFAMILY SSF54913 1 112 7.63E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 52 75 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 23 41 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 83 103 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PRINTS PR00340 P-II protein signature 2 17 3.8E-45 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 Gene3D G3DSA:3.30.70.120 1 112 3.1E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PANTHER PTHR30115:SF12 1 112 2.3E-68 T 22-04-2016 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PANTHER PTHR30115 1 112 2.3E-68 T 22-04-2016 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 SMART SM00938 4 105 3.6E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 PIRSF PIRSF039144 1 112 1.5E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.3E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS12605 1fc62da8c063a2e47dc07402e6f0abc8 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 SUPERFAMILY SSF46785 30 103 3.49E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 SMART SM00346 30 120 2.0E-19 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 PANTHER PTHR30136:SF8 25 287 1.6E-66 T 22-04-2016 RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 Gene3D G3DSA:3.30.450.40 106 280 1.8E-41 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 SUPERFAMILY SSF55781 88 278 8.5E-34 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 Pfam PF09339 IclR helix-turn-helix domain 32 83 7.3E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 PANTHER PTHR30136 25 287 1.6E-66 T 22-04-2016 RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 Pfam PF01614 Bacterial transcriptional regulator 149 272 5.2E-10 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC_RS00755 129e8ce131b2f972a266d02804544285 302 Gene3D G3DSA:1.10.10.10 29 103 7.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14580 6147591d4313de2c251c2c8da25f35cf 198 PANTHER PTHR34406:SF1 1 197 6.7E-37 T 22-04-2016 RPIC_RS14580 6147591d4313de2c251c2c8da25f35cf 198 Gene3D G3DSA:2.40.128.110 22 191 4.4E-48 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14580 6147591d4313de2c251c2c8da25f35cf 198 PANTHER PTHR34406 1 197 6.7E-37 T 22-04-2016 RPIC_RS14580 6147591d4313de2c251c2c8da25f35cf 198 SMART SM00867 24 189 4.4E-58 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14580 6147591d4313de2c251c2c8da25f35cf 198 SUPERFAMILY SSF101874 21 191 4.05E-47 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14580 6147591d4313de2c251c2c8da25f35cf 198 Pfam PF04264 YceI-like domain 25 186 3.9E-34 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 Pfam PF04055 Radical SAM superfamily 46 215 1.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 42 388 1.6E-115 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 Pfam PF06969 HemN C-terminal domain 344 406 3.3E-11 T 22-04-2016 IPR010723 HemN, C-terminal RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 PANTHER PTHR13932 40 422 2.2E-176 T 22-04-2016 RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 PANTHER PTHR13932:SF7 40 422 2.2E-176 T 22-04-2016 RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 SMART SM00729 41 257 2.2E-52 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 SUPERFAMILY SSF102114 37 417 1.96E-109 T 22-04-2016 RPIC_RS11245 1b1ac2c742c28b9c95e77a0316aa2267 422 Gene3D G3DSA:3.80.30.20 42 273 2.1E-35 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 SMART SM00388 140 213 1.4E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 Pfam PF00072 Response regulator receiver domain 10 120 2.0E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 SMART SM00448 8 121 5.1E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 143 206 8.2E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 SUPERFAMILY SSF47384 134 210 4.9E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 Gene3D G3DSA:3.30.565.10 198 368 6.9E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 368 7.8E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 SUPERFAMILY SSF52172 7 132 3.84E-25 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 SMART SM00387 257 368 6.4E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 SUPERFAMILY SSF55874 204 368 1.14E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 314 1.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 349 1.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 368 1.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 PANTHER PTHR24423 39 64 1.5E-24 T 22-04-2016 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 PANTHER PTHR24423 117 368 1.5E-24 T 22-04-2016 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 Gene3D G3DSA:3.40.50.2300 9 127 9.9E-25 T 22-04-2016 RPIC_RS14655 556d0e3a3054343d75616ffda5823fb5 368 Gene3D G3DSA:1.10.287.130 140 197 1.3E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS00760 f5686be52ac21d7f382995fe94134e53 334 PANTHER PTHR30137 1 326 1.2E-56 T 22-04-2016 RPIC_RS00760 f5686be52ac21d7f382995fe94134e53 334 SUPERFAMILY SSF51679 1 326 2.09E-78 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS00760 f5686be52ac21d7f382995fe94134e53 334 Gene3D G3DSA:3.20.20.30 1 326 7.6E-85 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS00760 f5686be52ac21d7f382995fe94134e53 334 Pfam PF00296 Luciferase-like monooxygenase 4 297 1.5E-56 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 SUPERFAMILY SSF46785 8 142 1.39E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 Pfam PF01047 MarR family 34 90 9.0E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 Gene3D G3DSA:1.10.10.10 7 136 5.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 PANTHER PTHR33164 7 151 8.2E-42 T 22-04-2016 RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 9 137 9.9E-55 T 22-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 SMART SM00347 27 127 1.5E-21 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS09595 be626606e989c13fef0f8da26d8b40d8 154 PANTHER PTHR33164:SF13 7 151 8.2E-42 T 22-04-2016 RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 174 2.5E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 PANTHER PTHR30270 28 357 1.2E-102 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 Pfam PF02769 AIR synthase related protein, C-terminal domain 187 340 1.7E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 45 357 9.5E-95 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 SUPERFAMILY SSF55326 41 175 9.07E-36 T 22-04-2016 RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 Gene3D G3DSA:3.30.1330.10 40 176 4.0E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 PANTHER PTHR30270:SF0 28 357 1.2E-102 T 22-04-2016 RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 PIRSF PIRSF005303 38 357 5.6E-77 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 SUPERFAMILY SSF56042 180 341 1.12E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 Gene3D G3DSA:3.90.650.10 182 357 1.3E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS14845 e388ef91c2f2d0c52df169a19ef352ab 361 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 43 354 27.886 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 RPIC_RS15060 ac7439e7864576dc54118dde92dc54ca 182 PANTHER PTHR22573 15 180 2.3E-38 T 22-04-2016 RPIC_RS15060 ac7439e7864576dc54118dde92dc54ca 182 SUPERFAMILY SSF53271 16 180 3.41E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS15060 ac7439e7864576dc54118dde92dc54ca 182 Pfam PF00156 Phosphoribosyl transferase domain 15 165 4.2E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS15060 ac7439e7864576dc54118dde92dc54ca 182 Gene3D G3DSA:3.40.50.2020 14 181 2.2E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS15060 ac7439e7864576dc54118dde92dc54ca 182 PANTHER PTHR22573:SF56 15 180 2.3E-38 T 22-04-2016 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 Gene3D G3DSA:3.40.50.300 1 218 6.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.9E-16 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 Pfam PF00406 Adenylate kinase 5 185 8.5E-58 T 22-04-2016 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 PRINTS PR00094 Adenylate kinase signature 173 187 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 PRINTS PR00094 Adenylate kinase signature 81 97 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 PRINTS PR00094 Adenylate kinase signature 32 46 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 PRINTS PR00094 Adenylate kinase signature 4 17 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 PRINTS PR00094 Adenylate kinase signature 156 171 2.4E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 TIGRFAM TIGR01351 adk: adenylate kinase 2 188 1.1E-73 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 SUPERFAMILY SSF52540 1 216 8.84E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 PANTHER PTHR23359 1 221 1.8E-108 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS13840 1160cc132ecb28e93bf32215c7bb8cee 222 Hamap MF_00235 Adenylate kinase [adk]. 1 221 51.951 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 RPIC_RS01570 cde806ea2f93ff08d0e02c9a446dc7a9 227 Gene3D G3DSA:3.90.70.10 92 183 8.3E-13 T 22-04-2016 RPIC_RS01570 cde806ea2f93ff08d0e02c9a446dc7a9 227 Pfam PF03412 Peptidase C39 family 49 184 2.8E-23 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 9.8E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PANTHER PTHR19370:SF68 33 339 3.0E-59 T 22-04-2016 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 SUPERFAMILY SSF52343 207 340 2.36E-38 T 22-04-2016 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 239 248 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 306 314 5.0E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 Pfam PF00175 Oxidoreductase NAD-binding domain 215 319 3.0E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PANTHER PTHR19370 33 339 3.0E-59 T 22-04-2016 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 239 248 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 198 207 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 214 233 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 PRINTS PR00410 Phenol hydroxylase reductase family signature 306 314 1.2E-17 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 Gene3D G3DSA:3.10.20.30 3 90 1.9E-26 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 Pfam PF00970 Oxidoreductase FAD-binding domain 105 203 2.2E-15 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 SUPERFAMILY SSF54292 1 89 1.16E-24 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 Gene3D G3DSA:2.40.30.10 101 205 1.8E-30 T 22-04-2016 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 SUPERFAMILY SSF63380 102 205 2.15E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC_RS13310 8040024e8bfc6d1e8a0482804c2c1339 349 Gene3D G3DSA:3.40.50.80 207 341 1.3E-39 T 22-04-2016 RPIC_RS13470 42909629d9c2d85597db264a07b7690a 108 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 7 103 28.651 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RPIC_RS13470 42909629d9c2d85597db264a07b7690a 108 PANTHER PTHR33473 18 106 4.4E-34 T 22-04-2016 RPIC_RS13470 42909629d9c2d85597db264a07b7690a 108 SUPERFAMILY SSF54736 24 107 3.4E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC_RS13470 42909629d9c2d85597db264a07b7690a 108 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 25 103 1.7E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 RPIC_RS13470 42909629d9c2d85597db264a07b7690a 108 Gene3D G3DSA:3.30.1390.10 10 108 2.9E-42 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RPIC_RS03040 13bbdcfbe5cf3fa94bfbb0abbd9901b4 265 SUPERFAMILY SSF69593 29 262 5.49E-27 T 22-04-2016 RPIC_RS03040 13bbdcfbe5cf3fa94bfbb0abbd9901b4 265 PANTHER PTHR10434:SF8 1 198 5.5E-38 T 22-04-2016 RPIC_RS03040 13bbdcfbe5cf3fa94bfbb0abbd9901b4 265 Pfam PF01553 Acyltransferase 84 194 8.7E-22 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS03040 13bbdcfbe5cf3fa94bfbb0abbd9901b4 265 Gene3D G3DSA:3.40.1130.10 57 256 5.9E-14 T 22-04-2016 RPIC_RS03040 13bbdcfbe5cf3fa94bfbb0abbd9901b4 265 PANTHER PTHR10434 1 198 5.5E-38 T 22-04-2016 RPIC_RS03040 13bbdcfbe5cf3fa94bfbb0abbd9901b4 265 SMART SM00563 86 198 7.6E-33 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS12910 7c4a8b9241c556a387a20edf8aeb3a00 212 PANTHER PTHR13696 1 209 6.3E-65 T 22-04-2016 RPIC_RS12910 7c4a8b9241c556a387a20edf8aeb3a00 212 SUPERFAMILY SSF52540 1 210 1.95E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12910 7c4a8b9241c556a387a20edf8aeb3a00 212 PANTHER PTHR13696:SF54 1 209 6.3E-65 T 22-04-2016 RPIC_RS12910 7c4a8b9241c556a387a20edf8aeb3a00 212 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 159 1.4E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS12910 7c4a8b9241c556a387a20edf8aeb3a00 212 PIRSF PIRSF009320 1 210 1.3E-52 T 22-04-2016 RPIC_RS12910 7c4a8b9241c556a387a20edf8aeb3a00 212 Gene3D G3DSA:3.40.50.300 1 210 2.2E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12455 8b42a63cb0bdbdabe8ba9db232c601a2 185 PANTHER PTHR10681:SF104 44 163 3.8E-18 T 22-04-2016 RPIC_RS12455 8b42a63cb0bdbdabe8ba9db232c601a2 185 SUPERFAMILY SSF52833 15 162 5.79E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS12455 8b42a63cb0bdbdabe8ba9db232c601a2 185 Gene3D G3DSA:3.40.30.10 17 162 4.4E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS12455 8b42a63cb0bdbdabe8ba9db232c601a2 185 Pfam PF00578 AhpC/TSA family 45 158 3.0E-16 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS12455 8b42a63cb0bdbdabe8ba9db232c601a2 185 PANTHER PTHR10681 44 163 3.8E-18 T 22-04-2016 RPIC_RS12455 8b42a63cb0bdbdabe8ba9db232c601a2 185 ProSitePatterns PS00194 Thioredoxin family active site. 73 91 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS13160 61a2334d681c4098455b108a122b451a 275 PANTHER PTHR32552 64 273 9.1E-93 T 22-04-2016 RPIC_RS13160 61a2334d681c4098455b108a122b451a 275 PANTHER PTHR32552:SF23 64 273 9.1E-93 T 22-04-2016 RPIC_RS13160 61a2334d681c4098455b108a122b451a 275 SUPERFAMILY SSF53098 112 267 3.64E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS13160 61a2334d681c4098455b108a122b451a 275 Gene3D G3DSA:3.30.420.10 111 266 3.4E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS13160 61a2334d681c4098455b108a122b451a 275 Pfam PF00665 Integrase core domain 115 229 4.0E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS13730 61a2334d681c4098455b108a122b451a 275 PANTHER PTHR32552 64 273 9.1E-93 T 22-04-2016 RPIC_RS13730 61a2334d681c4098455b108a122b451a 275 PANTHER PTHR32552:SF23 64 273 9.1E-93 T 22-04-2016 RPIC_RS13730 61a2334d681c4098455b108a122b451a 275 SUPERFAMILY SSF53098 112 267 3.64E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS13730 61a2334d681c4098455b108a122b451a 275 Gene3D G3DSA:3.30.420.10 111 266 3.4E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS13730 61a2334d681c4098455b108a122b451a 275 Pfam PF00665 Integrase core domain 115 229 4.0E-26 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 Gene3D G3DSA:3.30.465.10 60 184 1.6E-18 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 PANTHER PTHR11748 20 373 3.0E-81 T 22-04-2016 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 Gene3D G3DSA:1.10.45.10 346 373 7.8E-8 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 PANTHER PTHR11748:SF1 20 373 3.0E-81 T 22-04-2016 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 Pfam PF02913 FAD linked oxidases, C-terminal domain 349 372 1.7E-4 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 SUPERFAMILY SSF56176 18 184 1.96E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 SUPERFAMILY SSF55103 147 373 8.9E-24 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC_RS14305 8ccd620af4fa99a2d107dde41701fe6e 377 Pfam PF01565 FAD binding domain 17 146 2.3E-21 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 Pfam PF01012 Electron transfer flavoprotein domain 4 169 5.8E-39 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 PANTHER PTHR10909 104 307 3.4E-118 T 22-04-2016 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 PANTHER PTHR10909:SF294 104 307 3.4E-118 T 22-04-2016 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 Gene3D G3DSA:3.40.50.1220 184 310 1.2E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 SUPERFAMILY SSF52402 4 186 2.51E-58 T 22-04-2016 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 PIRSF PIRSF000089 1 311 7.3E-107 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 SMART SM00893 3 182 1.5E-56 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 6.9E-35 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 SUPERFAMILY SSF52467 187 310 5.14E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RPIC_RS03890 cf63971804bf79ed82693f16fd765e43 311 Gene3D G3DSA:3.40.50.620 2 182 3.7E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 5.3E-188 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 Gene3D G3DSA:1.10.645.10 6 404 4.3E-62 T 22-04-2016 IPR029014 NiFe hydrogenase-like RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.065 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 3.5E-123 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 SUPERFAMILY SSF56762 16 417 1.44E-137 T 22-04-2016 IPR029014 NiFe hydrogenase-like RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 PANTHER PTHR11993 3 164 2.2E-238 T 22-04-2016 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 PANTHER PTHR11993 190 412 2.2E-238 T 22-04-2016 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 PANTHER PTHR11993:SF10 3 164 2.2E-238 T 22-04-2016 RPIC_RS10870 7d1a50e358dd66afd9592eb9f07943e5 417 PANTHER PTHR11993:SF10 190 412 2.2E-238 T 22-04-2016 RPIC_RS04265 c45b3e407353739d8b7fd03d1ecdedf0 311 Pfam PF00892 EamA-like transporter family 18 151 1.2E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS04265 c45b3e407353739d8b7fd03d1ecdedf0 311 Pfam PF00892 EamA-like transporter family 162 296 1.2E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS04265 c45b3e407353739d8b7fd03d1ecdedf0 311 SUPERFAMILY SSF103481 58 151 4.45E-15 T 22-04-2016 RPIC_RS04265 c45b3e407353739d8b7fd03d1ecdedf0 311 SUPERFAMILY SSF103481 208 299 1.57E-15 T 22-04-2016 RPIC_RS04265 c45b3e407353739d8b7fd03d1ecdedf0 311 PANTHER PTHR22911 1 303 2.8E-48 T 22-04-2016 RPIC_RS04265 c45b3e407353739d8b7fd03d1ecdedf0 311 PANTHER PTHR22911:SF23 1 303 2.8E-48 T 22-04-2016 RPIC_RS16530 f9d84eaed11899e95a4d71d4dea9c707 413 SUPERFAMILY SSF48208 28 395 9.07E-75 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 RPIC_RS16530 f9d84eaed11899e95a4d71d4dea9c707 413 Gene3D G3DSA:1.50.10.10 35 392 1.1E-45 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 RPIC_RS16530 f9d84eaed11899e95a4d71d4dea9c707 413 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 68 389 4.0E-41 T 22-04-2016 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 SUPERFAMILY SSF55174 7 73 3.73E-7 T 22-04-2016 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 Pfam PF00849 RNA pseudouridylate synthase 68 199 9.7E-16 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 PANTHER PTHR21600 1 237 8.9E-55 T 22-04-2016 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 Gene3D G3DSA:3.10.290.10 11 70 4.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 SUPERFAMILY SSF55120 67 232 5.44E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS03010 37a553933fb7fe081eedf4fd2804ef07 248 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 229 7.5E-42 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 169 711 3.3E-199 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 SUPERFAMILY SSF54665 24 149 1.83E-41 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 SMART SM01008 41 148 5.2E-50 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.30.365.10 196 290 1.7E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 PANTHER PTHR11908 16 783 0.0 T 22-04-2016 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 SUPERFAMILY SSF56003 148 780 7.85E-205 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 42 148 3.4E-27 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.90.1170.50 26 148 2.6E-42 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 27 782 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.30.365.10 469 637 1.1E-52 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 PANTHER PTHR11908:SF66 16 783 0.0 T 22-04-2016 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.30.365.10 150 195 1.6E-21 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.30.365.10 292 367 1.6E-21 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.30.365.10 368 468 2.6E-88 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS11055 9f12cdd79bc7703244d310d9c3a2c9d1 788 Gene3D G3DSA:3.30.365.10 638 779 2.6E-88 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 RPIC_RS04775 4f224967ef01e1144f48f7664ee3e9eb 300 SUPERFAMILY SSF56235 2 240 8.32E-32 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS04775 4f224967ef01e1144f48f7664ee3e9eb 300 Gene3D G3DSA:3.60.20.10 2 208 5.8E-12 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS04775 4f224967ef01e1144f48f7664ee3e9eb 300 PIRSF PIRSF009120 1 248 1.8E-118 T 22-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 Gene3D G3DSA:4.10.520.10 1 91 9.4E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 8.515098E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 8.515098E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 8.515098E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 SMART SM00411 1 91 2.5E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 SUPERFAMILY SSF47729 1 91 1.09E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.4E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS17625 28650a4e5e0aa26c9af0e7b25e6b116e 92 PANTHER PTHR33175 1 91 5.0E-37 T 22-04-2016 RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 Gene3D G3DSA:3.30.750.80 73 183 1.4E-37 T 22-04-2016 RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 Gene3D G3DSA:3.40.50.150 190 399 2.1E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 Gene3D G3DSA:2.30.130.10 1 70 5.5E-26 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 175 370 3.6E-29 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 SUPERFAMILY SSF53335 78 396 7.25E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 PANTHER PTHR11061:SF12 3 399 6.0E-106 T 22-04-2016 RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 SMART SM00359 2 87 7.2E-15 T 22-04-2016 IPR002478 PUA domain GO:0003723 RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 PANTHER PTHR11061 3 399 6.0E-106 T 22-04-2016 RPIC_RS18345 2934bc2394427cb534ebb0deae832b7f 400 SUPERFAMILY SSF88697 1 71 1.91E-16 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS01625 ab66d149ce29da874311f805e8ef2d41 138 Pfam PF06155 Protein of unknown function (DUF971) 14 98 3.0E-29 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 RPIC_RS01625 ab66d149ce29da874311f805e8ef2d41 138 PANTHER PTHR35303 1 123 1.4E-43 T 22-04-2016 RPIC_RS01625 ab66d149ce29da874311f805e8ef2d41 138 PANTHER PTHR35303:SF1 1 123 1.4E-43 T 22-04-2016 RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 PANTHER PTHR24220 18 258 3.7E-171 T 22-04-2016 RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 PANTHER PTHR24220:SF560 18 258 3.7E-171 T 22-04-2016 RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 SMART SM00382 41 251 7.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 SUPERFAMILY SSF52540 15 249 4.21E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 Pfam PF00005 ABC transporter 32 187 1.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 Gene3D G3DSA:3.40.50.300 11 254 7.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS09960 3937ea656604565cbe0a86e1311543be 263 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 17 263 1.0E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RPIC_RS01640 63c2355820a0480f157e1e563d0cb045 220 Pfam PF02036 SCP-2 sterol transfer family 24 117 2.8E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC_RS01640 63c2355820a0480f157e1e563d0cb045 220 PANTHER PTHR38693 5 211 2.7E-22 T 22-04-2016 RPIC_RS01640 63c2355820a0480f157e1e563d0cb045 220 PANTHER PTHR38693:SF1 5 211 2.7E-22 T 22-04-2016 RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 SUPERFAMILY SSF74863 31 148 2.62E-35 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 9 595 36.683 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 Gene3D G3DSA:3.40.30.10 483 595 4.2E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 Gene3D G3DSA:2.60.40.1250 29 151 1.6E-39 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 SUPERFAMILY SSF52833 490 592 7.28E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 PANTHER PTHR32234:SF0 34 599 5.6E-161 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 Pfam PF11412 Disulphide bond corrector protein DsbC 33 148 6.9E-32 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 185 363 3.1E-21 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 Pfam PF13899 Thioredoxin-like 487 568 1.1E-11 T 22-04-2016 RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 PANTHER PTHR32234 34 599 5.6E-161 T 22-04-2016 RPIC_RS16135 eabacd14d292b70e829336d41957f79f 605 ProSitePatterns PS00194 Thioredoxin family active site. 504 522 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS14810 7c0e59ac9d87f26c10d27ef667982fa1 312 SUPERFAMILY SSF51735 6 169 3.45E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14810 7c0e59ac9d87f26c10d27ef667982fa1 312 Gene3D G3DSA:3.40.50.720 7 185 4.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14810 7c0e59ac9d87f26c10d27ef667982fa1 312 PANTHER PTHR22604 10 308 2.2E-110 T 22-04-2016 RPIC_RS14810 7c0e59ac9d87f26c10d27ef667982fa1 312 PANTHER PTHR22604:SF131 10 308 2.2E-110 T 22-04-2016 RPIC_RS14810 7c0e59ac9d87f26c10d27ef667982fa1 312 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 118 5.5E-19 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 RPIC_RS14835 1b50271c37a774f468d19bbfce8c88d7 143 Gene3D G3DSA:3.10.450.30 49 142 7.1E-41 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RPIC_RS14835 1b50271c37a774f468d19bbfce8c88d7 143 SUPERFAMILY SSF53933 48 142 6.24E-36 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 RPIC_RS14835 1b50271c37a774f468d19bbfce8c88d7 143 Pfam PF00545 ribonuclease 57 140 7.6E-31 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 Gene3D G3DSA:2.40.50.140 1 72 1.7E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.985 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.0E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 SMART SM00316 2 72 0.0092 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.8E-26 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 PANTHER PTHR33370 1 72 2.5E-47 T 22-04-2016 RPIC_RS16175 b49af22c7174fd7c03e22dfd9ff2e186 72 SUPERFAMILY SSF50249 1 70 6.28E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS06595 5a0b894b47c5dbd8e20fdd9e28b4af2b 405 Gene3D G3DSA:1.20.1250.20 209 390 2.6E-19 T 22-04-2016 RPIC_RS06595 5a0b894b47c5dbd8e20fdd9e28b4af2b 405 Pfam PF07690 Major Facilitator Superfamily 39 356 6.3E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06595 5a0b894b47c5dbd8e20fdd9e28b4af2b 405 Gene3D G3DSA:1.20.1250.20 32 199 7.6E-21 T 22-04-2016 RPIC_RS06595 5a0b894b47c5dbd8e20fdd9e28b4af2b 405 SUPERFAMILY SSF103473 7 391 2.35E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06595 5a0b894b47c5dbd8e20fdd9e28b4af2b 405 PANTHER PTHR11360:SF115 6 403 3.7E-118 T 22-04-2016 RPIC_RS06595 5a0b894b47c5dbd8e20fdd9e28b4af2b 405 PANTHER PTHR11360 6 403 3.7E-118 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 953 4.4E-20 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PANTHER PTHR11946 885 952 0.0 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PANTHER PTHR11946 1 565 0.0 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PANTHER PTHR11946 603 863 0.0 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Gene3D G3DSA:1.10.730.10 626 823 1.2E-62 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Gene3D G3DSA:1.10.287.380 887 953 1.3E-6 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 TIGRFAM TIGR00422 valS: valine--tRNA ligase 9 935 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Gene3D G3DSA:3.90.740.10 200 348 3.2E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Gene3D G3DSA:3.40.50.620 10 199 2.7E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Gene3D G3DSA:3.40.50.620 604 625 2.7E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Gene3D G3DSA:3.40.50.620 352 566 2.7E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 1.52E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.52E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PRINTS PR00986 Valyl-tRNA synthetase signature 470 491 1.52E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 1.52E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PRINTS PR00986 Valyl-tRNA synthetase signature 241 258 1.52E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 626 2.1E-203 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 SUPERFAMILY SSF52374 8 198 9.69E-134 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 SUPERFAMILY SSF52374 604 636 9.69E-134 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 SUPERFAMILY SSF52374 352 566 9.69E-134 T 22-04-2016 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 954 15.64 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 SUPERFAMILY SSF47323 637 903 9.72E-62 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 Pfam PF08264 Anticodon-binding domain of tRNA 677 831 1.4E-40 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 SUPERFAMILY SSF46589 889 953 1.1E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PANTHER PTHR11946:SF5 885 952 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PANTHER PTHR11946:SF5 1 565 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 PANTHER PTHR11946:SF5 603 863 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 RPIC_RS12035 4d19414a2250e940ecf7bba4a969133e 958 SUPERFAMILY SSF50677 197 353 1.14E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 RPIC_RS07115 894808384df32d16346e200c4eae768c 300 SUPERFAMILY SSF51735 1 254 1.99E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07115 894808384df32d16346e200c4eae768c 300 Gene3D G3DSA:3.40.50.720 6 256 4.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 2.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 6.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 6.1E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PANTHER PTHR24322 161 195 4.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 PANTHER PTHR24322 11 145 4.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS07115 894808384df32d16346e200c4eae768c 300 Pfam PF00106 short chain dehydrogenase 8 206 3.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS15155 1bf2b05043bb8326e5f47f96c1696f78 67 PANTHER PTHR36150 1 56 5.0E-20 T 22-04-2016 RPIC_RS15155 1bf2b05043bb8326e5f47f96c1696f78 67 Pfam PF03884 Domain of unknown function (DUF329) 6 53 1.0E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RPIC_RS15155 1bf2b05043bb8326e5f47f96c1696f78 67 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 60 19.484 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 RPIC_RS15155 1bf2b05043bb8326e5f47f96c1696f78 67 PANTHER PTHR36150:SF1 1 56 5.0E-20 T 22-04-2016 RPIC_RS15155 1bf2b05043bb8326e5f47f96c1696f78 67 Gene3D G3DSA:3.30.50.10 3 57 1.2E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 RPIC_RS15155 1bf2b05043bb8326e5f47f96c1696f78 67 SUPERFAMILY SSF57716 3 61 1.43E-21 T 22-04-2016 RPIC_RS06710 9a2644209e585762635809623700776b 298 Pfam PF07728 AAA domain (dynein-related subfamily) 38 192 2.8E-11 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RPIC_RS06710 9a2644209e585762635809623700776b 298 SUPERFAMILY SSF52540 22 278 1.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06710 9a2644209e585762635809623700776b 298 Gene3D G3DSA:3.40.50.300 25 220 4.4E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06710 9a2644209e585762635809623700776b 298 PANTHER PTHR22908:SF67 16 291 5.8E-83 T 22-04-2016 RPIC_RS06710 9a2644209e585762635809623700776b 298 PANTHER PTHR22908 16 291 5.8E-83 T 22-04-2016 RPIC_RS06710 9a2644209e585762635809623700776b 298 SMART SM00382 34 201 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 118 131 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 53 181 3.8E-55 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 Gene3D G3DSA:3.40.50.720 199 432 3.3E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 PANTHER PTHR11606 48 431 7.6E-185 T 22-04-2016 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 358 369 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 110 124 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 1.1E-32 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 SMART SM00839 201 430 1.1E-106 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 Gene3D G3DSA:3.40.192.10 57 197 3.0E-58 T 22-04-2016 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 SUPERFAMILY SSF51735 199 432 7.3E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 PIRSF PIRSF000185 27 433 1.6E-164 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 430 1.6E-79 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 RPIC_RS01745 d2ee8a72137fd84287fa5033d3810c37 433 SUPERFAMILY SSF53223 19 201 8.32E-69 T 22-04-2016 RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 PANTHER PTHR30024 5 259 5.1E-45 T 22-04-2016 RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 35 339 4.0E-102 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 Gene3D G3DSA:3.40.190.10 115 238 3.9E-25 T 22-04-2016 RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 PANTHER PTHR30024:SF17 5 259 5.1E-45 T 22-04-2016 RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 SUPERFAMILY SSF53850 34 255 1.06E-39 T 22-04-2016 RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 Pfam PF09084 NMT1/THI5 like 59 247 9.7E-19 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC_RS14215 9d75007e48afa9dac84ddd123bc68454 354 SMART SM00062 34 252 5.1E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00458 Haem peroxidase superfamily signature 255 270 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00458 Haem peroxidase superfamily signature 314 329 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 6.3E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PANTHER PTHR30555 1 718 0.0 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 SUPERFAMILY SSF48113 23 425 4.42E-144 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Pfam PF00141 Peroxidase 76 391 1.8E-47 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Pfam PF00141 Peroxidase 398 691 5.7E-32 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 19 719 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.420.10 575 693 4.4E-42 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 SUPERFAMILY SSF48113 431 718 2.5E-104 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.520.10 235 247 1.5E-71 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.520.10 428 574 1.2E-53 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.520.10 48 201 1.5E-71 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.520.10 697 719 1.2E-53 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PANTHER PTHR30555:SF0 1 718 0.0 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Hamap MF_01961 Catalase-peroxidase [katG]. 2 719 40.226 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 255 265 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.420.10 248 270 3.9E-44 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 Gene3D G3DSA:1.10.420.10 306 403 3.9E-44 T 22-04-2016 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 1.9E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 475 501 1.9E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 263 286 1.9E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 1.9E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS14400 7c8f5de5d40016b0427cbbf587877f8c 721 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 1.9E-53 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 PRINTS PR00184 Neisseria sp. porin signature 59 84 5.8E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 PRINTS PR00184 Neisseria sp. porin signature 294 318 5.8E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 Gene3D G3DSA:2.40.160.10 21 368 1.7E-97 T 22-04-2016 IPR023614 Porin domain RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 SUPERFAMILY SSF56935 21 368 1.44E-86 T 22-04-2016 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 2.1E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 188 200 2.1E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 101 111 2.1E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 297 314 2.1E-6 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15845 c1494e200eb50a1402f6ee8213dc46ab 368 Pfam PF13609 Gram-negative porin 7 322 1.6E-51 T 22-04-2016 RPIC_RS10810 f575741655b86baf054006585d8580e9 203 SUPERFAMILY SSF55811 28 192 2.17E-45 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS10810 f575741655b86baf054006585d8580e9 203 Pfam PF00293 NUDIX domain 61 169 2.0E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS10810 f575741655b86baf054006585d8580e9 203 PANTHER PTHR11839 31 190 5.8E-49 T 22-04-2016 RPIC_RS10810 f575741655b86baf054006585d8580e9 203 Gene3D G3DSA:3.90.79.10 23 192 3.2E-52 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS10810 f575741655b86baf054006585d8580e9 203 PANTHER PTHR11839:SF9 31 190 5.8E-49 T 22-04-2016 RPIC_RS00545 f59ce158694dacdf19362560e81b3d77 309 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 22-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 RPIC_RS00545 f59ce158694dacdf19362560e81b3d77 309 Gene3D G3DSA:3.20.20.70 6 291 2.6E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS00545 f59ce158694dacdf19362560e81b3d77 309 PANTHER PTHR10277 2 296 1.5E-172 T 22-04-2016 RPIC_RS00545 f59ce158694dacdf19362560e81b3d77 309 PANTHER PTHR10277:SF40 2 296 1.5E-172 T 22-04-2016 RPIC_RS00545 f59ce158694dacdf19362560e81b3d77 309 SUPERFAMILY SSF51569 1 292 2.01E-70 T 22-04-2016 RPIC_RS00545 f59ce158694dacdf19362560e81b3d77 309 Pfam PF00682 HMGL-like 7 279 5.4E-52 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 SUPERFAMILY SSF52540 5 247 7.37E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 225 247 1.2E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 Pfam PF00005 ABC transporter 23 178 2.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 Gene3D G3DSA:3.40.50.300 3 246 2.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 PANTHER PTHR24220 8 247 2.6E-120 T 22-04-2016 RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 PANTHER PTHR24220:SF400 8 247 2.6E-120 T 22-04-2016 RPIC_RS17545 16592b4bdefff9120a162134ada3b119 256 SMART SM00382 31 225 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS07620 eee830f9a2a6e6e1407d441158023481 432 Pfam PF04917 Bacterial shufflon protein, N-terminal constant region 9 343 1.2E-26 T 22-04-2016 IPR007001 Bacterial shufflon protein, N-terminal RPIC_RS01945 6cba448914acf54b8a0f704e383883aa 135 PANTHER PTHR10374 1 130 7.3E-62 T 22-04-2016 RPIC_RS01945 6cba448914acf54b8a0f704e383883aa 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 7.3E-26 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS01945 6cba448914acf54b8a0f704e383883aa 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 131 8.3E-67 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS01945 6cba448914acf54b8a0f704e383883aa 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 RPIC_RS01945 6cba448914acf54b8a0f704e383883aa 135 Gene3D G3DSA:3.10.180.10 1 126 5.4E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS01945 6cba448914acf54b8a0f704e383883aa 135 SUPERFAMILY SSF54593 1 127 5.5E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS07435 d8e18747f58f5d0aff5f33b55823a1cb 799 Gene3D G3DSA:3.40.1350.10 678 795 6.5E-24 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RPIC_RS07435 d8e18747f58f5d0aff5f33b55823a1cb 799 SUPERFAMILY SSF52980 681 795 1.39E-20 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC_RS07435 d8e18747f58f5d0aff5f33b55823a1cb 799 Pfam PF04471 Restriction endonuclease 681 794 6.3E-21 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RPIC_RS07435 d8e18747f58f5d0aff5f33b55823a1cb 799 PANTHER PTHR30015:SF4 681 794 6.5E-18 T 22-04-2016 RPIC_RS07435 d8e18747f58f5d0aff5f33b55823a1cb 799 PANTHER PTHR30015 681 794 6.5E-18 T 22-04-2016 RPIC_RS10985 7d3087834c2259eb1783af3af10fddd6 338 PANTHER PTHR37946 95 266 2.0E-14 T 22-04-2016 RPIC_RS10985 7d3087834c2259eb1783af3af10fddd6 338 Gene3D G3DSA:3.40.50.1820 125 329 1.7E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10985 7d3087834c2259eb1783af3af10fddd6 338 SUPERFAMILY SSF53474 138 323 1.12E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10985 7d3087834c2259eb1783af3af10fddd6 338 Pfam PF12146 Serine aminopeptidase, S33 181 260 3.6E-7 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RPIC_RS04215 43829d05c7f5dfd300786f8f9d182868 169 Gene3D G3DSA:1.20.120.450 2 167 1.7E-73 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase RPIC_RS04215 43829d05c7f5dfd300786f8f9d182868 169 PANTHER PTHR36922 1 167 4.7E-75 T 22-04-2016 RPIC_RS04215 43829d05c7f5dfd300786f8f9d182868 169 Pfam PF09351 Domain of unknown function (DUF1993) 6 166 2.3E-63 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 RPIC_RS04215 43829d05c7f5dfd300786f8f9d182868 169 SUPERFAMILY SSF109854 5 168 5.04E-64 T 22-04-2016 RPIC_RS04215 43829d05c7f5dfd300786f8f9d182868 169 PANTHER PTHR36922:SF1 1 167 4.7E-75 T 22-04-2016 RPIC_RS11170 9b75390dfd2d47fcef147c1635b7bfde 344 PANTHER PTHR11731 70 269 7.8E-15 T 22-04-2016 RPIC_RS11170 9b75390dfd2d47fcef147c1635b7bfde 344 Gene3D G3DSA:3.40.50.1820 66 336 1.8E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS11170 9b75390dfd2d47fcef147c1635b7bfde 344 Pfam PF10503 Esterase PHB depolymerase 71 280 1.4E-68 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 RPIC_RS11170 9b75390dfd2d47fcef147c1635b7bfde 344 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 72 265 6.7E-39 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 RPIC_RS11170 9b75390dfd2d47fcef147c1635b7bfde 344 SUPERFAMILY SSF53474 60 278 1.77E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17495 30bc10680a2bee18c167983e7b7210e3 318 Gene3D G3DSA:3.40.50.720 8 311 5.3E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17495 30bc10680a2bee18c167983e7b7210e3 318 Pfam PF13460 NAD(P)H-binding 12 165 7.5E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17495 30bc10680a2bee18c167983e7b7210e3 318 SUPERFAMILY SSF51735 7 314 8.92E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17495 30bc10680a2bee18c167983e7b7210e3 318 PANTHER PTHR10366 275 315 5.0E-20 T 22-04-2016 RPIC_RS17495 30bc10680a2bee18c167983e7b7210e3 318 PANTHER PTHR10366 7 259 5.0E-20 T 22-04-2016 RPIC_RS05260 6f21912a910614e45df8425128c8bb9f 428 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 23 412 1.8E-116 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC_RS05260 6f21912a910614e45df8425128c8bb9f 428 Pfam PF04551 GcpE protein 34 413 7.9E-113 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC_RS05260 6f21912a910614e45df8425128c8bb9f 428 PIRSF PIRSF004640 15 423 1.4E-128 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC_RS05260 6f21912a910614e45df8425128c8bb9f 428 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 21 417 27.925 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 RPIC_RS05260 6f21912a910614e45df8425128c8bb9f 428 PANTHER PTHR30454 1 417 6.6E-137 T 22-04-2016 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 Gene3D G3DSA:1.10.287.950 496 714 1.0E-49 T 22-04-2016 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 638 1.0E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 510 539 1.0E-6 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 SMART SM00283 482 743 4.5E-80 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 537 742 9.6E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 SUPERFAMILY SSF58104 443 744 7.67E-65 T 22-04-2016 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 PANTHER PTHR32089 450 745 4.9E-91 T 22-04-2016 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 PANTHER PTHR32089:SF43 450 745 4.9E-91 T 22-04-2016 RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 97 199 1.2E-17 T 22-04-2016 IPR029095 NarX-like, N-terminal RPIC_RS02995 75bd5273151fea2a8eda3e56ad042aa3 745 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 230 321 9.8E-6 T 22-04-2016 IPR029095 NarX-like, N-terminal RPIC_RS03550 460b63b5fc9c2b69a4a737494cdac338 221 Gene3D G3DSA:3.40.30.10 1 64 7.4E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03550 460b63b5fc9c2b69a4a737494cdac338 221 Gene3D G3DSA:1.10.472.60 65 177 1.1E-41 T 22-04-2016 IPR023169 UPF0413, central domain RPIC_RS03550 460b63b5fc9c2b69a4a737494cdac338 221 PANTHER PTHR13887 53 189 8.4E-12 T 22-04-2016 RPIC_RS03550 460b63b5fc9c2b69a4a737494cdac338 221 SUPERFAMILY SSF52833 1 216 4.6E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS03550 460b63b5fc9c2b69a4a737494cdac338 221 Pfam PF01323 DSBA-like thioredoxin domain 5 187 7.7E-15 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 Gene3D G3DSA:3.90.79.10 25 148 4.1E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 PRINTS PR00502 NUDIX hydrolase family signature 68 83 3.2E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 PRINTS PR00502 NUDIX hydrolase family signature 54 68 3.2E-7 T 22-04-2016 IPR020476 NUDIX hydrolase RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 Pfam PF00293 NUDIX domain 27 121 2.1E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 PANTHER PTHR22769:SF35 22 128 5.3E-24 T 22-04-2016 RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 PANTHER PTHR22769 22 128 5.3E-24 T 22-04-2016 RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 SUPERFAMILY SSF55811 15 128 4.47E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS15160 bcfa67e9f29bdbc15812a43ffc2cbb24 153 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC_RS16870 3ca626b95ea7f6fb59e3ba2441b9032d 209 PANTHER PTHR40202 24 198 2.4E-22 T 22-04-2016 RPIC_RS16870 3ca626b95ea7f6fb59e3ba2441b9032d 209 SUPERFAMILY SSF109604 12 137 1.51E-28 T 22-04-2016 RPIC_RS16870 3ca626b95ea7f6fb59e3ba2441b9032d 209 PANTHER PTHR40202:SF1 24 198 2.4E-22 T 22-04-2016 RPIC_RS16870 3ca626b95ea7f6fb59e3ba2441b9032d 209 Pfam PF01966 HD domain 60 125 1.7E-5 T 22-04-2016 IPR006674 HD domain RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 SMART SM00825 Beta-ketoacyl synthase 32 400 2.7E-10 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 Gene3D G3DSA:3.40.47.10 3 239 1.1E-29 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 95 238 2.9E-25 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 250 356 4.7E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 SUPERFAMILY SSF53901 2 238 4.08E-40 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 PANTHER PTHR11712 97 398 1.4E-72 T 22-04-2016 RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 Gene3D G3DSA:3.40.47.10 255 398 9.8E-53 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS01475 d2b614f5dfbe1ad993a47d3407c42a9d 405 SUPERFAMILY SSF53901 209 399 1.52E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS10995 17baa823b87e9a69c435fa13ab7aa7c5 350 Pfam PF13692 Glycosyl transferases group 1 180 292 3.1E-16 T 22-04-2016 RPIC_RS10995 17baa823b87e9a69c435fa13ab7aa7c5 350 SUPERFAMILY SSF53756 2 329 5.76E-61 T 22-04-2016 RPIC_RS10995 17baa823b87e9a69c435fa13ab7aa7c5 350 PANTHER PTHR12526 2 324 4.5E-71 T 22-04-2016 RPIC_RS10995 17baa823b87e9a69c435fa13ab7aa7c5 350 Pfam PF13439 Glycosyltransferase Family 4 14 165 5.7E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC_RS10995 17baa823b87e9a69c435fa13ab7aa7c5 350 PANTHER PTHR12526:SF363 2 324 4.5E-71 T 22-04-2016 RPIC_RS10995 17baa823b87e9a69c435fa13ab7aa7c5 350 Gene3D G3DSA:3.40.50.2000 174 285 3.9E-15 T 22-04-2016 RPIC_RS10645 adec0e741bf9b6226e92d19b32b0bd68 390 Gene3D G3DSA:3.90.1150.10 279 389 3.1E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS10645 adec0e741bf9b6226e92d19b32b0bd68 390 Pfam PF00155 Aminotransferase class I and II 37 387 2.8E-65 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS10645 adec0e741bf9b6226e92d19b32b0bd68 390 SUPERFAMILY SSF53383 15 389 4.98E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS10645 adec0e741bf9b6226e92d19b32b0bd68 390 PANTHER PTHR11751 16 390 1.3E-138 T 22-04-2016 RPIC_RS10645 adec0e741bf9b6226e92d19b32b0bd68 390 Gene3D G3DSA:3.40.640.10 50 278 2.1E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS10645 adec0e741bf9b6226e92d19b32b0bd68 390 PANTHER PTHR11751:SF301 16 390 1.3E-138 T 22-04-2016 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 PANTHER PTHR23416:SF8 1 263 3.0E-116 T 22-04-2016 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 Gene3D G3DSA:2.160.10.10 4 187 2.2E-47 T 22-04-2016 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 152 180 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 SUPERFAMILY SSF51161 5 248 2.27E-71 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS06410 018bc7faa179df8849c717098e469168 271 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 271 44.778 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 270 3.6E-99 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 Gene3D G3DSA:1.20.1180.10 200 271 1.6E-24 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 270 5.5E-27 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 PANTHER PTHR23416 1 263 3.0E-116 T 22-04-2016 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 PIRSF PIRSF000456 3 271 3.0E-99 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 RPIC_RS06410 018bc7faa179df8849c717098e469168 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 142 9.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS06410 018bc7faa179df8849c717098e469168 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 21 51 6.7E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 PANTHER PTHR11695 18 326 7.2E-135 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 SMART SM00829 13 324 7.4E-41 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 88 3.7E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 SUPERFAMILY SSF50129 3 146 2.99E-39 T 22-04-2016 IPR011032 GroES-like RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 PANTHER PTHR11695:SF605 18 326 7.2E-135 T 22-04-2016 RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 142 163 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 Gene3D G3DSA:3.40.50.720 149 257 3.3E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 Pfam PF00107 Zinc-binding dehydrogenase 153 258 2.5E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 SUPERFAMILY SSF51735 114 274 3.12E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11730 aed64608fe9c33752479ac164b4f2896 326 Gene3D G3DSA:3.90.180.10 3 148 1.4E-46 T 22-04-2016 IPR011032 GroES-like RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 PANTHER PTHR11014:SF80 334 399 3.2E-103 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 PANTHER PTHR11014:SF80 1 315 3.2E-103 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 SUPERFAMILY SSF53187 316 393 6.29E-58 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 SUPERFAMILY SSF53187 5 185 6.29E-58 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 Pfam PF01546 Peptidase family M20/M25/M40 79 392 1.2E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 SUPERFAMILY SSF55031 186 292 2.99E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 Gene3D G3DSA:3.40.630.10 13 194 1.7E-61 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 Gene3D G3DSA:3.40.630.10 336 393 1.7E-61 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 Gene3D G3DSA:3.30.70.360 195 291 1.9E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 Pfam PF07687 Peptidase dimerisation domain 182 291 2.8E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 20 390 4.0E-113 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 PANTHER PTHR11014 334 399 3.2E-103 T 22-04-2016 RPIC_RS15340 157f0fc550bfae691327a8c9547bf506 400 PANTHER PTHR11014 1 315 3.2E-103 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.1E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.1E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.1E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.1E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.1E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.1E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 Gene3D G3DSA:1.10.3850.10 815 1038 8.7E-51 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 Gene3D G3DSA:1.10.3850.10 276 507 5.7E-66 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82693 271 328 5.49E-22 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82693 137 184 5.49E-22 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 Gene3D G3DSA:3.30.2090.10 724 807 1.8E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 Gene3D G3DSA:3.30.2090.10 185 269 4.4E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82714 185 269 6.41E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 Gene3D G3DSA:3.30.70.1430 46 141 5.3E-23 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82866 294 505 1.09E-38 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82714 723 806 1.96E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82693 46 127 2.14E-19 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PANTHER PTHR32063:SF19 2 1041 0.0 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 Pfam PF00873 AcrB/AcrD/AcrF family 8 1036 4.9E-239 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 PANTHER PTHR32063 2 1041 0.0 T 22-04-2016 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RPIC_RS08875 cd1280e0caa37d60b8d7a8b56b000e82 1056 SUPERFAMILY SSF82866 805 1040 6.67E-48 T 22-04-2016 RPIC_RS08815 3f047262ba0f8ef1e21ab976216344e1 230 Gene3D G3DSA:3.40.30.10 70 200 4.1E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08815 3f047262ba0f8ef1e21ab976216344e1 230 Pfam PF00578 AhpC/TSA family 74 199 7.4E-15 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS08815 3f047262ba0f8ef1e21ab976216344e1 230 SUPERFAMILY SSF52833 73 224 2.24E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS12320 50e8efdf4226dc5206a645ccb56eee16 258 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 36 252 1.0E-62 T 22-04-2016 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier RPIC_RS12320 50e8efdf4226dc5206a645ccb56eee16 258 SUPERFAMILY SSF81296 173 256 3.22E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS12320 50e8efdf4226dc5206a645ccb56eee16 258 Pfam PF13501 Sulfur oxidation protein SoxY 41 145 7.1E-26 T 22-04-2016 IPR032711 Ig-like SoxY domain RPIC_RS12320 50e8efdf4226dc5206a645ccb56eee16 258 Pfam PF08770 Sulphur oxidation protein SoxZ 177 256 2.5E-6 T 22-04-2016 IPR014880 Sulphur oxidation protein SoxZ RPIC_RS12320 50e8efdf4226dc5206a645ccb56eee16 258 Gene3D G3DSA:2.60.40.10 175 256 1.6E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold RPIC_RS00895 1c708c5c43e784713c177dd55c1c3183 109 SUPERFAMILY SSF52833 5 103 3.13E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00895 1c708c5c43e784713c177dd55c1c3183 109 PANTHER PTHR11780:SF12 6 105 1.9E-29 T 22-04-2016 RPIC_RS00895 1c708c5c43e784713c177dd55c1c3183 109 Gene3D G3DSA:3.40.30.10 5 106 3.6E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00895 1c708c5c43e784713c177dd55c1c3183 109 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 90 1.3E-5 T 22-04-2016 RPIC_RS00895 1c708c5c43e784713c177dd55c1c3183 109 PANTHER PTHR11780 6 105 1.9E-29 T 22-04-2016 RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 PANTHER PTHR18966:SF191 28 266 5.5E-42 T 22-04-2016 RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 SMART SM00079 50 269 0.0038 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 SUPERFAMILY SSF53850 23 269 3.0E-54 T 22-04-2016 RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 SMART SM00062 50 270 2.4E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 268 3.8E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 Gene3D G3DSA:3.40.190.10 156 214 7.8E-12 T 22-04-2016 RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 Gene3D G3DSA:3.40.190.10 30 155 8.8E-39 T 22-04-2016 RPIC_RS00070 e7b622f27de5ea17463df0e7841da6e2 275 PANTHER PTHR18966 28 266 5.5E-42 T 22-04-2016 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 Pfam PF03054 tRNA methyl transferase 4 357 1.7E-132 T 22-04-2016 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 1.1E-131 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 Gene3D G3DSA:2.30.30.280 210 278 3.5E-32 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 38.732 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 Gene3D G3DSA:3.40.50.620 2 208 3.0E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 PANTHER PTHR11933 1 360 1.3E-182 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 Gene3D G3DSA:2.40.30.10 280 362 2.0E-29 T 22-04-2016 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 PANTHER PTHR11933:SF10 1 360 1.3E-182 T 22-04-2016 RPIC_RS14610 13c4d2ab13a1e8badf853fbe38894516 370 SUPERFAMILY SSF52402 2 241 3.31E-56 T 22-04-2016 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 Pfam PF00483 Nucleotidyl transferase 5 287 3.8E-64 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 PANTHER PTHR12526:SF357 154 292 9.2E-112 T 22-04-2016 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 PANTHER PTHR12526:SF357 356 473 9.2E-112 T 22-04-2016 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 Gene3D G3DSA:2.60.120.10 361 472 3.5E-47 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 472 1.1E-211 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 Pfam PF01050 Mannose-6-phosphate isomerase 318 468 5.6E-74 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 PANTHER PTHR12526 154 292 9.2E-112 T 22-04-2016 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 PANTHER PTHR12526 356 473 9.2E-112 T 22-04-2016 RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 Gene3D G3DSA:3.90.550.10 1 274 2.6E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 SUPERFAMILY SSF53448 1 283 2.82E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS05775 c378a97f399d301285760c965a13cf20 474 SUPERFAMILY SSF51182 188 472 1.78E-83 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS00695 1c8551c0809ff3f45dea472475cdfbd8 146 Pfam PF00072 Response regulator receiver domain 15 127 1.7E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00695 1c8551c0809ff3f45dea472475cdfbd8 146 Gene3D G3DSA:3.40.50.2300 9 133 6.1E-23 T 22-04-2016 RPIC_RS00695 1c8551c0809ff3f45dea472475cdfbd8 146 SMART SM00448 13 127 6.1E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS00695 1c8551c0809ff3f45dea472475cdfbd8 146 PANTHER PTHR26402 13 128 5.7E-23 T 22-04-2016 RPIC_RS00695 1c8551c0809ff3f45dea472475cdfbd8 146 SUPERFAMILY SSF52172 10 138 1.08E-22 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS11025 89ab14b088644ce634a9c8f8a9d1b507 134 SUPERFAMILY SSF46458 13 132 3.29E-35 T 22-04-2016 IPR009050 Globin-like RPIC_RS11025 89ab14b088644ce634a9c8f8a9d1b507 134 Gene3D G3DSA:1.10.490.10 12 132 4.3E-42 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 RPIC_RS11025 89ab14b088644ce634a9c8f8a9d1b507 134 PANTHER PTHR10681 12 131 1.3E-13 T 22-04-2016 RPIC_RS11025 89ab14b088644ce634a9c8f8a9d1b507 134 Pfam PF01152 Bacterial-like globin 12 127 4.0E-47 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 RPIC_RS17510 1bd8b60dff36965ccaca195c6b368f63 252 Pfam PF01925 Sulfite exporter TauE/SafE 6 244 6.0E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS17510 1bd8b60dff36965ccaca195c6b368f63 252 PANTHER PTHR30269:SF0 1 248 3.1E-72 T 22-04-2016 RPIC_RS17510 1bd8b60dff36965ccaca195c6b368f63 252 PANTHER PTHR30269 1 248 3.1E-72 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS03150 85e789bef043f677780f760fc0d1d0a5 110 Gene3D G3DSA:3.40.250.10 2 108 4.3E-26 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS03150 85e789bef043f677780f760fc0d1d0a5 110 SMART SM00450 7 105 5.1E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS03150 85e789bef043f677780f760fc0d1d0a5 110 Pfam PF00581 Rhodanese-like domain 10 100 3.3E-13 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS03150 85e789bef043f677780f760fc0d1d0a5 110 SUPERFAMILY SSF52821 3 106 3.14E-25 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 Pfam PF01957 NfeD-like C-terminal, partner-binding 314 457 9.1E-41 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 PANTHER PTHR33507 13 459 4.3E-142 T 22-04-2016 RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 SUPERFAMILY SSF141322 385 458 1.57E-11 T 22-04-2016 RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 PANTHER PTHR33507:SF1 13 459 4.3E-142 T 22-04-2016 RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 Gene3D G3DSA:2.40.50.140 396 457 1.1E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 SUPERFAMILY SSF52096 28 213 2.78E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 Gene3D G3DSA:3.90.226.10 189 223 9.5E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS03675 47ba743c6e915da65d25fdea2a3083d4 464 Gene3D G3DSA:3.90.226.10 32 132 9.5E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS09505 9d7f18700e7a31f31067189908f04c61 241 PANTHER PTHR30296 2 238 7.8E-92 T 22-04-2016 RPIC_RS09505 9d7f18700e7a31f31067189908f04c61 241 Pfam PF02754 Cysteine-rich domain 3 84 5.6E-15 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC_RS09505 9d7f18700e7a31f31067189908f04c61 241 Pfam PF02754 Cysteine-rich domain 132 216 2.1E-14 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC_RS09505 9d7f18700e7a31f31067189908f04c61 241 PANTHER PTHR30296:SF0 2 238 7.8E-92 T 22-04-2016 RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 SUPERFAMILY SSF46785 112 192 2.93E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 PANTHER PTHR34298 86 310 1.5E-60 T 22-04-2016 RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 Pfam PF04079 Segregation and condensation complex subunit ScpB 122 279 5.1E-48 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 Gene3D G3DSA:1.10.10.10 113 192 1.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 SUPERFAMILY SSF46785 195 270 7.54E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 123 283 1.1E-32 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 Gene3D G3DSA:1.10.10.10 194 270 5.5E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05535 3ceec663c7c0c0baf841962f23086359 392 PANTHER PTHR34298:SF2 86 310 1.5E-60 T 22-04-2016 RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 PANTHER PTHR37423 13 270 3.2E-84 T 22-04-2016 RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 20 265 47.029 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 26 269 6.6E-90 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 SUPERFAMILY SSF48452 57 128 7.93E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 SUPERFAMILY SSF48452 201 248 7.93E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 Pfam PF13525 Outer membrane lipoprotein 54 258 3.9E-66 T 22-04-2016 RPIC_RS09420 2bfc24604753956a5ce99396b952b815 285 Gene3D G3DSA:1.25.40.10 54 232 9.6E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS17860 28d8bbe829de45513ba8baecc6c14968 375 SUPERFAMILY SSF56935 26 375 1.28E-53 T 22-04-2016 RPIC_RS17860 28d8bbe829de45513ba8baecc6c14968 375 Pfam PF13609 Gram-negative porin 12 351 9.2E-47 T 22-04-2016 RPIC_RS17860 28d8bbe829de45513ba8baecc6c14968 375 Gene3D G3DSA:2.40.160.10 26 375 2.2E-66 T 22-04-2016 IPR023614 Porin domain RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 PANTHER PTHR30055 8 171 2.1E-28 T 22-04-2016 RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 SUPERFAMILY SSF48498 85 216 1.56E-36 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 6.4E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 SUPERFAMILY SSF46689 6 77 1.85E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 PANTHER PTHR30055:SF73 8 171 2.1E-28 T 22-04-2016 RPIC_RS02055 bf97b1802000a26c568960b5979e4b1e 352 Gene3D G3DSA:1.10.357.10 3 212 7.7E-36 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS17345 1eb45462a61d4a350431d5c84bb237cd 115 Gene3D G3DSA:3.90.1590.10 1 101 4.7E-24 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 RPIC_RS17345 1eb45462a61d4a350431d5c84bb237cd 115 PANTHER PTHR28620:SF2 1 114 1.3E-36 T 22-04-2016 RPIC_RS17345 1eb45462a61d4a350431d5c84bb237cd 115 PANTHER PTHR28620 1 114 1.3E-36 T 22-04-2016 RPIC_RS17345 1eb45462a61d4a350431d5c84bb237cd 115 SUPERFAMILY SSF51316 1 112 7.74E-33 T 22-04-2016 IPR011057 Mss4-like RPIC_RS17345 1eb45462a61d4a350431d5c84bb237cd 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 104 8.9E-9 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Gene3D G3DSA:3.40.50.980 215 389 1.4E-42 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 SUPERFAMILY SSF56801 20 566 1.7E-151 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Gene3D G3DSA:3.40.50.980 184 214 1.8E-39 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Gene3D G3DSA:3.40.50.980 24 151 1.8E-39 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Pfam PF00501 AMP-binding enzyme 30 471 7.3E-108 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Gene3D G3DSA:2.30.38.10 390 462 7.4E-30 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 PANTHER PTHR24096 175 564 1.0E-173 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 PANTHER PTHR24096 16 159 1.0E-173 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Gene3D G3DSA:3.30.300.30 468 567 2.0E-28 T 22-04-2016 RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS15300 f84e766c4eefc6abeda0070cff6b6a8e 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 6.5E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS11270 f76631356150bdfa29b9c273113e0795 647 SUPERFAMILY SSF51126 192 476 3.62E-19 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor RPIC_RS11270 f76631356150bdfa29b9c273113e0795 647 Pfam PF12708 Pectate lyase superfamily protein 193 383 1.3E-8 T 22-04-2016 IPR024535 Pectate lyase superfamily protein RPIC_RS11270 f76631356150bdfa29b9c273113e0795 647 Gene3D G3DSA:2.160.20.10 192 489 3.2E-13 T 22-04-2016 IPR012334 Pectin lyase fold RPIC_RS09260 26732d311cd321edb8afbd11246c23f5 186 SMART SM00900 98 179 9.2E-9 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RPIC_RS09260 26732d311cd321edb8afbd11246c23f5 186 Pfam PF04205 FMN-binding domain 103 175 1.8E-8 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 RPIC_RS14700 8c917262e545248e517ab6b67d1562e2 218 Pfam PF04355 SmpA / OmlA family 60 130 8.9E-27 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 RPIC_RS14700 8c917262e545248e517ab6b67d1562e2 218 PANTHER PTHR37482 16 182 7.9E-31 T 22-04-2016 RPIC_RS14700 8c917262e545248e517ab6b67d1562e2 218 PANTHER PTHR37482:SF1 16 182 7.9E-31 T 22-04-2016 RPIC_RS14700 8c917262e545248e517ab6b67d1562e2 218 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 22 143 28.03 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 Pfam PF00366 Ribosomal protein S17 14 80 4.4E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 Gene3D G3DSA:2.40.50.140 9 86 6.7E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 PANTHER PTHR10744 10 87 1.1E-38 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 SUPERFAMILY SSF50249 9 87 9.42E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 5.1E-36 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 85 24.943 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 6.0E-33 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 ProSitePatterns PS00056 Ribosomal protein S17 signature. 60 72 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 PRINTS PR00973 Ribosomal protein S17 family signature 28 51 2.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 PRINTS PR00973 Ribosomal protein S17 family signature 60 70 2.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16235 6e5e9cb868317d88c10a595139b93672 89 PRINTS PR00973 Ribosomal protein S17 family signature 70 77 2.4E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS06730 c0b0045817b2fd8a8d68770e3a5fdd43 159 PANTHER PTHR37952:SF2 9 156 1.3E-58 T 22-04-2016 RPIC_RS06730 c0b0045817b2fd8a8d68770e3a5fdd43 159 Pfam PF05981 CreA protein 27 151 2.5E-52 T 22-04-2016 IPR010292 Uncharacterised protein family CreA RPIC_RS06730 c0b0045817b2fd8a8d68770e3a5fdd43 159 PIRSF PIRSF003174 2 159 2.3E-63 T 22-04-2016 IPR010292 Uncharacterised protein family CreA RPIC_RS06730 c0b0045817b2fd8a8d68770e3a5fdd43 159 PANTHER PTHR37952 9 156 1.3E-58 T 22-04-2016 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 SUPERFAMILY SSF46785 10 122 1.33E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 Gene3D G3DSA:1.10.10.10 13 94 4.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 Gene3D G3DSA:3.40.190.10 100 188 2.3E-18 T 22-04-2016 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 1.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 Pfam PF03466 LysR substrate binding domain 100 306 9.3E-32 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 PANTHER PTHR30126:SF3 11 312 2.5E-90 T 22-04-2016 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 SUPERFAMILY SSF53850 102 307 3.44E-35 T 22-04-2016 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 PANTHER PTHR30126 11 312 2.5E-90 T 22-04-2016 RPIC_RS14795 4a5a6becafa60852dd44178027b7c81c 314 Gene3D G3DSA:3.40.190.10 189 275 6.0E-12 T 22-04-2016 RPIC_RS10045 93f9df34af8c59db8691d13e8a44f0af 262 Pfam PF08241 Methyltransferase domain 72 120 3.9E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC_RS10045 93f9df34af8c59db8691d13e8a44f0af 262 PANTHER PTHR10108:SF836 78 168 2.7E-22 T 22-04-2016 RPIC_RS10045 93f9df34af8c59db8691d13e8a44f0af 262 SUPERFAMILY SSF53335 73 212 1.03E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS10045 93f9df34af8c59db8691d13e8a44f0af 262 Gene3D G3DSA:3.40.50.150 76 213 1.5E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS10045 93f9df34af8c59db8691d13e8a44f0af 262 PANTHER PTHR10108 78 168 2.7E-22 T 22-04-2016 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 Pfam PF03466 LysR substrate binding domain 95 296 7.1E-23 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 Gene3D G3DSA:3.40.190.10 92 189 1.6E-14 T 22-04-2016 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 SUPERFAMILY SSF46785 1 82 1.09E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 Gene3D G3DSA:1.10.10.10 1 83 2.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 PANTHER PTHR30419 1 295 5.5E-52 T 22-04-2016 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 SUPERFAMILY SSF53850 94 293 3.26E-28 T 22-04-2016 RPIC_RS07085 bc0881439eff15902a9fc54714a1fc24 301 PANTHER PTHR30419:SF7 1 295 5.5E-52 T 22-04-2016 RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 Gene3D G3DSA:3.40.190.10 118 202 3.0E-12 T 22-04-2016 RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 248 5.9E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 SUPERFAMILY SSF53850 1 248 1.09E-49 T 22-04-2016 RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 PANTHER PTHR18966:SF191 28 247 8.9E-24 T 22-04-2016 RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 SMART SM00062 28 251 1.3E-40 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 PANTHER PTHR18966 28 247 8.9E-24 T 22-04-2016 RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 Gene3D G3DSA:3.40.190.10 210 248 1.4E-30 T 22-04-2016 RPIC_RS04195 c3c486c28730a9ee879b3c1148c84ec5 251 Gene3D G3DSA:3.40.190.10 26 115 1.4E-30 T 22-04-2016 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 PANTHER PTHR11751:SF347 21 370 6.5E-101 T 22-04-2016 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 364 3.0E-105 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 224 233 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 SUPERFAMILY SSF53383 15 367 6.25E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 Gene3D G3DSA:3.40.640.10 49 266 2.2E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 PANTHER PTHR11751 21 370 6.5E-101 T 22-04-2016 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 Pfam PF00155 Aminotransferase class I and II 36 356 4.7E-55 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 5 367 61.492 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 RPIC_RS03795 12605a8ee26a13dc32619b07dc870148 374 Gene3D G3DSA:3.90.1150.10 267 367 6.2E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS01790 89666c69c80624cb9d4558f12df15ce6 148 Gene3D G3DSA:2.20.25.10 1 36 1.7E-17 T 22-04-2016 RPIC_RS01790 89666c69c80624cb9d4558f12df15ce6 148 SUPERFAMILY SSF82784 1 138 1.06E-39 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC_RS01790 89666c69c80624cb9d4558f12df15ce6 148 Gene3D G3DSA:3.30.300.20 41 138 9.2E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS01790 89666c69c80624cb9d4558f12df15ce6 148 Pfam PF02566 OsmC-like protein 36 133 6.7E-17 T 22-04-2016 IPR003718 OsmC/Ohr family RPIC_RS01790 89666c69c80624cb9d4558f12df15ce6 148 PANTHER PTHR34352 1 141 4.8E-42 T 22-04-2016 RPIC_RS00470 a221df9161107ace77ca3ba0328ff6fa 227 PANTHER PTHR41536:SF1 2 227 2.1E-114 T 22-04-2016 RPIC_RS00470 a221df9161107ace77ca3ba0328ff6fa 227 PANTHER PTHR41536 2 227 2.1E-114 T 22-04-2016 RPIC_RS00470 a221df9161107ace77ca3ba0328ff6fa 227 Gene3D G3DSA:2.60.120.620 135 169 4.6E-4 T 22-04-2016 RPIC_RS00470 a221df9161107ace77ca3ba0328ff6fa 227 SMART SM00702 1 177 3.5E-20 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RPIC_RS00470 a221df9161107ace77ca3ba0328ff6fa 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 5.9E-14 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RPIC_RS00470 a221df9161107ace77ca3ba0328ff6fa 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 45.638 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 RPIC_RS12610 87bea2f9ecd81c9e1c155d4b2b958634 208 Gene3D G3DSA:3.40.50.150 3 137 1.4E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS12610 87bea2f9ecd81c9e1c155d4b2b958634 208 Pfam PF13649 Methyltransferase domain 41 130 1.4E-14 T 22-04-2016 RPIC_RS12610 87bea2f9ecd81c9e1c155d4b2b958634 208 PANTHER PTHR10108:SF779 1 138 1.8E-15 T 22-04-2016 RPIC_RS12610 87bea2f9ecd81c9e1c155d4b2b958634 208 SUPERFAMILY SSF53335 1 159 4.97E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS12610 87bea2f9ecd81c9e1c155d4b2b958634 208 PANTHER PTHR10108 1 138 1.8E-15 T 22-04-2016 RPIC_RS06995 1df0aa0fd36b6a0b0441bbadce5edb60 84 Gene3D G3DSA:3.40.50.360 2 76 2.3E-9 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS06995 1df0aa0fd36b6a0b0441bbadce5edb60 84 SUPERFAMILY SSF52218 2 76 7.67E-5 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS06995 1df0aa0fd36b6a0b0441bbadce5edb60 84 Pfam PF02525 Flavodoxin-like fold 2 71 3.2E-5 T 22-04-2016 IPR003680 Flavodoxin-like fold RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 Gene3D G3DSA:3.40.50.10300 185 397 1.4E-77 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 SUPERFAMILY SSF102645 173 396 1.7E-70 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 SUPERFAMILY SSF52507 3 180 1.19E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 Pfam PF02441 Flavoprotein 6 134 7.7E-35 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 PANTHER PTHR14359 1 396 7.5E-161 T 22-04-2016 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 392 3.8E-127 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 Gene3D G3DSA:3.40.50.1950 2 184 1.0E-65 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 PANTHER PTHR14359:SF20 1 396 7.5E-161 T 22-04-2016 RPIC_RS13450 0e04123220814a7e452ec6f21e1b5427 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 367 2.2E-63 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 RPIC_RS02390 93afcbac9fab898de4987b87191ba19a 65 Gene3D G3DSA:2.60.260.40 5 63 4.1E-20 T 22-04-2016 IPR019401 Zinc finger, CHCC-type RPIC_RS02390 93afcbac9fab898de4987b87191ba19a 65 Pfam PF10276 Zinc-finger domain 28 53 1.7E-9 T 22-04-2016 IPR019401 Zinc finger, CHCC-type RPIC_RS05130 3b94cfddb3161d84ea14ad41761537e5 951 SUPERFAMILY SSF52540 293 651 1.49E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05130 3b94cfddb3161d84ea14ad41761537e5 951 Pfam PF12705 PD-(D/E)XK nuclease superfamily 681 935 2.0E-29 T 22-04-2016 RPIC_RS05130 3b94cfddb3161d84ea14ad41761537e5 951 Gene3D G3DSA:3.40.50.300 286 364 5.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05130 3b94cfddb3161d84ea14ad41761537e5 951 Gene3D G3DSA:3.40.50.300 545 579 5.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 PANTHER PTHR33711 16 230 4.1E-67 T 22-04-2016 RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 73 101 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 Pfam PF00775 Dioxygenase 65 217 8.1E-19 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 Gene3D G3DSA:2.60.130.10 26 230 7.7E-65 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 30 231 7.5E-75 T 22-04-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 SUPERFAMILY SSF49482 26 230 1.11E-57 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC_RS06550 9869cc56a18c75349feb75b857768180 231 PANTHER PTHR33711:SF2 16 230 4.1E-67 T 22-04-2016 RPIC_RS03515 2e45f1efebd9c5513705607f32895925 161 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 14 156 7.3E-37 T 22-04-2016 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 SMART SM00382 44 226 3.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 Pfam PF00005 ABC transporter 35 174 2.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 Pfam PF09821 C-terminal AAA-associated domain 310 427 5.1E-36 T 22-04-2016 IPR018632 C-terminal AAA-associated domain RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 PANTHER PTHR24220:SF589 16 299 4.9E-115 T 22-04-2016 RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 PANTHER PTHR24220:SF589 320 429 4.9E-115 T 22-04-2016 RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 PANTHER PTHR24220 16 299 4.9E-115 T 22-04-2016 RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 PANTHER PTHR24220 320 429 4.9E-115 T 22-04-2016 RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 Gene3D G3DSA:3.40.50.300 6 233 1.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17700 7266d5da597180de763dff1a2465bb73 457 SUPERFAMILY SSF52540 15 254 4.54E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03290 e77c24e5e7c89610f0632e1c64926dbd 1122 Pfam PF05567 Neisseria PilC beta-propeller domain 600 923 3.1E-71 T 22-04-2016 IPR008707 PilC beta-propeller domain RPIC_RS03290 e77c24e5e7c89610f0632e1c64926dbd 1122 SUPERFAMILY SSF53300 371 444 8.26E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS03290 e77c24e5e7c89610f0632e1c64926dbd 1122 SUPERFAMILY SSF53300 277 343 8.26E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS03290 e77c24e5e7c89610f0632e1c64926dbd 1122 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1041 1053 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 Gene3D G3DSA:3.40.1020.10 386 506 1.1E-47 T 22-04-2016 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 PANTHER PTHR10314 1 362 1.2E-200 T 22-04-2016 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 424 506 1.3E-25 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 322 412 5.7E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 SUPERFAMILY SSF53686 3 353 1.57E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 309 1.8E-78 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 506 2.1E-242 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 PANTHER PTHR10314:SF30 1 362 1.2E-200 T 22-04-2016 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 Gene3D G3DSA:3.40.50.1100 69 327 1.4E-83 T 22-04-2016 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 SUPERFAMILY SSF55021 413 506 7.32E-28 T 22-04-2016 RPIC_RS01590 b7fe96d467d82219bc188e7fdc6eb77b 506 SUPERFAMILY SSF55021 330 416 6.64E-25 T 22-04-2016 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 SUPERFAMILY SSF56534 23 308 3.79E-107 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 108 130 1.5E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 213 231 1.5E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 245 264 1.5E-9 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 PANTHER PTHR11473 53 266 1.1E-73 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 47 268 4.2E-45 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 Gene3D G3DSA:1.10.800.10 38 307 6.7E-99 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 43 284 1.3E-116 T 22-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 RPIC_RS17595 5d8bd49f78abfea2b97f391cb3412da1 314 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 151 162 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 RPIC_RS12915 39b456b6375b32aaba0480c4393f1566 87 Gene3D G3DSA:1.10.1220.10 44 80 1.8E-5 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 RPIC_RS12915 39b456b6375b32aaba0480c4393f1566 87 SUPERFAMILY SSF47598 44 84 5.56E-7 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 RPIC_RS18310 c13b6136b64b51febc221220677ce5a5 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 94 8.3E-17 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC_RS18310 c13b6136b64b51febc221220677ce5a5 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 99 1.3E-32 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC_RS18310 c13b6136b64b51febc221220677ce5a5 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 21.29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC_RS18310 c13b6136b64b51febc221220677ce5a5 99 PANTHER PTHR15004 1 99 1.2E-24 T 22-04-2016 RPIC_RS18310 c13b6136b64b51febc221220677ce5a5 99 SUPERFAMILY SSF141000 5 97 7.72E-25 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RPIC_RS18310 c13b6136b64b51febc221220677ce5a5 99 PANTHER PTHR15004:SF0 1 99 1.2E-24 T 22-04-2016 RPIC_RS18450 f42e55fbfb6304fe88997ab065fdcdd4 216 SUPERFAMILY SSF48498 105 215 4.45E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS18450 f42e55fbfb6304fe88997ab065fdcdd4 216 Gene3D G3DSA:1.10.357.10 25 215 2.7E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS18450 f42e55fbfb6304fe88997ab065fdcdd4 216 PANTHER PTHR30055:SF58 19 214 1.1E-55 T 22-04-2016 RPIC_RS18450 f42e55fbfb6304fe88997ab065fdcdd4 216 SUPERFAMILY SSF46689 24 97 1.28E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS18450 f42e55fbfb6304fe88997ab065fdcdd4 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 53 81 1.4E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS18450 f42e55fbfb6304fe88997ab065fdcdd4 216 PANTHER PTHR30055 19 214 1.1E-55 T 22-04-2016 RPIC_RS09840 1c290094bf96a8a6ed0499fb1d31a811 167 SUPERFAMILY SSF103088 38 154 2.75E-28 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS09840 1c290094bf96a8a6ed0499fb1d31a811 167 PANTHER PTHR30329:SF4 2 156 6.3E-33 T 22-04-2016 RPIC_RS09840 1c290094bf96a8a6ed0499fb1d31a811 167 Pfam PF00691 OmpA family 51 148 1.3E-16 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS09840 1c290094bf96a8a6ed0499fb1d31a811 167 PANTHER PTHR30329 2 156 6.3E-33 T 22-04-2016 RPIC_RS09840 1c290094bf96a8a6ed0499fb1d31a811 167 Gene3D G3DSA:3.30.1330.60 31 154 1.2E-29 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS07090 da3b23392ddc82e60e8d45303ffde9b4 150 Pfam PF13673 Acetyltransferase (GNAT) domain 49 147 5.5E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS07090 da3b23392ddc82e60e8d45303ffde9b4 150 PANTHER PTHR13355 23 149 8.8E-39 T 22-04-2016 RPIC_RS07090 da3b23392ddc82e60e8d45303ffde9b4 150 Gene3D G3DSA:3.40.630.30 23 146 6.1E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS07090 da3b23392ddc82e60e8d45303ffde9b4 150 PANTHER PTHR13355:SF8 23 149 8.8E-39 T 22-04-2016 RPIC_RS07090 da3b23392ddc82e60e8d45303ffde9b4 150 SUPERFAMILY SSF55729 14 148 7.62E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 TIGRFAM TIGR01932 hflC: HflC protein 144 284 9.9E-47 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 PANTHER PTHR10264:SF80 1 289 7.6E-79 T 22-04-2016 RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 PIRSF PIRSF005651 1 294 2.4E-89 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 SUPERFAMILY SSF117892 54 191 4.97E-26 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 PANTHER PTHR10264 1 289 7.6E-79 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 SMART SM00244 20 185 4.5E-23 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS05300 9110a05f5f509e9eb8147df6ca236846 304 Pfam PF01145 SPFH domain / Band 7 family 24 199 5.2E-29 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 Gene3D G3DSA:3.40.50.1820 32 304 6.8E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 Pfam PF00561 alpha/beta hydrolase fold 54 158 6.0E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 253 267 6.5E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 SUPERFAMILY SSF53474 30 305 2.09E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 PANTHER PTHR10992 235 309 1.6E-36 T 22-04-2016 RPIC_RS02125 2a68cf12cb2b06396f743e3c722e6ff8 318 PANTHER PTHR10992 37 210 1.6E-36 T 22-04-2016 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PANTHER PTHR11958 1 420 3.4E-222 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 5.3E-103 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.6E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 1 430 36.654 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 35 50 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 Gene3D G3DSA:1.10.3860.10 5 408 3.7E-107 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 PANTHER PTHR11958:SF47 1 420 3.4E-222 T 22-04-2016 RPIC_RS17205 ff3ad208d8ee4b31529cce38e775a2b0 446 SUPERFAMILY SSF118215 8 404 1.09E-107 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 RPIC_RS13075 5f94f4e30617db3ae655a504b4b33b9f 221 PIRSF PIRSF009320 1 200 9.8E-24 T 22-04-2016 RPIC_RS13075 5f94f4e30617db3ae655a504b4b33b9f 221 SUPERFAMILY SSF52540 1 194 1.02E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13075 5f94f4e30617db3ae655a504b4b33b9f 221 PANTHER PTHR13696 1 213 1.0E-19 T 22-04-2016 RPIC_RS13075 5f94f4e30617db3ae655a504b4b33b9f 221 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 155 5.0E-18 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RPIC_RS13075 5f94f4e30617db3ae655a504b4b33b9f 221 Gene3D G3DSA:3.40.50.300 4 202 7.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01585 c3adc72525008718c1003ca417671301 278 Gene3D G3DSA:3.30.1130.10 141 276 7.3E-54 T 22-04-2016 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 PIRSF PIRSF004750 1 278 1.3E-129 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 PANTHER PTHR34354:SF1 1 278 2.0E-88 T 22-04-2016 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 SUPERFAMILY SSF55620 181 263 4.74E-8 T 22-04-2016 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 TIGRFAM TIGR03138 QueF: queuine synthase 5 278 1.1E-125 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 Pfam PF14489 QueF-like protein 191 266 2.6E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 PANTHER PTHR34354 1 278 2.0E-88 T 22-04-2016 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 Gene3D G3DSA:3.30.1130.10 16 133 9.7E-45 T 22-04-2016 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 127 1.3E-47 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS01585 c3adc72525008718c1003ca417671301 278 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 278 159.961 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 PANTHER PTHR30237:SF2 3 307 5.6E-78 T 22-04-2016 RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 SUPERFAMILY SSF52317 3 157 5.04E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 Gene3D G3DSA:3.40.50.10740 3 155 2.5E-35 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 Gene3D G3DSA:3.50.30.60 166 296 8.5E-46 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 Pfam PF02016 LD-carboxypeptidase 4 289 1.0E-66 T 22-04-2016 IPR003507 Peptidase family S66 RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 SUPERFAMILY SSF141986 137 293 4.84E-46 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 PANTHER PTHR30237 3 307 5.6E-78 T 22-04-2016 RPIC_RS06615 d3491bfdac7004bf797adf681cc74eb6 308 PIRSF PIRSF028757 1 302 4.1E-72 T 22-04-2016 IPR003507 Peptidase family S66 RPIC_RS01840 6e292f442e3fe3c94fd5b480f6fe192b 238 PANTHER PTHR34300 12 235 7.1E-53 T 22-04-2016 RPIC_RS01840 6e292f442e3fe3c94fd5b480f6fe192b 238 PANTHER PTHR34300:SF2 12 235 7.1E-53 T 22-04-2016 RPIC_RS01840 6e292f442e3fe3c94fd5b480f6fe192b 238 Pfam PF02592 Putative vitamin uptake transporter 52 211 3.3E-47 T 22-04-2016 IPR003744 Protein of unknown function DUF165 RPIC_RS01840 6e292f442e3fe3c94fd5b480f6fe192b 238 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 19 218 1.4E-31 T 22-04-2016 IPR003744 Protein of unknown function DUF165 RPIC_RS07060 826c900f140a2156236366ff7d5945a9 332 Pfam PF02618 YceG-like family 40 326 5.9E-83 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RPIC_RS07060 826c900f140a2156236366ff7d5945a9 332 PANTHER PTHR30518 8 329 2.3E-90 T 22-04-2016 RPIC_RS07060 826c900f140a2156236366ff7d5945a9 332 Gene3D G3DSA:3.30.160.60 299 329 6.7E-17 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 RPIC_RS07060 826c900f140a2156236366ff7d5945a9 332 PANTHER PTHR30518:SF2 8 329 2.3E-90 T 22-04-2016 RPIC_RS07060 826c900f140a2156236366ff7d5945a9 332 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 328 2.2E-85 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 SMART SM00062 40 267 1.7E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 Gene3D G3DSA:3.40.190.10 122 244 2.1E-30 T 22-04-2016 RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 Pfam PF09084 NMT1/THI5 like 65 258 1.4E-17 T 22-04-2016 IPR015168 SsuA/THI5-like RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 PANTHER PTHR30024 1 322 7.7E-120 T 22-04-2016 RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 41 320 1.5E-72 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 SUPERFAMILY SSF53850 39 275 8.47E-53 T 22-04-2016 RPIC_RS06025 1650df58df8cc104a68bb06d9440854a 330 PANTHER PTHR30024:SF11 1 322 7.7E-120 T 22-04-2016 RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 PANTHER PTHR11614 21 289 3.9E-72 T 22-04-2016 RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 Pfam PF12146 Serine aminopeptidase, S33 39 270 1.8E-71 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 SUPERFAMILY SSF53474 20 288 2.57E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 Gene3D G3DSA:3.40.50.1820 21 287 3.1E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 226 240 5.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 83 5.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 5.4E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS17555 f883f74599726e044328d9e898b0b000 289 PANTHER PTHR11614:SF87 21 289 3.9E-72 T 22-04-2016 RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 SMART SM00091 191 257 0.0071 T 22-04-2016 IPR000014 PAS domain RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 SUPERFAMILY SSF55781 37 190 3.93E-22 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 SUPERFAMILY SSF55785 182 310 9.42E-16 T 22-04-2016 IPR000014 PAS domain RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 Gene3D G3DSA:3.30.450.20 189 310 4.0E-15 T 22-04-2016 RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 Gene3D G3DSA:3.30.450.40 25 188 2.3E-17 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 SMART SM00065 35 187 1.9E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 Pfam PF00989 PAS fold 191 308 4.3E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 Pfam PF13185 GAF domain 36 178 8.5E-13 T 22-04-2016 IPR003018 GAF domain GO:0005515 RPIC_RS21055 0cedef6f53ea9075b698f288232b2cfb 329 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 187 224 1.4E-5 T 22-04-2016 IPR000014 PAS domain RPIC_RS20740 d076648ed9a98384ad2297ab25473464 247 Gene3D G3DSA:1.10.443.10 164 244 9.9E-6 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS20740 d076648ed9a98384ad2297ab25473464 247 Gene3D G3DSA:1.10.150.130 32 120 4.7E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS20740 d076648ed9a98384ad2297ab25473464 247 SUPERFAMILY SSF56349 26 245 1.41E-21 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 SUPERFAMILY SSF81301 16 143 1.42E-28 T 22-04-2016 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 Gene3D G3DSA:1.10.3090.10 146 383 1.1E-52 T 22-04-2016 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 SMART SM00471 246 360 0.0025 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 233 1.1E-10 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 Pfam PF01966 HD domain 253 332 3.2E-9 T 22-04-2016 IPR006674 HD domain RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 Pfam PF01743 Poly A polymerase head domain 21 145 2.5E-15 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 Hamap MF_01261 Multifunctional CCA protein [cca]. 19 428 50.662 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 SUPERFAMILY SSF81891 146 381 1.57E-50 T 22-04-2016 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 PIRSF PIRSF000813 19 428 5.9E-197 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 PANTHER PTHR13734 17 313 6.6E-63 T 22-04-2016 RPIC_RS18175 97197aa4ce23c3496a37400fdd89990e 428 Gene3D G3DSA:3.30.460.10 15 145 1.3E-29 T 22-04-2016 RPIC_RS17810 2419852a6c53761cf3238879af041243 207 PIRSF PIRSF001296 18 207 1.6E-77 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC_RS17810 2419852a6c53761cf3238879af041243 207 PANTHER PTHR30042 16 207 2.6E-87 T 22-04-2016 RPIC_RS17810 2419852a6c53761cf3238879af041243 207 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 22 205 7.6E-70 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC_RS17810 2419852a6c53761cf3238879af041243 207 PANTHER PTHR30042:SF2 16 207 2.6E-87 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC_RS17810 2419852a6c53761cf3238879af041243 207 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 19 206 36.087 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC_RS17810 2419852a6c53761cf3238879af041243 207 Pfam PF02669 K+-transporting ATPase, c chain 23 204 2.2E-74 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RPIC_RS14365 417378fa1ee90a3a0f88f8c03363a4bc 157 Pfam PF13633 Prokaryotic N-terminal methylation site 9 34 1.6E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14365 417378fa1ee90a3a0f88f8c03363a4bc 157 Gene3D G3DSA:3.30.700.10 11 141 1.7E-7 T 22-04-2016 RPIC_RS14365 417378fa1ee90a3a0f88f8c03363a4bc 157 Pfam PF12019 Type II transport protein GspH 49 147 1.2E-11 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC_RS14365 417378fa1ee90a3a0f88f8c03363a4bc 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 4.9E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS14365 417378fa1ee90a3a0f88f8c03363a4bc 157 SUPERFAMILY SSF54523 11 128 3.92E-17 T 22-04-2016 RPIC_RS24165 48c5b67efcc58df6f942b7108d22653e 423 Pfam PF00534 Glycosyl transferases group 1 127 270 2.1E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS24165 48c5b67efcc58df6f942b7108d22653e 423 SUPERFAMILY SSF53756 20 295 9.42E-39 T 22-04-2016 RPIC_RS24165 48c5b67efcc58df6f942b7108d22653e 423 Gene3D G3DSA:3.40.50.2000 127 269 9.3E-16 T 22-04-2016 RPIC_RS24165 48c5b67efcc58df6f942b7108d22653e 423 PANTHER PTHR12526:SF399 7 338 2.6E-34 T 22-04-2016 RPIC_RS24165 48c5b67efcc58df6f942b7108d22653e 423 PANTHER PTHR12526 7 338 2.6E-34 T 22-04-2016 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 315 44.563 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 SUPERFAMILY SSF52768 9 313 2.52E-81 T 22-04-2016 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 313 1.9E-102 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 PANTHER PTHR11358 4 314 2.5E-104 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 PANTHER PTHR11358:SF35 4 314 2.5E-104 T 22-04-2016 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 Gene3D G3DSA:3.40.800.10 4 316 8.2E-106 T 22-04-2016 IPR023696 Ureohydrolase domain RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 Pfam PF00491 Arginase family 41 313 4.8E-65 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS14185 5f4862776145ad5cd25c4d0645d9b4e9 325 PIRSF PIRSF036979 29 316 4.3E-27 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 PANTHER PTHR11802 121 259 1.4E-12 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 Gene3D G3DSA:3.40.50.1820 379 386 3.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 Gene3D G3DSA:3.40.50.1820 434 539 3.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 Gene3D G3DSA:3.40.50.1820 90 347 3.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 Pfam PF00450 Serine carboxypeptidase 112 261 9.2E-16 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 PANTHER PTHR11802:SF30 121 259 1.4E-12 T 22-04-2016 RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 SUPERFAMILY SSF53474 394 569 3.68E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04270 a2b14ac62aa212cf3a9a99ea9cf9417d 601 SUPERFAMILY SSF53474 97 351 3.68E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 SUPERFAMILY SSF52402 2 186 1.88E-55 T 22-04-2016 RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 3.3E-34 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 SMART SM00893 3 182 2.0E-57 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 PIRSF PIRSF000089 1 310 3.5E-102 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 Gene3D G3DSA:3.40.50.1220 185 309 4.0E-58 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 Pfam PF01012 Electron transfer flavoprotein domain 3 171 4.7E-38 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 PANTHER PTHR10909 104 307 3.1E-119 T 22-04-2016 RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 PANTHER PTHR10909:SF294 104 307 3.1E-119 T 22-04-2016 RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 Gene3D G3DSA:3.40.50.620 1 180 1.4E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 SUPERFAMILY SSF52467 189 309 1.36E-43 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain RPIC_RS13000 39d12a20a87b8b1b48e8e0e47542664d 310 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RPIC_RS13355 773daa5302819ac58cbe3be9f79715d4 162 Gene3D G3DSA:3.10.50.40 148 161 4.0E-19 T 22-04-2016 RPIC_RS13355 773daa5302819ac58cbe3be9f79715d4 162 Gene3D G3DSA:3.10.50.40 13 94 4.0E-19 T 22-04-2016 RPIC_RS13355 773daa5302819ac58cbe3be9f79715d4 162 SUPERFAMILY SSF54534 22 161 6.68E-32 T 22-04-2016 RPIC_RS13355 773daa5302819ac58cbe3be9f79715d4 162 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 22 159 2.2E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 Pfam PF13450 NAD(P)-binding Rossmann-like domain 29 76 1.3E-7 T 22-04-2016 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 PANTHER PTHR23023:SF30 22 491 1.3E-215 T 22-04-2016 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 SUPERFAMILY SSF51905 22 403 4.68E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 26 48 3.2E-5 T 22-04-2016 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 201 226 3.2E-5 T 22-04-2016 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 PANTHER PTHR23023 22 491 1.3E-215 T 22-04-2016 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 Pfam PF00743 Flavin-binding monooxygenase-like 98 243 1.4E-13 T 22-04-2016 IPR020946 Flavin monooxygenase-like GO:0004499|GO:0050660|GO:0050661|GO:0055114 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 Gene3D G3DSA:3.50.50.60 17 239 7.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02120 b92ab3e33747b23931216927877dfdde 516 Gene3D G3DSA:3.50.50.60 346 485 1.4E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 PANTHER PTHR32303 2 286 2.4E-45 T 22-04-2016 RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 Gene3D G3DSA:2.140.10.10 2 290 3.0E-48 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 291 25.913 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 PANTHER PTHR32303:SF8 2 286 2.4E-45 T 22-04-2016 RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SUPERFAMILY SSF50998 2 290 3.73E-63 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 Pfam PF13360 PQQ-like domain 1 231 8.9E-59 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SMART SM00564 27 58 450.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SMART SM00564 241 273 11.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SMART SM00564 66 98 0.01 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SMART SM00564 200 232 23.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SMART SM00564 111 143 8.9 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 SMART SM00564 162 194 700.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat RPIC_RS23665 9fa9bbaf31dbff33fe53f387e2568dc2 291 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 291 6.8E-110 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 PANTHER PTHR21708 137 320 4.1E-81 T 22-04-2016 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 PANTHER PTHR21708 1 121 4.1E-81 T 22-04-2016 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 SUPERFAMILY SSF48179 197 318 7.82E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 Gene3D G3DSA:1.10.1040.10 197 318 2.2E-24 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 197 317 1.6E-23 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 Gene3D G3DSA:3.40.50.720 2 194 9.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 168 1.3E-25 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 PANTHER PTHR21708:SF29 137 320 4.1E-81 T 22-04-2016 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 PANTHER PTHR21708:SF29 1 121 4.1E-81 T 22-04-2016 RPIC_RS17640 d00dfe7105e2cd47bbc8a16710eaab58 325 SUPERFAMILY SSF51735 3 158 1.34E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05320 42d35ebceae1972b0dc59d8b04fb13f1 190 Pfam PF00156 Phosphoribosyl transferase domain 16 161 4.0E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 RPIC_RS05320 42d35ebceae1972b0dc59d8b04fb13f1 190 SUPERFAMILY SSF53271 5 177 2.56E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS05320 42d35ebceae1972b0dc59d8b04fb13f1 190 Gene3D G3DSA:3.40.50.2020 9 167 3.2E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 SUPERFAMILY SSF51556 1 263 3.18E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 PIRSF PIRSF005902 1 265 4.8E-81 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 Pfam PF01026 TatD related DNase 3 263 5.1E-80 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 PANTHER PTHR10060:SF20 1 266 3.3E-123 T 22-04-2016 RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 263 1.1E-84 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 PANTHER PTHR10060 1 266 3.3E-123 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC_RS07040 bc0737aec0b6683b205cc813ba7ae45f 267 Gene3D G3DSA:3.20.20.140 1 263 2.4E-90 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PANTHER PTHR22912 257 580 7.3E-256 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PANTHER PTHR22912 106 235 7.3E-256 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 464 485 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 529 544 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 322 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 400 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 436 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 551 571 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 271 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 121 143 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 169 5.4E-68 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 141 2.2E-38 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 315 2.2E-38 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 277 2.2E-38 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 401 2.2E-38 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 414 436 2.2E-38 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 SUPERFAMILY SSF51905 118 458 7.07E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 SUPERFAMILY SSF51230 2 95 1.81E-21 T 22-04-2016 IPR011053 Single hybrid motif RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Gene3D G3DSA:3.50.50.60 120 270 4.0E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PANTHER PTHR22912:SF160 257 580 7.3E-256 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 PANTHER PTHR22912:SF160 106 235 7.3E-256 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 122 449 4.6E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Pfam PF00364 Biotin-requiring enzyme 5 75 3.7E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 SUPERFAMILY SSF55424 464 586 2.75E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Gene3D G3DSA:3.50.50.60 389 462 8.4E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 468 576 1.1E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Gene3D G3DSA:3.30.390.30 463 579 2.3E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Gene3D G3DSA:3.50.50.60 276 388 1.1E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 155 165 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 Gene3D G3DSA:2.40.50.100 4 78 1.5E-18 T 22-04-2016 RPIC_RS09550 d123b4316cb93727cb3322a21daa1564 593 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 121 578 5.9E-142 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 PIRSF PIRSF028756 11 300 1.6E-134 T 22-04-2016 IPR016898 Polyphosphate kinase 2 RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 PANTHER PTHR34383:SF1 2 300 7.0E-203 T 22-04-2016 RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 SUPERFAMILY SSF52540 76 266 2.47E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 Gene3D G3DSA:3.40.50.300 44 279 3.8E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 47 269 8.6E-113 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 PANTHER PTHR34383 2 300 7.0E-203 T 22-04-2016 RPIC_RS17685 70df632df116e73ceefe80077804ff67 300 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 46 269 5.9E-115 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 RPIC_RS06585 1946283b3f07111588244e87955bd2de 232 Gene3D G3DSA:3.40.30.10 27 214 1.5E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06585 1946283b3f07111588244e87955bd2de 232 SUPERFAMILY SSF52833 28 216 5.43E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06585 1946283b3f07111588244e87955bd2de 232 PANTHER PTHR13887 11 213 3.2E-25 T 22-04-2016 RPIC_RS06585 1946283b3f07111588244e87955bd2de 232 PIRSF PIRSF006386 24 226 4.2E-46 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RPIC_RS06585 1946283b3f07111588244e87955bd2de 232 Pfam PF01323 DSBA-like thioredoxin domain 28 214 1.3E-28 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC_RS01145 8f2da546817bf46cd346ef12637ad462 283 Gene3D G3DSA:1.10.3720.10 83 278 5.0E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01145 8f2da546817bf46cd346ef12637ad462 283 PANTHER PTHR30151:SF7 34 280 2.8E-89 T 22-04-2016 RPIC_RS01145 8f2da546817bf46cd346ef12637ad462 283 SUPERFAMILY SSF161098 86 269 2.62E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01145 8f2da546817bf46cd346ef12637ad462 283 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 75 269 3.5E-74 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 RPIC_RS01145 8f2da546817bf46cd346ef12637ad462 283 PANTHER PTHR30151 34 280 2.8E-89 T 22-04-2016 RPIC_RS01145 8f2da546817bf46cd346ef12637ad462 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 275 2.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS01335 65dfbb6464c7db6ab5912b9fc6184940 205 Pfam PF01810 LysE type translocator 13 203 8.3E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS01335 65dfbb6464c7db6ab5912b9fc6184940 205 PANTHER PTHR30086 1 203 6.0E-70 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS01335 65dfbb6464c7db6ab5912b9fc6184940 205 PANTHER PTHR30086:SF3 1 203 6.0E-70 T 22-04-2016 RPIC_RS01335 65dfbb6464c7db6ab5912b9fc6184940 205 PIRSF PIRSF006324 1 205 1.1E-58 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS13810 305784f42ab87049a95b80c113e86003 469 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 33 379 7.7E-130 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS13810 305784f42ab87049a95b80c113e86003 469 Pfam PF02601 Exonuclease VII, large subunit 148 457 8.9E-96 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RPIC_RS13810 305784f42ab87049a95b80c113e86003 469 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 29 461 27.722 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RPIC_RS13810 305784f42ab87049a95b80c113e86003 469 PANTHER PTHR30008 24 461 1.6E-150 T 22-04-2016 RPIC_RS13810 305784f42ab87049a95b80c113e86003 469 PANTHER PTHR30008:SF0 24 461 1.6E-150 T 22-04-2016 RPIC_RS13810 305784f42ab87049a95b80c113e86003 469 Pfam PF13742 OB-fold nucleic acid binding domain 32 124 9.6E-29 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 PANTHER PTHR14226 158 481 1.5E-73 T 22-04-2016 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 Pfam PF01734 Patatin-like phospholipase 56 247 3.3E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 PANTHER PTHR14226:SF37 1 142 1.5E-73 T 22-04-2016 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 Gene3D G3DSA:3.40.1090.10 48 250 1.9E-9 T 22-04-2016 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 PANTHER PTHR14226 1 142 1.5E-73 T 22-04-2016 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 SUPERFAMILY SSF52151 153 270 3.4E-53 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 SUPERFAMILY SSF52151 51 124 3.4E-53 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 Pfam PF01103 Surface antigen 443 635 1.9E-9 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RPIC_RS04115 5259507952732a0e6ac455672a3bc487 640 PANTHER PTHR14226:SF37 158 481 1.5E-73 T 22-04-2016 RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 SUPERFAMILY SSF48150 42 209 6.98E-40 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 PANTHER PTHR10242:SF0 2 209 2.7E-59 T 22-04-2016 RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 PANTHER PTHR10242 2 209 2.7E-59 T 22-04-2016 RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 Gene3D G3DSA:1.10.340.30 46 157 1.5E-28 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 Gene3D G3DSA:1.10.1670.10 160 209 2.9E-15 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 51 192 6.4E-14 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS13995 f618a3a8ceee5af8cfaeb83bdf6ce47e 216 SMART SM00478 55 211 4.2E-14 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 Gene3D G3DSA:3.40.50.1240 1 248 5.1E-95 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 218 7.5E-34 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.074 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 SUPERFAMILY SSF53254 1 245 8.49E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 SMART SM00855 3 189 9.8E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 2 246 5.5E-113 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RPIC_RS01015 477d771fe0682e3cd144268cc0a0302c 248 PANTHER PTHR11931 1 248 8.9E-155 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 RPIC_RS21520 5871242ed2b17031e520fc9c238d7e8c 109 PANTHER PTHR32089:SF43 1 109 4.0E-18 T 22-04-2016 RPIC_RS21520 5871242ed2b17031e520fc9c238d7e8c 109 SUPERFAMILY SSF58104 2 108 1.01E-7 T 22-04-2016 RPIC_RS21520 5871242ed2b17031e520fc9c238d7e8c 109 Gene3D G3DSA:1.10.287.950 8 75 1.2E-4 T 22-04-2016 RPIC_RS21520 5871242ed2b17031e520fc9c238d7e8c 109 PANTHER PTHR32089 1 109 4.0E-18 T 22-04-2016 RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 PANTHER PTHR24220:SF404 3 230 3.1E-127 T 22-04-2016 RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 SUPERFAMILY SSF52540 2 219 2.02E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 SMART SM00382 26 209 2.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 PANTHER PTHR24220 3 230 3.1E-127 T 22-04-2016 RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 Gene3D G3DSA:3.40.50.300 1 219 1.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 1.5E-104 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE RPIC_RS10760 f20f84ede18bcbe45e298d17a222b3f1 230 Pfam PF00005 ABC transporter 17 159 9.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 SUPERFAMILY SSF51064 159 213 2.22E-17 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 Pfam PF01025 GrpE 57 212 4.7E-46 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 PRINTS PR00773 GrpE protein signature 86 102 3.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 PRINTS PR00773 GrpE protein signature 114 129 3.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 PRINTS PR00773 GrpE protein signature 166 181 3.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 PRINTS PR00773 GrpE protein signature 192 211 3.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 ProSitePatterns PS01071 grpE protein signature. 169 211 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 SUPERFAMILY SSF58014 63 156 2.62E-22 T 22-04-2016 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 Gene3D G3DSA:2.30.22.10 159 214 1.9E-25 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 Gene3D G3DSA:3.90.20.20 63 156 7.3E-26 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 Hamap MF_01151 Protein GrpE [grpE]. 15 213 18.811 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS14160 f8ec56fb91487f408c86c03f83423762 215 PANTHER PTHR21237 34 215 2.1E-52 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PANTHER PTHR24423:SF474 8 22 1.4E-67 T 22-04-2016 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PANTHER PTHR24423:SF474 237 499 1.4E-67 T 22-04-2016 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 Pfam PF00672 HAMP domain 229 291 5.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 SUPERFAMILY SSF47384 279 360 1.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 Gene3D G3DSA:3.30.565.10 347 527 3.0E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 Gene3D G3DSA:1.10.287.130 289 346 9.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 SUPERFAMILY SSF55874 351 521 8.77E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 Pfam PF08521 Two-component sensor kinase N-terminal 75 219 1.9E-45 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 521 2.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 520 4.8E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 Pfam PF00512 His Kinase A (phospho-acceptor) domain 297 360 7.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PANTHER PTHR24423 8 22 1.4E-67 T 22-04-2016 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 PANTHER PTHR24423 237 499 1.4E-67 T 22-04-2016 RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 SMART SM00387 407 524 1.6E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS02300 34e994af22a4da3150c44c575c16756d 531 SMART SM00388 296 361 1.5E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS12900 83035bba3e19c76feac3f056fa866637 93 SUPERFAMILY SSF46955 21 78 3.11E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS12900 83035bba3e19c76feac3f056fa866637 93 Pfam PF12728 Helix-turn-helix domain 22 72 2.3E-9 T 22-04-2016 RPIC_RS12900 83035bba3e19c76feac3f056fa866637 93 Gene3D G3DSA:1.10.10.10 21 76 7.4E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS08805 e6975c3f87d96b6c8d08a2a285ec2268 216 Pfam PF04191 Phospholipid methyltransferase 99 189 1.6E-8 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 RPIC_RS08805 e6975c3f87d96b6c8d08a2a285ec2268 216 PANTHER PTHR12714 97 207 7.1E-18 T 22-04-2016 RPIC_RS08805 e6975c3f87d96b6c8d08a2a285ec2268 216 PANTHER PTHR12714:SF11 97 207 7.1E-18 T 22-04-2016 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 439 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 399 3.1E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 PANTHER PTHR24423:SF497 190 442 5.4E-58 T 22-04-2016 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 SUPERFAMILY SSF47384 215 283 1.96E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 SMART SM00388 220 288 1.0E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 PANTHER PTHR24423 190 442 5.4E-58 T 22-04-2016 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 SUPERFAMILY SSF55874 301 440 3.14E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 SMART SM00387 330 442 1.4E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 283 2.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 Gene3D G3DSA:3.30.565.10 295 440 6.5E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS14650 91e6cf4bed15874caefb6a078ef10c11 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 440 2.1E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 Pfam PF00106 short chain dehydrogenase 2 187 2.5E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.9E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 Gene3D G3DSA:3.40.50.720 2 233 1.3E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PANTHER PTHR24322:SF392 5 131 1.9E-75 T 22-04-2016 RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PANTHER PTHR24322:SF392 147 179 1.9E-75 T 22-04-2016 RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PANTHER PTHR24322 5 131 1.9E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 PANTHER PTHR24322 147 179 1.9E-75 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS03315 56fb391fd918f4bf19aba6461cafc438 250 SUPERFAMILY SSF51735 2 224 6.39E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14895 63ae7e1b95aa0645bcdeb776fbda1918 192 Pfam PF04345 Chorismate lyase 28 184 2.0E-22 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RPIC_RS14895 63ae7e1b95aa0645bcdeb776fbda1918 192 SUPERFAMILY SSF64288 10 188 1.6E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC_RS14895 63ae7e1b95aa0645bcdeb776fbda1918 192 Gene3D G3DSA:3.40.1410.10 17 185 3.7E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RPIC_RS14895 63ae7e1b95aa0645bcdeb776fbda1918 192 PANTHER PTHR38683 1 185 3.5E-22 T 22-04-2016 RPIC_RS14895 63ae7e1b95aa0645bcdeb776fbda1918 192 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 10 188 24.326 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 RPIC_RS00220 b4780110cd432011414c3075685fcbea 429 Pfam PF07690 Major Facilitator Superfamily 19 367 2.9E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS00220 b4780110cd432011414c3075685fcbea 429 SUPERFAMILY SSF103473 11 416 2.49E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS00220 b4780110cd432011414c3075685fcbea 429 Gene3D G3DSA:1.20.1250.20 220 405 8.4E-17 T 22-04-2016 RPIC_RS00220 b4780110cd432011414c3075685fcbea 429 Gene3D G3DSA:1.20.1250.20 11 199 1.7E-14 T 22-04-2016 RPIC_RS00220 b4780110cd432011414c3075685fcbea 429 PANTHER PTHR12778 4 404 1.9E-114 T 22-04-2016 RPIC_RS16110 d1e2c1e70d8de14dcb94baec8104a671 395 PANTHER PTHR30071:SF5 120 395 5.0E-67 T 22-04-2016 RPIC_RS16110 d1e2c1e70d8de14dcb94baec8104a671 395 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 156 393 1.0E-74 T 22-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 RPIC_RS16110 d1e2c1e70d8de14dcb94baec8104a671 395 PANTHER PTHR30071 120 395 5.0E-67 T 22-04-2016 RPIC_RS16110 d1e2c1e70d8de14dcb94baec8104a671 395 Pfam PF01578 Cytochrome C assembly protein 186 390 1.8E-49 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 Gene3D G3DSA:3.40.50.300 2 236 6.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 SUPERFAMILY SSF52540 4 239 4.22E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 PANTHER PTHR24220:SF469 7 233 5.6E-85 T 22-04-2016 RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 SMART SM00382 30 225 1.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 PANTHER PTHR24220 7 233 5.6E-85 T 22-04-2016 RPIC_RS17540 5d30d6d3f0fb9404b8a6fc50a3f601b1 246 Pfam PF00005 ABC transporter 21 173 3.5E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS12335 3e9315324ffd9b0f11db843b0e02ac42 376 Gene3D G3DSA:2.40.160.10 28 376 6.3E-70 T 22-04-2016 IPR023614 Porin domain RPIC_RS12335 3e9315324ffd9b0f11db843b0e02ac42 376 Pfam PF13609 Gram-negative porin 15 337 3.7E-50 T 22-04-2016 RPIC_RS12335 3e9315324ffd9b0f11db843b0e02ac42 376 SUPERFAMILY SSF56935 28 376 2.62E-64 T 22-04-2016 RPIC_RS13055 dd423e8285081e4e99e4bad71c5853d1 234 SUPERFAMILY SSF54427 93 227 4.82E-28 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS13055 dd423e8285081e4e99e4bad71c5853d1 234 Pfam PF04335 VirB8 protein 23 225 3.7E-69 T 22-04-2016 IPR007430 Bacterial virulence protein VirB8 GO:0016020 RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 SUPERFAMILY SSF75217 73 248 8.22E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 PANTHER PTHR30027 1 249 3.4E-76 T 22-04-2016 RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 10 247 1.3E-52 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 PANTHER PTHR30027:SF3 1 249 3.4E-76 T 22-04-2016 RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 PIRSF PIRSF015601 3 249 1.5E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 SUPERFAMILY SSF88697 3 70 7.46E-15 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 Gene3D G3DSA:3.40.1280.10 3 248 2.2E-79 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RPIC_RS14785 b65652e598f87d87a2e9d88eb5bb7af7 249 Pfam PF04452 RNA methyltransferase 18 243 1.3E-67 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS03500 5e711c5517d6e8206264dc54d9350a47 361 Gene3D G3DSA:3.20.20.410 50 352 7.4E-63 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RPIC_RS03500 5e711c5517d6e8206264dc54d9350a47 361 Pfam PF01904 Protein of unknown function DUF72 82 350 7.1E-37 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RPIC_RS03500 5e711c5517d6e8206264dc54d9350a47 361 SUPERFAMILY SSF117396 60 352 1.7E-44 T 22-04-2016 IPR002763 Protein of unknown function DUF72 RPIC_RS03500 5e711c5517d6e8206264dc54d9350a47 361 PANTHER PTHR30348 1 357 2.4E-16 T 22-04-2016 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 4.6E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 4.6E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 4.6E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 4.6E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 SMART SM00347 22 122 2.9E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 Pfam PF01047 MarR family 30 87 1.8E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 PANTHER PTHR33164 3 146 2.8E-29 T 22-04-2016 RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 SUPERFAMILY SSF46785 3 135 1.57E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 Gene3D G3DSA:1.10.10.10 3 135 1.6E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05595 effb57f67ee6a40580158f812463c019 149 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 158.445 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 Pfam PF02504 Fatty acid synthesis protein 3 326 3.1E-109 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 336 2.4E-117 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 Gene3D G3DSA:3.40.718.10 2 334 4.0E-136 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 SUPERFAMILY SSF53659 3 335 2.45E-105 T 22-04-2016 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 PIRSF PIRSF002465 1 338 2.7E-130 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 PANTHER PTHR30100 1 341 1.0E-136 T 22-04-2016 RPIC_RS04495 7fc22c25eec69519471b9663fc530ee0 353 PANTHER PTHR30100:SF1 1 341 1.0E-136 T 22-04-2016 RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 SUPERFAMILY SSF89796 8 401 2.62E-132 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 Pfam PF02515 CoA-transferase family III 10 378 7.4E-124 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 Gene3D G3DSA:3.40.50.10540 311 401 1.1E-106 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 Gene3D G3DSA:3.40.50.10540 6 221 1.1E-106 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 PANTHER PTHR24023:SF593 86 388 2.2E-35 T 22-04-2016 RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 Gene3D G3DSA:3.30.1540.10 227 310 3.2E-27 T 22-04-2016 RPIC_RS06845 706155f46569f2c5c45789591dca6b49 401 PANTHER PTHR24023 86 388 2.2E-35 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 Pfam PF10531 SLBB domain 278 307 0.011 T 22-04-2016 IPR019554 Soluble ligand binding domain RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 Gene3D G3DSA:3.10.560.10 248 360 1.1E-24 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 Gene3D G3DSA:3.10.560.10 168 247 3.9E-18 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 PANTHER PTHR33619 124 377 1.6E-30 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 PANTHER PTHR33619 36 102 1.6E-30 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 172 2.0E-17 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 Gene3D G3DSA:3.30.1950.10 86 167 3.2E-23 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 PANTHER PTHR33619:SF3 124 377 1.6E-30 T 22-04-2016 RPIC_RS05760 d5b369b7a4b658f3c15ad173f727ff15 388 PANTHER PTHR33619:SF3 36 102 1.6E-30 T 22-04-2016 RPIC_RS05875 6c439cdd7530a93bbe2754e2dce11961 108 SUPERFAMILY SSF50249 10 101 1.95E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS05875 6c439cdd7530a93bbe2754e2dce11961 108 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 11 103 1.6E-29 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RPIC_RS05875 6c439cdd7530a93bbe2754e2dce11961 108 PIRSF PIRSF003135 4 105 1.9E-12 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 RPIC_RS05875 6c439cdd7530a93bbe2754e2dce11961 108 Gene3D G3DSA:2.40.50.140 2 101 4.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.84 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 SUPERFAMILY SSF51366 1 239 9.42E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 PANTHER PTHR21235 1 245 4.7E-100 T 22-04-2016 RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 Pfam PF00977 Histidine biosynthesis protein 3 232 2.7E-81 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 PANTHER PTHR21235:SF15 1 245 4.7E-100 T 22-04-2016 RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 237 4.7E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 RPIC_RS15915 6c2fb2c00ad7b036f1019c8243b3b73b 247 Gene3D G3DSA:3.20.20.70 1 240 8.6E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 PANTHER PTHR22572:SF117 92 307 2.1E-45 T 22-04-2016 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 PANTHER PTHR22572 92 307 2.1E-45 T 22-04-2016 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 271 305 0.18 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 339 36.202 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Gene3D G3DSA:2.160.10.10 153 308 7.8E-38 T 22-04-2016 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Gene3D G3DSA:2.160.10.10 108 152 1.8E-10 T 22-04-2016 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 234 268 4.1E-7 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 153 187 7.2E-9 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 151 3.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 94 1.0E-19 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 SUPERFAMILY SSF51161 31 329 5.29E-78 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS06400 b73e5002adb68ff863ca60a34dcd6997 357 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 342 3.4E-107 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 Gene3D G3DSA:3.30.420.40 155 343 4.3E-71 T 22-04-2016 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 PANTHER PTHR30605 6 383 1.8E-143 T 22-04-2016 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 SUPERFAMILY SSF53067 74 119 1.17E-21 T 22-04-2016 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 SUPERFAMILY SSF53067 14 47 1.17E-21 T 22-04-2016 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 SUPERFAMILY SSF53067 153 356 1.17E-21 T 22-04-2016 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 Pfam PF03702 Uncharacterised protein family (UPF0075) 13 384 1.1E-139 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RPIC_RS01820 b6921da3f11581e9d62f1fdd825ccfbc 384 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 12 384 41.001 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PANTHER PTHR30487 62 282 1.8E-100 T 22-04-2016 RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PANTHER PTHR30487 6 42 1.8E-100 T 22-04-2016 RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 Pfam PF01478 Type IV leader peptidase family 140 248 5.6E-27 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PANTHER PTHR30487:SF0 62 282 1.8E-100 T 22-04-2016 RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PANTHER PTHR30487:SF0 6 42 1.8E-100 T 22-04-2016 RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 148 165 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 216 227 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 228 243 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 205 215 6.2E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS15140 44bcba3960a1cca0c6f181db6c0586c1 293 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 24 129 3.7E-35 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- RPIC_RS18445 233b39814affc7a6625fc7f1b2d63c1a 285 PANTHER PTHR12725 12 223 3.2E-16 T 22-04-2016 RPIC_RS18445 233b39814affc7a6625fc7f1b2d63c1a 285 Pfam PF13419 Haloacid dehalogenase-like hydrolase 33 215 1.9E-7 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS18445 233b39814affc7a6625fc7f1b2d63c1a 285 Gene3D G3DSA:3.40.50.1000 32 228 4.1E-18 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS18445 233b39814affc7a6625fc7f1b2d63c1a 285 SUPERFAMILY SSF56784 31 221 1.13E-26 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS18445 233b39814affc7a6625fc7f1b2d63c1a 285 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 32 215 8.6E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 SUPERFAMILY SSF56935 27 354 1.54E-77 T 22-04-2016 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 PRINTS PR00184 Neisseria sp. porin signature 161 178 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 PRINTS PR00184 Neisseria sp. porin signature 65 90 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 PRINTS PR00184 Neisseria sp. porin signature 296 320 1.2E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 Gene3D G3DSA:2.40.160.10 27 354 1.9E-86 T 22-04-2016 IPR023614 Porin domain RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 162 173 2.6E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 106 116 2.6E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 299 316 2.6E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS14770 6010b689b3bcfa3e6b43550990ce6f01 354 Pfam PF13609 Gram-negative porin 16 324 5.2E-49 T 22-04-2016 RPIC_RS18495 df895b38887044a575c638548d15e060 479 SMART SM00387 370 466 2.2E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18495 df895b38887044a575c638548d15e060 479 Pfam PF07730 Histidine kinase 254 327 1.5E-20 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC_RS18495 df895b38887044a575c638548d15e060 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 463 4.0E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18495 df895b38887044a575c638548d15e060 479 SMART SM01049 42 137 5.2E-29 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS18495 df895b38887044a575c638548d15e060 479 Gene3D G3DSA:3.30.450.20 37 189 1.1E-48 T 22-04-2016 RPIC_RS18495 df895b38887044a575c638548d15e060 479 PANTHER PTHR24421:SF1 106 479 4.9E-45 T 22-04-2016 RPIC_RS18495 df895b38887044a575c638548d15e060 479 PANTHER PTHR24421 106 479 4.9E-45 T 22-04-2016 RPIC_RS18495 df895b38887044a575c638548d15e060 479 PIRSF PIRSF037314 1 477 1.4E-188 T 22-04-2016 IPR017171 Signal transduction histidine kinase, MctS RPIC_RS18495 df895b38887044a575c638548d15e060 479 SUPERFAMILY SSF55874 361 463 1.57E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18495 df895b38887044a575c638548d15e060 479 Pfam PF17200 Single Cache domain 2 47 196 1.7E-41 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS18495 df895b38887044a575c638548d15e060 479 Gene3D G3DSA:3.30.565.10 352 463 7.5E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18185 94213d4044e73b7ea6e21e96c9ee321a 277 Gene3D G3DSA:3.20.20.70 3 276 5.3E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS18185 94213d4044e73b7ea6e21e96c9ee321a 277 Pfam PF05853 beta-keto acid cleavage enzyme 4 276 1.6E-67 T 22-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 RPIC_RS18185 94213d4044e73b7ea6e21e96c9ee321a 277 PANTHER PTHR37418 2 276 2.7E-35 T 22-04-2016 RPIC_RS08150 ce4acfc15a567f1c66fd1ede831a5d9b 627 SUPERFAMILY SSF53474 81 426 4.16E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS08150 ce4acfc15a567f1c66fd1ede831a5d9b 627 Pfam PF11339 Protein of unknown function (DUF3141) 54 597 4.8E-200 T 22-04-2016 IPR024501 Protein of unknown function DUF3141 RPIC_RS08150 ce4acfc15a567f1c66fd1ede831a5d9b 627 Gene3D G3DSA:3.40.50.1820 172 423 2.1E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS02470 9686907342637413baa534e95f4df3c1 394 PANTHER PTHR23514 21 394 1.3E-102 T 22-04-2016 RPIC_RS02470 9686907342637413baa534e95f4df3c1 394 Pfam PF07690 Major Facilitator Superfamily 28 331 8.7E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS02470 9686907342637413baa534e95f4df3c1 394 SUPERFAMILY SSF103473 14 393 4.45E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS02470 9686907342637413baa534e95f4df3c1 394 PANTHER PTHR23514:SF13 21 394 1.3E-102 T 22-04-2016 RPIC_RS02470 9686907342637413baa534e95f4df3c1 394 Gene3D G3DSA:1.20.1250.20 214 389 4.5E-11 T 22-04-2016 RPIC_RS02470 9686907342637413baa534e95f4df3c1 394 Gene3D G3DSA:1.20.1250.20 26 195 6.2E-17 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 Pfam PF13481 AAA domain 62 219 1.2E-18 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 Gene3D G3DSA:3.40.50.300 57 272 4.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 Gene3D G3DSA:3.30.230.10 281 450 1.1E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 245 271 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 319 342 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 121 138 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 210 238 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 10 34 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 171 195 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PRINTS PR01874 DNA repair protein radA signature 80 108 3.4E-95 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 361 449 1.3E-4 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 6.3E-196 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 SMART SM00382 88 241 4.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 PANTHER PTHR32472 2 453 2.5E-211 T 22-04-2016 RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 SUPERFAMILY SSF54211 252 266 4.93E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 SUPERFAMILY SSF54211 300 451 4.93E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS06185 8e9b6bb8d60ad32e4afaee13c72ea8cd 456 SUPERFAMILY SSF52540 67 284 3.53E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12090 d1141bef6268dadaf960100eb2bc3f38 344 PANTHER PTHR30482:SF2 24 339 4.8E-84 T 22-04-2016 RPIC_RS12090 d1141bef6268dadaf960100eb2bc3f38 344 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 315 5.3E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS12090 d1141bef6268dadaf960100eb2bc3f38 344 PANTHER PTHR30482 24 339 4.8E-84 T 22-04-2016 RPIC_RS00920 05dcee30ad068af3e9dd6fccfa0f3967 186 Pfam PF08534 Redoxin 46 172 3.2E-26 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC_RS00920 05dcee30ad068af3e9dd6fccfa0f3967 186 PANTHER PTHR10681:SF107 49 180 3.4E-30 T 22-04-2016 RPIC_RS00920 05dcee30ad068af3e9dd6fccfa0f3967 186 SUPERFAMILY SSF52833 45 184 5.16E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00920 05dcee30ad068af3e9dd6fccfa0f3967 186 PANTHER PTHR10681 49 180 3.4E-30 T 22-04-2016 RPIC_RS00920 05dcee30ad068af3e9dd6fccfa0f3967 186 Gene3D G3DSA:3.40.30.10 23 184 7.5E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 Gene3D G3DSA:1.10.1200.80 254 328 3.9E-26 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 Gene3D G3DSA:3.20.20.70 7 246 5.8E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 SUPERFAMILY SSF51395 10 321 2.2E-87 T 22-04-2016 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 323 50.59 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 PANTHER PTHR11082 1 328 1.2E-136 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 Pfam PF01207 Dihydrouridine synthase (Dus) 14 321 3.1E-106 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 PIRSF PIRSF006621 1 329 4.8E-107 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 3.1E-124 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 RPIC_RS01875 8ca634e92c628efe4788e90f3d6cb74e 355 PANTHER PTHR11082:SF25 1 328 1.2E-136 T 22-04-2016 RPIC_RS23670 6dfc84677cfbe33ac9b5650e83a7bf0a 106 Gene3D G3DSA:3.40.50.300 43 103 5.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS23670 6dfc84677cfbe33ac9b5650e83a7bf0a 106 PANTHER PTHR11649 4 104 6.4E-28 T 22-04-2016 RPIC_RS23670 6dfc84677cfbe33ac9b5650e83a7bf0a 106 PANTHER PTHR11649:SF5 4 104 6.4E-28 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 RPIC_RS23670 6dfc84677cfbe33ac9b5650e83a7bf0a 106 Pfam PF01926 50S ribosome-binding GTPase 47 103 1.2E-17 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS23670 6dfc84677cfbe33ac9b5650e83a7bf0a 106 SUPERFAMILY SSF52540 38 104 1.39E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 PANTHER PTHR10314:SF3 9 391 1.5E-234 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 393 52.789 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 380 3.4E-48 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 Gene3D G3DSA:3.40.50.1100 180 395 5.1E-99 T 22-04-2016 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 2.5E-194 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 PIRSF PIRSF001413 2 397 2.0E-165 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 SUPERFAMILY SSF53686 5 391 2.62E-150 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 Gene3D G3DSA:3.40.50.1100 100 179 1.6E-21 T 22-04-2016 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 RPIC_RS10510 b2a64d0815dc5f949539b4dee5b0c4bd 397 PANTHER PTHR10314 9 391 1.5E-234 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 PANTHER PTHR14911 267 338 1.2E-39 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 PANTHER PTHR14911 391 450 1.2E-39 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 PANTHER PTHR14911 5 225 1.2E-39 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 PANTHER PTHR14911:SF13 267 338 1.2E-39 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 PANTHER PTHR14911:SF13 391 450 1.2E-39 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 PANTHER PTHR14911:SF13 5 225 1.2E-39 T 22-04-2016 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 Gene3D G3DSA:3.40.50.150 158 227 1.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 Gene3D G3DSA:3.40.50.150 383 442 1.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 Gene3D G3DSA:3.40.50.150 267 327 1.1E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 SMART SM00981 67 165 1.5E-17 T 22-04-2016 IPR004114 THUMP domain GO:0003723 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 Pfam PF01170 Putative RNA methylase family UPF0020 173 329 1.4E-32 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 Pfam PF02926 THUMP domain 43 165 7.4E-9 T 22-04-2016 IPR004114 THUMP domain GO:0003723 RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 SUPERFAMILY SSF53335 270 330 2.71E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 SUPERFAMILY SSF53335 387 441 2.71E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 SUPERFAMILY SSF53335 158 230 2.71E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14665 f0a00d3bbdac58034e5d4b49a502889c 472 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 208 219 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 SUPERFAMILY SSF52540 310 483 1.22E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 317 449 1.7E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 565 686 8.9E-30 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 SMART SM00382 561 690 2.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 SMART SM00382 313 453 7.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 SUPERFAMILY SSF52540 550 700 1.58E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 PANTHER PTHR23077 317 480 1.5E-23 T 22-04-2016 RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 PANTHER PTHR23077 527 698 1.5E-23 T 22-04-2016 RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 Gene3D G3DSA:3.40.50.300 523 708 1.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10405 0e92fcb2f0610ac0d48c48b7e725f109 773 Gene3D G3DSA:3.40.50.300 301 480 8.4E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07125 1771390447e60496259d6c37f3c99a0c 282 SUPERFAMILY SSF53639 41 265 4.91E-71 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS07125 1771390447e60496259d6c37f3c99a0c 282 Gene3D G3DSA:3.40.225.10 43 263 1.7E-69 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS07125 1771390447e60496259d6c37f3c99a0c 282 PANTHER PTHR10672:SF17 29 277 3.0E-133 T 22-04-2016 RPIC_RS07125 1771390447e60496259d6c37f3c99a0c 282 SMART SM01007 48 228 1.3E-63 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS07125 1771390447e60496259d6c37f3c99a0c 282 PANTHER PTHR10672 29 277 3.0E-133 T 22-04-2016 RPIC_RS07125 1771390447e60496259d6c37f3c99a0c 282 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 48 228 2.5E-52 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS12205 296839882c9c78765299b5b049756bed 438 Pfam PF01595 Domain of unknown function DUF21 5 195 1.1E-42 T 22-04-2016 IPR002550 Domain of unknown function DUF21 RPIC_RS12205 296839882c9c78765299b5b049756bed 438 Gene3D G3DSA:3.10.580.10 197 335 1.7E-15 T 22-04-2016 RPIC_RS12205 296839882c9c78765299b5b049756bed 438 SUPERFAMILY SSF56176 345 426 3.0E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS12205 296839882c9c78765299b5b049756bed 438 Pfam PF03471 Transporter associated domain 348 425 1.2E-19 T 22-04-2016 IPR005170 Transporter-associated domain RPIC_RS12205 296839882c9c78765299b5b049756bed 438 SMART SM01091 347 427 2.4E-26 T 22-04-2016 IPR005170 Transporter-associated domain RPIC_RS12205 296839882c9c78765299b5b049756bed 438 SUPERFAMILY SSF54631 198 337 3.42E-22 T 22-04-2016 RPIC_RS12205 296839882c9c78765299b5b049756bed 438 PANTHER PTHR22777:SF16 4 425 1.5E-167 T 22-04-2016 RPIC_RS12205 296839882c9c78765299b5b049756bed 438 PANTHER PTHR22777 4 425 1.5E-167 T 22-04-2016 RPIC_RS12205 296839882c9c78765299b5b049756bed 438 Pfam PF00571 CBS domain 285 334 5.8E-6 T 22-04-2016 IPR000644 CBS domain RPIC_RS12205 296839882c9c78765299b5b049756bed 438 Gene3D G3DSA:3.30.465.10 342 425 2.4E-24 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 Gene3D G3DSA:3.40.50.880 1 186 8.9E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 PANTHER PTHR11019:SF112 111 144 1.4E-55 T 22-04-2016 RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 PANTHER PTHR11019:SF112 3 93 1.4E-55 T 22-04-2016 RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 186 1.2E-57 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 Pfam PF01965 DJ-1/PfpI family 3 184 1.5E-53 T 22-04-2016 IPR002818 DJ-1/PfpI RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 PANTHER PTHR11019 111 144 1.4E-55 T 22-04-2016 RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 PANTHER PTHR11019 3 93 1.4E-55 T 22-04-2016 RPIC_RS01325 d75059b1e0cc5a3556e9f7f39f29e063 192 SUPERFAMILY SSF52317 3 187 5.02E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 1.5E-57 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 Gene3D G3DSA:3.30.930.10 1 216 6.7E-103 T 22-04-2016 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 315 5.6E-148 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 308 1.7E-143 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 309 60.15 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 SUPERFAMILY SSF55681 3 308 3.87E-124 T 22-04-2016 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 Gene3D G3DSA:1.20.58.180 218 314 1.4E-34 T 22-04-2016 RPIC_RS01975 969fc0c9c7af4b58880ca0e23eab7d72 328 PANTHER PTHR30075 2 315 1.4E-225 T 22-04-2016 RPIC_RS16215 cd26189dc72d81653b8f5bfd819d589d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.654 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid RPIC_RS16215 cd26189dc72d81653b8f5bfd819d589d 101 Gene3D G3DSA:4.10.830.10 41 101 7.6E-30 T 22-04-2016 RPIC_RS16215 cd26189dc72d81653b8f5bfd819d589d 101 PANTHER PTHR19836 2 101 4.6E-53 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16215 cd26189dc72d81653b8f5bfd819d589d 101 SUPERFAMILY SSF57716 2 101 2.14E-37 T 22-04-2016 RPIC_RS16215 cd26189dc72d81653b8f5bfd819d589d 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.1E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS14585 bf6b7a9eef9136a6ee68d4bd56688212 190 SMART SM00867 28 188 1.1E-44 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14585 bf6b7a9eef9136a6ee68d4bd56688212 190 SUPERFAMILY SSF101874 30 189 4.84E-41 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14585 bf6b7a9eef9136a6ee68d4bd56688212 190 Gene3D G3DSA:2.40.128.110 30 189 1.1E-41 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14585 bf6b7a9eef9136a6ee68d4bd56688212 190 Pfam PF04264 YceI-like domain 30 186 7.0E-33 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RPIC_RS14585 bf6b7a9eef9136a6ee68d4bd56688212 190 PANTHER PTHR34406 1 187 3.0E-26 T 22-04-2016 RPIC_RS14585 bf6b7a9eef9136a6ee68d4bd56688212 190 PANTHER PTHR34406:SF1 1 187 3.0E-26 T 22-04-2016 RPIC_RS01160 8d3c0eb1889bfb161d7e9d3cf951129a 233 SUPERFAMILY SSF56529 22 232 5.76E-70 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS01160 8d3c0eb1889bfb161d7e9d3cf951129a 233 PANTHER PTHR11820 25 232 4.3E-87 T 22-04-2016 RPIC_RS01160 8d3c0eb1889bfb161d7e9d3cf951129a 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 232 2.9E-52 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS01160 8d3c0eb1889bfb161d7e9d3cf951129a 233 Gene3D G3DSA:3.90.850.10 23 232 6.6E-80 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS01160 8d3c0eb1889bfb161d7e9d3cf951129a 233 PANTHER PTHR11820:SF7 25 232 4.3E-87 T 22-04-2016 RPIC_RS06060 7796fb4875acb54cb7725a2c3bede1a6 224 Pfam PF06821 Serine hydrolase 23 194 2.7E-58 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- RPIC_RS06060 7796fb4875acb54cb7725a2c3bede1a6 224 SUPERFAMILY SSF53474 22 192 4.92E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06060 7796fb4875acb54cb7725a2c3bede1a6 224 Gene3D G3DSA:3.40.50.1820 21 196 1.5E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 142 24.902 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 SUPERFAMILY SSF81330 12 135 3.14E-35 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 PANTHER PTHR30266 1 142 7.0E-45 T 22-04-2016 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.1E-10 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 1.1E-10 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 1.1E-10 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 PANTHER PTHR30266:SF2 1 142 7.0E-45 T 22-04-2016 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 141 6.8E-38 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS15825 16ba0ff3c0038a963a68f71ca4922eea 142 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 139 7.8E-43 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 Pfam PF00106 short chain dehydrogenase 7 202 2.0E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.2E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 2.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 PANTHER PTHR24320 1 197 8.2E-51 T 22-04-2016 RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 Gene3D G3DSA:3.40.50.720 6 246 5.9E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 SUPERFAMILY SSF51735 1 277 9.25E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16640 079d7b891bb753b04671c49187f89355 296 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 196 1.0E-4 T 22-04-2016 RPIC_RS07135 b35d81c709e8f0420dc43f3bde9661f8 467 Pfam PF00144 Beta-lactamase 157 442 4.4E-38 T 22-04-2016 IPR001466 Beta-lactamase-related RPIC_RS07135 b35d81c709e8f0420dc43f3bde9661f8 467 PANTHER PTHR22935 142 461 1.3E-116 T 22-04-2016 RPIC_RS07135 b35d81c709e8f0420dc43f3bde9661f8 467 Gene3D G3DSA:3.40.710.10 147 439 2.6E-52 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS07135 b35d81c709e8f0420dc43f3bde9661f8 467 PANTHER PTHR22935:SF2 142 461 1.3E-116 T 22-04-2016 RPIC_RS07135 b35d81c709e8f0420dc43f3bde9661f8 467 SUPERFAMILY SSF56601 90 463 1.59E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS04490 a3198419eae09065893d87cabd3538fc 59 Pfam PF01783 Ribosomal L32p protein family 2 55 8.4E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RPIC_RS04490 a3198419eae09065893d87cabd3538fc 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.4E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RPIC_RS04490 a3198419eae09065893d87cabd3538fc 59 SUPERFAMILY SSF57829 2 55 1.71E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 RPIC_RS04490 a3198419eae09065893d87cabd3538fc 59 PANTHER PTHR35534 1 59 5.5E-25 T 22-04-2016 RPIC_RS04490 a3198419eae09065893d87cabd3538fc 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.62 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 SUPERFAMILY SSF69737 77 144 3.4E-21 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 24.795 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 SMART SM00988 7 71 1.1E-19 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 182 9.0E-16 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 SUPERFAMILY SSF69287 1 77 7.59E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 Gene3D G3DSA:2.60.260.20 23 77 1.5E-18 T 22-04-2016 RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 Pfam PF02814 UreE urease accessory protein, N-terminal domain 18 71 4.4E-19 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal RPIC_RS10730 32eaf4d15ff824bdaf1caab2b505ed41 208 Gene3D G3DSA:3.30.70.790 78 149 1.1E-31 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 SUPERFAMILY SSF50249 40 113 6.85E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 PANTHER PTHR33991 38 273 7.1E-47 T 22-04-2016 RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 Pfam PF11967 Recombination protein O N terminal 42 114 4.2E-23 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 Pfam PF02565 Recombination protein O C terminal 121 264 2.6E-18 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 Gene3D G3DSA:2.40.50.140 38 113 6.7E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 Hamap MF_00201 DNA repair protein RecO [recO]. 38 270 22.138 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 TIGRFAM TIGR00613 reco: DNA repair protein RecO 44 189 7.1E-27 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RPIC_RS04575 280117988fff0e5726f1df8baab0d4ff 273 SUPERFAMILY SSF57863 125 256 7.06E-10 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 SUPERFAMILY SSF52374 40 367 7.51E-95 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 SUPERFAMILY SSF50715 362 573 3.61E-74 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Gene3D G3DSA:2.40.240.10 486 572 3.5E-35 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Gene3D G3DSA:3.90.800.10 118 226 8.4E-44 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Gene3D G3DSA:3.40.50.620 229 283 8.6E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Gene3D G3DSA:3.40.50.620 41 109 8.6E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 362 553 1.3E-56 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PANTHER PTHR11451 289 576 3.1E-214 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PANTHER PTHR11451 41 264 3.1E-214 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 227 237 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 56 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 58 69 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PRINTS PR00987 Glutamyl-tRNA synthetase signature 73 86 3.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 41 576 2.1E-227 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Gene3D G3DSA:2.40.240.10 370 485 1.0E-46 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 574 53.061 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Gene3D G3DSA:1.10.1160.10 284 360 4.9E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PANTHER PTHR11451:SF29 289 576 3.1E-214 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 PANTHER PTHR11451:SF29 41 264 3.1E-214 T 22-04-2016 RPIC_RS03615 83c484450e70a001abb2903504b9413b 576 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 41 356 1.2E-105 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 Gene3D G3DSA:3.40.50.620 19 83 3.8E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 Gene3D G3DSA:3.40.50.620 201 250 3.8E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PANTHER PTHR11451 12 261 4.2E-83 T 22-04-2016 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 Gene3D G3DSA:3.90.800.10 84 199 4.9E-17 T 22-04-2016 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 SUPERFAMILY SSF52374 18 285 9.12E-83 T 22-04-2016 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 19 314 42.747 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 20 268 1.6E-44 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 51 64 9.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 34 9.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 47 9.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 215 223 9.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 209 9.5E-14 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 19 287 2.0E-116 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 RPIC_RS11865 1f8ea78754d963ccde16644d4f321014 314 PANTHER PTHR11451:SF35 12 261 4.2E-83 T 22-04-2016 RPIC_RS08260 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Pfam PF00665 Integrase core domain 241 378 9.0E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS08260 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Pfam PF09299 Mu transposase, C-terminal 462 526 1.2E-11 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal RPIC_RS08260 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Gene3D G3DSA:3.30.420.10 238 432 1.1E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS08260 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Gene3D G3DSA:1.10.10.60 162 223 1.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS08260 4bbb74f7c70f9dfb4736fd3fa6efa295 640 SUPERFAMILY SSF53098 235 433 2.58E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS14455 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Pfam PF00665 Integrase core domain 241 378 9.0E-13 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS14455 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Pfam PF09299 Mu transposase, C-terminal 462 526 1.2E-11 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal RPIC_RS14455 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Gene3D G3DSA:3.30.420.10 238 432 1.1E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS14455 4bbb74f7c70f9dfb4736fd3fa6efa295 640 Gene3D G3DSA:1.10.10.60 162 223 1.2E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS14455 4bbb74f7c70f9dfb4736fd3fa6efa295 640 SUPERFAMILY SSF53098 235 433 2.58E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PANTHER PTHR24322 169 201 4.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PANTHER PTHR24322 14 138 4.0E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 6.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 SUPERFAMILY SSF51735 5 260 5.51E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 260 1.5E-58 T 22-04-2016 RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 1.5E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 Gene3D G3DSA:3.40.50.720 6 261 8.8E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09765 bd3b03d86afc08a035eaff1c28d4b050 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 190 0.0036 T 22-04-2016 RPIC_RS04245 58ae30dad479e36ac93b939ffe9a8489 297 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 193 2.9E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS04245 58ae30dad479e36ac93b939ffe9a8489 297 SUPERFAMILY SSF52540 20 259 8.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04245 58ae30dad479e36ac93b939ffe9a8489 297 PANTHER PTHR22908 16 250 2.5E-71 T 22-04-2016 RPIC_RS04245 58ae30dad479e36ac93b939ffe9a8489 297 Gene3D G3DSA:3.40.50.300 29 214 1.2E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04245 58ae30dad479e36ac93b939ffe9a8489 297 SMART SM00382 38 200 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 Gene3D G3DSA:3.40.50.620 257 265 1.0E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 Gene3D G3DSA:3.40.50.620 14 224 1.0E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 269 1.3E-46 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PIRSF PIRSF002936 11 316 3.2E-136 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PANTHER PTHR23293 258 316 4.0E-67 T 22-04-2016 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PANTHER PTHR23293 16 172 4.0E-67 T 22-04-2016 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PANTHER PTHR23293 192 225 4.0E-67 T 22-04-2016 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PANTHER PTHR23293:SF6 258 316 4.0E-67 T 22-04-2016 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PANTHER PTHR23293:SF6 16 172 4.0E-67 T 22-04-2016 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 PANTHER PTHR23293:SF6 192 225 4.0E-67 T 22-04-2016 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 20 316 1.7E-119 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 RPIC_RS13230 317eaee08c3640a2ebcef5c7ab50e427 316 SUPERFAMILY SSF52402 16 224 1.51E-62 T 22-04-2016 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 SUPERFAMILY SSF69065 2 154 1.27E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 SUPERFAMILY SSF54768 106 220 1.19E-24 T 22-04-2016 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 Gene3D G3DSA:1.10.1520.10 2 145 2.1E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 Gene3D G3DSA:3.30.160.20 150 218 7.5E-24 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 28.813 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 PANTHER PTHR11207 3 218 6.2E-78 T 22-04-2016 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 Pfam PF14622 Ribonuclease-III-like 17 138 4.6E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 SMART SM00535 18 146 1.6E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 SMART SM00358 153 221 5.4E-14 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 218 3.9E-71 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 RPIC_RS04565 c4393cf219308fcb24d040c124128fb9 256 Pfam PF00035 Double-stranded RNA binding motif 153 218 6.5E-12 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain RPIC_RS01615 98398dbce8873543a9bac71f33805634 145 PANTHER PTHR23089 25 131 1.2E-19 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RPIC_RS01615 98398dbce8873543a9bac71f33805634 145 Pfam PF01230 HIT domain 23 102 6.5E-13 T 22-04-2016 IPR001310 Histidine triad (HIT) protein RPIC_RS01615 98398dbce8873543a9bac71f33805634 145 Gene3D G3DSA:3.30.428.10 3 131 5.4E-40 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RPIC_RS01615 98398dbce8873543a9bac71f33805634 145 PANTHER PTHR23089:SF13 25 131 1.2E-19 T 22-04-2016 RPIC_RS01615 98398dbce8873543a9bac71f33805634 145 PIRSF PIRSF000714 5 144 2.4E-40 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type RPIC_RS01615 98398dbce8873543a9bac71f33805634 145 SUPERFAMILY SSF54197 6 126 1.38E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 20 443 32.35 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 SUPERFAMILY SSF52954 344 443 9.32E-20 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 Gene3D G3DSA:3.40.50.800 343 442 5.1E-30 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 PIRSF PIRSF001549 19 445 7.8E-111 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 25 422 3.0E-150 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 PANTHER PTHR11476:SF9 1 449 6.1E-195 T 22-04-2016 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 Gene3D G3DSA:3.30.930.10 238 341 2.2E-90 T 22-04-2016 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 Gene3D G3DSA:3.30.930.10 22 202 2.2E-90 T 22-04-2016 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 SUPERFAMILY SSF55681 24 335 1.32E-97 T 22-04-2016 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 Pfam PF03129 Anticodon binding domain 347 442 4.2E-10 T 22-04-2016 IPR004154 Anticodon-binding RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 Pfam PF13393 Histidyl-tRNA synthetase 27 329 2.1E-46 T 22-04-2016 RPIC_RS05265 e10c78e992cfd2038f48d0993c41c929 450 PANTHER PTHR11476 1 449 6.1E-195 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 RPIC_RS08695 233168e64a4290b5a1e9249c29cf8646 330 Pfam PF11740 Plasmid replication region DNA-binding N-term 10 119 3.3E-23 T 22-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain RPIC_RS15800 d39c0993513b1e9069af7b586f30eef1 165 PANTHER PTHR37486 1 165 2.6E-47 T 22-04-2016 RPIC_RS15800 d39c0993513b1e9069af7b586f30eef1 165 PANTHER PTHR37486:SF1 1 165 2.6E-47 T 22-04-2016 RPIC_RS15800 d39c0993513b1e9069af7b586f30eef1 165 PIRSF PIRSF005276 1 165 2.3E-53 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC_RS15800 d39c0993513b1e9069af7b586f30eef1 165 Pfam PF04386 Stringent starvation protein B 5 165 7.3E-37 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC_RS15800 d39c0993513b1e9069af7b586f30eef1 165 SUPERFAMILY SSF101738 2 116 4.32E-46 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC_RS15800 d39c0993513b1e9069af7b586f30eef1 165 Gene3D G3DSA:2.30.30.220 2 105 3.1E-48 T 22-04-2016 IPR007481 Stringent starvation protein B RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 PANTHER PTHR11649 15 312 3.6E-105 T 22-04-2016 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 Pfam PF07650 KH domain 224 299 4.6E-16 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 Gene3D G3DSA:3.40.50.300 23 207 2.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 92 110 2.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 44 2.5E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 TIGRFAM TIGR00436 era: GTP-binding protein Era 22 294 3.1E-81 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 Hamap MF_00367 GTPase Era [era]. 19 311 34.619 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 Pfam PF01926 50S ribosome-binding GTPase 24 137 2.0E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 SUPERFAMILY SSF52540 24 221 9.64E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 Gene3D G3DSA:3.30.300.20 208 307 1.5E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 PANTHER PTHR11649:SF3 15 312 3.6E-105 T 22-04-2016 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 SUPERFAMILY SSF54814 198 312 7.19E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC_RS04570 14efa24deb5a0a0559dc1e7b315b4036 312 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 185 1.0E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 Gene3D G3DSA:3.90.1550.10 5 192 1.1E-62 T 22-04-2016 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 Hamap MF_00013 Octanoyltransferase [lipB]. 3 218 35.307 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 159 2.3E-5 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 PIRSF PIRSF016262 1 227 1.2E-53 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 SUPERFAMILY SSF55681 4 185 4.64E-59 T 22-04-2016 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 25 183 1.7E-53 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 PANTHER PTHR10993 4 203 3.9E-63 T 22-04-2016 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 126 1.0E-22 T 22-04-2016 RPIC_RS00865 eba140e62ec679ed3035d6ebcc11f7e6 229 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 Gene3D G3DSA:1.10.260.40 28 104 7.1E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 Pfam PF13464 Domain of unknown function (DUF4115) 285 359 4.4E-21 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 PANTHER PTHR34475 24 360 1.1E-35 T 22-04-2016 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 PANTHER PTHR34475:SF1 24 360 1.1E-35 T 22-04-2016 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 SUPERFAMILY SSF47413 35 102 1.27E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 Pfam PF13413 Helix-turn-helix domain 40 100 6.3E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS05255 c3e997eef6f38539f392a79915d3bc2d 360 SMART SM00530 40 101 0.0029 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 Pfam PF02709 N-terminal domain of galactosyltransferase 183 242 4.7E-15 T 22-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 PANTHER PTHR22916:SF31 176 230 2.2E-42 T 22-04-2016 RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 PANTHER PTHR22916:SF31 9 150 2.2E-42 T 22-04-2016 RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 SUPERFAMILY SSF53448 180 261 2.25E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 SUPERFAMILY SSF53448 7 130 2.25E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 Gene3D G3DSA:3.90.550.10 181 277 2.1E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 Gene3D G3DSA:3.90.550.10 4 145 2.1E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 PANTHER PTHR22916 176 230 2.2E-42 T 22-04-2016 RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 PANTHER PTHR22916 9 150 2.2E-42 T 22-04-2016 RPIC_RS11820 8c086410223fe8570997ed2cd50496e2 280 Pfam PF00535 Glycosyl transferase family 2 12 118 3.8E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS08380 962d0e817a0f776949c616a35079a672 104 Pfam PF11666 Protein of unknown function (DUF2933) 23 73 7.5E-22 T 22-04-2016 IPR021682 Protein of unknown function DUF2933 RPIC_RS24850 274641d20ca4ac8d4ab8cc7d5df260e4 137 Pfam PF01734 Patatin-like phospholipase 72 115 1.0E-11 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC_RS24850 274641d20ca4ac8d4ab8cc7d5df260e4 137 SUPERFAMILY SSF52151 13 126 7.32E-30 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS24850 274641d20ca4ac8d4ab8cc7d5df260e4 137 Gene3D G3DSA:3.40.1090.10 25 116 4.7E-13 T 22-04-2016 RPIC_RS24850 274641d20ca4ac8d4ab8cc7d5df260e4 137 PANTHER PTHR14226 1 124 2.9E-23 T 22-04-2016 RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 1.1E-18 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 Gene3D G3DSA:3.40.30.10 1 88 1.9E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 SUPERFAMILY SSF47616 73 201 1.21E-26 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 Gene3D G3DSA:1.20.1050.10 89 200 4.6E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 189 9.9E-13 T 22-04-2016 RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 PANTHER PTHR11260:SF256 1 201 1.8E-48 T 22-04-2016 RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 PANTHER PTHR11260 1 201 1.8E-48 T 22-04-2016 RPIC_RS14600 48ca520f2a6987f2238547fec9e031d4 202 SUPERFAMILY SSF52833 1 100 1.95E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08590 029ce97341aa7e99955237eeeda20d1b 373 PANTHER PTHR10859:SF86 11 312 1.2E-143 T 22-04-2016 RPIC_RS08590 029ce97341aa7e99955237eeeda20d1b 373 Pfam PF00535 Glycosyl transferase family 2 12 172 9.0E-32 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS08590 029ce97341aa7e99955237eeeda20d1b 373 Gene3D G3DSA:3.90.550.10 10 182 2.5E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS08590 029ce97341aa7e99955237eeeda20d1b 373 PANTHER PTHR10859 11 312 1.2E-143 T 22-04-2016 RPIC_RS08590 029ce97341aa7e99955237eeeda20d1b 373 SUPERFAMILY SSF53448 11 254 3.88E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 SUPERFAMILY SSF161098 389 579 4.06E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 271 6.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 409 592 6.7E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 PANTHER PTHR30151 386 591 6.5E-158 T 22-04-2016 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 PANTHER PTHR30151 84 242 6.5E-158 T 22-04-2016 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 PANTHER PTHR30151:SF10 386 591 6.5E-158 T 22-04-2016 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 PANTHER PTHR30151:SF10 84 242 6.5E-158 T 22-04-2016 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 Gene3D G3DSA:1.10.3720.10 81 271 2.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 Gene3D G3DSA:1.10.3720.10 391 580 3.3E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS17695 28d4ef857a13080ead08a3c7a8d40c5d 594 SUPERFAMILY SSF161098 79 275 6.93E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS03875 f72832e80a4fc9f65fd72986339379d6 217 PANTHER PTHR30450:SF1 1 217 7.5E-114 T 22-04-2016 RPIC_RS03875 f72832e80a4fc9f65fd72986339379d6 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 1.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS03875 f72832e80a4fc9f65fd72986339379d6 217 Gene3D G3DSA:1.10.3720.10 7 215 4.2E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS03875 f72832e80a4fc9f65fd72986339379d6 217 SUPERFAMILY SSF161098 7 211 3.92E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS03875 f72832e80a4fc9f65fd72986339379d6 217 PANTHER PTHR30450 1 217 7.5E-114 T 22-04-2016 RPIC_RS13710 e50218e59d210a12fb4eaec3b29902ca 403 Pfam PF13487 HD domain 212 274 8.9E-13 T 22-04-2016 RPIC_RS13710 e50218e59d210a12fb4eaec3b29902ca 403 SMART SM00471 157 293 1.3E-9 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS13710 e50218e59d210a12fb4eaec3b29902ca 403 Pfam PF11871 Domain of unknown function (DUF3391) 3 130 9.6E-34 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 RPIC_RS13710 e50218e59d210a12fb4eaec3b29902ca 403 Gene3D G3DSA:1.10.3210.10 151 300 5.9E-23 T 22-04-2016 IPR006674 HD domain RPIC_RS13710 e50218e59d210a12fb4eaec3b29902ca 403 SUPERFAMILY SSF109604 153 322 4.04E-36 T 22-04-2016 RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 17 431 5.8E-172 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 PANTHER PTHR23150 16 434 9.3E-110 T 22-04-2016 RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 Pfam PF12867 DinB superfamily 24 149 2.8E-12 T 22-04-2016 IPR024775 DinB-like domain RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 SUPERFAMILY SSF56436 183 432 2.07E-70 T 22-04-2016 IPR016187 C-type lectin fold RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 Gene3D G3DSA:3.90.1580.10 176 433 4.0E-63 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 SUPERFAMILY SSF109854 11 149 1.31E-5 T 22-04-2016 RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 PANTHER PTHR23150:SF24 16 434 9.3E-110 T 22-04-2016 RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 185 330 1.1E-26 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC_RS07030 e45716da0b052de03439c98834cecd50 434 Pfam PF03781 Sulfatase-modifying factor enzyme 1 355 432 1.7E-8 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 SMART SM00244 21 179 4.4E-58 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PANTHER PTHR10264 9 303 9.9E-137 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 Pfam PF01145 SPFH domain / Band 7 family 25 195 5.6E-30 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 Pfam PF16200 C-terminal region of band_7 244 303 1.2E-26 T 22-04-2016 IPR032435 Band 7, C-terminal extension RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PRINTS PR00721 Stomatin signature 76 97 4.4E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PRINTS PR00721 Stomatin signature 174 195 4.4E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PRINTS PR00721 Stomatin signature 28 50 4.4E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PRINTS PR00721 Stomatin signature 111 128 4.4E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PRINTS PR00721 Stomatin signature 131 154 4.4E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PRINTS PR00721 Stomatin signature 155 173 4.4E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 SUPERFAMILY SSF117892 52 186 1.31E-39 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS06460 8bca10e536964f7fe251b0dbc127cd30 308 PANTHER PTHR10264:SF27 9 303 9.9E-137 T 22-04-2016 RPIC_RS03165 5455f4f0c61cc79ca9d48da53c9ef831 63 PANTHER PTHR36931 1 61 2.7E-21 T 22-04-2016 RPIC_RS18065 687417d7127a0a972bf731aef10b51ae 71 Pfam PF02597 ThiS family 13 71 9.3E-11 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 RPIC_RS18065 687417d7127a0a972bf731aef10b51ae 71 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 71 1.9E-10 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis RPIC_RS18065 687417d7127a0a972bf731aef10b51ae 71 Gene3D G3DSA:3.10.20.30 4 71 3.0E-15 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS18065 687417d7127a0a972bf731aef10b51ae 71 SUPERFAMILY SSF54285 3 71 5.37E-10 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RPIC_RS04870 c40ba6b29d71ae53a3361f0b1cf16f3e 188 SUPERFAMILY SSF53335 12 166 4.62E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04870 c40ba6b29d71ae53a3361f0b1cf16f3e 188 Pfam PF13649 Methyltransferase domain 31 106 5.3E-8 T 22-04-2016 RPIC_RS04870 c40ba6b29d71ae53a3361f0b1cf16f3e 188 Gene3D G3DSA:3.40.50.150 11 162 1.9E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 Gene3D G3DSA:3.90.1150.10 309 425 2.7E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 Pfam PF00202 Aminotransferase class-III 28 424 1.7E-127 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 PANTHER PTHR11986:SF70 14 425 5.6E-190 T 22-04-2016 RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 SUPERFAMILY SSF53383 28 425 5.51E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 15 424 1.2E-191 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 Gene3D G3DSA:3.40.640.10 64 308 1.5E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 PANTHER PTHR11986 14 425 5.6E-190 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS18460 72a9b735d4f85a4223bbd787385c26b6 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RPIC_RS11010 9f4c9b2fd45884784be7f81cf9ea6347 194 PANTHER PTHR31223 1 189 3.9E-88 T 22-04-2016 RPIC_RS11010 9f4c9b2fd45884784be7f81cf9ea6347 194 Gene3D G3DSA:3.40.50.450 2 186 2.7E-75 T 22-04-2016 RPIC_RS11010 9f4c9b2fd45884784be7f81cf9ea6347 194 Pfam PF03641 Possible lysine decarboxylase 46 174 4.4E-46 T 22-04-2016 IPR031100 LOG family RPIC_RS11010 9f4c9b2fd45884784be7f81cf9ea6347 194 SUPERFAMILY SSF102405 1 177 7.63E-64 T 22-04-2016 RPIC_RS11010 9f4c9b2fd45884784be7f81cf9ea6347 194 PANTHER PTHR31223:SF0 1 189 3.9E-88 T 22-04-2016 RPIC_RS11010 9f4c9b2fd45884784be7f81cf9ea6347 194 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 176 1.7E-65 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 PIRSF PIRSF000013 1 195 6.1E-105 T 22-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 PANTHER PTHR30333 1 189 1.6E-112 T 22-04-2016 RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 SUPERFAMILY SSF48695 13 192 4.75E-65 T 22-04-2016 IPR011031 Multihaem cytochrome RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 5 190 1.2E-98 T 22-04-2016 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 189 1.1E-75 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 Gene3D G3DSA:1.10.3820.10 16 189 7.5E-27 T 22-04-2016 RPIC_RS14020 65176ecd2ef15c13e36042215ab8327f 195 PANTHER PTHR30333:SF1 1 189 1.6E-112 T 22-04-2016 RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 SUPERFAMILY SSF52172 18 207 8.75E-42 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 Gene3D G3DSA:3.40.50.2300 12 148 1.3E-12 T 22-04-2016 RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 PANTHER PTHR26402:SF567 21 206 3.1E-33 T 22-04-2016 RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 PANTHER PTHR26402 21 206 3.1E-33 T 22-04-2016 RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 SMART SM01012 152 207 3.3E-24 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 Gene3D G3DSA:1.10.10.10 156 210 7.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 PIRSF PIRSF036382 13 212 3.3E-60 T 22-04-2016 IPR008327 Signal transduction response regulator, antiterminator RPIC_RS01155 57cd51a5250d08646911be0732264a7e 212 Pfam PF03861 ANTAR domain 156 207 8.5E-20 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 RPIC_RS14670 d8b698075af1e4769436a41ccd87d631 140 PANTHER PTHR40255 1 140 1.3E-38 T 22-04-2016 RPIC_RS14670 d8b698075af1e4769436a41ccd87d631 140 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 140 2.7E-42 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 RPIC_RS14670 d8b698075af1e4769436a41ccd87d631 140 PIRSF PIRSF004638 1 140 3.6E-47 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 PANTHER PTHR10884 25 178 1.0E-68 T 22-04-2016 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 8.0E-28 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 1.8E-44 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 159 7.4E-42 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 SUPERFAMILY SSF143243 8 181 4.97E-58 T 22-04-2016 RPIC_RS10875 0b92390dfe281356b279ed23dffb6d70 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 35.207 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 RPIC_RS06510 30bb430212ae0e46f64702092d2d0206 214 SUPERFAMILY SSF50969 16 209 1.26E-26 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RPIC_RS06510 30bb430212ae0e46f64702092d2d0206 214 Gene3D G3DSA:2.130.10.10 16 205 4.7E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 PANTHER PTHR24220 3 192 1.6E-60 T 22-04-2016 RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 SUPERFAMILY SSF52540 5 206 6.59E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 Pfam PF00005 ABC transporter 18 162 5.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 Gene3D G3DSA:3.40.50.300 2 204 9.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 204 8.0E-58 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 PANTHER PTHR24220:SF508 3 192 1.6E-60 T 22-04-2016 RPIC_RS14025 d21dd03cca03beeba4ee170b22af7f1d 210 SMART SM00382 26 209 4.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 SMART SM00278 108 127 0.0016 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 SMART SM00278 73 92 10.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 SUPERFAMILY SSF46929 151 192 9.94E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Gene3D G3DSA:2.40.50.140 1 65 5.7E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 PANTHER PTHR33796 2 193 1.2E-71 T 22-04-2016 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Gene3D G3DSA:1.10.8.10 151 190 1.4E-7 T 22-04-2016 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Gene3D G3DSA:1.10.150.20 67 133 7.6E-29 T 22-04-2016 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 189 8.4E-53 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 9.7E-18 T 22-04-2016 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 SUPERFAMILY SSF50249 1 63 8.57E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Pfam PF01330 RuvA N terminal domain 1 62 3.5E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Pfam PF07499 RuvA, C-terminal domain 151 191 3.8E-12 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 31.2 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RPIC_RS01850 f28b75d3269e34a892251a34f9d9e810 193 SUPERFAMILY SSF47781 65 132 2.19E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS05440 e322d9ca93329760d825ce6c29bc6afa 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 277 1.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05440 e322d9ca93329760d825ce6c29bc6afa 282 PANTHER PTHR32243:SF31 1 280 4.4E-128 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 RPIC_RS05440 e322d9ca93329760d825ce6c29bc6afa 282 PANTHER PTHR32243 1 280 4.4E-128 T 22-04-2016 RPIC_RS05440 e322d9ca93329760d825ce6c29bc6afa 282 Gene3D G3DSA:1.10.3720.10 4 271 1.1E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS05440 e322d9ca93329760d825ce6c29bc6afa 282 SUPERFAMILY SSF161098 4 278 1.4E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PANTHER PTHR11406 84 472 3.4E-164 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 Pfam PF00162 Phosphoglycerate kinase 141 472 2.1E-119 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 SUPERFAMILY SSF53748 139 470 2.12E-117 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 148 158 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 Gene3D G3DSA:3.40.50.1270 309 474 1.8E-62 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 Gene3D G3DSA:3.40.50.1260 139 308 3.7E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 442 467 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 143 159 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 297 319 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 238 253 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 320 339 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 266 288 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS20975 e6cefc94fd938e4264682984468389a0 475 PRINTS PR00477 Phosphoglycerate kinase family signature 165 187 2.8E-61 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS06000 850db4d9250309634b7c168ca07c5312 126 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 5.7E-27 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIC_RS06000 850db4d9250309634b7c168ca07c5312 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 123 17.246 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIC_RS06000 850db4d9250309634b7c168ca07c5312 126 PANTHER PTHR28259 4 125 5.0E-32 T 22-04-2016 RPIC_RS06000 850db4d9250309634b7c168ca07c5312 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 118 3.9E-20 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Gene3D G3DSA:1.10.3710.10 332 428 4.7E-33 T 22-04-2016 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 40 146 5.3E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 PANTHER PTHR13779 1 435 1.5E-180 T 22-04-2016 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 SMART SM00382 36 152 2.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Gene3D G3DSA:3.40.50.300 2 140 4.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Gene3D G3DSA:1.10.8.60 141 212 5.4E-8 T 22-04-2016 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 SUPERFAMILY SSF48019 235 417 1.7E-72 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Pfam PF16193 AAA C-terminal domain 171 250 1.2E-20 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 SUPERFAMILY SSF52540 2 205 1.12E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 417 1.0E-65 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 Gene3D G3DSA:1.20.272.10 232 330 3.3E-43 T 22-04-2016 RPIC_RS12565 cd7ccb474632b95cb55975dac91da4de 435 PANTHER PTHR13779:SF7 1 435 1.5E-180 T 22-04-2016 RPIC_RS00915 9a0fad665130c7dde59510b5550fae40 245 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 2 234 1.9E-48 T 22-04-2016 IPR019268 Protein of unknown function DUF2278 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 Gene3D G3DSA:1.20.120.640 312 392 1.5E-21 T 22-04-2016 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 SMART SM00840 348 403 1.1E-23 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 SUPERFAMILY SSF47323 321 461 9.42E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 Pfam PF09190 DALR domain 348 403 6.1E-16 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 1.65E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 1.65E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 1.65E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 1.65E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 462 39.065 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 Gene3D G3DSA:3.40.50.620 21 310 6.2E-109 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 SUPERFAMILY SSF52374 4 318 4.1E-98 T 22-04-2016 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 317 1.8E-130 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 PANTHER PTHR10890 4 463 5.1E-235 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RPIC_RS04985 46f106dd9bcd015a195a5f4c65d96634 463 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 462 5.2E-173 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 RPIC_RS03705 21fb82a6659c840f46437476879879d5 193 PANTHER PTHR22769 5 147 8.1E-23 T 22-04-2016 RPIC_RS03705 21fb82a6659c840f46437476879879d5 193 ProSitePatterns PS00893 Nudix box signature. 73 94 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RPIC_RS03705 21fb82a6659c840f46437476879879d5 193 SUPERFAMILY SSF55811 3 166 1.9E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS03705 21fb82a6659c840f46437476879879d5 193 Gene3D G3DSA:3.90.79.10 31 144 3.3E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS03705 21fb82a6659c840f46437476879879d5 193 Pfam PF00293 NUDIX domain 48 143 7.1E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS01830 b7030d7fb6b236c13cc4a3f0d41fe245 170 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 148 3.4E-49 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC_RS01830 b7030d7fb6b236c13cc4a3f0d41fe245 170 SUPERFAMILY SSF69500 4 149 1.16E-50 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RPIC_RS01830 b7030d7fb6b236c13cc4a3f0d41fe245 170 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 150 33.304 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC_RS01830 b7030d7fb6b236c13cc4a3f0d41fe245 170 Gene3D G3DSA:3.50.80.10 4 149 2.0E-51 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain RPIC_RS01830 b7030d7fb6b236c13cc4a3f0d41fe245 170 PANTHER PTHR10472 2 149 2.7E-63 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC_RS01830 b7030d7fb6b236c13cc4a3f0d41fe245 170 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 150 5.7E-53 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 Pfam PF01565 FAD binding domain 54 192 1.8E-42 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 SUPERFAMILY SSF55103 203 472 3.43E-72 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 PANTHER PTHR11748 12 478 3.6E-184 T 22-04-2016 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 PANTHER PTHR11748:SF78 12 478 3.6E-184 T 22-04-2016 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 Gene3D G3DSA:3.30.43.10 13 107 1.9E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 Gene3D G3DSA:3.30.465.10 109 229 1.5E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 Gene3D G3DSA:1.10.45.10 430 469 2.9E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 Pfam PF02913 FAD linked oxidases, C-terminal domain 228 468 2.1E-62 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC_RS14300 89c861e188079ca05ad11b0e5f3d5a2e 497 SUPERFAMILY SSF56176 18 229 1.4E-68 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 623 3.8E-65 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 PANTHER PTHR30627:SF2 209 661 1.3E-218 T 22-04-2016 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 PANTHER PTHR30627:SF2 2 193 1.3E-218 T 22-04-2016 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 SUPERFAMILY SSF56601 266 628 6.04E-101 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 Gene3D G3DSA:3.40.710.10 265 628 1.1E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 SUPERFAMILY SSF56519 53 265 4.45E-47 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 Gene3D G3DSA:3.90.1310.10 128 264 6.4E-37 T 22-04-2016 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 251 2.4E-43 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 627 4.3E-237 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 PANTHER PTHR30627 209 661 1.3E-218 T 22-04-2016 RPIC_RS18290 726ea0c285b6f7ad4cc6606f93e6ee5f 801 PANTHER PTHR30627 2 193 1.3E-218 T 22-04-2016 RPIC_RS14105 86366589d9817f97080f08fd755d9ede 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 133 4.4E-36 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS14105 86366589d9817f97080f08fd755d9ede 171 SUPERFAMILY SSF55083 4 144 1.57E-47 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS14105 86366589d9817f97080f08fd755d9ede 171 PANTHER PTHR20941 3 142 5.6E-53 T 22-04-2016 RPIC_RS14105 86366589d9817f97080f08fd755d9ede 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 133 1.2E-33 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS14105 86366589d9817f97080f08fd755d9ede 171 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS14105 86366589d9817f97080f08fd755d9ede 171 Gene3D G3DSA:3.30.70.560 4 153 3.5E-50 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 185 3.7E-14 T 22-04-2016 IPR024478 4HB MCP domain RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 511 4.9E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 SMART SM00283 265 512 6.8E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 Gene3D G3DSA:1.10.287.950 279 484 1.6E-60 T 22-04-2016 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 SMART SM00304 212 264 4.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PANTHER PTHR32089:SF63 164 515 1.1E-152 T 22-04-2016 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 Pfam PF00672 HAMP domain 193 260 3.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 24 3.5E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.5E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 3.5E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 3.5E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 3.5E-56 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 SUPERFAMILY SSF58104 232 513 7.59E-73 T 22-04-2016 RPIC_RS10305 92e06cb0d21bd7a0f74428219045b3d5 520 PANTHER PTHR32089 164 515 1.1E-152 T 22-04-2016 RPIC_RS00205 31c79035241b4b9e18174fc804492391 302 SUPERFAMILY SSF117892 101 218 1.2E-10 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS00205 31c79035241b4b9e18174fc804492391 302 Pfam PF01145 SPFH domain / Band 7 family 36 234 2.6E-30 T 22-04-2016 IPR001107 Band 7 domain RPIC_RS15180 feee86bbcee81d615511a291eec10617 321 SUPERFAMILY SSF51261 154 289 1.52E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif RPIC_RS15180 feee86bbcee81d615511a291eec10617 321 PANTHER PTHR21666 175 289 1.0E-45 T 22-04-2016 RPIC_RS15180 feee86bbcee81d615511a291eec10617 321 Pfam PF01551 Peptidase family M23 191 285 2.2E-31 T 22-04-2016 IPR016047 Peptidase M23 RPIC_RS15180 feee86bbcee81d615511a291eec10617 321 Gene3D G3DSA:2.70.70.10 155 290 7.8E-47 T 22-04-2016 RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 Gene3D G3DSA:3.30.70.240 131 193 9.5E-12 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 PANTHER PTHR16301 2 193 4.5E-48 T 22-04-2016 IPR023582 Impact family RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 Pfam PF09186 Domain of unknown function (DUF1949) 136 190 1.7E-16 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 Pfam PF01205 Uncharacterized protein family UPF0029 17 119 7.9E-26 T 22-04-2016 IPR001498 Impact, N-terminal RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 SUPERFAMILY SSF54980 131 193 6.47E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 Gene3D G3DSA:3.30.230.30 4 127 3.9E-43 T 22-04-2016 IPR001498 Impact, N-terminal RPIC_RS17215 7439d8e129e37c3d018ad70fc62572ed 194 SUPERFAMILY SSF54211 4 127 2.92E-39 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold RPIC_RS10670 81cd82be3f6ef651e8a2b962d5b5d7a9 362 Pfam PF01636 Phosphotransferase enzyme family 45 285 5.5E-56 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC_RS10670 81cd82be3f6ef651e8a2b962d5b5d7a9 362 PANTHER PTHR12725 79 230 8.2E-19 T 22-04-2016 RPIC_RS10670 81cd82be3f6ef651e8a2b962d5b5d7a9 362 PANTHER PTHR12725:SF80 79 230 8.2E-19 T 22-04-2016 RPIC_RS10670 81cd82be3f6ef651e8a2b962d5b5d7a9 362 Gene3D G3DSA:3.90.1200.10 128 328 6.8E-32 T 22-04-2016 RPIC_RS10670 81cd82be3f6ef651e8a2b962d5b5d7a9 362 SUPERFAMILY SSF56112 8 329 1.46E-59 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 SUPERFAMILY SSF53850 12 273 2.63E-61 T 22-04-2016 RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 PANTHER PTHR30085:SF2 9 300 1.4E-122 T 22-04-2016 RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 PANTHER PTHR30085 9 300 1.4E-122 T 22-04-2016 RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 2.3E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 Gene3D G3DSA:3.40.190.10 38 126 1.1E-26 T 22-04-2016 RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 Gene3D G3DSA:3.40.190.10 234 275 1.1E-26 T 22-04-2016 RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 SMART SM00062 41 273 1.2E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS01750 f5e10c5d6cfb6b2a582c1c9ff642aa4c 302 Gene3D G3DSA:3.40.190.10 127 233 4.4E-32 T 22-04-2016 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 Gene3D G3DSA:3.40.50.300 330 543 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 Gene3D G3DSA:3.40.50.300 21 286 4.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 PANTHER PTHR19211:SF49 19 586 0.0 T 22-04-2016 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 PANTHER PTHR19211 19 586 0.0 T 22-04-2016 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 SUPERFAMILY SSF52540 320 539 3.53E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 Pfam PF12848 ABC transporter 237 312 6.1E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 ProSitePatterns PS00211 ABC transporters family signature. 457 471 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 Pfam PF16326 ABC transporter C-terminal domain 594 659 7.9E-10 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 SUPERFAMILY SSF52540 139 273 4.69E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 SUPERFAMILY SSF52540 17 112 4.69E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 Pfam PF00005 ABC transporter 38 198 4.4E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 Pfam PF00005 ABC transporter 354 485 2.3E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 SMART SM00382 46 245 8.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS06205 eeac1a1cfcc8780f8ad8ec74506da8f5 665 SMART SM00382 363 530 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS16935 54b58eb2af6eff7a7482f15852dd0c93 202 PANTHER PTHR30328:SF19 9 192 8.0E-31 T 22-04-2016 RPIC_RS16935 54b58eb2af6eff7a7482f15852dd0c93 202 SUPERFAMILY SSF48498 85 194 1.78E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS16935 54b58eb2af6eff7a7482f15852dd0c93 202 PANTHER PTHR30328 9 192 8.0E-31 T 22-04-2016 RPIC_RS16935 54b58eb2af6eff7a7482f15852dd0c93 202 SUPERFAMILY SSF46689 6 89 2.36E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16935 54b58eb2af6eff7a7482f15852dd0c93 202 Gene3D G3DSA:1.10.10.60 3 61 5.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16935 54b58eb2af6eff7a7482f15852dd0c93 202 Gene3D G3DSA:1.10.357.10 62 198 5.1E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS09915 93ceef719776ab2336fc627fd4873c93 273 Pfam PF01925 Sulfite exporter TauE/SafE 12 267 1.0E-47 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS09915 93ceef719776ab2336fc627fd4873c93 273 PANTHER PTHR30269 4 272 1.2E-50 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS09915 93ceef719776ab2336fc627fd4873c93 273 PANTHER PTHR30269:SF14 4 272 1.2E-50 T 22-04-2016 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 SMART SM00562 3 140 1.2E-81 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 SUPERFAMILY SSF54919 1 140 2.75E-57 T 22-04-2016 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.593 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 PANTHER PTHR11349 1 134 8.6E-66 T 22-04-2016 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 Pfam PF00334 Nucleoside diphosphate kinase 4 135 1.7E-54 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 Gene3D G3DSA:3.30.70.141 1 138 1.3E-58 T 22-04-2016 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS05240 7396aefbd538cd6a1bec0e8b285fc136 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.6E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RPIC_RS03265 37900d39990d627f652e8f6ffe14444c 310 Pfam PF16074 Type IV Pilus-assembly protein W 166 301 1.7E-24 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 RPIC_RS01455 98c59e0fb297fac289b2bc2354766c44 466 Gene3D G3DSA:3.40.30.10 288 429 1.2E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01455 98c59e0fb297fac289b2bc2354766c44 466 PANTHER PTHR13833:SF51 44 428 8.3E-38 T 22-04-2016 RPIC_RS01455 98c59e0fb297fac289b2bc2354766c44 466 Pfam PF00578 AhpC/TSA family 303 407 1.5E-11 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS01455 98c59e0fb297fac289b2bc2354766c44 466 PANTHER PTHR13833 44 428 8.3E-38 T 22-04-2016 RPIC_RS01455 98c59e0fb297fac289b2bc2354766c44 466 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 7 217 2.2E-12 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 RPIC_RS01455 98c59e0fb297fac289b2bc2354766c44 466 SUPERFAMILY SSF52833 283 425 4.69E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 PANTHER PTHR11731 316 418 4.2E-29 T 22-04-2016 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 PANTHER PTHR11731 105 270 4.2E-29 T 22-04-2016 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 SUPERFAMILY SSF49785 428 664 7.44E-32 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 Gene3D G3DSA:3.40.50.1820 328 431 3.1E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 Gene3D G3DSA:3.40.50.1820 85 253 3.1E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 Gene3D G3DSA:2.60.120.260 432 666 4.6E-43 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 412 658 3.2E-33 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 SMART SM00939 399 659 7.4E-32 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 SUPERFAMILY SSF53474 84 435 1.52E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 109 379 1.6E-54 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 PANTHER PTHR11731:SF151 316 418 4.2E-29 T 22-04-2016 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 PANTHER PTHR11731:SF151 105 270 4.2E-29 T 22-04-2016 RPIC_RS10300 663d48fb78cc79bc07f1bb8bdcd0c26e 668 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 106 664 2.1E-78 T 22-04-2016 IPR005674 CocE/Serine esterase GO:0016787 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 394 39.308 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 Gene3D G3DSA:3.40.50.1260 11 180 2.6E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PIRSF PIRSF000724 4 401 2.0E-140 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PANTHER PTHR11406 1 397 7.7E-194 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 169 191 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 192 211 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 370 387 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 9.4E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 Gene3D G3DSA:3.40.50.1270 181 382 4.1E-82 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 Pfam PF00162 Phosphoglycerate kinase 13 384 2.5E-139 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02410 413f4b631a6cea45611e2547949fa207 403 SUPERFAMILY SSF53748 11 394 8.24E-143 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 RPIC_RS02985 2a4ecf52b65a7ae6a02822733e11fe31 122 SUPERFAMILY SSF52172 5 121 1.39E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS02985 2a4ecf52b65a7ae6a02822733e11fe31 122 PANTHER PTHR26402 4 122 6.1E-42 T 22-04-2016 RPIC_RS02985 2a4ecf52b65a7ae6a02822733e11fe31 122 Gene3D G3DSA:3.40.50.2300 4 121 1.1E-39 T 22-04-2016 RPIC_RS02985 2a4ecf52b65a7ae6a02822733e11fe31 122 Pfam PF00072 Response regulator receiver domain 6 117 1.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02985 2a4ecf52b65a7ae6a02822733e11fe31 122 SMART SM00448 4 117 6.9E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS11000 a24c6e5ca7f5dc2b1af37e5a62c9e13b 154 Pfam PF01219 Prokaryotic diacylglycerol kinase 44 144 2.8E-31 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RPIC_RS11000 a24c6e5ca7f5dc2b1af37e5a62c9e13b 154 Gene3D G3DSA:1.10.3830.10 31 148 1.0E-41 T 22-04-2016 RPIC_RS11000 a24c6e5ca7f5dc2b1af37e5a62c9e13b 154 PANTHER PTHR34299:SF1 25 153 1.7E-31 T 22-04-2016 RPIC_RS11000 a24c6e5ca7f5dc2b1af37e5a62c9e13b 154 PANTHER PTHR34299 25 153 1.7E-31 T 22-04-2016 RPIC_RS11000 a24c6e5ca7f5dc2b1af37e5a62c9e13b 154 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 98 109 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 ProSitePatterns PS00760 Signal peptidases I lysine active site. 95 107 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 PANTHER PTHR12383:SF27 17 215 2.0E-53 T 22-04-2016 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 Pfam PF10502 Signal peptidase, peptidase S26 169 208 1.5E-6 T 22-04-2016 IPR019533 Peptidase S26 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 ProSitePatterns PS00501 Signal peptidases I serine active site. 39 46 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 PANTHER PTHR12383 17 215 2.0E-53 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 105 6.6E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 172 191 6.6E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 30 46 6.6E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 212 1.5E-45 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 SUPERFAMILY SSF51306 28 226 1.7E-58 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 Gene3D G3DSA:2.10.109.10 172 216 6.5E-44 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 Gene3D G3DSA:2.10.109.10 27 103 6.5E-44 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 Pfam PF00717 Peptidase S24-like 37 116 1.1E-19 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B RPIC_RS09135 b1deefe92cc487fc9d581aa83721f3f4 230 ProSitePatterns PS00761 Signal peptidases I signature 3. 177 190 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RPIC_RS13260 278b766d5cd54bd8f8ef054d0b863a32 389 PANTHER PTHR30483:SF7 11 386 3.0E-123 T 22-04-2016 RPIC_RS13260 278b766d5cd54bd8f8ef054d0b863a32 389 PANTHER PTHR30483 11 386 3.0E-123 T 22-04-2016 RPIC_RS13260 278b766d5cd54bd8f8ef054d0b863a32 389 SUPERFAMILY SSF53822 27 385 2.02E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS13260 278b766d5cd54bd8f8ef054d0b863a32 389 Pfam PF13458 Periplasmic binding protein 28 374 1.2E-50 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS13260 278b766d5cd54bd8f8ef054d0b863a32 389 Gene3D G3DSA:3.40.50.2300 27 221 4.1E-41 T 22-04-2016 RPIC_RS11225 98245f41a479413fe24d414873287116 341 Gene3D G3DSA:3.30.200.20 19 106 1.8E-15 T 22-04-2016 RPIC_RS11225 98245f41a479413fe24d414873287116 341 PANTHER PTHR24362 81 303 4.1E-54 T 22-04-2016 RPIC_RS11225 98245f41a479413fe24d414873287116 341 PANTHER PTHR24362 20 61 4.1E-54 T 22-04-2016 RPIC_RS11225 98245f41a479413fe24d414873287116 341 SUPERFAMILY SSF56112 21 296 8.9E-55 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS11225 98245f41a479413fe24d414873287116 341 Pfam PF00069 Protein kinase domain 24 289 1.3E-35 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIC_RS11225 98245f41a479413fe24d414873287116 341 Gene3D G3DSA:1.10.510.10 107 298 9.4E-40 T 22-04-2016 RPIC_RS11225 98245f41a479413fe24d414873287116 341 SMART SM00220 24 298 9.7E-32 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RPIC_RS11225 98245f41a479413fe24d414873287116 341 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 166 178 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 303 314 8.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 397 414 8.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 376 395 8.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 430 450 8.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 350 366 8.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 233 250 8.7E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 238 463 4.7E-47 T 22-04-2016 RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PANTHER PTHR24322 236 360 2.7E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PANTHER PTHR24322 376 407 2.7E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PANTHER PTHR24322:SF438 236 360 2.7E-46 T 22-04-2016 RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PANTHER PTHR24322:SF438 376 407 2.7E-46 T 22-04-2016 RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 Gene3D G3DSA:3.40.50.720 226 466 1.0E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 363 391 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 376 395 8.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 303 314 8.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 356 364 8.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 SUPERFAMILY SSF51735 228 464 1.75E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02045 b0839ec6cb841f2978d7642f2f5c6fd0 470 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 232 407 1.2E-5 T 22-04-2016 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 PANTHER PTHR37417:SF2 7 514 6.6E-228 T 22-04-2016 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 PANTHER PTHR37417 7 514 6.6E-228 T 22-04-2016 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 Gene3D G3DSA:3.50.50.60 140 141 2.9E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 Gene3D G3DSA:3.50.50.60 184 282 2.9E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 Gene3D G3DSA:3.50.50.60 15 74 2.9E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 SUPERFAMILY SSF51905 145 255 7.08E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 SUPERFAMILY SSF51905 15 62 7.08E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS08370 185fe3a58ac72903656d42511e4e5189 531 Pfam PF06100 MCRA family 10 500 2.4E-204 T 22-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 RPIC_RS03360 7df5377a06d7666a7065bb8e138e820f 371 PANTHER PTHR30574:SF1 4 362 1.6E-44 T 22-04-2016 RPIC_RS03360 7df5377a06d7666a7065bb8e138e820f 371 PANTHER PTHR30574 4 362 1.6E-44 T 22-04-2016 RPIC_RS03360 7df5377a06d7666a7065bb8e138e820f 371 Pfam PF04143 Sulphur transport 30 358 2.7E-59 T 22-04-2016 IPR007272 Sulphur transport domain RPIC_RS09050 5aa49125d6ea9da90162f3c31eca033e 282 SUPERFAMILY SSF143631 2 272 1.29E-52 T 22-04-2016 IPR003374 ApbE-like domain RPIC_RS09050 5aa49125d6ea9da90162f3c31eca033e 282 Pfam PF02424 ApbE family 10 265 1.1E-40 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RPIC_RS09050 5aa49125d6ea9da90162f3c31eca033e 282 PANTHER PTHR30040 2 262 4.5E-42 T 22-04-2016 RPIC_RS09050 5aa49125d6ea9da90162f3c31eca033e 282 PANTHER PTHR30040:SF2 2 262 4.5E-42 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 Gene3D G3DSA:1.10.10.10 159 217 4.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 SMART SM00421 154 211 2.3E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 PANTHER PTHR26402:SF458 5 217 1.2E-45 T 22-04-2016 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 Pfam PF00072 Response regulator receiver domain 8 119 1.1E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 SUPERFAMILY SSF46894 146 217 4.76E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 SMART SM00448 5 121 3.9E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 PANTHER PTHR26402 5 217 1.2E-45 T 22-04-2016 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 1.2E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 SUPERFAMILY SSF52172 4 135 1.85E-20 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS16625 9ab3ff90e29e20261037ff65e982bb41 222 Gene3D G3DSA:3.40.50.2300 3 158 1.0E-22 T 22-04-2016 RPIC_RS04750 512dd58076796f7b473b27642be30d18 270 SUPERFAMILY SSF51556 2 259 3.57E-73 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS04750 512dd58076796f7b473b27642be30d18 270 PANTHER PTHR10060 1 265 4.9E-71 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC_RS04750 512dd58076796f7b473b27642be30d18 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RPIC_RS04750 512dd58076796f7b473b27642be30d18 270 PIRSF PIRSF005902 1 264 2.0E-61 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC_RS04750 512dd58076796f7b473b27642be30d18 270 Gene3D G3DSA:3.20.20.140 1 258 9.6E-72 T 22-04-2016 RPIC_RS04750 512dd58076796f7b473b27642be30d18 270 Pfam PF01026 TatD related DNase 3 258 2.2E-62 T 22-04-2016 IPR001130 TatD family GO:0016788 RPIC_RS14885 a7b090580e20a7efe79df3642f1659c4 304 SUPERFAMILY SSF74653 180 295 1.2E-16 T 22-04-2016 RPIC_RS14885 a7b090580e20a7efe79df3642f1659c4 304 Pfam PF13103 TonB C terminal 190 278 4.4E-6 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC_RS14885 a7b090580e20a7efe79df3642f1659c4 304 Gene3D G3DSA:3.30.1150.10 182 295 2.6E-14 T 22-04-2016 RPIC_RS14885 a7b090580e20a7efe79df3642f1659c4 304 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 241 293 6.4E-8 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 Gene3D G3DSA:3.30.70.100 181 265 4.7E-13 T 22-04-2016 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 PANTHER PTHR30221:SF3 1 280 6.1E-178 T 22-04-2016 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 SUPERFAMILY SSF50182 114 179 2.19E-16 T 22-04-2016 IPR010920 LSM domain RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 Gene3D G3DSA:2.30.30.60 129 178 5.7E-17 T 22-04-2016 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 SUPERFAMILY SSF82689 180 277 1.57E-20 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 Pfam PF00924 Mechanosensitive ion channel 71 265 5.0E-40 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 PANTHER PTHR30221 1 280 6.1E-178 T 22-04-2016 RPIC_RS14280 5c36cadec0cef507a946d39b2a0ac12c 300 SUPERFAMILY SSF82861 28 111 1.23E-15 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 PANTHER PTHR23150:SF24 199 428 3.0E-33 T 22-04-2016 RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 Gene3D G3DSA:3.90.1580.10 203 356 1.5E-39 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 Gene3D G3DSA:3.90.1580.10 357 430 7.9E-9 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 SUPERFAMILY SSF56436 210 430 2.02E-52 T 22-04-2016 IPR016187 C-type lectin fold RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 PANTHER PTHR23150 199 428 3.0E-33 T 22-04-2016 RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 Pfam PF03781 Sulfatase-modifying factor enzyme 1 209 353 9.8E-29 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme RPIC_RS04030 80d57fd2b9ee339438fc41f3d63dbb02 432 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 30 430 1.1E-123 T 22-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 Gene3D G3DSA:3.40.640.10 50 243 3.3E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 Pfam PF00155 Aminotransferase class I and II 56 280 4.4E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 195 208 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 PANTHER PTHR11751 8 335 3.1E-43 T 22-04-2016 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 PANTHER PTHR11751:SF3 8 335 3.1E-43 T 22-04-2016 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 329 1.3E-104 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 RPIC_RS13095 615418ed512bc55f25f27cb9700343e0 335 SUPERFAMILY SSF53383 6 330 4.44E-52 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS18145 044a8be3b951d2755be6807a2e516f88 155 Gene3D G3DSA:3.30.1460.30 14 113 6.9E-31 T 22-04-2016 IPR007076 TfoX, N-terminal RPIC_RS18145 044a8be3b951d2755be6807a2e516f88 155 SUPERFAMILY SSF159894 13 112 1.73E-25 T 22-04-2016 RPIC_RS18145 044a8be3b951d2755be6807a2e516f88 155 Pfam PF04993 TfoX N-terminal domain 20 111 3.2E-27 T 22-04-2016 IPR007076 TfoX, N-terminal RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 223 415 2.9E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 PANTHER PTHR30193 3 71 4.8E-141 T 22-04-2016 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 PANTHER PTHR30193 183 416 4.8E-141 T 22-04-2016 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 PANTHER PTHR30193:SF8 3 71 4.8E-141 T 22-04-2016 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 PANTHER PTHR30193:SF8 183 416 4.8E-141 T 22-04-2016 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 SUPERFAMILY SSF161098 198 410 1.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 Gene3D G3DSA:1.10.3720.10 22 72 1.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07275 cbf770d970eda5ed2ae5577657143c90 422 Gene3D G3DSA:1.10.3720.10 174 411 1.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 SUPERFAMILY SSF52172 1 165 7.12E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 SMART SM00862 145 218 2.1E-15 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 SMART SM00448 1 112 2.9E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 PANTHER PTHR26402:SF518 1 223 9.5E-74 T 22-04-2016 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 2.9E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 PANTHER PTHR26402 1 223 9.5E-74 T 22-04-2016 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 Gene3D G3DSA:1.10.10.10 123 220 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 Pfam PF00072 Response regulator receiver domain 4 113 9.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS17870 3a083925c592c59a6f0aa9034dad21c7 226 Gene3D G3DSA:3.40.50.2300 1 122 9.6E-37 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:3.30.70.20 631 667 7.3E-4 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Pfam PF12838 4Fe-4S dicluster domain 334 380 1.2E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Pfam PF12800 4Fe-4S binding domain 621 633 0.041 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 PANTHER PTHR24960:SF43 266 386 1.1E-70 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 PANTHER PTHR24960:SF43 583 714 1.1E-70 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 SUPERFAMILY SSF54862 206 387 2.02E-55 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 SUPERFAMILY SSF54862 582 684 2.02E-55 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:3.30.70.20 330 373 3.0E-16 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 591 602 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 366 377 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 622 633 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:3.30.70.20 201 261 2.1E-10 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Pfam PF00037 4Fe-4S binding domain 584 606 1.7E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Pfam PF00037 4Fe-4S binding domain 206 227 6.8E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 PANTHER PTHR24960 266 386 1.1E-70 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 PANTHER PTHR24960 583 714 1.1E-70 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:1.10.1060.10 374 385 6.8E-12 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:1.10.1060.10 510 511 6.8E-12 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:1.10.1060.10 465 466 6.8E-12 T 22-04-2016 RPIC_RS12750 287522e03aa9e449b4ebc5f8deb41c32 719 Gene3D G3DSA:3.30.70.20 582 630 2.7E-13 T 22-04-2016 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 Pfam PF13602 Zinc-binding dehydrogenase 194 334 7.6E-21 T 22-04-2016 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 337 1.1E-170 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 PANTHER PTHR11695:SF558 18 335 2.9E-131 T 22-04-2016 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 SUPERFAMILY SSF50129 10 147 1.07E-33 T 22-04-2016 IPR011032 GroES-like RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 Gene3D G3DSA:3.90.180.10 2 158 2.7E-37 T 22-04-2016 IPR011032 GroES-like RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 SMART SM00829 13 334 4.3E-13 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 Gene3D G3DSA:3.40.50.720 159 264 2.8E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 PANTHER PTHR11695 18 335 2.9E-131 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 90 2.4E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RPIC_RS00315 afed824b22a10c74cd316ec0452275f1 337 SUPERFAMILY SSF51735 117 286 3.67E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 SUPERFAMILY SSF53383 122 484 4.17E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 Gene3D G3DSA:3.40.640.10 159 372 6.5E-59 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 SMART SM00345 18 77 1.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 PANTHER PTHR11751 99 487 1.3E-112 T 22-04-2016 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 Gene3D G3DSA:3.90.1150.10 374 484 1.6E-6 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 2.8E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 Pfam PF00155 Aminotransferase class I and II 161 474 3.3E-31 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 Gene3D G3DSA:1.10.10.10 8 78 4.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 PANTHER PTHR11751:SF314 99 487 1.3E-112 T 22-04-2016 RPIC_RS02590 7dc073bed976d02d54f51d59b01e4dee 487 SUPERFAMILY SSF46785 9 81 3.68E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10060 a31e67eb842b2a002a92b75ab8f5855a 150 PANTHER PTHR38107:SF2 12 150 4.7E-43 T 22-04-2016 RPIC_RS10060 a31e67eb842b2a002a92b75ab8f5855a 150 SUPERFAMILY SSF53955 9 150 1.89E-49 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS10060 a31e67eb842b2a002a92b75ab8f5855a 150 PANTHER PTHR38107 12 150 4.7E-43 T 22-04-2016 RPIC_RS10060 a31e67eb842b2a002a92b75ab8f5855a 150 Pfam PF00959 Phage lysozyme 37 142 2.0E-21 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 RPIC_RS10060 a31e67eb842b2a002a92b75ab8f5855a 150 Gene3D G3DSA:1.10.530.40 10 150 3.3E-52 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 SMART SM00448 1 112 8.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 PANTHER PTHR26402 1 216 1.1E-97 T 22-04-2016 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 PANTHER PTHR26402:SF279 1 216 1.1E-97 T 22-04-2016 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 Gene3D G3DSA:1.10.10.10 123 216 1.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.6E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 SMART SM00862 145 216 1.7E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 Gene3D G3DSA:3.40.50.2300 2 120 3.6E-37 T 22-04-2016 RPIC_RS02795 2a0fffda45c18d466fa884eed3c6e7af 224 SUPERFAMILY SSF52172 2 174 5.73E-38 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS05965 47c7fe2dfd3a386216f1b5c3a2de57d9 413 SUPERFAMILY SSF53383 5 402 7.84E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS05965 47c7fe2dfd3a386216f1b5c3a2de57d9 413 Pfam PF00155 Aminotransferase class I and II 36 395 5.1E-50 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS05965 47c7fe2dfd3a386216f1b5c3a2de57d9 413 PANTHER PTHR11751 9 405 4.2E-169 T 22-04-2016 RPIC_RS05965 47c7fe2dfd3a386216f1b5c3a2de57d9 413 PANTHER PTHR11751:SF303 9 405 4.2E-169 T 22-04-2016 RPIC_RS05965 47c7fe2dfd3a386216f1b5c3a2de57d9 413 Gene3D G3DSA:3.90.1150.10 280 404 7.5E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS05965 47c7fe2dfd3a386216f1b5c3a2de57d9 413 Gene3D G3DSA:3.40.640.10 60 279 1.7E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 SUPERFAMILY SSF158544 129 249 1.12E-13 T 22-04-2016 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 Gene3D G3DSA:1.10.40.60 251 296 1.6E-4 T 22-04-2016 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 PIRSF PIRSF002786 13 361 2.4E-74 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 Gene3D G3DSA:1.10.40.60 127 250 2.5E-12 T 22-04-2016 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 SUPERFAMILY SSF54523 315 341 3.45E-5 T 22-04-2016 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 SUPERFAMILY SSF54523 51 128 3.45E-5 T 22-04-2016 RPIC_RS16810 d0d64053c9b71128e6ed2725d3fd99b4 362 Pfam PF03934 Type II secretion system (T2SS), protein K 43 342 1.2E-79 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 PANTHER PTHR34824 1 352 4.2E-91 T 22-04-2016 RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 PIRSF PIRSF005485 1 352 1.0E-102 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 Pfam PF01628 HrcA protein C terminal domain 118 335 8.5E-55 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 SUPERFAMILY SSF55781 70 83 2.35E-58 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 SUPERFAMILY SSF55781 115 351 2.35E-58 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 342 25.692 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 347 3.5E-90 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 SUPERFAMILY SSF46785 1 80 7.89E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 Gene3D G3DSA:1.10.10.10 1 82 1.4E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14220 d537c180567188e3608c4f52d2236902 352 Gene3D G3DSA:3.30.450.40 189 351 6.3E-38 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PANTHER PTHR30115:SF12 1 112 3.8E-68 T 22-04-2016 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 SUPERFAMILY SSF54913 1 112 8.26E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.4E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 SMART SM00938 4 105 6.1E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 Gene3D G3DSA:3.30.70.120 1 112 5.6E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PIRSF PIRSF039144 1 112 8.1E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PANTHER PTHR30115 1 112 3.8E-68 T 22-04-2016 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS00960 5718a9c603fff834bf2266fd252c14af 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 RPIC_RS02515 54122bc5b1a34eedec35ecf77418246f 225 SUPERFAMILY SSF56529 36 201 2.2E-10 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS02515 54122bc5b1a34eedec35ecf77418246f 225 Pfam PF11010 Protein of unknown function (DUF2848) 24 216 5.6E-79 T 22-04-2016 IPR021269 Protein of unknown function DUF2848 RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 SUPERFAMILY SSF51735 106 301 4.7E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 Gene3D G3DSA:3.40.50.720 1 117 6.8E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 Gene3D G3DSA:3.40.50.720 118 301 5.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 PANTHER PTHR10996:SF127 1 325 1.9E-96 T 22-04-2016 RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 SUPERFAMILY SSF52283 1 140 1.55E-19 T 22-04-2016 RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 300 1.1E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 PANTHER PTHR10996 1 325 1.9E-96 T 22-04-2016 RPIC_RS18550 84a5cd2f825736c0ecea6e844bc3785d 342 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 331 1.2E-14 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC_RS13170 5109a4a09670e258e61706b1d9e91a8d 300 PANTHER PTHR30589 1 289 9.9E-103 T 22-04-2016 RPIC_RS13170 5109a4a09670e258e61706b1d9e91a8d 300 PANTHER PTHR30589:SF0 1 289 9.9E-103 T 22-04-2016 RPIC_RS13170 5109a4a09670e258e61706b1d9e91a8d 300 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 291 9.3E-85 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC_RS13170 5109a4a09670e258e61706b1d9e91a8d 300 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 285 9.4E-79 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC_RS13170 5109a4a09670e258e61706b1d9e91a8d 300 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC_RS13170 5109a4a09670e258e61706b1d9e91a8d 300 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 290 20.342 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 RPIC_RS02560 e12383532f744e49c47a7feedc8308c1 727 Gene3D G3DSA:2.40.170.20 170 724 7.1E-68 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS02560 e12383532f744e49c47a7feedc8308c1 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 2.2E-5 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS02560 e12383532f744e49c47a7feedc8308c1 727 SUPERFAMILY SSF56935 43 727 7.1E-84 T 22-04-2016 RPIC_RS02560 e12383532f744e49c47a7feedc8308c1 727 Gene3D G3DSA:2.170.130.10 57 169 8.1E-7 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS02560 e12383532f744e49c47a7feedc8308c1 727 Pfam PF00593 TonB dependent receptor 459 724 7.4E-23 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 SUPERFAMILY SSF52540 11 222 4.14E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 Gene3D G3DSA:1.20.272.20 235 352 5.1E-40 T 22-04-2016 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 SUPERFAMILY SSF48019 224 351 3.4E-28 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 227 325 1.5E-9 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 PANTHER PTHR34388 2 350 7.9E-56 T 22-04-2016 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 20 349 7.3E-81 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 Gene3D G3DSA:1.10.8.60 151 234 1.9E-33 T 22-04-2016 RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 Gene3D G3DSA:3.40.50.300 1 146 8.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14680 c69c5a3a08b5e1b7403dfe5df79a75b2 358 Pfam PF06144 DNA polymerase III, delta subunit 24 201 1.8E-18 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RPIC_RS16140 a41b09444b71a6e2e4464732415a5f52 112 SUPERFAMILY SSF54913 6 108 2.41E-34 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta RPIC_RS16140 a41b09444b71a6e2e4464732415a5f52 112 PANTHER PTHR23419 9 112 6.6E-34 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RPIC_RS16140 a41b09444b71a6e2e4464732415a5f52 112 Pfam PF03091 CutA1 divalent ion tolerance protein 9 105 5.3E-32 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 RPIC_RS16140 a41b09444b71a6e2e4464732415a5f52 112 Gene3D G3DSA:3.30.70.830 6 109 2.0E-37 T 22-04-2016 RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 PIRSF PIRSF010256 1 391 5.1E-144 T 22-04-2016 IPR011195 Uncharacterised conserved protein UCP010256 RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 SUPERFAMILY SSF53300 219 346 2.07E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 Gene3D G3DSA:3.40.50.410 220 324 7.8E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 SMART SM00327 217 382 7.3E-4 T 22-04-2016 IPR002035 von Willebrand factor, type A RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 PANTHER PTHR39338:SF1 1 399 9.4E-89 T 22-04-2016 RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 PANTHER PTHR39338 1 399 9.4E-89 T 22-04-2016 RPIC_RS06705 be364e58c119aa9a528e91e3b5359723 410 Pfam PF05762 VWA domain containing CoxE-like protein 161 381 3.0E-80 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 Gene3D G3DSA:3.40.50.300 75 154 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 Gene3D G3DSA:3.40.50.300 239 325 6.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 SMART SM00763 19 376 4.2E-215 T 22-04-2016 IPR013153 PrkA AAA domain RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 PIRSF PIRSF000549 1 640 1.2E-287 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 Pfam PF08298 PrkA AAA domain 20 376 6.6E-174 T 22-04-2016 IPR013153 PrkA AAA domain RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.4E-69 T 22-04-2016 IPR010650 PrkA C-terminal domain RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 SUPERFAMILY SSF52540 75 344 3.38E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 PANTHER PTHR30267 1 640 4.9E-269 T 22-04-2016 RPIC_RS10095 bb916d953e5a5e5f1ef997661e732099 640 PANTHER PTHR30267:SF2 1 640 4.9E-269 T 22-04-2016 RPIC_RS17315 b831c6d208a3b236118b068550b07ecf 407 PANTHER PTHR32507 1 403 6.7E-14 T 22-04-2016 RPIC_RS17315 b831c6d208a3b236118b068550b07ecf 407 Pfam PF00999 Sodium/hydrogen exchanger family 23 351 7.5E-26 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 SUPERFAMILY SSF103190 117 225 1.91E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 Gene3D G3DSA:3.30.70.270 398 553 1.9E-48 T 22-04-2016 RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 PANTHER PTHR10799 299 551 4.9E-29 T 22-04-2016 RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 SMART SM00267 385 555 2.6E-54 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 PANTHER PTHR10799:SF750 299 551 4.9E-29 T 22-04-2016 RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 393 553 1.1E-44 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 SUPERFAMILY SSF55073 401 553 6.2E-44 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS13300 34ef441af6e1324f5cd31c5b000b5aac 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 396 551 4.8E-42 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS01650 b2e396f56a600900a7edfdf5505e8af0 209 PANTHER PTHR32183 18 206 7.7E-12 T 22-04-2016 RPIC_RS01650 b2e396f56a600900a7edfdf5505e8af0 209 SUPERFAMILY SSF53335 13 206 3.62E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS01650 b2e396f56a600900a7edfdf5505e8af0 209 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 14 206 1.5E-45 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 RPIC_RS01650 b2e396f56a600900a7edfdf5505e8af0 209 PANTHER PTHR32183:SF6 18 206 7.7E-12 T 22-04-2016 RPIC_RS01650 b2e396f56a600900a7edfdf5505e8af0 209 Gene3D G3DSA:3.40.50.150 28 207 5.1E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS04660 c4739438d6b9359e96cb428c29477eea 83 PANTHER PTHR33884 6 83 1.3E-17 T 22-04-2016 RPIC_RS04660 c4739438d6b9359e96cb428c29477eea 83 PANTHER PTHR33884:SF1 6 83 1.3E-17 T 22-04-2016 RPIC_RS04660 c4739438d6b9359e96cb428c29477eea 83 Pfam PF04226 Transglycosylase associated protein 34 80 6.6E-12 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 SUPERFAMILY SSF51735 7 255 1.68E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PANTHER PTHR24322:SF631 11 140 2.0E-35 T 22-04-2016 RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PANTHER PTHR24322:SF631 156 188 2.0E-35 T 22-04-2016 RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PANTHER PTHR24322 11 140 2.0E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PANTHER PTHR24322 156 188 2.0E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 Pfam PF00106 short chain dehydrogenase 8 194 3.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 Gene3D G3DSA:3.40.50.720 9 217 1.6E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05700 eb5151590322352991ee6b9af8c42d65 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.3E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS18485 c4c73e8910dbd0a6bebaa9b4b7e4ed6d 64 PANTHER PTHR38453:SF1 1 64 3.0E-30 T 22-04-2016 RPIC_RS18485 c4c73e8910dbd0a6bebaa9b4b7e4ed6d 64 PANTHER PTHR38453 1 64 3.0E-30 T 22-04-2016 RPIC_RS18485 c4c73e8910dbd0a6bebaa9b4b7e4ed6d 64 Pfam PF04328 Protein of unknown function (DUF466) 5 64 2.9E-29 T 22-04-2016 IPR007423 Protein of unknown function DUF466 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 Gene3D G3DSA:1.10.150.170 116 222 2.6E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 PANTHER PTHR11265:SF0 9 319 1.3E-128 T 22-04-2016 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 SUPERFAMILY SSF53335 11 116 7.1E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 SUPERFAMILY SSF53335 220 318 7.1E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 Pfam PF01795 MraW methylase family 9 318 1.9E-98 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 PIRSF PIRSF004486 5 319 7.6E-95 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 319 36.831 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 SUPERFAMILY SSF81799 117 220 4.71E-32 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 318 3.1E-103 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 PANTHER PTHR11265 9 319 1.3E-128 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 Gene3D G3DSA:3.40.50.150 11 113 1.2E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15265 78190cedcb38f0cdc3b21391656b05bb 319 Gene3D G3DSA:3.40.50.150 223 318 1.2E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS16785 811b211ef186e9a987f41660bb863261 227 Pfam PF11356 Type II secretion system protein C 69 128 6.1E-7 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 Gene3D G3DSA:3.10.129.10 11 146 2.5E-49 T 22-04-2016 IPR029069 HotDog domain RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 PANTHER PTHR12418 18 153 2.5E-45 T 22-04-2016 RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 29 139 2.7E-47 T 22-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 138 9.8E-27 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 Pfam PF03061 Thioesterase superfamily 58 130 4.0E-14 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 PANTHER PTHR12418:SF24 18 153 2.5E-45 T 22-04-2016 RPIC_RS15385 59f1d6cc32a8a72f02688181c7ee6d1c 153 SUPERFAMILY SSF54637 12 143 1.41E-31 T 22-04-2016 IPR029069 HotDog domain RPIC_RS06315 02277fc3984cd53f15ce33d8dd199d28 404 SUPERFAMILY SSF64383 249 386 1.01E-22 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC_RS06315 02277fc3984cd53f15ce33d8dd199d28 404 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 256 379 1.0E-5 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC_RS06315 02277fc3984cd53f15ce33d8dd199d28 404 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 256 376 5.0E-10 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC_RS06315 02277fc3984cd53f15ce33d8dd199d28 404 Gene3D G3DSA:3.30.1400.10 249 385 3.5E-24 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC_RS06315 02277fc3984cd53f15ce33d8dd199d28 404 SMART SM00771 250 379 4.7E-33 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 RPIC_RS07940 ffd056e55838ff9d1eeec23856e33b86 127 Pfam PF05433 Glycine zipper 2TM domain 36 76 2.0E-5 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 PANTHER PTHR30293:SF1 1 293 6.6E-85 T 22-04-2016 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 Gene3D G3DSA:1.10.10.10 1 81 5.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 SUPERFAMILY SSF53850 89 295 2.06E-34 T 22-04-2016 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 Gene3D G3DSA:3.40.190.10 194 266 6.1E-12 T 22-04-2016 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 Pfam PF03466 LysR substrate binding domain 88 292 3.9E-35 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.3E-23 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 PANTHER PTHR30293 1 293 6.6E-85 T 22-04-2016 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 SUPERFAMILY SSF46785 1 86 1.09E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS10100 a0088c572cedca5058fdf6c96aa91a6a 300 Gene3D G3DSA:3.40.190.10 82 193 4.9E-21 T 22-04-2016 RPIC_RS08760 7b2b3d411ce1bf18587c399b8c8b68b3 139 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 139 1.0E-36 T 22-04-2016 IPR004891 MerC mercury resistance protein RPIC_RS08760 7b2b3d411ce1bf18587c399b8c8b68b3 139 Pfam PF03203 MerC mercury resistance protein 10 119 2.2E-18 T 22-04-2016 IPR004891 MerC mercury resistance protein RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 ProSitePatterns PS00449 ATP synthase a subunit signature. 216 225 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 PANTHER PTHR11410:SF7 147 293 2.1E-71 T 22-04-2016 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 PANTHER PTHR11410:SF7 46 127 2.1E-71 T 22-04-2016 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 43 288 2.9E-42 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 Gene3D G3DSA:1.20.120.220 104 293 1.4E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 Hamap MF_01393 ATP synthase subunit a [atpB]. 24 293 14.034 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 SUPERFAMILY SSF81336 101 287 7.06E-39 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 PANTHER PTHR11410 147 293 2.1E-71 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 PANTHER PTHR11410 46 127 2.1E-71 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS17435 996c5bc00933426154ee7bfdb11f245c 293 Pfam PF00119 ATP synthase A chain 51 286 5.2E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 PANTHER PTHR11088 1 315 3.6E-108 T 22-04-2016 RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 Gene3D G3DSA:3.40.50.300 9 178 1.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 SUPERFAMILY SSF52540 13 156 1.76E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 Gene3D G3DSA:1.10.287.890 214 294 4.6E-32 T 22-04-2016 RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 11 317 29.137 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 Pfam PF01715 IPP transferase 45 297 2.7E-87 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RPIC_RS13975 ef2b4fb10baddf25d293a23a2e815819 325 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 302 2.3E-90 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.7E-20 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 8.7E-20 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.7E-20 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 486 4.3E-220 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 SUPERFAMILY SSF46548 2 154 6.45E-39 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 Gene3D G3DSA:3.50.50.60 256 396 2.8E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 SUPERFAMILY SSF51971 371 480 5.3E-12 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PANTHER PTHR11938:SF75 345 480 1.6E-139 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PANTHER PTHR11938:SF75 36 329 1.6E-139 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 SUPERFAMILY SSF51971 142 410 1.06E-66 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 Gene3D G3DSA:3.50.50.60 145 255 2.9E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 468 1.1E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PANTHER PTHR11938 345 480 1.6E-139 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 PANTHER PTHR11938 36 329 1.6E-139 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 Gene3D G3DSA:3.50.50.60 397 482 7.5E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 Gene3D G3DSA:1.10.1060.10 4 144 4.8E-40 T 22-04-2016 RPIC_RS16005 952b28efc547e0a0d362c046ed937525 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 2.4E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II RPIC_RS11635 dd33c2756268bfd8089cb5545bd746f3 76 PANTHER PTHR36154 1 65 2.6E-12 T 22-04-2016 RPIC_RS11635 dd33c2756268bfd8089cb5545bd746f3 76 SUPERFAMILY SSF46955 3 56 3.66E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS11635 dd33c2756268bfd8089cb5545bd746f3 76 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 3.8E-21 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RPIC_RS08930 d1db296f2a66ffa5487f8b06226b5a30 164 SUPERFAMILY SSF52788 6 144 9.55E-40 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS08930 d1db296f2a66ffa5487f8b06226b5a30 164 PANTHER PTHR11717 7 161 3.5E-32 T 22-04-2016 RPIC_RS08930 d1db296f2a66ffa5487f8b06226b5a30 164 SMART SM00226 6 144 1.9E-33 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS08930 d1db296f2a66ffa5487f8b06226b5a30 164 Gene3D G3DSA:3.40.50.270 4 142 7.6E-41 T 22-04-2016 RPIC_RS08930 d1db296f2a66ffa5487f8b06226b5a30 164 PANTHER PTHR11717:SF18 7 161 3.5E-32 T 22-04-2016 RPIC_RS08930 d1db296f2a66ffa5487f8b06226b5a30 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 136 2.5E-17 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 PANTHER PTHR21581 85 360 2.0E-90 T 22-04-2016 RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 162 1.8E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 228 241 1.8E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 201 218 1.8E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 121 343 1.1E-57 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 Gene3D G3DSA:3.40.710.10 118 361 2.6E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 PANTHER PTHR21581:SF8 85 360 2.0E-90 T 22-04-2016 RPIC_RS09515 1f931b38bf13471d8fc2455ed5a5e6e6 396 SUPERFAMILY SSF56601 123 363 1.61E-56 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 Gene3D G3DSA:3.40.47.10 7 126 1.1E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 Gene3D G3DSA:3.40.47.10 193 275 1.1E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 PANTHER PTHR18919 1 393 6.6E-166 T 22-04-2016 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 PANTHER PTHR18919:SF71 1 393 6.6E-166 T 22-04-2016 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 390 1.9E-123 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 Pfam PF02803 Thiolase, C-terminal domain 269 391 3.8E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 SUPERFAMILY SSF53901 6 269 2.42E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 SUPERFAMILY SSF53901 270 391 1.41E-36 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 Pfam PF00108 Thiolase, N-terminal domain 7 261 1.9E-65 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 PIRSF PIRSF000429 1 393 2.3E-118 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 Gene3D G3DSA:3.40.47.10 155 192 8.6E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS12950 d97ab9ad7a4e447c48ca717bac990be8 393 Gene3D G3DSA:3.40.47.10 276 391 8.6E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS02945 b49d6eff8ae4592ee3d136bf79ec0986 174 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 29 147 6.1E-9 T 22-04-2016 IPR007621 TPM domain RPIC_RS02945 b49d6eff8ae4592ee3d136bf79ec0986 174 PANTHER PTHR30373 25 174 2.2E-39 T 22-04-2016 RPIC_RS02945 b49d6eff8ae4592ee3d136bf79ec0986 174 PANTHER PTHR30373:SF3 25 174 2.2E-39 T 22-04-2016 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 SMART SM00421 155 212 4.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 Pfam PF00072 Response regulator receiver domain 9 120 7.5E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 Gene3D G3DSA:1.10.10.10 157 214 6.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 SUPERFAMILY SSF52172 7 124 4.55E-21 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 SUPERFAMILY SSF46894 151 217 2.14E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 PANTHER PTHR26402 6 209 2.8E-38 T 22-04-2016 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 Gene3D G3DSA:3.40.50.2300 8 131 4.1E-24 T 22-04-2016 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 210 7.5E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 5.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 5.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 5.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS13415 ed22d07ee289a222fe60223b2944dbd2 221 SMART SM00448 6 120 2.6E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 SUPERFAMILY SSF89796 1 406 5.62E-148 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 Gene3D G3DSA:3.30.1540.10 232 314 1.6E-36 T 22-04-2016 RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 PANTHER PTHR24023:SF593 61 393 6.8E-37 T 22-04-2016 RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 PANTHER PTHR24023 61 393 6.8E-37 T 22-04-2016 RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 Pfam PF02515 CoA-transferase family III 4 382 2.8E-134 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 Gene3D G3DSA:3.40.50.10540 315 406 6.1E-124 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS03645 4b33d10ccd8d2dedcbbb05217f48135c 406 Gene3D G3DSA:3.40.50.10540 2 226 6.1E-124 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS03525 160db829353b145e05db29136889f559 427 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 324 403 3.5E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 Pfam PF00034 Cytochrome c 32 130 5.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 Pfam PF00034 Cytochrome c 189 289 2.9E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 Gene3D G3DSA:1.10.760.10 28 131 1.2E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 Gene3D G3DSA:1.10.760.10 176 288 6.9E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 PANTHER PTHR35008 9 424 8.3E-127 T 22-04-2016 RPIC_RS03525 160db829353b145e05db29136889f559 427 PRINTS PR00605 Class IC cytochrome C signature 381 403 2.781595E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC_RS03525 160db829353b145e05db29136889f559 427 PRINTS PR00605 Class IC cytochrome C signature 330 341 2.781595E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 RPIC_RS03525 160db829353b145e05db29136889f559 427 SUPERFAMILY SSF46626 20 131 1.69E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 PIRSF PIRSF000018 1 427 5.7E-177 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 Gene3D G3DSA:1.10.760.10 325 425 3.7E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 SUPERFAMILY SSF46626 323 416 5.35E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS03525 160db829353b145e05db29136889f559 427 PANTHER PTHR35008:SF3 9 424 8.3E-127 T 22-04-2016 RPIC_RS03525 160db829353b145e05db29136889f559 427 SUPERFAMILY SSF46626 176 289 9.86E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 PANTHER PTHR21221:SF2 1 162 7.6E-55 T 22-04-2016 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 Gene3D G3DSA:2.60.120.480 10 168 4.4E-63 T 22-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 PANTHER PTHR21221 1 162 7.6E-55 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 PIRSF PIRSF017306 9 167 2.4E-45 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 Pfam PF04115 Ureidoglycolate lyase 10 164 5.5E-55 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 Hamap MF_00616 Ureidoglycolate lyase [allA]. 9 168 40.49 T 22-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 RPIC_RS17195 086812d2c100ace488cdfc39560ffd25 175 SUPERFAMILY SSF51182 10 165 1.02E-59 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 Gene3D G3DSA:3.40.50.300 15 171 2.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 SMART SM00382 37 184 4.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 SUPERFAMILY SSF48019 249 367 2.21E-30 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 611 722 5.2E-6 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 PANTHER PTHR11669 1 365 6.8E-164 T 22-04-2016 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 365 4.7E-22 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 Gene3D G3DSA:1.10.8.60 172 247 5.0E-32 T 22-04-2016 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 SUPERFAMILY SSF52540 32 229 9.81E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 Pfam PF13177 DNA polymerase III, delta subunit 20 183 4.1E-38 T 22-04-2016 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 360 3.1E-126 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 Gene3D G3DSA:1.20.272.10 248 365 1.2E-40 T 22-04-2016 RPIC_RS05140 996164945fb7f2ab01e4b84f6325631f 731 PANTHER PTHR11669:SF0 1 365 6.8E-164 T 22-04-2016 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 SUPERFAMILY SSF55031 227 427 3.44E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 Pfam PF07687 Peptidase dimerisation domain 309 422 9.2E-5 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 Gene3D G3DSA:3.30.70.360 333 423 1.6E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 Gene3D G3DSA:3.30.70.360 247 332 2.7E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 Gene3D G3DSA:3.40.630.10 48 233 1.6E-51 T 22-04-2016 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 Gene3D G3DSA:3.40.630.10 464 514 1.6E-51 T 22-04-2016 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 SUPERFAMILY SSF53187 48 227 9.14E-47 T 22-04-2016 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 SUPERFAMILY SSF53187 440 513 9.14E-47 T 22-04-2016 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 51 514 4.2E-80 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 Pfam PF01546 Peptidase family M20/M25/M40 120 509 4.4E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 PANTHER PTHR11014 48 231 4.2E-37 T 22-04-2016 RPIC_RS24270 095bfe8bf2f8dd16d45eeff357a815a2 515 PANTHER PTHR11014 308 515 4.2E-37 T 22-04-2016 RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 PIRSF PIRSF002211 1 60 6.8E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 5.0E-25 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 PANTHER PTHR15892 4 58 1.0E-24 T 22-04-2016 RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 20.308 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 SUPERFAMILY SSF55129 4 58 2.09E-20 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 Gene3D G3DSA:3.30.1390.20 4 59 3.4E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIC_RS16190 78a3712de0fef2ac29a7d2c3eafd633e 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 1.2E-18 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RPIC_RS05995 7db3ec61ffe477c8f5886397592f2e18 173 Gene3D G3DSA:3.90.1170.40 2 138 5.9E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05995 7db3ec61ffe477c8f5886397592f2e18 173 PANTHER PTHR23404 23 164 1.0E-37 T 22-04-2016 RPIC_RS05995 7db3ec61ffe477c8f5886397592f2e18 173 PANTHER PTHR23404:SF2 23 164 1.0E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05995 7db3ec61ffe477c8f5886397592f2e18 173 SUPERFAMILY SSF54690 3 148 6.54E-52 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS05995 7db3ec61ffe477c8f5886397592f2e18 173 Pfam PF02391 MoaE protein 5 118 9.8E-38 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 RPIC_RS17300 502a45344edb11c708d8bb601393a7a9 684 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 17 638 1.5E-206 T 22-04-2016 IPR004814 Oligopeptide transporter OPT RPIC_RS17300 502a45344edb11c708d8bb601393a7a9 684 PANTHER PTHR31645:SF0 14 636 2.2E-132 T 22-04-2016 RPIC_RS17300 502a45344edb11c708d8bb601393a7a9 684 PANTHER PTHR31645 14 636 2.2E-132 T 22-04-2016 RPIC_RS17300 502a45344edb11c708d8bb601393a7a9 684 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 14 636 5.1E-107 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RPIC_RS17300 502a45344edb11c708d8bb601393a7a9 684 Pfam PF03169 OPT oligopeptide transporter protein 17 636 1.7E-103 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 RPIC_RS14170 6a5eb331ca5ba93a4cc387b6a6a493b0 132 SMART SM00363 11 77 3.5E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS14170 6a5eb331ca5ba93a4cc387b6a6a493b0 132 Gene3D G3DSA:3.10.290.10 9 109 1.7E-34 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS14170 6a5eb331ca5ba93a4cc387b6a6a493b0 132 Pfam PF01479 S4 domain 11 57 2.8E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 RPIC_RS14170 6a5eb331ca5ba93a4cc387b6a6a493b0 132 SUPERFAMILY SSF55174 10 107 6.28E-28 T 22-04-2016 RPIC_RS14170 6a5eb331ca5ba93a4cc387b6a6a493b0 132 PIRSF PIRSF016821 8 132 2.3E-41 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 RPIC_RS01535 a1676ff82594bac78bf61de9be1545a5 144 PANTHER PTHR30574:SF1 9 138 8.1E-23 T 22-04-2016 RPIC_RS01535 a1676ff82594bac78bf61de9be1545a5 144 PANTHER PTHR30574 9 138 8.1E-23 T 22-04-2016 RPIC_RS01535 a1676ff82594bac78bf61de9be1545a5 144 Pfam PF04143 Sulphur transport 15 132 2.4E-6 T 22-04-2016 IPR007272 Sulphur transport domain RPIC_RS23075 879d9542cdbd8b6d1aa244ce4c920971 227 SUPERFAMILY SSF51011 40 120 5.25E-20 T 22-04-2016 RPIC_RS23075 879d9542cdbd8b6d1aa244ce4c920971 227 PANTHER PTHR22762 1 218 4.0E-51 T 22-04-2016 RPIC_RS23075 879d9542cdbd8b6d1aa244ce4c920971 227 PANTHER PTHR22762:SF7 1 218 4.0E-51 T 22-04-2016 RPIC_RS23075 879d9542cdbd8b6d1aa244ce4c920971 227 Pfam PF01055 Glycosyl hydrolases family 31 1 125 5.4E-34 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 RPIC_RS13105 dbfcf79c7b137466cce6e4d4ebf72b00 192 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 174 2.9E-50 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 RPIC_RS13105 dbfcf79c7b137466cce6e4d4ebf72b00 192 Gene3D G3DSA:3.40.50.1240 1 170 1.2E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS13105 dbfcf79c7b137466cce6e4d4ebf72b00 192 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 169 5.8E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS13105 dbfcf79c7b137466cce6e4d4ebf72b00 192 PANTHER PTHR23029 39 191 3.3E-18 T 22-04-2016 RPIC_RS13105 dbfcf79c7b137466cce6e4d4ebf72b00 192 SUPERFAMILY SSF53254 1 189 4.28E-33 T 22-04-2016 IPR029033 Histidine phosphatase superfamily RPIC_RS13105 dbfcf79c7b137466cce6e4d4ebf72b00 192 SMART SM00855 2 152 2.7E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 RPIC_RS05790 b94463b43462b1337f1e6b5cf8fd3b31 120 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 101 3.3E-15 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05790 b94463b43462b1337f1e6b5cf8fd3b31 120 SUPERFAMILY SSF88946 22 105 1.18E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05790 b94463b43462b1337f1e6b5cf8fd3b31 120 Pfam PF04542 Sigma-70 region 2 29 91 8.6E-22 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS05790 b94463b43462b1337f1e6b5cf8fd3b31 120 PANTHER PTHR30173 30 118 5.5E-33 T 22-04-2016 RPIC_RS05790 b94463b43462b1337f1e6b5cf8fd3b31 120 Gene3D G3DSA:1.10.1740.10 22 113 4.2E-27 T 22-04-2016 RPIC_RS05790 b94463b43462b1337f1e6b5cf8fd3b31 120 PANTHER PTHR30173:SF22 30 118 5.5E-33 T 22-04-2016 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 Pfam PF00313 'Cold-shock' DNA-binding domain 4 66 8.8E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 Gene3D G3DSA:2.40.50.140 1 65 2.9E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 PANTHER PTHR11544 1 67 2.5E-37 T 22-04-2016 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 PRINTS PR00050 Cold shock protein signature 25 34 4.6E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 PRINTS PR00050 Cold shock protein signature 40 58 4.6E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 PRINTS PR00050 Cold shock protein signature 4 19 4.6E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 PIRSF PIRSF002599 1 67 2.3E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 SUPERFAMILY SSF50249 1 65 2.69E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS13475 f98cfb2bfd174a75e021e0f73d4b4a60 67 SMART SM00357 3 67 2.8E-29 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 RPIC_RS02545 326d20e20c1c8d1dd5ee03c3d3b601f0 406 Gene3D G3DSA:1.10.3210.10 156 321 4.2E-19 T 22-04-2016 IPR006674 HD domain RPIC_RS02545 326d20e20c1c8d1dd5ee03c3d3b601f0 406 SUPERFAMILY SSF109604 157 324 3.81E-30 T 22-04-2016 RPIC_RS02545 326d20e20c1c8d1dd5ee03c3d3b601f0 406 SMART SM00471 160 296 1.4E-5 T 22-04-2016 IPR003607 HD/PDEase domain RPIC_RS02545 326d20e20c1c8d1dd5ee03c3d3b601f0 406 Pfam PF11871 Domain of unknown function (DUF3391) 2 133 2.4E-33 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 RPIC_RS02545 326d20e20c1c8d1dd5ee03c3d3b601f0 406 Pfam PF13487 HD domain 216 277 4.9E-11 T 22-04-2016 RPIC_RS04095 ea2bbb1ff6162b6f472c415c5da79bf1 460 Pfam PF00324 Amino acid permease 12 447 1.5E-102 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RPIC_RS04095 ea2bbb1ff6162b6f472c415c5da79bf1 460 ProSitePatterns PS00218 Amino acid permeases signature. 37 67 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RPIC_RS04095 ea2bbb1ff6162b6f472c415c5da79bf1 460 PIRSF PIRSF006060 1 455 2.0E-64 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS04095 ea2bbb1ff6162b6f472c415c5da79bf1 460 PANTHER PTHR11785:SF351 4 443 2.7E-218 T 22-04-2016 RPIC_RS04095 ea2bbb1ff6162b6f472c415c5da79bf1 460 PANTHER PTHR11785 4 443 2.7E-218 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS11785 fda49cfc04693f64238fa08947a50fb0 205 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.5E-32 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIC_RS11785 fda49cfc04693f64238fa08947a50fb0 205 PANTHER PTHR21043 1 106 3.2E-34 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIC_RS11785 fda49cfc04693f64238fa08947a50fb0 205 SUPERFAMILY SSF81301 1 109 2.13E-35 T 22-04-2016 RPIC_RS11785 fda49cfc04693f64238fa08947a50fb0 205 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 7.6E-25 T 22-04-2016 RPIC_RS11785 fda49cfc04693f64238fa08947a50fb0 205 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.811 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RPIC_RS11785 fda49cfc04693f64238fa08947a50fb0 205 Gene3D G3DSA:3.30.460.10 2 107 1.6E-36 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 SUPERFAMILY SSF54862 1 181 1.05E-49 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 Gene3D G3DSA:3.30.70.20 64 119 4.1E-22 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PANTHER PTHR11938:SF96 1 124 2.5E-90 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PANTHER PTHR11938:SF96 142 178 2.5E-90 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 Pfam PF13247 4Fe-4S dicluster domain 53 164 1.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 Gene3D G3DSA:3.30.70.20 120 176 3.8E-21 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 Gene3D G3DSA:3.30.70.20 3 63 3.8E-21 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PANTHER PTHR11938 1 124 2.5E-90 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PANTHER PTHR11938 142 178 2.5E-90 T 22-04-2016 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PRINTS PR00354 7Fe ferredoxin signature 66 76 9.5E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PRINTS PR00354 7Fe ferredoxin signature 56 66 9.5E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC_RS12730 911284713b35cccd3066b488e12a60e4 222 PRINTS PR00354 7Fe ferredoxin signature 83 100 9.5E-6 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 RPIC_RS08165 e2788051ece899de985b76435ff86547 257 SUPERFAMILY SSF89392 47 183 6.28E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC_RS08165 e2788051ece899de985b76435ff86547 257 SUPERFAMILY SSF89392 215 249 6.28E-5 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC_RS08165 e2788051ece899de985b76435ff86547 257 Pfam PF17131 Outer membrane lipoprotein-sorting protein 77 256 7.7E-56 T 22-04-2016 IPR033399 Putative outer membrane lipoprotein-sorting protein RPIC_RS08165 e2788051ece899de985b76435ff86547 257 Gene3D G3DSA:2.50.20.10 27 256 1.2E-63 T 22-04-2016 RPIC_RS13285 aecb169c75453dc038739c39b98fa85f 400 SUPERFAMILY SSF103473 8 393 1.83E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS13285 aecb169c75453dc038739c39b98fa85f 400 Gene3D G3DSA:1.20.1250.20 19 195 3.3E-26 T 22-04-2016 RPIC_RS13285 aecb169c75453dc038739c39b98fa85f 400 PANTHER PTHR23501 17 395 4.0E-148 T 22-04-2016 RPIC_RS13285 aecb169c75453dc038739c39b98fa85f 400 Pfam PF07690 Major Facilitator Superfamily 23 354 2.8E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS13285 aecb169c75453dc038739c39b98fa85f 400 PANTHER PTHR23501:SF4 17 395 4.0E-148 T 22-04-2016 RPIC_RS13285 aecb169c75453dc038739c39b98fa85f 400 Gene3D G3DSA:1.20.1250.20 216 390 7.1E-9 T 22-04-2016 RPIC_RS14545 c155ab635f53ddd81dd2548c29bb4b92 387 SUPERFAMILY SSF56300 159 384 7.19E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS14545 c155ab635f53ddd81dd2548c29bb4b92 387 PANTHER PTHR31302:SF7 119 387 1.2E-80 T 22-04-2016 RPIC_RS14545 c155ab635f53ddd81dd2548c29bb4b92 387 PANTHER PTHR31302 119 387 1.2E-80 T 22-04-2016 RPIC_RS14545 c155ab635f53ddd81dd2548c29bb4b92 387 Pfam PF00149 Calcineurin-like phosphoesterase 159 327 3.6E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS14545 c155ab635f53ddd81dd2548c29bb4b92 387 Gene3D G3DSA:3.60.21.10 159 335 2.8E-24 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS17965 9878df183e15c0145d5ff31ca1cba4c3 287 SUPERFAMILY SSF103481 44 140 3.4E-6 T 22-04-2016 RPIC_RS17965 9878df183e15c0145d5ff31ca1cba4c3 287 SUPERFAMILY SSF103481 190 284 4.45E-13 T 22-04-2016 RPIC_RS17965 9878df183e15c0145d5ff31ca1cba4c3 287 Pfam PF00892 EamA-like transporter family 153 283 6.1E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS17965 9878df183e15c0145d5ff31ca1cba4c3 287 PANTHER PTHR32322 1 287 1.1E-30 T 22-04-2016 RPIC_RS00235 09d149b7ba800fc0bef38028eb44b142 132 SUPERFAMILY SSF55620 13 127 4.06E-27 T 22-04-2016 RPIC_RS00235 09d149b7ba800fc0bef38028eb44b142 132 Gene3D G3DSA:3.30.1130.10 15 127 2.8E-30 T 22-04-2016 RPIC_RS00235 09d149b7ba800fc0bef38028eb44b142 132 Pfam PF02152 Dihydroneopterin aldolase 17 125 1.5E-23 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS00235 09d149b7ba800fc0bef38028eb44b142 132 TIGRFAM TIGR00526 folB_dom: FolB domain 17 129 1.1E-12 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS00235 09d149b7ba800fc0bef38028eb44b142 132 SMART SM00905 16 127 2.1E-27 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 SUPERFAMILY SSF54292 4 80 4.46E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 SUPERFAMILY SSF47741 86 155 1.06E-33 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 61 1.4E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 Gene3D G3DSA:1.10.150.120 77 162 1.3E-37 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 Pfam PF01799 [2Fe-2S] binding domain 75 147 9.3E-31 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 Gene3D G3DSA:3.10.20.30 4 76 1.4E-29 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 PANTHER PTHR11908 1 146 1.7E-48 T 22-04-2016 RPIC_RS06725 119d3f1b5ae5a24ffd84a0ef4aa397ad 175 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 22 516 2.5E-219 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 SMART SM00382 260 381 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 Gene3D G3DSA:3.30.450.90 103 232 6.4E-53 T 22-04-2016 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 PANTHER PTHR30258 19 518 5.6E-223 T 22-04-2016 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 SUPERFAMILY SSF52540 109 516 2.23E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 PANTHER PTHR30258:SF9 19 518 5.6E-223 T 22-04-2016 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 Pfam PF00437 Type II/IV secretion system protein 136 399 7.6E-83 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 SUPERFAMILY SSF160246 22 85 8.24E-8 T 22-04-2016 RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 Gene3D G3DSA:3.40.50.300 238 516 1.2E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16835 aa7fc2a9d9f35b33869241ad8c0654f1 518 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 327 341 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 PANTHER PTHR23407:SF1 11 197 3.8E-38 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 SUPERFAMILY SSF100950 19 199 3.63E-43 T 22-04-2016 RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 PIRSF PIRSF006806 15 199 8.7E-31 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 21 197 1.5E-37 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 Gene3D G3DSA:3.40.50.10420 20 199 3.6E-44 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 PANTHER PTHR23407 11 197 3.8E-38 T 22-04-2016 RPIC_RS18155 182020e8a9adf3041437217514049bb8 201 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 21 197 7.3E-29 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 PANTHER PTHR11938:SF64 14 152 1.3E-47 T 22-04-2016 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 Gene3D G3DSA:3.30.70.20 22 100 8.3E-8 T 22-04-2016 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 Pfam PF14697 4Fe-4S dicluster domain 87 141 7.1E-18 T 22-04-2016 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 94 105 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 Gene3D G3DSA:3.30.70.20 101 147 1.1E-15 T 22-04-2016 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 PANTHER PTHR11938 14 152 1.3E-47 T 22-04-2016 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 9 160 2.0E-67 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 Pfam PF04060 Putative Fe-S cluster 20 52 1.3E-11 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 SUPERFAMILY SSF54862 15 148 1.71E-29 T 22-04-2016 RPIC_RS04285 2704f1c109d4a58c108f3e5956737dfe 276 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 436 42.166 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 Pfam PF00815 Histidinol dehydrogenase 28 436 4.9E-168 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 38 435 1.9E-160 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PIRSF PIRSF000099 3 438 2.0E-158 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 Gene3D G3DSA:3.40.50.1980 31 248 1.1E-78 T 22-04-2016 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 238 270 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 SUPERFAMILY SSF53720 31 436 7.26E-86 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 260 279 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 209 234 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 370 388 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 179 205 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 329 354 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 238 259 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PRINTS PR00083 Histidinol dehydrogenase signature 145 171 4.0E-83 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 RPIC_RS15940 4e9c7f084a182e8e55f3025c98895432 442 PANTHER PTHR21256 3 442 1.7E-201 T 22-04-2016 RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 PANTHER PTHR11260:SF192 153 217 3.9E-39 T 22-04-2016 RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 PANTHER PTHR11260:SF192 1 131 3.9E-39 T 22-04-2016 RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 SUPERFAMILY SSF52833 3 98 1.19E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 Gene3D G3DSA:3.40.30.10 3 90 1.4E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 Gene3D G3DSA:1.20.1050.10 91 220 7.7E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 80 2.7E-13 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 SUPERFAMILY SSF47616 149 252 1.91E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 Pfam PF13410 Glutathione S-transferase, C-terminal domain 159 216 1.1E-10 T 22-04-2016 RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 PANTHER PTHR11260 153 217 3.9E-39 T 22-04-2016 RPIC_RS07120 e3cefe0f39e6af6ca231df4c96f3ea4b 318 PANTHER PTHR11260 1 131 3.9E-39 T 22-04-2016 RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 PANTHER PTHR12110:SF3 1 253 1.7E-92 T 22-04-2016 RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 SUPERFAMILY SSF51658 1 255 9.45E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 PANTHER PTHR12110 1 253 1.7E-92 T 22-04-2016 RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 7.7E-34 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 Gene3D G3DSA:3.20.20.150 1 254 1.3E-89 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 3 253 3.8E-113 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 RPIC_RS17235 3c6bd01e4247a2eedcf9c85b3ddaf22e 260 PIRSF PIRSF006241 1 260 2.1E-96 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RPIC_RS18415 6a7896600cf109697cf5343566338454 448 SMART SM00387 312 431 7.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18415 6a7896600cf109697cf5343566338454 448 Gene3D G3DSA:3.30.565.10 290 429 2.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18415 6a7896600cf109697cf5343566338454 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS18415 6a7896600cf109697cf5343566338454 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS18415 6a7896600cf109697cf5343566338454 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.1E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS18415 6a7896600cf109697cf5343566338454 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 428 1.3E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18415 6a7896600cf109697cf5343566338454 448 SUPERFAMILY SSF55874 288 429 3.01E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS18415 6a7896600cf109697cf5343566338454 448 PANTHER PTHR24423 183 434 1.2E-16 T 22-04-2016 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 3.9E-51 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 SUPERFAMILY SSF63380 96 202 2.89E-31 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 PANTHER PTHR21098 1 200 5.5E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 SUPERFAMILY SSF63380 1 92 4.25E-16 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 Pfam PF00677 Lumazine binding domain 3 89 1.2E-13 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 Pfam PF00677 Lumazine binding domain 102 190 2.9E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 Gene3D G3DSA:2.40.30.20 107 206 2.5E-31 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 Gene3D G3DSA:2.40.30.20 5 106 2.2E-21 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RPIC_RS03240 929af8187f85f29820012dcb93d6fff9 217 PIRSF PIRSF000498 1 208 1.2E-67 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 492 2.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 PANTHER PTHR24423 196 492 1.5E-63 T 22-04-2016 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 PANTHER PTHR24423 29 40 1.5E-63 T 22-04-2016 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 SUPERFAMILY SSF47384 254 338 2.35E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 SMART SM00388 270 338 6.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 Gene3D G3DSA:3.30.565.10 340 492 2.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 Gene3D G3DSA:1.10.287.130 265 334 3.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 Pfam PF00672 HAMP domain 183 258 3.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 SMART SM00387 384 496 4.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 271 338 2.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 SUPERFAMILY SSF55874 328 492 4.06E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 435 6.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 474 6.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS01430 22a5c319d6251e5ebc6761b16680beac 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 493 6.1E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 PANTHER PTHR24220:SF358 13 253 3.9E-90 T 22-04-2016 RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 PANTHER PTHR24220 13 253 3.9E-90 T 22-04-2016 RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 Gene3D G3DSA:3.40.50.300 10 250 5.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 Pfam PF00005 ABC transporter 28 183 9.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 252 2.6E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 SMART SM00382 36 230 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS07185 826e22a66f55efa1d02f87a32d05768d 266 SUPERFAMILY SSF52540 11 252 4.66E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:3.40.50.300 583 674 2.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:3.40.50.300 289 390 2.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:1.10.10.160 112 184 6.5E-20 T 22-04-2016 IPR013986 DExx box DNA helicase domain RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:1.10.486.10 554 572 1.9E-43 T 22-04-2016 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:1.10.486.10 391 514 1.9E-43 T 22-04-2016 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:3.40.50.300 2 108 2.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Gene3D G3DSA:3.40.50.300 185 288 2.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 274 4.5E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 PANTHER PTHR11070 560 674 1.4E-206 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 PANTHER PTHR11070 1 510 1.4E-206 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 PANTHER PTHR11070:SF7 560 674 1.4E-206 T 22-04-2016 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 PANTHER PTHR11070:SF7 1 510 1.4E-206 T 22-04-2016 RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 SUPERFAMILY SSF52540 554 672 1.52E-173 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 SUPERFAMILY SSF52540 1 514 1.52E-173 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12030 d79e954b5accf0d6261dcb25287966a6 786 Pfam PF13361 UvrD-like helicase C-terminal domain 280 647 3.7E-71 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS05675 b57036c9bb0b1afd4fc8d6194e73dedb 219 SUPERFAMILY SSF55729 17 199 3.87E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS05675 b57036c9bb0b1afd4fc8d6194e73dedb 219 Gene3D G3DSA:3.40.630.30 15 199 2.3E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS05675 b57036c9bb0b1afd4fc8d6194e73dedb 219 Pfam PF00583 Acetyltransferase (GNAT) family 135 193 2.8E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 10 508 1.8E-208 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 PANTHER PTHR10362 9 504 4.1E-234 T 22-04-2016 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 SUPERFAMILY SSF48557 3 504 1.65E-186 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 145 161 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 Pfam PF00221 Aromatic amino acid lyase 18 476 4.2E-182 T 22-04-2016 IPR001106 Aromatic amino acid lyase RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 9 510 45.917 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 Gene3D G3DSA:1.10.275.10 3 203 6.6E-70 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 PANTHER PTHR10362:SF7 9 504 4.1E-234 T 22-04-2016 RPIC_RS14190 c435c27305c1da71dff2dca28dacef0a 518 Gene3D G3DSA:1.20.200.10 204 511 8.7E-125 T 22-04-2016 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 Gene3D G3DSA:3.20.20.70 2 289 6.7E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 PIRSF PIRSF001365 1 296 2.5E-87 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 290 42.813 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 SUPERFAMILY SSF51569 2 288 1.03E-92 T 22-04-2016 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 3.0E-22 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 3.0E-22 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 3.0E-22 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 3.0E-22 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 289 2.5E-71 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 PANTHER PTHR12128 5 289 1.4E-96 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 SMART SM01130 4 292 1.3E-111 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02760 ff7673bdb049a5a361e3b5c6518bdf2c 298 Pfam PF00701 Dihydrodipicolinate synthetase family 5 288 6.2E-80 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 Pfam PF00155 Aminotransferase class I and II 174 463 3.5E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 SUPERFAMILY SSF46785 18 87 8.44E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 PANTHER PTHR11751:SF10 122 507 6.3E-125 T 22-04-2016 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 SUPERFAMILY SSF53383 143 504 1.6E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 Gene3D G3DSA:1.10.10.10 18 84 7.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 Gene3D G3DSA:3.40.640.10 171 393 7.7E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 6.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 SMART SM00345 24 83 2.0E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 PANTHER PTHR11751 122 507 6.3E-125 T 22-04-2016 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 57 73 3.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS18455 4313869c23e84541f8f4c467faf77240 507 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 57 3.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS17800 5299a7223725a90b79a065c525110fb0 590 PANTHER PTHR30607 1 213 1.1E-302 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC_RS17800 5299a7223725a90b79a065c525110fb0 590 PANTHER PTHR30607 243 589 1.1E-302 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC_RS17800 5299a7223725a90b79a065c525110fb0 590 Pfam PF03814 Potassium-transporting ATPase A subunit 10 588 6.8E-249 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC_RS17800 5299a7223725a90b79a065c525110fb0 590 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 240 589 1.1E-163 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC_RS17800 5299a7223725a90b79a065c525110fb0 590 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 590 36.464 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC_RS17800 5299a7223725a90b79a065c525110fb0 590 PIRSF PIRSF001294 1 590 7.9E-247 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RPIC_RS15445 386939dba8fd4985e03bd245ebb8d6ce 219 Pfam PF01928 CYTH domain 3 208 2.3E-39 T 22-04-2016 IPR023577 CYTH domain RPIC_RS15445 386939dba8fd4985e03bd245ebb8d6ce 219 PANTHER PTHR39569 2 210 6.8E-38 T 22-04-2016 RPIC_RS15445 386939dba8fd4985e03bd245ebb8d6ce 219 SUPERFAMILY SSF55154 1 213 5.89E-42 T 22-04-2016 IPR033469 CYTH-like domain RPIC_RS15445 386939dba8fd4985e03bd245ebb8d6ce 219 Gene3D G3DSA:2.40.320.10 1 213 2.8E-33 T 22-04-2016 IPR023577 CYTH domain RPIC_RS15445 386939dba8fd4985e03bd245ebb8d6ce 219 PANTHER PTHR39569:SF1 2 210 6.8E-38 T 22-04-2016 RPIC_RS15445 386939dba8fd4985e03bd245ebb8d6ce 219 SMART SM01118 2 214 3.8E-31 T 22-04-2016 IPR023577 CYTH domain RPIC_RS00830 548912762eeb7b1595acbc4a85742e6b 221 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 42 189 7.7E-11 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC_RS00830 548912762eeb7b1595acbc4a85742e6b 221 Gene3D G3DSA:3.40.50.10610 25 198 1.3E-36 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC_RS00830 548912762eeb7b1595acbc4a85742e6b 221 SUPERFAMILY SSF159594 36 199 1.67E-30 T 22-04-2016 RPIC_RS07320 7fb6d8cfaf73a1067af5b4ad73061ba8 94 PANTHER PTHR33755 1 92 8.8E-20 T 22-04-2016 RPIC_RS07320 7fb6d8cfaf73a1067af5b4ad73061ba8 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 1.9E-18 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS07320 7fb6d8cfaf73a1067af5b4ad73061ba8 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 85 7.5E-13 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS09090 7fb6d8cfaf73a1067af5b4ad73061ba8 94 PANTHER PTHR33755 1 92 8.8E-20 T 22-04-2016 RPIC_RS09090 7fb6d8cfaf73a1067af5b4ad73061ba8 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 1.9E-18 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS09090 7fb6d8cfaf73a1067af5b4ad73061ba8 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 85 7.5E-13 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS01855 06eccdf88515658d6d24ed4c56c9b283 379 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 368 6.6E-50 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RPIC_RS01855 06eccdf88515658d6d24ed4c56c9b283 379 SUPERFAMILY SSF51695 43 373 1.23E-77 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC_RS01855 06eccdf88515658d6d24ed4c56c9b283 379 Gene3D G3DSA:3.20.20.190 42 374 2.1E-93 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC_RS01855 06eccdf88515658d6d24ed4c56c9b283 379 PANTHER PTHR23344:SF7 44 372 7.7E-109 T 22-04-2016 RPIC_RS01855 06eccdf88515658d6d24ed4c56c9b283 379 PANTHER PTHR23344 44 372 7.7E-109 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RPIC_RS09605 e3b5120ed06b526ffbc1cc5d6cb8888f 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 78 264 1.5E-5 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09605 e3b5120ed06b526ffbc1cc5d6cb8888f 267 Gene3D G3DSA:3.90.850.10 1 266 5.5E-86 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09605 e3b5120ed06b526ffbc1cc5d6cb8888f 267 PANTHER PTHR30143 1 266 2.1E-95 T 22-04-2016 RPIC_RS09605 e3b5120ed06b526ffbc1cc5d6cb8888f 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 266 5.2E-137 T 22-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 RPIC_RS09605 e3b5120ed06b526ffbc1cc5d6cb8888f 267 SUPERFAMILY SSF56529 2 266 2.14E-77 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09540 e38cf9358f4411d8fa803bf5411158a6 193 TIGRFAM TIGR01841 phasin: phasin family protein 25 112 2.5E-29 T 22-04-2016 IPR010127 Phasin, subfamily 1 RPIC_RS09540 e38cf9358f4411d8fa803bf5411158a6 193 Pfam PF09361 Phasin protein 5 104 2.6E-31 T 22-04-2016 IPR018968 Phasin RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 PANTHER PTHR33154 13 120 1.3E-27 T 22-04-2016 RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 47 4.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 79 94 4.0E-12 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 Pfam PF01022 Bacterial regulatory protein, arsR family 38 82 4.1E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 SUPERFAMILY SSF46785 26 111 1.75E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 SMART SM00418 30 108 6.1E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC_RS09910 58b35415da809baf0f6227988ab9723e 121 Gene3D G3DSA:1.10.10.10 20 112 8.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03570 b10a7e69526bdc4ef64291181047bbb5 249 Gene3D G3DSA:3.10.490.10 51 221 5.6E-24 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC_RS03570 b10a7e69526bdc4ef64291181047bbb5 249 PANTHER PTHR12192 34 227 2.9E-46 T 22-04-2016 IPR006840 ChaC-like protein RPIC_RS03570 b10a7e69526bdc4ef64291181047bbb5 249 SUPERFAMILY SSF110857 54 165 1.0E-11 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC_RS03570 b10a7e69526bdc4ef64291181047bbb5 249 PANTHER PTHR12192:SF9 34 227 2.9E-46 T 22-04-2016 RPIC_RS03570 b10a7e69526bdc4ef64291181047bbb5 249 Pfam PF04752 ChaC-like protein 54 216 3.2E-39 T 22-04-2016 IPR006840 ChaC-like protein RPIC_RS11220 d1de36ce5eb4ed47b8b9c558c6e2d12a 311 Pfam PF03755 YicC-like family, N-terminal region 2 165 3.3E-40 T 22-04-2016 IPR013527 YicC-like, N-terminal RPIC_RS11220 d1de36ce5eb4ed47b8b9c558c6e2d12a 311 Pfam PF08340 Domain of unknown function (DUF1732) 227 311 2.8E-32 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 RPIC_RS11220 d1de36ce5eb4ed47b8b9c558c6e2d12a 311 PANTHER PTHR30636 1 311 1.4E-83 T 22-04-2016 RPIC_RS11220 d1de36ce5eb4ed47b8b9c558c6e2d12a 311 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 311 9.1E-72 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 RPIC_RS10355 89d07e5fdd4ff6001475c0b1fe3c1808 113 SUPERFAMILY SSF51182 25 101 2.47E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS10355 89d07e5fdd4ff6001475c0b1fe3c1808 113 Gene3D G3DSA:2.60.120.10 13 110 1.1E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS10385 5bc4d7e0a48f3159547606f765fa65a6 141 SUPERFAMILY SSF55718 18 131 2.83E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC_RS10385 5bc4d7e0a48f3159547606f765fa65a6 141 PANTHER PTHR10094 45 135 8.2E-16 T 22-04-2016 RPIC_RS10385 5bc4d7e0a48f3159547606f765fa65a6 141 PANTHER PTHR10094:SF16 45 135 8.2E-16 T 22-04-2016 RPIC_RS10385 5bc4d7e0a48f3159547606f765fa65a6 141 Pfam PF02036 SCP-2 sterol transfer family 45 125 2.6E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC_RS10385 5bc4d7e0a48f3159547606f765fa65a6 141 Gene3D G3DSA:3.30.1050.10 76 130 2.7E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain RPIC_RS13030 a00217bc201a878962199313a32bd6d0 130 Pfam PF04956 TrbC/VIRB2 family 30 120 4.8E-25 T 22-04-2016 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 Pfam PF04055 Radical SAM superfamily 81 252 5.0E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 PIRSF PIRSF000167 24 478 7.3E-169 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 SUPERFAMILY SSF102114 25 468 1.83E-139 T 22-04-2016 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 SMART SM00729 75 296 6.4E-53 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 PANTHER PTHR13932:SF6 12 475 6.8E-216 T 22-04-2016 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 Pfam PF06969 HemN C-terminal domain 387 455 4.8E-12 T 22-04-2016 IPR010723 HemN, C-terminal RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 28 471 9.9E-174 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 Gene3D G3DSA:3.80.30.20 76 301 4.4E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe RPIC_RS17260 2d99e63aff73ae6060bf25767791ed86 494 PANTHER PTHR13932 12 475 6.8E-216 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 SUPERFAMILY SSF49503 59 198 1.19E-41 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 Pfam PF00394 Multicopper oxidase 185 361 6.3E-26 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 ProSitePatterns PS00079 Multicopper oxidases signature 1. 581 601 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 ProSitePatterns PS00079 Multicopper oxidases signature 1. 150 170 - T 22-04-2016 IPR033138 Multicopper oxidases, conserved site RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 ProSitePatterns PS00080 Multicopper oxidases signature 2. 586 597 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 Pfam PF07731 Multicopper oxidase 487 603 4.2E-22 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 Gene3D G3DSA:2.60.40.420 483 603 5.4E-30 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 Pfam PF07732 Multicopper oxidase 65 175 1.5E-41 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 PANTHER PTHR11709 461 603 1.8E-98 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 PANTHER PTHR11709 60 219 1.8E-98 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 PANTHER PTHR11709 260 372 1.8E-98 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 11 603 1.9E-295 T 22-04-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 PANTHER PTHR11709:SF33 461 603 1.8E-98 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 PANTHER PTHR11709:SF33 60 219 1.8E-98 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 PANTHER PTHR11709:SF33 260 372 1.8E-98 T 22-04-2016 RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 Gene3D G3DSA:2.60.40.420 58 173 1.4E-35 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 SUPERFAMILY SSF49503 182 396 6.1E-48 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 Gene3D G3DSA:2.60.40.420 182 383 4.1E-43 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09020 46adb85c56e84e849e350911fb87818e 604 SUPERFAMILY SSF49503 442 603 1.01E-32 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PANTHER PTHR22912:SF158 5 337 8.4E-87 T 22-04-2016 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 Gene3D G3DSA:3.50.50.60 265 338 4.5E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 Gene3D G3DSA:3.50.50.60 17 142 4.5E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 SUPERFAMILY SSF51905 9 320 1.19E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 Gene3D G3DSA:3.50.50.60 147 261 1.1E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PANTHER PTHR22912 5 337 8.4E-87 T 22-04-2016 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 Hamap MF_01685 Ferredoxin--NADP reductase. 18 347 39.051 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 20 42 3.49E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 77 87 3.49E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 136 3.49E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 167 191 3.49E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 294 312 3.49E-22 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 20 310 1.8E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 2.55E-15 T 22-04-2016 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 2.55E-15 T 22-04-2016 RPIC_RS04845 41db71e827360d139e7211fc5bee9e6b 359 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 2.55E-15 T 22-04-2016 RPIC_RS02380 10ed7988fa393275e925dd16e9d4d440 146 Pfam PF13474 SnoaL-like domain 12 130 2.8E-21 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC_RS02380 10ed7988fa393275e925dd16e9d4d440 146 SUPERFAMILY SSF54427 1 127 6.43E-21 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS02380 10ed7988fa393275e925dd16e9d4d440 146 Gene3D G3DSA:3.10.450.50 7 133 1.6E-13 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS05740 62d81ae58ab1213777c79a0bd1ba9dca 297 PANTHER PTHR10366 3 297 5.5E-97 T 22-04-2016 RPIC_RS05740 62d81ae58ab1213777c79a0bd1ba9dca 297 Gene3D G3DSA:3.90.25.10 199 295 1.4E-13 T 22-04-2016 RPIC_RS05740 62d81ae58ab1213777c79a0bd1ba9dca 297 PANTHER PTHR10366:SF325 3 297 5.5E-97 T 22-04-2016 RPIC_RS05740 62d81ae58ab1213777c79a0bd1ba9dca 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 227 3.8E-48 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC_RS05740 62d81ae58ab1213777c79a0bd1ba9dca 297 Gene3D G3DSA:3.40.50.720 2 198 3.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05740 62d81ae58ab1213777c79a0bd1ba9dca 297 SUPERFAMILY SSF51735 1 294 2.29E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS09640 98480b9ed6638eee916e11273d9fc8d9 476 PIRSF PIRSF006060 7 474 3.9E-95 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS09640 98480b9ed6638eee916e11273d9fc8d9 476 PANTHER PTHR11785 22 459 3.3E-215 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS09640 98480b9ed6638eee916e11273d9fc8d9 476 PANTHER PTHR11785:SF405 22 459 3.3E-215 T 22-04-2016 RPIC_RS09640 98480b9ed6638eee916e11273d9fc8d9 476 Pfam PF13520 Amino acid permease 26 429 1.7E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 301 7.4E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 PANTHER PTHR11562 14 309 6.4E-84 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 Gene3D G3DSA:1.20.1510.10 19 216 5.2E-44 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 Pfam PF01545 Cation efflux family 24 216 4.5E-45 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 SUPERFAMILY SSF161111 15 217 1.96E-53 T 22-04-2016 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 PANTHER PTHR11562:SF18 14 309 6.4E-84 T 22-04-2016 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 SUPERFAMILY SSF160240 219 300 5.1E-19 T 22-04-2016 RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 Pfam PF16916 Dimerisation domain of Zinc Transporter 221 299 3.1E-19 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS16620 1aabcfebb6acf0a987450f321dde9e25 382 Gene3D G3DSA:3.30.70.1350 217 300 6.1E-23 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 PANTHER PTHR30622:SF3 2 136 2.7E-123 T 22-04-2016 RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 PANTHER PTHR30622:SF3 156 292 2.7E-123 T 22-04-2016 RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 Pfam PF02673 Bacitracin resistance protein BacA 9 279 2.1E-82 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 277 2.8E-70 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 PANTHER PTHR30622 2 136 2.7E-123 T 22-04-2016 RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 PANTHER PTHR30622 156 292 2.7E-123 T 22-04-2016 RPIC_RS03175 6ecf52281a477a011b423117d5797b1f 293 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 284 18.101 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RPIC_RS07210 075037141f7f03a0b25a38b047d562e3 529 PANTHER PTHR32057 45 529 1.7E-192 T 22-04-2016 RPIC_RS07210 075037141f7f03a0b25a38b047d562e3 529 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 54 497 1.5E-131 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RPIC_RS07210 075037141f7f03a0b25a38b047d562e3 529 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 21 515 44.889 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PANTHER PTHR10055 242 399 9.1E-161 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PANTHER PTHR10055 5 171 9.1E-161 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 Gene3D G3DSA:3.40.50.620 241 274 2.3E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 Gene3D G3DSA:3.40.50.620 4 170 2.3E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 SUPERFAMILY SSF52374 3 172 1.01E-87 T 22-04-2016 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 SUPERFAMILY SSF52374 243 397 1.01E-87 T 22-04-2016 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 Gene3D G3DSA:1.10.240.10 275 364 8.4E-32 T 22-04-2016 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 34.73 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 Pfam PF00579 tRNA synthetases class I (W and Y) 244 344 1.1E-10 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 170 9.1E-48 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 173 7.0E-56 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PANTHER PTHR10055:SF6 242 399 9.1E-161 T 22-04-2016 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PANTHER PTHR10055:SF6 5 171 9.1E-161 T 22-04-2016 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 6.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC_RS04865 9075b4f02addb8ad9a4d5f81b88067b9 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 6.3E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 127 133 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 71 9.7E-8 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 PANTHER PTHR10815 1 159 2.0E-47 T 22-04-2016 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 157 2.2E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 Gene3D G3DSA:1.10.10.10 75 159 1.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 PANTHER PTHR10815:SF5 1 159 2.0E-47 T 22-04-2016 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 76 156 6.5E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 SUPERFAMILY SSF46767 75 158 7.32E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13665 3860f551dd0fcfe36248f501c7b27295 182 SUPERFAMILY SSF53155 1 80 3.73E-18 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC_RS08525 759a10b53f295b7ee2c024055d2708f1 243 PANTHER PTHR39200 135 240 2.5E-19 T 22-04-2016 RPIC_RS08525 759a10b53f295b7ee2c024055d2708f1 243 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 35 227 2.4E-28 T 22-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain RPIC_RS08525 759a10b53f295b7ee2c024055d2708f1 243 PANTHER PTHR39200:SF1 135 240 2.5E-19 T 22-04-2016 RPIC_RS04205 9e76e221e5e8c1e623714f999fb41a70 126 Gene3D G3DSA:3.40.470.10 1 125 6.5E-20 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS04205 9e76e221e5e8c1e623714f999fb41a70 126 SUPERFAMILY SSF52141 1 125 1.57E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS04205 9e76e221e5e8c1e623714f999fb41a70 126 Pfam PF03167 Uracil DNA glycosylase superfamily 1 122 7.4E-5 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like RPIC_RS04205 9e76e221e5e8c1e623714f999fb41a70 126 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 1 118 1.2E-29 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase RPIC_RS00655 b3c7832b30fc00aac07b594fd33ec93c 236 SUPERFAMILY SSF110997 158 233 4.18E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS00655 b3c7832b30fc00aac07b594fd33ec93c 236 Gene3D G3DSA:3.30.70.1070 154 234 3.3E-25 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS00655 b3c7832b30fc00aac07b594fd33ec93c 236 Pfam PF05036 Sporulation related domain 158 232 1.6E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 RPIC_RS06695 3c06e3082165e0f60b28a837f0146d9e 343 Gene3D G3DSA:3.40.50.20 164 230 1.7E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain RPIC_RS06695 3c06e3082165e0f60b28a837f0146d9e 343 Pfam PF02625 XdhC and CoxI family 15 82 1.1E-23 T 22-04-2016 IPR003777 XdhC- CoxI RPIC_RS06695 3c06e3082165e0f60b28a837f0146d9e 343 PANTHER PTHR30388:SF4 5 343 2.9E-86 T 22-04-2016 RPIC_RS06695 3c06e3082165e0f60b28a837f0146d9e 343 PANTHER PTHR30388 5 343 2.9E-86 T 22-04-2016 RPIC_RS06695 3c06e3082165e0f60b28a837f0146d9e 343 Pfam PF13478 XdhC Rossmann domain 165 306 4.2E-38 T 22-04-2016 IPR027051 XdhC Rossmann domain RPIC_RS03940 007b1deee9d69790b6e7070d01199d36 84 Gene3D G3DSA:3.30.1320.10 1 77 5.8E-31 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RPIC_RS03940 007b1deee9d69790b6e7070d01199d36 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.504 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03940 007b1deee9d69790b6e7070d01199d36 84 Pfam PF00886 Ribosomal protein S16 8 68 1.3E-22 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03940 007b1deee9d69790b6e7070d01199d36 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 77 2.7E-25 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03940 007b1deee9d69790b6e7070d01199d36 84 PANTHER PTHR12919 1 76 3.8E-36 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS03940 007b1deee9d69790b6e7070d01199d36 84 SUPERFAMILY SSF54565 1 76 1.44E-27 T 22-04-2016 IPR023803 Ribosomal protein S16 domain RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 165 8.4E-50 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 PIRSF PIRSF001467 1 168 1.4E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 Gene3D G3DSA:2.40.100.10 2 167 2.6E-56 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 PANTHER PTHR11071 5 168 1.5E-75 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 9.5E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 9.5E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 9.5E-13 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 SUPERFAMILY SSF50891 4 167 2.48E-60 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS04970 b2042e5d9ade8fea8cbe24e09a8428a2 168 PANTHER PTHR11071:SF192 5 168 1.5E-75 T 22-04-2016 RPIC_RS11655 7512c70ebebd56fca7463a55409a2f43 210 Pfam PF11180 Protein of unknown function (DUF2968) 26 202 2.5E-60 T 22-04-2016 IPR021350 Protein of unknown function DUF2968 RPIC_RS11685 3a6e7ef2fbb9de16e1e06bae6151efb9 247 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 241 43.546 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RPIC_RS11685 3a6e7ef2fbb9de16e1e06bae6151efb9 247 SUPERFAMILY SSF88713 3 244 1.93E-91 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS11685 3a6e7ef2fbb9de16e1e06bae6151efb9 247 PANTHER PTHR30292:SF0 1 247 2.6E-118 T 22-04-2016 RPIC_RS11685 3a6e7ef2fbb9de16e1e06bae6151efb9 247 Pfam PF03746 LamB/YcsF family 4 236 1.3E-92 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RPIC_RS11685 3a6e7ef2fbb9de16e1e06bae6151efb9 247 PANTHER PTHR30292 1 247 2.6E-118 T 22-04-2016 RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 SUPERFAMILY SSF55729 86 244 4.66E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 PANTHER PTHR21367 20 246 2.0E-57 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 1.1E-17 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 PIRSF PIRSF037208 3 255 5.3E-93 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 3 246 44.479 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 PANTHER PTHR21367:SF0 20 246 2.0E-57 T 22-04-2016 RPIC_RS09485 5da7f80e4fc18f3c0edf5803b73d9b74 255 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 237 2.0E-37 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 SUPERFAMILY SSF54506 4 285 2.27E-63 T 22-04-2016 RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 Pfam PF02567 Phenazine biosynthesis-like protein 10 269 8.6E-45 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 Gene3D G3DSA:3.10.310.10 5 117 1.4E-32 T 22-04-2016 RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 PANTHER PTHR13774:SF15 1 285 1.9E-59 T 22-04-2016 RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 PANTHER PTHR13774 1 285 1.9E-59 T 22-04-2016 RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 271 7.9E-47 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 PIRSF PIRSF016184 1 285 1.4E-65 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- RPIC_RS00440 7372273a81106b2331ca1502c3cfe3dd 285 Gene3D G3DSA:3.10.310.10 118 271 9.4E-34 T 22-04-2016 RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 SUPERFAMILY SSF48498 106 223 6.88E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 Gene3D G3DSA:1.10.357.10 15 223 2.7E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 PANTHER PTHR30055 8 229 1.4E-17 T 22-04-2016 RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 6.9E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 5.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 5.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS00255 005312649f848a8abbef4cd751859d00 250 SUPERFAMILY SSF46689 21 89 3.03E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16550 6c0798f621105eceb6be76f904405eb7 96 Pfam PF06629 MltA-interacting protein MipA 2 96 1.3E-20 T 22-04-2016 IPR010583 MltA-interacting MipA RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 Gene3D G3DSA:1.10.3130.10 1 64 7.9E-26 T 22-04-2016 RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 SUPERFAMILY SSF51161 3 170 1.66E-52 T 22-04-2016 IPR011004 Trimeric LpxA-like RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 167 6.3E-72 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 PANTHER PTHR23416:SF55 1 230 1.7E-91 T 22-04-2016 RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 3.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 9.9E-6 T 22-04-2016 IPR001451 Hexapeptide repeat RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 PANTHER PTHR23416 1 230 1.7E-91 T 22-04-2016 RPIC_RS04960 5acb2b0213335a8c8852734c4fab404e 248 Gene3D G3DSA:2.160.10.10 65 183 1.8E-36 T 22-04-2016 RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 Gene3D G3DSA:3.10.580.10 145 268 5.3E-19 T 22-04-2016 RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 SUPERFAMILY SSF51206 10 131 2.23E-14 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 Gene3D G3DSA:2.60.120.10 12 129 9.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 110 4.1E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 SMART SM00116 220 267 2.1E-5 T 22-04-2016 IPR000644 CBS domain RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 462 602 4.0E-37 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 SUPERFAMILY SSF54631 146 268 1.1E-18 T 22-04-2016 RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 Pfam PF00571 CBS domain 220 267 2.0E-6 T 22-04-2016 IPR000644 CBS domain RPIC_RS02285 e387fdba30f63a55e8fcc46b90569703 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 292 423 8.0E-38 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 SUPERFAMILY SSF53850 33 515 1.48E-125 T 22-04-2016 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 Gene3D G3DSA:3.40.190.10 196 311 3.8E-41 T 22-04-2016 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 PANTHER PTHR30290 2 286 2.0E-115 T 22-04-2016 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 PANTHER PTHR30290 303 515 2.0E-115 T 22-04-2016 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 PIRSF PIRSF002741 6 522 5.3E-99 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 436 3.7E-95 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 Gene3D G3DSA:3.90.76.10 46 195 9.1E-34 T 22-04-2016 RPIC_RS10620 4dbf9f7d69954f66558664841917925e 532 Gene3D G3DSA:3.10.105.10 312 503 7.0E-49 T 22-04-2016 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PIRSF PIRSF009393 1 759 6.5E-288 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 Gene3D G3DSA:3.40.640.10 152 457 3.6E-112 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 146 3.0E-39 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 620 745 7.7E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 Gene3D G3DSA:3.90.1150.10 460 636 3.5E-70 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PANTHER PTHR11751 153 504 2.4E-140 T 22-04-2016 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PANTHER PTHR11751 532 540 2.4E-140 T 22-04-2016 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PANTHER PTHR11751 557 680 2.4E-140 T 22-04-2016 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 393 407 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 Gene3D G3DSA:3.90.100.10 637 758 1.4E-34 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 SUPERFAMILY SSF53383 152 612 4.48E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 SUPERFAMILY SSF55904 615 758 1.06E-44 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 152 593 6.3E-153 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PANTHER PTHR11751:SF406 153 504 2.4E-140 T 22-04-2016 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PANTHER PTHR11751:SF406 532 540 2.4E-140 T 22-04-2016 RPIC_RS12695 e9a5cdde5cb9b61dfddeff5e2f0e9f09 759 PANTHER PTHR11751:SF406 557 680 2.4E-140 T 22-04-2016 RPIC_RS15490 b59aa3c9605fa1b4ffe0c91c8bd779c1 157 SUPERFAMILY SSF53955 31 151 2.06E-36 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS15490 b59aa3c9605fa1b4ffe0c91c8bd779c1 157 Gene3D G3DSA:1.10.530.10 33 133 3.0E-17 T 22-04-2016 RPIC_RS15490 b59aa3c9605fa1b4ffe0c91c8bd779c1 157 Pfam PF01464 Transglycosylase SLT domain 34 138 1.1E-14 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 PANTHER PTHR30537 1 297 9.0E-132 T 22-04-2016 RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 Gene3D G3DSA:1.10.10.10 1 82 5.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 PANTHER PTHR30537:SF21 1 297 9.0E-132 T 22-04-2016 RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 Gene3D G3DSA:3.40.190.10 93 178 3.1E-22 T 22-04-2016 RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 SUPERFAMILY SSF46785 2 112 7.42E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 SUPERFAMILY SSF53850 91 301 9.41E-40 T 22-04-2016 RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 Pfam PF03466 LysR substrate binding domain 88 297 1.5E-39 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS00320 9f15a3bc3e3f439cff13f5f96faacf40 304 Gene3D G3DSA:3.40.190.10 179 263 8.7E-4 T 22-04-2016 RPIC_RS11020 8ef161cfff49a2f07a0e722d3bf32e96 192 PANTHER PTHR23004 6 192 1.7E-64 T 22-04-2016 RPIC_RS11020 8ef161cfff49a2f07a0e722d3bf32e96 192 PANTHER PTHR23004:SF7 6 192 1.7E-64 T 22-04-2016 RPIC_RS11020 8ef161cfff49a2f07a0e722d3bf32e96 192 Pfam PF06041 Bacterial protein of unknown function (DUF924) 10 189 2.2E-60 T 22-04-2016 IPR010323 Protein of unknown function DUF924 RPIC_RS11020 8ef161cfff49a2f07a0e722d3bf32e96 192 SUPERFAMILY SSF48452 4 188 7.59E-62 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS11020 8ef161cfff49a2f07a0e722d3bf32e96 192 Gene3D G3DSA:1.25.40.10 88 192 1.7E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS11020 8ef161cfff49a2f07a0e722d3bf32e96 192 Gene3D G3DSA:1.20.58.320 4 86 1.3E-30 T 22-04-2016 RPIC_RS04275 bc7050c5e464fc7bd61f86f310daa963 195 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 1 195 47.651 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 RPIC_RS04275 bc7050c5e464fc7bd61f86f310daa963 195 Pfam PF00881 Nitroreductase family 17 173 5.0E-15 T 22-04-2016 IPR029479 Nitroreductase RPIC_RS04275 bc7050c5e464fc7bd61f86f310daa963 195 PANTHER PTHR23026 1 191 5.9E-80 T 22-04-2016 RPIC_RS04275 bc7050c5e464fc7bd61f86f310daa963 195 PANTHER PTHR23026:SF110 1 191 5.9E-80 T 22-04-2016 RPIC_RS04275 bc7050c5e464fc7bd61f86f310daa963 195 Gene3D G3DSA:3.40.109.10 2 193 2.5E-45 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC_RS04275 bc7050c5e464fc7bd61f86f310daa963 195 SUPERFAMILY SSF55469 9 194 1.31E-46 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 Gene3D G3DSA:3.40.50.300 16 241 8.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 Pfam PF00005 ABC transporter 38 179 5.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 SUPERFAMILY SSF52540 13 240 6.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 PANTHER PTHR24220 23 260 1.1E-98 T 22-04-2016 RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 SMART SM00382 46 225 5.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS00265 32c0408df76faa01529b041ad708b883 326 PANTHER PTHR24220:SF0 23 260 1.1E-98 T 22-04-2016 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 Pfam PF13193 AMP-binding enzyme C-terminal domain 434 509 5.2E-23 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 SUPERFAMILY SSF56801 18 520 9.42E-152 T 22-04-2016 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 Pfam PF00501 AMP-binding enzyme 25 425 5.1E-99 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 Gene3D G3DSA:3.30.300.30 420 517 2.4E-31 T 22-04-2016 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 Gene3D G3DSA:3.40.50.980 185 342 1.1E-41 T 22-04-2016 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 Gene3D G3DSA:2.30.38.10 346 415 9.9E-22 T 22-04-2016 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 Gene3D G3DSA:3.40.50.980 19 184 1.4E-42 T 22-04-2016 RPIC_RS00520 31c056c6d2d6d864cf282b7b48626aae 528 PANTHER PTHR24096 16 516 2.7E-159 T 22-04-2016 RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 PIRSF PIRSF006429 12 530 1.5E-161 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 PANTHER PTHR11938:SF50 155 509 1.8E-89 T 22-04-2016 RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 Pfam PF01645 Conserved region in glutamate synthase 153 470 3.3E-84 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 PANTHER PTHR11938 155 509 1.8E-89 T 22-04-2016 RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 SUPERFAMILY SSF51395 29 488 5.76E-131 T 22-04-2016 RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 PIRSF PIRSF500060 9 527 2.1E-238 T 22-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria RPIC_RS14605 be8fd0a3c01b80124a65bafabf1dfb46 532 Gene3D G3DSA:3.20.20.70 47 490 5.7E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS14780 3004b34572028f5d0f6e8456ef78d25b 139 PANTHER PTHR34109 12 133 6.1E-21 T 22-04-2016 RPIC_RS14780 3004b34572028f5d0f6e8456ef78d25b 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 130 5.9E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS14780 3004b34572028f5d0f6e8456ef78d25b 139 SUPERFAMILY SSF54593 10 135 8.19E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS14780 3004b34572028f5d0f6e8456ef78d25b 139 Gene3D G3DSA:3.10.180.10 14 135 1.3E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 343 8.0E-130 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 SUPERFAMILY SSF51395 6 342 1.5E-101 T 22-04-2016 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 Gene3D G3DSA:3.20.20.70 4 343 1.5E-126 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 Pfam PF01180 Dihydroorotate dehydrogenase 51 342 2.4E-85 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 PIRSF PIRSF000164 19 344 2.9E-93 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 342 51.347 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 RPIC_RS09460 ec3cd0d37af0cf7d247512f8969e0064 344 PANTHER PTHR11938 9 337 2.2E-81 T 22-04-2016 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 ProSitePatterns PS00622 LuxR-type HTH domain signature. 205 232 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 SUPERFAMILY SSF46894 179 251 4.76E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 PANTHER PTHR26402 191 252 2.6E-14 T 22-04-2016 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 Pfam PF03472 Autoinducer binding domain 17 175 1.2E-25 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 SUPERFAMILY SSF75516 9 179 3.53E-32 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 SMART SM00421 188 245 2.0E-24 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 Pfam PF00196 Bacterial regulatory proteins, luxR family 190 244 3.1E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 Gene3D G3DSA:1.10.10.10 194 251 4.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 205 1.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 221 233 1.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 221 1.6E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 Gene3D G3DSA:3.30.450.80 9 193 1.6E-33 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain RPIC_RS02250 95d458aee2d73de17e90561f77954dc2 253 PANTHER PTHR26402:SF102 191 252 2.6E-14 T 22-04-2016 RPIC_RS07140 0f9c3fc48cb586b455acf74af759eafa 144 SUPERFAMILY SSF54637 4 128 9.15E-31 T 22-04-2016 IPR029069 HotDog domain RPIC_RS07140 0f9c3fc48cb586b455acf74af759eafa 144 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 14 125 1.5E-22 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain RPIC_RS07140 0f9c3fc48cb586b455acf74af759eafa 144 PANTHER PTHR12418:SF27 13 142 5.2E-24 T 22-04-2016 RPIC_RS07140 0f9c3fc48cb586b455acf74af759eafa 144 Gene3D G3DSA:3.10.129.10 12 138 1.2E-36 T 22-04-2016 IPR029069 HotDog domain RPIC_RS07140 0f9c3fc48cb586b455acf74af759eafa 144 Pfam PF03061 Thioesterase superfamily 47 120 3.4E-14 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS07140 0f9c3fc48cb586b455acf74af759eafa 144 PANTHER PTHR12418 13 142 5.2E-24 T 22-04-2016 RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 PANTHER PTHR24220 10 232 9.3E-96 T 22-04-2016 RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 Gene3D G3DSA:3.40.50.300 8 229 5.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 SUPERFAMILY SSF52540 9 229 3.34E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 Pfam PF00005 ABC transporter 28 177 1.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 SMART SM00382 37 225 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS08170 58ba7d2a6f9fdeacd91eff191069b7d0 234 PANTHER PTHR24220:SF86 10 232 9.3E-96 T 22-04-2016 RPIC_RS05370 5502b715280444cd4c1dc7182413bd82 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 61 304 1.4E-11 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC_RS05370 5502b715280444cd4c1dc7182413bd82 331 PANTHER PTHR13833 47 238 1.2E-16 T 22-04-2016 RPIC_RS05370 5502b715280444cd4c1dc7182413bd82 331 PANTHER PTHR13833 282 323 1.2E-16 T 22-04-2016 RPIC_RS05370 5502b715280444cd4c1dc7182413bd82 331 Gene3D G3DSA:2.130.10.10 25 324 1.4E-52 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS05370 5502b715280444cd4c1dc7182413bd82 331 SUPERFAMILY SSF50974 12 324 1.18E-71 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal RPIC_RS10315 6c8802ce550c06b7b3f6b97f7c8a53b9 267 Pfam PF14023 Protein of unknown function (DUF4239) 52 247 4.7E-19 T 22-04-2016 IPR025333 Protein of unknown function DUF4239 RPIC_RS08565 d371e9843a14197d8890d77e1ad46038 187 PANTHER PTHR30221:SF8 8 186 8.5E-41 T 22-04-2016 RPIC_RS08565 d371e9843a14197d8890d77e1ad46038 187 SUPERFAMILY SSF50182 112 186 3.17E-8 T 22-04-2016 IPR010920 LSM domain RPIC_RS08565 d371e9843a14197d8890d77e1ad46038 187 PANTHER PTHR30221 8 186 8.5E-41 T 22-04-2016 RPIC_RS08565 d371e9843a14197d8890d77e1ad46038 187 Gene3D G3DSA:2.30.30.60 128 182 2.0E-7 T 22-04-2016 RPIC_RS08565 d371e9843a14197d8890d77e1ad46038 187 Pfam PF00924 Mechanosensitive ion channel 67 179 2.2E-10 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 658 5.5E-298 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 625 1.3E-27 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 PANTHER PTHR24095 14 658 1.1E-269 T 22-04-2016 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 SUPERFAMILY SSF56801 15 655 2.49E-175 T 22-04-2016 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Gene3D G3DSA:3.40.50.980 273 435 3.2E-29 T 22-04-2016 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Gene3D G3DSA:2.30.38.10 450 529 5.0E-8 T 22-04-2016 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Gene3D G3DSA:3.40.50.980 85 272 4.5E-41 T 22-04-2016 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 660 51.585 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 ProSitePatterns PS00455 Putative AMP-binding domain signature. 267 278 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Pfam PF00501 AMP-binding enzyme 95 535 1.4E-94 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 2.1E-21 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 RPIC_RS10325 38168049be4bd885cbe65fff6f83f0db 660 Gene3D G3DSA:3.30.300.30 530 639 5.5E-27 T 22-04-2016 RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 83 2.4E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 SUPERFAMILY SSF52833 1 85 2.1E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 Gene3D G3DSA:3.40.30.10 2 90 8.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 SUPERFAMILY SSF47616 83 208 1.5E-39 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 Gene3D G3DSA:1.20.1050.10 91 201 2.1E-50 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 PANTHER PTHR11260:SF157 1 202 4.4E-65 T 22-04-2016 RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 PANTHER PTHR11260 1 202 4.4E-65 T 22-04-2016 RPIC_RS00375 a458425c986500efa2588a50efb5f930 235 Pfam PF00043 Glutathione S-transferase, C-terminal domain 111 197 1.2E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS08375 823fe9d066366219502e19cfc7d9baf2 97 SUPERFAMILY SSF55008 2 68 7.85E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08375 823fe9d066366219502e19cfc7d9baf2 97 Gene3D G3DSA:3.30.70.100 3 66 1.0E-21 T 22-04-2016 RPIC_RS08375 823fe9d066366219502e19cfc7d9baf2 97 Pfam PF00403 Heavy-metal-associated domain 6 64 1.0E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS08375 823fe9d066366219502e19cfc7d9baf2 97 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00412 Epoxide hydrolase signature 313 335 5.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00412 Epoxide hydrolase signature 143 156 5.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00412 Epoxide hydrolase signature 157 170 5.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00412 Epoxide hydrolase signature 98 113 5.2E-6 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 Gene3D G3DSA:3.40.50.1820 36 336 1.4E-76 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 SUPERFAMILY SSF53474 37 337 6.06E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 Pfam PF12697 Alpha/beta hydrolase family 75 328 3.0E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PANTHER PTHR10992 301 338 1.1E-78 T 22-04-2016 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PANTHER PTHR10992 1 284 1.1E-78 T 22-04-2016 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PANTHER PTHR10992:SF771 301 338 1.1E-78 T 22-04-2016 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PANTHER PTHR10992:SF771 1 284 1.1E-78 T 22-04-2016 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 113 6.0E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00111 Alpha/beta hydrolase fold signature 157 170 6.0E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS06305 c50ebdb7a1be9b472f9f3339aef41c7b 348 PRINTS PR00111 Alpha/beta hydrolase fold signature 143 156 6.0E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS15890 953ac71ad9cb9bbc75dcddc0477647d8 85 Pfam PF02416 mttA/Hcf106 family 5 54 1.0E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RPIC_RS15890 953ac71ad9cb9bbc75dcddc0477647d8 85 PANTHER PTHR33162 1 49 3.8E-15 T 22-04-2016 RPIC_RS15890 953ac71ad9cb9bbc75dcddc0477647d8 85 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 4.9E-23 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RPIC_RS15890 953ac71ad9cb9bbc75dcddc0477647d8 85 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 84 24.071 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RPIC_RS10555 62f3a7f1c29b03feff91411d312fb5a8 95 SUPERFAMILY SSF109910 11 89 6.02E-20 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RPIC_RS10555 62f3a7f1c29b03feff91411d312fb5a8 95 Gene3D G3DSA:1.10.150.250 12 92 1.3E-23 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RPIC_RS10555 62f3a7f1c29b03feff91411d312fb5a8 95 Pfam PF03937 Flavinator of succinate dehydrogenase 18 78 4.1E-21 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase RPIC_RS02280 047b1afaa728badeaaae8490013f00fa 576 Pfam PF00474 Sodium:solute symporter family 68 493 3.5E-113 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS02280 047b1afaa728badeaaae8490013f00fa 576 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 183 208 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 RPIC_RS02280 047b1afaa728badeaaae8490013f00fa 576 PANTHER PTHR11819 37 565 2.7E-249 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS02280 047b1afaa728badeaaae8490013f00fa 576 PANTHER PTHR11819:SF13 37 565 2.7E-249 T 22-04-2016 RPIC_RS02280 047b1afaa728badeaaae8490013f00fa 576 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 68 493 3.4E-62 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS10065 6eccfa354ef249d0b0977845706279c1 250 Pfam PF11655 Protein of unknown function (DUF2589) 79 220 5.3E-21 T 22-04-2016 IPR024510 Protein of unknown function DUF2589 RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 Gene3D G3DSA:3.40.50.300 2 222 1.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 Pfam PF00005 ABC transporter 20 159 9.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 PANTHER PTHR24220:SF568 6 222 8.1E-88 T 22-04-2016 RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 PANTHER PTHR24220 6 222 8.1E-88 T 22-04-2016 RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 SUPERFAMILY SSF52540 4 223 2.71E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS12080 d410224e1827ad68a5002f462d7e51d9 233 SMART SM00382 29 209 9.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 PANTHER PTHR10072 19 124 2.5E-47 T 22-04-2016 RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 SUPERFAMILY SSF89360 17 110 6.15E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 119 4.2E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 105 122 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 124 36.967 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 Gene3D G3DSA:2.60.300.12 16 110 7.2E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis RPIC_RS01815 09a08aca549508c8a443452c657ec8a2 124 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 21 124 1.4E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 Gene3D G3DSA:3.30.420.40 208 322 3.8E-14 T 22-04-2016 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 PANTHER PTHR32432:SF3 1 361 1.2E-34 T 22-04-2016 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 13 360 7.2E-65 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 Pfam PF11104 Type IV pilus assembly protein PilM; 16 359 3.9E-118 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 PIRSF PIRSF019169 3 361 1.1E-90 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 SUPERFAMILY SSF53067 202 359 1.5E-15 T 22-04-2016 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 SMART SM00842 14 176 3.7E-4 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 PANTHER PTHR32432 1 361 1.2E-34 T 22-04-2016 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 Gene3D G3DSA:3.30.420.40 14 106 8.9E-8 T 22-04-2016 RPIC_RS16060 6514a405fab28a0fe620f6dfc28ef9e7 361 SUPERFAMILY SSF53067 14 178 2.79E-11 T 22-04-2016 RPIC_RS16820 6837dd7dfc2348d95e1b52738e260eb5 189 Gene3D G3DSA:3.30.1360.100 108 184 1.0E-18 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RPIC_RS16820 6837dd7dfc2348d95e1b52738e260eb5 189 SUPERFAMILY SSF103054 108 183 4.71E-18 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain RPIC_RS16820 6837dd7dfc2348d95e1b52738e260eb5 189 Pfam PF04612 Type II secretion system (T2SS), protein M 27 183 1.6E-47 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 PANTHER PTHR30035 8 241 1.4E-64 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 PRINTS PR01805 VacJ lipoprotein signature 105 122 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 PRINTS PR01805 VacJ lipoprotein signature 54 70 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 PRINTS PR01805 VacJ lipoprotein signature 37 50 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 PRINTS PR01805 VacJ lipoprotein signature 141 158 8.3E-26 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 Pfam PF04333 MlaA lipoprotein 36 228 2.1E-79 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 RPIC_RS15980 b36e1cca67d0c6c5cf9ad113bda07f40 267 PANTHER PTHR30035:SF3 8 241 1.4E-64 T 22-04-2016 RPIC_RS13870 2244d2e03fdf8057ee1bb052b1cc110c 192 PANTHER PTHR33540:SF2 19 153 1.4E-34 T 22-04-2016 RPIC_RS13870 2244d2e03fdf8057ee1bb052b1cc110c 192 SUPERFAMILY SSF52540 49 152 2.51E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13870 2244d2e03fdf8057ee1bb052b1cc110c 192 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 26 151 1.9E-36 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RPIC_RS13870 2244d2e03fdf8057ee1bb052b1cc110c 192 PANTHER PTHR33540 19 153 1.4E-34 T 22-04-2016 RPIC_RS13870 2244d2e03fdf8057ee1bb052b1cc110c 192 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 25 151 1.2E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RPIC_RS13870 2244d2e03fdf8057ee1bb052b1cc110c 192 Gene3D G3DSA:3.40.50.300 20 186 2.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 Gene3D G3DSA:3.30.1360.40 4 76 1.0E-12 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 Pfam PF02682 Allophanate hydrolase subunit 1 4 200 3.4E-72 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 PANTHER PTHR34698 1 210 1.0E-87 T 22-04-2016 RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 SUPERFAMILY SSF160467 4 88 8.24E-10 T 22-04-2016 RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 SMART SM00796 3 200 9.0E-104 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 8 209 5.7E-79 T 22-04-2016 IPR010016 KipI family RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 Gene3D G3DSA:2.40.100.10 86 210 1.6E-51 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 SUPERFAMILY SSF50891 86 210 8.72E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain RPIC_RS11695 dd23472a0ef56365ffe76a9c67ef8beb 215 PANTHER PTHR34698:SF2 1 210 1.0E-87 T 22-04-2016 RPIC_RS16560 c68c38cd18e117eec7ad39775a07b195 314 Pfam PF01381 Helix-turn-helix 44 95 2.3E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS16560 c68c38cd18e117eec7ad39775a07b195 314 SUPERFAMILY SSF47413 38 95 1.9E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS16560 c68c38cd18e117eec7ad39775a07b195 314 SMART SM00530 42 97 1.2E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RPIC_RS16560 c68c38cd18e117eec7ad39775a07b195 314 PANTHER PTHR10245:SF17 10 314 2.7E-30 T 22-04-2016 RPIC_RS16560 c68c38cd18e117eec7ad39775a07b195 314 PANTHER PTHR10245 10 314 2.7E-30 T 22-04-2016 RPIC_RS16560 c68c38cd18e117eec7ad39775a07b195 314 Gene3D G3DSA:1.10.260.40 40 95 3.8E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS20090 39c404378fd33334e5fb7e7cfbb389f8 140 SUPERFAMILY SSF56801 24 139 1.7E-11 T 22-04-2016 RPIC_RS20090 39c404378fd33334e5fb7e7cfbb389f8 140 Gene3D G3DSA:3.40.50.980 73 138 6.6E-4 T 22-04-2016 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 Gene3D G3DSA:1.10.10.60 226 281 4.3E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 Gene3D G3DSA:1.10.10.60 282 330 2.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 281 323 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 SUPERFAMILY SSF46689 228 277 3.54E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 SMART SM00342 244 327 5.2E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 SUPERFAMILY SSF46689 280 330 3.94E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 PANTHER PTHR11019:SF68 102 335 3.7E-25 T 22-04-2016 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 PANTHER PTHR11019 102 335 3.7E-25 T 22-04-2016 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 SUPERFAMILY SSF52317 1 203 1.83E-16 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 Pfam PF12833 Helix-turn-helix domain 250 328 1.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS13910 5a8d7faf5d93e1bdbfe1d609ac42fc47 338 Gene3D G3DSA:3.40.50.880 4 200 1.9E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 Pfam PF07650 KH domain 38 110 3.6E-21 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 Gene3D G3DSA:3.30.1140.32 108 206 1.2E-45 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 SUPERFAMILY SSF54821 108 206 1.83E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.561 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 PANTHER PTHR11760:SF19 2 236 1.9E-127 T 22-04-2016 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 Gene3D G3DSA:3.30.300.20 17 107 1.8E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 PANTHER PTHR11760 2 236 1.9E-127 T 22-04-2016 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 SMART SM00322 60 125 7.3E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.7E-92 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 SUPERFAMILY SSF54814 2 106 1.83E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 RPIC_RS16250 a9b9dfcda8a020802a25244f8505f0bf 262 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.2E-40 T 22-04-2016 RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 264 6.1E-76 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 Gene3D G3DSA:2.120.10.30 3 297 9.2E-89 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PANTHER PTHR10907 11 297 1.1E-77 T 22-04-2016 RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 SMART SM00135 138 180 0.0013 T 22-04-2016 IPR000033 LDLR class B repeat RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PANTHER PTHR10907:SF47 11 297 1.1E-77 T 22-04-2016 RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 1.38E-32 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 134 156 1.38E-32 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 203 220 1.38E-32 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 157 177 1.38E-32 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 245 263 1.38E-32 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 92 113 1.38E-32 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) RPIC_RS14745 350f8178f38bcd23c764ea58e679fde7 304 SUPERFAMILY SSF63829 9 296 1.8E-64 T 22-04-2016 RPIC_RS08715 505f1526dc4ef58a9d37a238a54f3b8c 128 SUPERFAMILY SSF81296 25 128 1.96E-30 T 22-04-2016 IPR014756 Immunoglobulin E-set RPIC_RS08715 505f1526dc4ef58a9d37a238a54f3b8c 128 Pfam PF04234 CopC domain 26 127 2.7E-23 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 RPIC_RS08715 505f1526dc4ef58a9d37a238a54f3b8c 128 Gene3D G3DSA:2.60.40.1220 25 128 6.3E-30 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like RPIC_RS06255 e7d5b861f8077b4a0b571adfdfaeb5ac 263 Pfam PF09948 Predicted metal-binding integral membrane protein (DUF2182) 69 259 6.8E-68 T 22-04-2016 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding RPIC_RS00120 47765c7fe50f5a39f64da6302bfe7166 157 Pfam PF02627 Carboxymuconolactone decarboxylase family 15 96 1.3E-16 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS00120 47765c7fe50f5a39f64da6302bfe7166 157 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 34 80 4.0E-15 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS00120 47765c7fe50f5a39f64da6302bfe7166 157 PANTHER PTHR34846 14 130 8.7E-13 T 22-04-2016 RPIC_RS00120 47765c7fe50f5a39f64da6302bfe7166 157 SUPERFAMILY SSF69118 6 147 6.42E-42 T 22-04-2016 IPR029032 AhpD-like RPIC_RS00120 47765c7fe50f5a39f64da6302bfe7166 157 Gene3D G3DSA:1.20.1290.10 5 148 7.9E-49 T 22-04-2016 IPR029032 AhpD-like RPIC_RS00120 47765c7fe50f5a39f64da6302bfe7166 157 PANTHER PTHR34846:SF2 14 130 8.7E-13 T 22-04-2016 RPIC_RS06515 78fc4d9d4ec5250b924195e5b8893560 406 Gene3D G3DSA:1.10.10.10 335 372 1.4E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06515 78fc4d9d4ec5250b924195e5b8893560 406 SUPERFAMILY SSF46785 329 385 5.18E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 Gene3D G3DSA:3.40.50.720 8 189 3.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 Gene3D G3DSA:3.40.50.720 221 245 3.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 PANTHER PTHR10491 1 305 2.4E-100 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 8 296 4.2E-97 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 PANTHER PTHR10491:SF4 1 305 2.4E-100 T 22-04-2016 RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 SUPERFAMILY SSF51735 8 296 3.7E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS03105 ceb1475c82785d505d61782fb36b5c88 306 Pfam PF04321 RmlD substrate binding domain 8 297 2.9E-105 T 22-04-2016 IPR029903 RmlD-like substrate binding domain RPIC_RS18410 668d592874320d60297c0209c537148f 192 Pfam PF00072 Response regulator receiver domain 8 127 4.8E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18410 668d592874320d60297c0209c537148f 192 Gene3D G3DSA:1.10.10.60 139 190 1.3E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS18410 668d592874320d60297c0209c537148f 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 154 171 3.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS18410 668d592874320d60297c0209c537148f 192 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 171 191 3.0E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS18410 668d592874320d60297c0209c537148f 192 SMART SM00448 5 127 8.8E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS18410 668d592874320d60297c0209c537148f 192 PANTHER PTHR26402 5 128 2.1E-32 T 22-04-2016 RPIC_RS18410 668d592874320d60297c0209c537148f 192 PANTHER PTHR26402:SF344 5 128 2.1E-32 T 22-04-2016 RPIC_RS18410 668d592874320d60297c0209c537148f 192 Gene3D G3DSA:3.40.50.2300 8 135 1.7E-25 T 22-04-2016 RPIC_RS18410 668d592874320d60297c0209c537148f 192 SUPERFAMILY SSF52172 7 176 6.04E-24 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS18410 668d592874320d60297c0209c537148f 192 Pfam PF02954 Bacterial regulatory protein, Fis family 148 187 9.9E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 RPIC_RS14705 90c406fa1e70a041ec6157f5318a5bfe 143 Pfam PF01475 Ferric uptake regulator family 10 129 2.1E-45 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RPIC_RS14705 90c406fa1e70a041ec6157f5318a5bfe 143 Gene3D G3DSA:1.10.10.10 6 82 2.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14705 90c406fa1e70a041ec6157f5318a5bfe 143 SUPERFAMILY SSF46785 6 133 4.82E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14705 90c406fa1e70a041ec6157f5318a5bfe 143 PANTHER PTHR33202 5 134 3.1E-39 T 22-04-2016 RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 Gene3D G3DSA:3.40.190.10 197 261 2.3E-8 T 22-04-2016 RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 Gene3D G3DSA:1.10.10.10 1 80 4.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 Pfam PF03466 LysR substrate binding domain 89 292 1.5E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 SUPERFAMILY SSF53850 90 295 6.27E-30 T 22-04-2016 RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.6E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 Gene3D G3DSA:3.40.190.10 81 196 7.6E-22 T 22-04-2016 RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 SUPERFAMILY SSF46785 1 110 4.79E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13595 d9af4ce5afcafa2a69aa386490674e06 321 PANTHER PTHR30427 1 312 9.6E-62 T 22-04-2016 RPIC_RS02955 7dfd43c46670114a92fb438f89da33b4 208 Gene3D G3DSA:1.20.1440.20 29 208 1.2E-64 T 22-04-2016 IPR023353 LemA-like domain RPIC_RS02955 7dfd43c46670114a92fb438f89da33b4 208 Pfam PF04011 LemA family 23 208 8.0E-68 T 22-04-2016 IPR007156 LemA RPIC_RS02955 7dfd43c46670114a92fb438f89da33b4 208 PANTHER PTHR34478 11 208 1.0E-88 T 22-04-2016 RPIC_RS02955 7dfd43c46670114a92fb438f89da33b4 208 PANTHER PTHR34478:SF2 11 208 1.0E-88 T 22-04-2016 RPIC_RS02955 7dfd43c46670114a92fb438f89da33b4 208 SUPERFAMILY SSF140478 38 195 4.18E-56 T 22-04-2016 IPR023353 LemA-like domain RPIC_RS17530 82da90b9f480f94e2365e63bbbb4b594 294 PANTHER PTHR11795 1 293 1.7E-113 T 22-04-2016 RPIC_RS17530 82da90b9f480f94e2365e63bbbb4b594 294 PANTHER PTHR11795:SF379 1 293 1.7E-113 T 22-04-2016 RPIC_RS17530 82da90b9f480f94e2365e63bbbb4b594 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 9.5E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS07010 769d051923a44e196fa0c8a6e10e66aa 265 Gene3D G3DSA:1.10.3720.10 11 254 9.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07010 769d051923a44e196fa0c8a6e10e66aa 265 SUPERFAMILY SSF161098 2 253 3.36E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07010 769d051923a44e196fa0c8a6e10e66aa 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 250 1.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07010 769d051923a44e196fa0c8a6e10e66aa 265 PANTHER PTHR30193:SF20 1 265 6.5E-39 T 22-04-2016 RPIC_RS07010 769d051923a44e196fa0c8a6e10e66aa 265 PANTHER PTHR30193 1 265 6.5E-39 T 22-04-2016 RPIC_RS15145 633eb1808a2b6dce284cf7c0c5556774 204 Pfam PF01121 Dephospho-CoA kinase 3 188 2.8E-57 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RPIC_RS15145 633eb1808a2b6dce284cf7c0c5556774 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 195 1.8E-49 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RPIC_RS15145 633eb1808a2b6dce284cf7c0c5556774 204 SUPERFAMILY SSF52540 1 197 2.81E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15145 633eb1808a2b6dce284cf7c0c5556774 204 Gene3D G3DSA:3.40.50.300 1 197 1.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15145 633eb1808a2b6dce284cf7c0c5556774 204 PANTHER PTHR10695 1 204 4.3E-65 T 22-04-2016 RPIC_RS15145 633eb1808a2b6dce284cf7c0c5556774 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 204 27.75 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 9 186 2.1E-75 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 SUPERFAMILY SSF69118 7 193 4.71E-59 T 22-04-2016 IPR029032 AhpD-like RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 Gene3D G3DSA:1.20.1290.10 68 188 4.4E-38 T 22-04-2016 IPR029032 AhpD-like RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 PANTHER PTHR35446:SF2 2 199 3.1E-97 T 22-04-2016 RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 PANTHER PTHR35446 2 199 3.1E-97 T 22-04-2016 RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 Gene3D G3DSA:1.20.5.810 16 66 3.8E-30 T 22-04-2016 RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 134 3.2E-13 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS11805 2cee8856a01a538496ccca5c9cea2aef 199 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 67 114 4.8E-12 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Pfam PF08238 Sel1 repeat 153 186 1.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Pfam PF08238 Sel1 repeat 116 152 4.4E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Pfam PF08238 Sel1 repeat 101 114 85.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Pfam PF08238 Sel1 repeat 228 246 17.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Pfam PF08238 Sel1 repeat 189 222 4.3E-6 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 PANTHER PTHR11102 68 246 7.7E-37 T 22-04-2016 RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 SUPERFAMILY SSF81901 110 250 2.53E-29 T 22-04-2016 RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Gene3D G3DSA:1.25.40.10 186 259 3.3E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 Gene3D G3DSA:1.25.40.10 67 185 5.8E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 SMART SM00671 153 188 1.5E-6 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 SMART SM00671 116 152 8.0E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS17645 bda27378b507f3f93e56c7501e58b592 267 SMART SM00671 189 224 5.7E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18080 378ca719cba9521105c597c8bb345c50 159 PANTHER PTHR34109 6 145 1.8E-44 T 22-04-2016 RPIC_RS18080 378ca719cba9521105c597c8bb345c50 159 Gene3D G3DSA:3.10.180.10 21 144 7.0E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS18080 378ca719cba9521105c597c8bb345c50 159 PANTHER PTHR34109:SF1 6 145 1.8E-44 T 22-04-2016 RPIC_RS18080 378ca719cba9521105c597c8bb345c50 159 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 20 129 6.7E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS18080 378ca719cba9521105c597c8bb345c50 159 SUPERFAMILY SSF54593 12 152 1.75E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 169 2.2E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 Pfam PF00593 TonB dependent receptor 509 757 1.2E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 PANTHER PTHR32552 22 759 5.2E-217 T 22-04-2016 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 SUPERFAMILY SSF56935 32 759 1.96E-121 T 22-04-2016 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 Gene3D G3DSA:2.170.130.10 39 178 2.6E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 Gene3D G3DSA:2.40.170.20 183 759 3.1E-148 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 PANTHER PTHR32552:SF8 22 759 5.2E-217 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 RPIC_RS00480 d62051f8f159d2dd3dded5bb69c16a33 759 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 756 4.3E-78 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 SUPERFAMILY SSF53756 13 364 8.38E-122 T 22-04-2016 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 12 359 6.7E-102 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 PANTHER PTHR21015:SF22 5 366 6.0E-112 T 22-04-2016 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 14 364 36.539 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 Gene3D G3DSA:3.40.50.2000 262 346 3.6E-7 T 22-04-2016 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 Gene3D G3DSA:3.40.50.2000 12 202 4.4E-65 T 22-04-2016 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 PANTHER PTHR21015 5 366 6.0E-112 T 22-04-2016 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 191 355 7.3E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15225 882acd9df9488d7bfbb6d873f789d970 366 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 15 151 3.8E-35 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS04200 19c337b97ee926e41dbf3fdb4f032037 327 Pfam PF12706 Beta-lactamase superfamily domain 64 292 1.9E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04200 19c337b97ee926e41dbf3fdb4f032037 327 SMART SM00849 52 239 4.5E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04200 19c337b97ee926e41dbf3fdb4f032037 327 Gene3D G3DSA:3.60.15.10 35 327 1.5E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04200 19c337b97ee926e41dbf3fdb4f032037 327 PANTHER PTHR12553 35 235 1.8E-39 T 22-04-2016 RPIC_RS04200 19c337b97ee926e41dbf3fdb4f032037 327 PANTHER PTHR12553 262 327 1.8E-39 T 22-04-2016 RPIC_RS04200 19c337b97ee926e41dbf3fdb4f032037 327 SUPERFAMILY SSF56281 36 327 2.62E-49 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 Gene3D G3DSA:3.40.720.10 10 464 3.9E-150 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 Pfam PF00245 Alkaline phosphatase 30 463 7.4E-107 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 PANTHER PTHR11596 30 464 4.5E-159 T 22-04-2016 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 PRINTS PR00113 Alkaline phosphatase signature 30 50 1.3E-42 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 PRINTS PR00113 Alkaline phosphatase signature 140 160 1.3E-42 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 PRINTS PR00113 Alkaline phosphatase signature 275 304 1.3E-42 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 PRINTS PR00113 Alkaline phosphatase signature 194 204 1.3E-42 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 SMART SM00098 31 463 3.1E-109 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18115 600b4666ffce8c7cea467dc5b846430a 464 SUPERFAMILY SSF53649 11 464 7.72E-132 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS17630 073027d2296f0b2ebbe25dfdd2654d36 315 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 175 293 5.8E-21 T 22-04-2016 IPR019262 Domain of unknown function DUF2272 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 PANTHER PTHR10909 31 466 3.0E-170 T 22-04-2016 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 Gene3D G3DSA:1.20.140.10 283 452 1.4E-39 T 22-04-2016 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 291 446 1.3E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 SUPERFAMILY SSF47203 296 452 4.19E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 SUPERFAMILY SSF56645 54 298 1.37E-32 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 PANTHER PTHR10909:SF289 31 466 3.0E-170 T 22-04-2016 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 Gene3D G3DSA:2.40.110.10 180 282 6.6E-19 T 22-04-2016 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 280 5.4E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 RPIC_RS18040 959e06bd3ec8ef690ce56e7fa221f157 553 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 405 424 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 RPIC_RS00890 340ba911fa2dbeaa2500d6caf02b1c15 215 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 23 128 4.0E-8 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RPIC_RS00890 340ba911fa2dbeaa2500d6caf02b1c15 215 SUPERFAMILY SSF53474 2 208 2.95E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00890 340ba911fa2dbeaa2500d6caf02b1c15 215 Gene3D G3DSA:3.40.50.1820 10 209 4.4E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00890 340ba911fa2dbeaa2500d6caf02b1c15 215 PANTHER PTHR12277 1 207 1.5E-34 T 22-04-2016 RPIC_RS00890 340ba911fa2dbeaa2500d6caf02b1c15 215 PANTHER PTHR12277:SF79 1 207 1.5E-34 T 22-04-2016 RPIC_RS13085 28719aae7019f414d9c9990dba48fbc5 191 SUPERFAMILY SSF52540 5 183 5.32E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13085 28719aae7019f414d9c9990dba48fbc5 191 PIRSF PIRSF006135 4 185 3.4E-55 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RPIC_RS13085 28719aae7019f414d9c9990dba48fbc5 191 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 6 181 1.4E-61 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 RPIC_RS13085 28719aae7019f414d9c9990dba48fbc5 191 Gene3D G3DSA:3.40.50.300 5 183 3.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13085 28719aae7019f414d9c9990dba48fbc5 191 PANTHER PTHR34848 4 185 4.2E-74 T 22-04-2016 RPIC_RS05055 d32a8fa21800c665ee97cb6e8c4607a5 318 PANTHER PTHR14226:SF24 51 305 6.6E-75 T 22-04-2016 RPIC_RS05055 d32a8fa21800c665ee97cb6e8c4607a5 318 Gene3D G3DSA:3.40.1090.10 43 214 5.3E-22 T 22-04-2016 RPIC_RS05055 d32a8fa21800c665ee97cb6e8c4607a5 318 PANTHER PTHR14226 51 305 6.6E-75 T 22-04-2016 RPIC_RS05055 d32a8fa21800c665ee97cb6e8c4607a5 318 Pfam PF01734 Patatin-like phospholipase 54 214 8.6E-28 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC_RS05055 d32a8fa21800c665ee97cb6e8c4607a5 318 SUPERFAMILY SSF52151 2 304 2.62E-61 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 PRINTS PR00189 Transthyretin signature 3 23 9.6E-7 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 PRINTS PR00189 Transthyretin signature 95 117 9.6E-7 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 SUPERFAMILY SSF49472 1 117 1.12E-41 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 22-04-2016 IPR023418 Transthyretin, thyroxine binding site RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 PANTHER PTHR10395 1 117 4.2E-44 T 22-04-2016 RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 4.2E-40 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 Pfam PF00576 HIUase/Transthyretin family 4 116 1.8E-35 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 PANTHER PTHR10395:SF7 1 117 4.2E-44 T 22-04-2016 RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 Gene3D G3DSA:2.60.40.180 2 117 6.7E-38 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily RPIC_RS11105 25bb02e2bd10a3d628d2c0a065e0635a 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 22-04-2016 IPR023419 Transthyretin, conserved site RPIC_RS17425 c6239b9995d6c514bf87a04adcd7f22e 156 Gene3D G3DSA:1.20.5.620 63 121 2.9E-12 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RPIC_RS17425 c6239b9995d6c514bf87a04adcd7f22e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.328 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIC_RS17425 c6239b9995d6c514bf87a04adcd7f22e 156 SUPERFAMILY SSF81573 63 121 4.18E-11 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain RPIC_RS17425 c6239b9995d6c514bf87a04adcd7f22e 156 PANTHER PTHR33445 1 156 6.0E-36 T 22-04-2016 RPIC_RS17425 c6239b9995d6c514bf87a04adcd7f22e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 7.6E-29 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIC_RS17425 c6239b9995d6c514bf87a04adcd7f22e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 6.7E-41 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 RPIC_RS12120 8a637302dbfdd173692dcc3afa80b4ee 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 12 217 4.9E-95 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RPIC_RS12120 8a637302dbfdd173692dcc3afa80b4ee 220 Pfam PF01144 Coenzyme A transferase 15 203 7.0E-40 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS12120 8a637302dbfdd173692dcc3afa80b4ee 220 SUPERFAMILY SSF100950 12 219 3.14E-69 T 22-04-2016 RPIC_RS12120 8a637302dbfdd173692dcc3afa80b4ee 220 Gene3D G3DSA:3.40.810.20 12 218 4.4E-84 T 22-04-2016 RPIC_RS12120 8a637302dbfdd173692dcc3afa80b4ee 220 SMART SM00882 15 212 1.3E-69 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS12120 8a637302dbfdd173692dcc3afa80b4ee 220 PANTHER PTHR13707 12 217 8.8E-89 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 PANTHER PTHR30308 2 146 2.2E-72 T 22-04-2016 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 Gene3D G3DSA:2.40.280.10 2 122 2.3E-49 T 22-04-2016 IPR023620 Small protein B RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 Pfam PF01668 SmpB protein 2 65 3.5E-28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 74.28 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 9.0E-64 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 1.1E-53 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 PANTHER PTHR30308:SF2 2 146 2.2E-72 T 22-04-2016 RPIC_RS06465 e424567cd987ea7a634713b779f1232f 148 SUPERFAMILY SSF74982 2 127 5.36E-50 T 22-04-2016 IPR023620 Small protein B RPIC_RS01300 8e48404eb06f07635a3ff678cc0bce18 210 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 24 203 2.0E-45 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related RPIC_RS01300 8e48404eb06f07635a3ff678cc0bce18 210 PANTHER PTHR37481 16 208 4.4E-21 T 22-04-2016 RPIC_RS01300 8e48404eb06f07635a3ff678cc0bce18 210 PANTHER PTHR37481:SF1 16 208 4.4E-21 T 22-04-2016 RPIC_RS01300 8e48404eb06f07635a3ff678cc0bce18 210 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 20 202 1.2E-49 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 PANTHER PTHR11815 1 388 1.1E-232 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 PIRSF PIRSF001554 1 388 5.3E-153 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 SUPERFAMILY SSF56059 1 238 3.36E-85 T 22-04-2016 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 Gene3D G3DSA:3.30.1490.20 22 95 2.3E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 Pfam PF00549 CoA-ligase 262 382 4.0E-26 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 Pfam PF08442 ATP-grasp domain 2 202 5.5E-80 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 8.4E-160 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 SUPERFAMILY SSF52210 239 384 1.96E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 Gene3D G3DSA:3.30.470.20 96 239 1.1E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.076 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 RPIC_RS02325 945b6afdbb1e5c9960c5e475001760f2 388 Gene3D G3DSA:3.40.50.261 241 383 1.1E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 Gene3D G3DSA:3.40.50.150 108 291 4.7E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 PANTHER PTHR18895 16 277 2.7E-86 T 22-04-2016 RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 296 32.875 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 PANTHER PTHR18895:SF69 16 277 2.7E-86 T 22-04-2016 RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 290 1.6E-70 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 296 2.5E-94 T 22-04-2016 RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 SUPERFAMILY SSF53335 72 294 1.11E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS14935 951d961cf911c89a6b3e21036ee4ed4f 298 PIRSF PIRSF000401 1 298 3.0E-102 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RPIC_RS00750 e05fff9df92369a11113210c38a41163 330 SUPERFAMILY SSF56529 77 324 1.27E-58 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS00750 e05fff9df92369a11113210c38a41163 330 PANTHER PTHR11820 8 324 2.7E-131 T 22-04-2016 RPIC_RS00750 e05fff9df92369a11113210c38a41163 330 Gene3D G3DSA:3.90.850.10 67 308 5.1E-41 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS00750 e05fff9df92369a11113210c38a41163 330 PANTHER PTHR11820:SF85 8 324 2.7E-131 T 22-04-2016 RPIC_RS00750 e05fff9df92369a11113210c38a41163 330 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 3.1E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS05785 0b033cd2485780e5b9323484c2525ed0 207 SUPERFAMILY SSF51735 3 161 2.67E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05785 0b033cd2485780e5b9323484c2525ed0 207 Pfam PF05368 NmrA-like family 3 137 2.4E-7 T 22-04-2016 IPR008030 NmrA-like domain RPIC_RS05785 0b033cd2485780e5b9323484c2525ed0 207 Gene3D G3DSA:3.40.50.720 3 135 6.9E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05785 0b033cd2485780e5b9323484c2525ed0 207 PANTHER PTHR14194 3 203 2.4E-35 T 22-04-2016 RPIC_RS04640 4cc5294f8be1096fb714e5b6a52f37de 559 Pfam PF01476 LysM domain 46 92 1.1E-4 T 22-04-2016 IPR018392 LysM domain RPIC_RS04640 4cc5294f8be1096fb714e5b6a52f37de 559 Pfam PF04773 FecR protein 129 229 4.3E-16 T 22-04-2016 IPR006860 FecR protein RPIC_RS04640 4cc5294f8be1096fb714e5b6a52f37de 559 Gene3D G3DSA:3.10.350.10 45 91 7.2E-6 T 22-04-2016 IPR018392 LysM domain RPIC_RS04640 4cc5294f8be1096fb714e5b6a52f37de 559 SUPERFAMILY SSF54106 45 92 6.28E-5 T 22-04-2016 IPR018392 LysM domain RPIC_RS04640 4cc5294f8be1096fb714e5b6a52f37de 559 PIRSF PIRSF029644 8 536 4.9E-173 T 22-04-2016 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 RPIC_RS04640 4cc5294f8be1096fb714e5b6a52f37de 559 SMART SM00257 45 92 3.0E-5 T 22-04-2016 IPR018392 LysM domain RPIC_RS09400 5c53e63344fd2cd7e41ba3fb34b6a76c 597 Gene3D G3DSA:3.40.50.1820 199 566 6.1E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09400 5c53e63344fd2cd7e41ba3fb34b6a76c 597 PANTHER PTHR36837 74 596 9.9E-197 T 22-04-2016 RPIC_RS09400 5c53e63344fd2cd7e41ba3fb34b6a76c 597 SUPERFAMILY SSF53474 233 533 6.76E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09400 5c53e63344fd2cd7e41ba3fb34b6a76c 597 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 106 273 4.9E-70 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- RPIC_RS09400 5c53e63344fd2cd7e41ba3fb34b6a76c 597 PANTHER PTHR36837:SF2 74 596 9.9E-197 T 22-04-2016 RPIC_RS09400 5c53e63344fd2cd7e41ba3fb34b6a76c 597 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 73 595 3.8E-228 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 RPIC_RS14740 3f5afcd6d2490f42e015895dc21e2b17 294 Gene3D G3DSA:2.70.98.10 4 289 3.8E-18 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC_RS14740 3f5afcd6d2490f42e015895dc21e2b17 294 Pfam PF01263 Aldose 1-epimerase 5 282 1.1E-27 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIC_RS14740 3f5afcd6d2490f42e015895dc21e2b17 294 PANTHER PTHR10091:SF5 3 292 8.7E-23 T 22-04-2016 RPIC_RS14740 3f5afcd6d2490f42e015895dc21e2b17 294 SUPERFAMILY SSF74650 3 289 2.01E-49 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC_RS14740 3f5afcd6d2490f42e015895dc21e2b17 294 PANTHER PTHR10091 3 292 8.7E-23 T 22-04-2016 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.675 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 78 8.2E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 179 389 3.3E-84 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 PANTHER PTHR22926:SF5 2 152 6.3E-159 T 22-04-2016 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 PANTHER PTHR22926:SF5 175 389 6.3E-159 T 22-04-2016 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 Pfam PF00953 Glycosyl transferase family 4 99 307 6.9E-35 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 PANTHER PTHR22926 2 152 6.3E-159 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS15240 72ab5e7c6e5f865fa48410e7f6cb80c4 389 PANTHER PTHR22926 175 389 6.3E-159 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 PANTHER PTHR30514:SF3 6 258 3.0E-29 T 22-04-2016 RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 Gene3D G3DSA:1.10.10.10 4 79 3.7E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 Gene3D G3DSA:3.40.50.10490 112 257 1.2E-12 T 22-04-2016 RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 Pfam PF01380 SIS domain 132 257 1.1E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 SUPERFAMILY SSF53697 114 262 2.22E-19 T 22-04-2016 RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 PANTHER PTHR30514 6 258 3.0E-29 T 22-04-2016 RPIC_RS18195 eb5f24b7c8edc14d5edce7591f515536 302 SUPERFAMILY SSF46689 5 80 2.33E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 5.4E-29 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 SUPERFAMILY SSF52080 4 141 9.16E-45 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 PANTHER PTHR12934 1 141 3.5E-65 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 Gene3D G3DSA:3.100.10.10 32 142 9.3E-24 T 22-04-2016 RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 5.5E-47 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 19.528 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RPIC_RS16185 67d75820ba3d6b49f1d0ce985c05d2e7 143 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS09450 c67e5df2f393aaec24f9bac0c692cbe3 633 PANTHER PTHR30540 24 563 3.2E-235 T 22-04-2016 RPIC_RS09450 c67e5df2f393aaec24f9bac0c692cbe3 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 13 633 34.427 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup RPIC_RS09450 c67e5df2f393aaec24f9bac0c692cbe3 633 Pfam PF02705 K+ potassium transporter 22 554 1.4E-212 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 RPIC_RS09450 c67e5df2f393aaec24f9bac0c692cbe3 633 PANTHER PTHR30540:SF7 24 563 3.2E-235 T 22-04-2016 RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 2.7E-49 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 PANTHER PTHR10344 1 202 1.4E-56 T 22-04-2016 RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 27.897 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 PANTHER PTHR10344:SF0 1 202 1.4E-56 T 22-04-2016 RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 SUPERFAMILY SSF52540 1 202 5.02E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 Pfam PF02223 Thymidylate kinase 8 197 4.8E-45 T 22-04-2016 RPIC_RS07055 a23f699cf51a791f8cc41160971702f3 205 Gene3D G3DSA:3.40.50.300 2 203 4.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS10430 a7bb396676bfb8db6e700c928b20f673 137 PANTHER PTHR34309 1 136 8.3E-49 T 22-04-2016 RPIC_RS10430 a7bb396676bfb8db6e700c928b20f673 137 Pfam PF03928 Haem-degrading 9 130 2.6E-28 T 22-04-2016 IPR005624 Haem-degrading RPIC_RS10430 a7bb396676bfb8db6e700c928b20f673 137 PANTHER PTHR34309:SF4 1 136 8.3E-49 T 22-04-2016 RPIC_RS10430 a7bb396676bfb8db6e700c928b20f673 137 SUPERFAMILY SSF143744 2 133 1.44E-35 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 PANTHER PTHR24096 2 455 1.7E-116 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 Gene3D G3DSA:3.40.50.980 167 317 1.0E-32 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 Gene3D G3DSA:3.40.50.980 6 166 1.1E-33 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 SUPERFAMILY SSF56801 6 458 3.4E-116 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 Pfam PF00501 AMP-binding enzyme 10 409 3.5E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 457 3.7E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 Gene3D G3DSA:3.30.300.30 404 458 7.8E-18 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 Gene3D G3DSA:2.30.38.10 323 402 2.5E-17 T 22-04-2016 RPIC_RS10120 bf0ca87eaf98e01aa27554326f09cee7 472 ProSitePatterns PS00455 Putative AMP-binding domain signature. 160 171 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 SUPERFAMILY SSF52833 3 108 2.31E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 PIRSF PIRSF000077 2 108 1.1E-44 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 Gene3D G3DSA:3.40.30.10 2 108 3.9E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.1E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 PRINTS PR00421 Thioredoxin family signature 24 32 4.4E-10 T 22-04-2016 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 PRINTS PR00421 Thioredoxin family signature 72 83 4.4E-10 T 22-04-2016 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 PRINTS PR00421 Thioredoxin family signature 32 41 4.4E-10 T 22-04-2016 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 Pfam PF00085 Thioredoxin 5 107 1.6E-35 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC_RS05125 d8ae8c560f2400d27f8138bdd4a3c060 108 PANTHER PTHR10438 4 108 7.3E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RPIC_RS18535 84d17aed6752ff7cfa5d88c38724b7ab 262 Gene3D G3DSA:3.20.20.150 1 258 8.7E-91 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS18535 84d17aed6752ff7cfa5d88c38724b7ab 262 PANTHER PTHR12110 1 262 1.5E-101 T 22-04-2016 RPIC_RS18535 84d17aed6752ff7cfa5d88c38724b7ab 262 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.3E-32 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS18535 84d17aed6752ff7cfa5d88c38724b7ab 262 PIRSF PIRSF006241 1 261 6.3E-98 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 RPIC_RS18535 84d17aed6752ff7cfa5d88c38724b7ab 262 PANTHER PTHR12110:SF12 1 262 1.5E-101 T 22-04-2016 RPIC_RS18535 84d17aed6752ff7cfa5d88c38724b7ab 262 SUPERFAMILY SSF51658 1 258 5.24E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 Pfam PF00083 Sugar (and other) transporter 59 443 2.9E-27 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 SUPERFAMILY SSF103473 15 441 9.02E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 329 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 Gene3D G3DSA:1.20.1250.20 23 219 2.9E-26 T 22-04-2016 RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 PANTHER PTHR23508 12 443 6.8E-73 T 22-04-2016 RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 Gene3D G3DSA:1.20.1250.20 249 438 1.2E-14 T 22-04-2016 RPIC_RS06860 749ebdb3c431732921d2300e15605c93 445 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 PANTHER PTHR11019 41 303 2.6E-46 T 22-04-2016 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 300 4.0E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 284 4.0E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 Pfam PF12852 Cupin 2 184 1.4E-33 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 Pfam PF12833 Helix-turn-helix domain 223 301 1.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 Gene3D G3DSA:1.10.10.60 203 253 1.2E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 SMART SM00342 217 300 1.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 Gene3D G3DSA:2.60.120.280 41 182 2.5E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 PANTHER PTHR11019:SF77 41 303 2.6E-46 T 22-04-2016 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 Gene3D G3DSA:1.10.10.60 254 302 4.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 SUPERFAMILY SSF46689 253 302 9.41E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 SUPERFAMILY SSF46689 201 251 1.43E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS09665 dbbcfe0592feef523880220730c6561a 304 SUPERFAMILY SSF51215 6 77 1.31E-9 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 265 2.3E-101 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 SMART SM00559 53 181 3.8E-35 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 SUPERFAMILY SSF100939 1 264 1.24E-51 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 PANTHER PTHR41251:SF1 3 302 2.9E-87 T 22-04-2016 RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 PIRSF PIRSF006493 1 303 2.4E-94 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 PANTHER PTHR41251 3 302 2.9E-87 T 22-04-2016 RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 Gene3D G3DSA:2.40.290.10 5 155 2.5E-11 T 22-04-2016 IPR016194 SPOC-like, C-terminal domain RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 263 32.439 T 22-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RPIC_RS02465 56cbb40efa6acb26b969374579ac63a8 304 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 195 2.4E-39 T 22-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 Pfam PF03949 Malic enzyme, NAD binding domain 181 375 5.5E-24 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 SMART SM00919 179 416 1.3E-138 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 Pfam PF00390 Malic enzyme, N-terminal domain 35 167 2.2E-26 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 SUPERFAMILY SSF53223 26 177 1.87E-51 T 22-04-2016 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 PANTHER PTHR23406 48 461 1.6E-167 T 22-04-2016 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 Gene3D G3DSA:3.40.50.10380 25 176 1.4E-50 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 PIRSF PIRSF036684 14 773 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 SUPERFAMILY SSF53659 445 769 1.07E-88 T 22-04-2016 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 Gene3D G3DSA:3.40.50.720 177 464 4.6E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 SMART SM01274 34 167 2.2E-78 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 Gene3D G3DSA:3.40.50.10750 584 741 6.5E-50 T 22-04-2016 RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 SUPERFAMILY SSF51735 179 468 1.66E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11140 c1a95767f4b3588269a839e50fe08d83 773 Pfam PF01515 Phosphate acetyl/butaryl transferase 446 766 5.3E-94 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 RPIC_RS10245 50466951ca58ddf43cf3d78a1cb078f4 327 Gene3D G3DSA:1.10.3720.10 88 316 4.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS10245 50466951ca58ddf43cf3d78a1cb078f4 327 PANTHER PTHR30465:SF0 1 320 5.9E-104 T 22-04-2016 RPIC_RS10245 50466951ca58ddf43cf3d78a1cb078f4 327 SUPERFAMILY SSF161098 89 305 3.6E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS10245 50466951ca58ddf43cf3d78a1cb078f4 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 319 1.6E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS10245 50466951ca58ddf43cf3d78a1cb078f4 327 PANTHER PTHR30465 1 320 5.9E-104 T 22-04-2016 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.6E-142 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 PANTHER PTHR21085 2 361 2.3E-201 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 PIRSF PIRSF001456 3 361 4.5E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 SUPERFAMILY SSF103263 4 353 5.49E-146 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 Gene3D G3DSA:3.60.150.10 9 355 1.5E-153 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 Pfam PF01264 Chorismate synthase 10 345 2.9E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS09775 2456b3a8bd7b7672f3d822e2809fa871 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.192 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS10840 04de2f3bd6e0068aa76a8f8339ea955b 210 PANTHER PTHR33269:SF1 1 196 7.8E-60 T 22-04-2016 RPIC_RS10840 04de2f3bd6e0068aa76a8f8339ea955b 210 PANTHER PTHR33269 1 196 7.8E-60 T 22-04-2016 RPIC_RS10840 04de2f3bd6e0068aa76a8f8339ea955b 210 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 165 2.0E-35 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 RPIC_RS05495 7bdf60490e00c5838acbf1bc36e269d8 227 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 11 190 6.8E-83 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RPIC_RS05495 7bdf60490e00c5838acbf1bc36e269d8 227 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 11 188 6.1E-85 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO RPIC_RS05495 7bdf60490e00c5838acbf1bc36e269d8 227 PANTHER PTHR10422 27 167 7.2E-87 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS05495 7bdf60490e00c5838acbf1bc36e269d8 227 SUPERFAMILY SSF46626 23 202 2.67E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05495 7bdf60490e00c5838acbf1bc36e269d8 227 Gene3D G3DSA:1.10.760.10 22 203 8.8E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS05495 7bdf60490e00c5838acbf1bc36e269d8 227 PANTHER PTHR10422:SF23 27 167 7.2E-87 T 22-04-2016 RPIC_RS14910 f02f256835fd730a6799f74063c22810 224 Gene3D G3DSA:3.30.460.10 78 127 7.9E-4 T 22-04-2016 RPIC_RS07340 cffaa07acd1477ed9b0750af0b852005 84 Pfam PF04973 Nicotinamide mononucleotide transporter 4 73 2.6E-8 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 RPIC_RS05665 98fb72d973c5fc6854846404fe2f0295 107 SUPERFAMILY SSF46689 3 98 2.33E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05665 98fb72d973c5fc6854846404fe2f0295 107 PANTHER PTHR33215:SF3 1 106 1.3E-22 T 22-04-2016 RPIC_RS05665 98fb72d973c5fc6854846404fe2f0295 107 PANTHER PTHR33215 1 106 1.3E-22 T 22-04-2016 RPIC_RS05665 98fb72d973c5fc6854846404fe2f0295 107 Gene3D G3DSA:1.10.10.60 8 94 2.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS05665 98fb72d973c5fc6854846404fe2f0295 107 Pfam PF01527 Transposase 1 86 4.2E-7 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 PANTHER PTHR24220:SF282 4 239 8.4E-97 T 22-04-2016 RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 SUPERFAMILY SSF50331 236 360 1.12E-22 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 Pfam PF08402 TOBE domain 276 353 1.9E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 Gene3D G3DSA:3.40.50.300 2 224 1.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 Gene3D G3DSA:2.40.50.140 278 346 5.0E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 PANTHER PTHR24220 4 239 8.4E-97 T 22-04-2016 RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 SUPERFAMILY SSF52540 2 241 7.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 SMART SM00382 27 212 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS16480 a4c3076653711557a3a0e03534d1e9b5 372 Pfam PF00005 ABC transporter 21 160 4.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 Pfam PF00463 Isocitrate lyase family 98 266 7.7E-22 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 Pfam PF00463 Isocitrate lyase family 327 388 1.1E-8 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 Pfam PF00463 Isocitrate lyase family 439 527 1.0E-12 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 PANTHER PTHR21631 165 263 3.8E-78 T 22-04-2016 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 PANTHER PTHR21631 443 528 3.8E-78 T 22-04-2016 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 PANTHER PTHR21631 314 406 3.8E-78 T 22-04-2016 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 PANTHER PTHR21631 96 144 3.8E-78 T 22-04-2016 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 SUPERFAMILY SSF51621 426 511 1.35E-127 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 SUPERFAMILY SSF51621 5 389 1.35E-127 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 Gene3D G3DSA:3.20.20.60 3 267 1.8E-140 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 Gene3D G3DSA:3.20.20.60 300 389 1.8E-140 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS02660 4e77a581aeca88be9b107e4d72e3f9a8 528 Gene3D G3DSA:3.20.20.60 426 511 1.8E-140 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 7 170 36.793 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 SUPERFAMILY SSF55068 5 177 9.29E-70 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 Pfam PF01625 Peptide methionine sulfoxide reductase 9 165 1.1E-60 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 PANTHER PTHR10173:SF34 5 165 5.3E-77 T 22-04-2016 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 Gene3D G3DSA:3.30.1060.10 4 165 2.6E-69 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 PANTHER PTHR10173 5 165 5.3E-77 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 RPIC_RS03495 d0afc37e857ce12a519a6fcb38dcaa0d 186 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 8 165 1.5E-53 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 RPIC_RS14425 653385cf563abb73963b7ccffe58fef9 280 Pfam PF14236 Domain of unknown function (DUF4338) 1 221 2.8E-57 T 22-04-2016 IPR025639 Domain of unknown function DUF4338 RPIC_RS08295 653385cf563abb73963b7ccffe58fef9 280 Pfam PF14236 Domain of unknown function (DUF4338) 1 221 2.8E-57 T 22-04-2016 IPR025639 Domain of unknown function DUF4338 RPIC_RS16465 99826f0f1b3111b69c2ec03c150b11be 286 SMART SM00880 16 281 6.4E-54 T 22-04-2016 IPR007899 CHAD domain RPIC_RS16465 99826f0f1b3111b69c2ec03c150b11be 286 Pfam PF05235 CHAD domain 18 245 2.6E-44 T 22-04-2016 IPR007899 CHAD domain RPIC_RS06560 b32ff32b80b214de5ea00d629e2e9129 231 SUPERFAMILY SSF52833 3 213 1.68E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06560 b32ff32b80b214de5ea00d629e2e9129 231 Pfam PF01323 DSBA-like thioredoxin domain 8 184 3.0E-7 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC_RS06560 b32ff32b80b214de5ea00d629e2e9129 231 Gene3D G3DSA:1.10.472.60 45 167 2.4E-41 T 22-04-2016 IPR023169 UPF0413, central domain RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 Gene3D G3DSA:3.90.1150.10 257 343 2.9E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 Pfam PF01212 Beta-eliminating lyase 7 295 8.4E-78 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 PANTHER PTHR10289 7 346 7.7E-153 T 22-04-2016 RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 PIRSF PIRSF038940 4 347 8.1E-161 T 22-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 SUPERFAMILY SSF53383 6 341 2.23E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 PANTHER PTHR10289:SF8 7 346 7.7E-153 T 22-04-2016 RPIC_RS03700 d690400e58392e044b4cf4bbc66799cf 348 Gene3D G3DSA:3.40.640.10 6 254 3.9E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 SUPERFAMILY SSF111369 143 338 3.27E-15 T 22-04-2016 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 223 405 1.6E-36 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 Gene3D G3DSA:2.40.50.100 141 172 6.5E-7 T 22-04-2016 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 Gene3D G3DSA:2.40.50.100 226 257 6.5E-7 T 22-04-2016 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 PANTHER PTHR30097:SF3 54 423 2.1E-84 T 22-04-2016 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 PANTHER PTHR30097 54 423 2.1E-84 T 22-04-2016 RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 121 331 7.4E-70 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS08870 8e64b4306458f81b0c5b18f2c3b2dc4a 510 Pfam PF11604 Copper binding periplasmic protein CusF 437 501 7.7E-19 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PANTHER PTHR10266 190 247 1.6E-45 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PANTHER PTHR10266 7 163 1.6E-45 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 Pfam PF02167 Cytochrome C1 family 34 245 9.6E-21 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 SUPERFAMILY SSF46626 188 211 3.06E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 SUPERFAMILY SSF46626 19 161 3.06E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PRINTS PR00603 Cytochrome C1 signature 106 130 4.3E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PRINTS PR00603 Cytochrome C1 signature 212 227 4.3E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PRINTS PR00603 Cytochrome C1 signature 193 212 4.3E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PRINTS PR00603 Cytochrome C1 signature 45 64 4.3E-14 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 Gene3D G3DSA:1.10.760.10 21 212 5.0E-68 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PANTHER PTHR10266:SF3 190 247 1.6E-45 T 22-04-2016 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 PANTHER PTHR10266:SF3 7 163 1.6E-45 T 22-04-2016 RPIC_RS15810 517671d3371ca8b6bfe97a1137a990a6 247 Gene3D G3DSA:1.20.5.100 217 247 5.6E-5 T 22-04-2016 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 SUPERFAMILY SSF55869 46 107 1.44E-22 T 22-04-2016 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 SUPERFAMILY SSF56349 102 324 3.53E-72 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 Gene3D G3DSA:3.90.15.10 111 242 2.3E-41 T 22-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 Gene3D G3DSA:1.20.120.380 256 331 7.7E-25 T 22-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 106 310 1.3E-32 T 22-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 190 206 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 169 183 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 146 165 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC_RS18590 07d89ec04956b4101f119af3092a5289 363 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 255 269 2.5E-9 T 22-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 RPIC_RS06260 8269956de418e68247688f536be82098 214 Pfam PF07040 Protein of unknown function (DUF1326) 13 192 1.0E-53 T 22-04-2016 IPR009758 Protein of unknown function DUF1326 RPIC_RS06260 8269956de418e68247688f536be82098 214 PIRSF PIRSF033303 1 209 1.8E-86 T 22-04-2016 IPR014581 Uncharacterised conserved protein UCP033303 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 Gene3D G3DSA:3.40.190.10 181 263 2.4E-15 T 22-04-2016 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 Pfam PF03466 LysR substrate binding domain 95 296 8.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 Gene3D G3DSA:1.10.10.10 10 87 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 Gene3D G3DSA:3.40.190.10 99 180 8.7E-23 T 22-04-2016 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 SUPERFAMILY SSF46785 8 89 9.37E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 3.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 PANTHER PTHR30537 3 296 3.3E-65 T 22-04-2016 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 SUPERFAMILY SSF53850 96 302 1.07E-30 T 22-04-2016 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06590 8a91c5c5e69542621f63f27448c0157b 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 PANTHER PTHR21666 463 629 1.7E-39 T 22-04-2016 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 Pfam PF01464 Transglycosylase SLT domain 482 587 6.1E-20 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 Gene3D G3DSA:1.10.530.10 471 634 1.4E-44 T 22-04-2016 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 SUPERFAMILY SSF53955 476 637 1.03E-44 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 SUPERFAMILY SSF48435 45 474 7.85E-107 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 Gene3D G3DSA:1.25.20.10 242 385 8.2E-39 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 Gene3D G3DSA:1.25.20.10 45 241 2.9E-45 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 Gene3D G3DSA:1.10.1240.20 404 459 4.3E-6 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RPIC_RS18160 aa0d005d7caba5b265f4f2b755b878a8 650 Pfam PF14718 Soluble lytic murein transglycosylase L domain 404 463 1.2E-6 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 SMART SM00487 37 242 1.7E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 173 181 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 SMART SM00490 282 363 2.8E-32 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 SUPERFAMILY SSF52540 94 383 4.14E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 Gene3D G3DSA:3.40.50.300 9 231 1.1E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 PANTHER PTHR24031:SF0 429 444 3.1E-182 T 22-04-2016 RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 PANTHER PTHR24031:SF0 5 401 3.1E-182 T 22-04-2016 RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 Pfam PF00270 DEAD/DEAH box helicase 42 216 1.1E-53 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 PANTHER PTHR24031 429 444 3.1E-182 T 22-04-2016 RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 PANTHER PTHR24031 5 401 3.1E-182 T 22-04-2016 RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 Gene3D G3DSA:3.40.50.300 232 396 1.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS11870 b59fe9e7cd6b01bc21a45d7ec2b4beaa 498 Pfam PF00271 Helicase conserved C-terminal domain 254 363 2.0E-29 T 22-04-2016 IPR001650 Helicase, C-terminal RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 Pfam PF00691 OmpA family 104 198 3.2E-24 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 SUPERFAMILY SSF103088 92 206 3.4E-40 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 PRINTS PR01021 OMPA domain signature 134 149 3.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 PRINTS PR01021 OMPA domain signature 149 165 3.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 PRINTS PR01021 OMPA domain signature 104 126 3.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 ProSitePatterns PS01068 OmpA-like domain. 136 180 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 PANTHER PTHR30128 38 208 4.7E-49 T 22-04-2016 RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 Pfam PF13441 YMGG-like Gly-zipper 24 66 1.1E-7 T 22-04-2016 IPR027367 YMGG-like Gly-zipper RPIC_RS12770 b1c316ea2593dbd05cbca6b6dbe1eb83 209 Gene3D G3DSA:3.30.1330.60 93 204 7.7E-42 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS13100 544c70d3953274db8e5ad77751aa061b 318 Gene3D G3DSA:3.40.50.1980 49 167 2.8E-34 T 22-04-2016 RPIC_RS13100 544c70d3953274db8e5ad77751aa061b 318 Pfam PF01497 Periplasmic binding protein 52 277 6.9E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RPIC_RS13100 544c70d3953274db8e5ad77751aa061b 318 PANTHER PTHR30535 33 300 7.2E-61 T 22-04-2016 RPIC_RS13100 544c70d3953274db8e5ad77751aa061b 318 Gene3D G3DSA:3.40.50.1980 170 300 4.9E-34 T 22-04-2016 RPIC_RS13100 544c70d3953274db8e5ad77751aa061b 318 SUPERFAMILY SSF53807 31 298 5.49E-67 T 22-04-2016 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 7 160 1.8E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 6 161 36.129 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 PANTHER PTHR32125 3 167 4.7E-56 T 22-04-2016 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 Pfam PF02542 YgbB family 6 159 1.9E-64 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 Gene3D G3DSA:3.30.1330.50 4 161 1.6E-71 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 40 55 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS09330 097162c72ac483b11e389f99f2c82791 168 SUPERFAMILY SSF69765 4 162 6.15E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 SUPERFAMILY SSF53474 27 301 1.85E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 Pfam PF00561 alpha/beta hydrolase fold 50 287 3.9E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 Gene3D G3DSA:3.40.50.1820 18 301 1.1E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 PANTHER PTHR10992 21 302 1.5E-52 T 22-04-2016 RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 133 146 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS17755 7acd485bb593371abfcbc482dbe81902 302 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 4.8E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 PANTHER PTHR30388 8 319 6.6E-69 T 22-04-2016 RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 Pfam PF13478 XdhC Rossmann domain 173 316 8.1E-35 T 22-04-2016 IPR027051 XdhC Rossmann domain RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 PANTHER PTHR30388:SF5 8 319 6.6E-69 T 22-04-2016 RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 SUPERFAMILY SSF51735 167 252 4.33E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 25 317 1.3E-100 T 22-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 Pfam PF02625 XdhC and CoxI family 19 75 1.8E-18 T 22-04-2016 IPR003777 XdhC- CoxI RPIC_RS11060 b8b67ff7c25e788a19a5789e38076d3e 344 Gene3D G3DSA:3.40.50.720 169 252 6.3E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS19230 72072877f2bb90558dfed881e9d779a6 199 SUPERFAMILY SSF55826 113 197 1.57E-12 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS19230 72072877f2bb90558dfed881e9d779a6 199 Pfam PF04073 Aminoacyl-tRNA editing domain 134 191 5.6E-11 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS19230 72072877f2bb90558dfed881e9d779a6 199 Gene3D G3DSA:3.90.960.10 109 198 2.5E-16 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS02895 1a6c8ad26d423b36aec0eda4fa6358b4 56 Pfam PF04964 Flp/Fap pilin component 11 54 1.4E-11 T 22-04-2016 IPR007047 Flp/Fap pilin component RPIC_RS14120 d79a0e0cef7334d68f1e44e32d9abf16 235 PANTHER PTHR30183 1 231 2.3E-85 T 22-04-2016 RPIC_RS14120 d79a0e0cef7334d68f1e44e32d9abf16 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 226 1.7E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14120 d79a0e0cef7334d68f1e44e32d9abf16 235 Gene3D G3DSA:1.10.3720.10 16 232 3.8E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14120 d79a0e0cef7334d68f1e44e32d9abf16 235 SUPERFAMILY SSF161098 7 225 1.19E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14120 d79a0e0cef7334d68f1e44e32d9abf16 235 PANTHER PTHR30183:SF4 1 231 2.3E-85 T 22-04-2016 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 38 398 1.7E-23 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 SUPERFAMILY SSF53649 187 287 1.12E-37 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 SUPERFAMILY SSF53649 339 554 1.12E-37 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 SUPERFAMILY SSF53649 32 112 1.12E-37 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 Gene3D G3DSA:3.40.720.10 36 111 3.1E-24 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 Gene3D G3DSA:3.40.720.10 186 373 3.1E-24 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS12230 0a08f1c7110eab057b05c4986616fc70 575 Gene3D G3DSA:3.40.720.10 502 574 3.1E-24 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS14205 90b72a0e05f942dea2c39c76c9100bdd 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 282 6.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14205 90b72a0e05f942dea2c39c76c9100bdd 289 PANTHER PTHR30151:SF0 19 288 2.9E-89 T 22-04-2016 RPIC_RS14205 90b72a0e05f942dea2c39c76c9100bdd 289 SUPERFAMILY SSF161098 91 275 5.63E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14205 90b72a0e05f942dea2c39c76c9100bdd 289 Gene3D G3DSA:1.10.3720.10 89 284 5.0E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS14205 90b72a0e05f942dea2c39c76c9100bdd 289 PANTHER PTHR30151 19 288 2.9E-89 T 22-04-2016 RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 PANTHER PTHR10799:SF750 288 570 2.1E-24 T 22-04-2016 RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 SUPERFAMILY SSF55073 414 570 1.02E-42 T 22-04-2016 IPR029787 Nucleotide cyclase RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 Pfam PF00990 Diguanylate cyclase, GGDEF domain 409 567 9.1E-40 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 PANTHER PTHR10799 288 570 2.1E-24 T 22-04-2016 RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 405 571 4.8E-45 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 SMART SM00267 398 572 4.7E-52 T 22-04-2016 IPR000160 GGDEF domain RPIC_RS02640 77bdaaafcb92b3e0977351aaf14e585f 585 Gene3D G3DSA:3.30.70.270 411 571 5.3E-49 T 22-04-2016 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 SUPERFAMILY SSF54292 4 108 1.52E-32 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 Gene3D G3DSA:3.10.20.30 4 109 3.8E-33 T 22-04-2016 IPR012675 Beta-grasp domain RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 PRINTS PR00355 Adrenodoxin signature 60 74 1.3E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 PRINTS PR00355 Adrenodoxin signature 83 91 1.3E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 PRINTS PR00355 Adrenodoxin signature 42 52 1.3E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 9.8E-61 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 PANTHER PTHR23426 7 112 3.5E-39 T 22-04-2016 RPIC_RS04375 6a327e628e31c600ffff640bbd209538 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.2E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RPIC_RS03450 bf3736bea2bf610f3796232fced92cec 460 Pfam PF00860 Permease family 39 420 1.3E-69 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS03450 bf3736bea2bf610f3796232fced92cec 460 PANTHER PTHR11119:SF43 22 455 1.8E-227 T 22-04-2016 RPIC_RS03450 bf3736bea2bf610f3796232fced92cec 460 PANTHER PTHR11119 22 455 1.8E-227 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS14335 acf565d5698f91eb5e721af72360b62e 232 Pfam PF08279 HTH domain 10 63 1.0E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 RPIC_RS14335 acf565d5698f91eb5e721af72360b62e 232 SUPERFAMILY SSF46785 8 65 1.51E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14335 acf565d5698f91eb5e721af72360b62e 232 Gene3D G3DSA:1.10.10.10 3 66 1.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS14335 acf565d5698f91eb5e721af72360b62e 232 PANTHER PTHR30363:SF7 4 126 1.1E-43 T 22-04-2016 RPIC_RS14335 acf565d5698f91eb5e721af72360b62e 232 Pfam PF13280 WYL domain 140 230 4.5E-18 T 22-04-2016 IPR026881 WYL domain RPIC_RS14335 acf565d5698f91eb5e721af72360b62e 232 PANTHER PTHR30363 4 126 1.1E-43 T 22-04-2016 RPIC_RS02135 b185238fb5764e28d442ea3b32883114 164 Pfam PF10117 McrBC 5-methylcytosine restriction system component 11 90 7.6E-20 T 22-04-2016 IPR019292 5-methylcytosine restriction system component RPIC_RS13480 6d4894258207615b393f56473d82dc67 151 Pfam PF10696 Protein of unknown function (DUF2501) 79 150 1.7E-24 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 PANTHER PTHR32268 10 402 1.8E-173 T 22-04-2016 RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 Pfam PF00561 alpha/beta hydrolase fold 75 384 1.3E-35 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 46 394 6.9E-139 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 PANTHER PTHR32268:SF11 10 402 1.8E-173 T 22-04-2016 RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 SUPERFAMILY SSF53474 37 393 5.78E-103 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 Gene3D G3DSA:3.40.50.1820 58 393 4.0E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 32 397 47.847 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RPIC_RS18470 cd53e8fb6b13717cad615c2356e6f95f 404 PIRSF PIRSF000443 7 403 5.1E-142 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 Gene3D G3DSA:3.90.1200.10 110 320 3.0E-61 T 22-04-2016 RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 Pfam PF01636 Phosphotransferase enzyme family 28 263 2.0E-31 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 Gene3D G3DSA:3.30.200.20 1 107 6.4E-39 T 22-04-2016 RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 PANTHER PTHR21064 9 300 1.9E-37 T 22-04-2016 RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 SUPERFAMILY SSF56112 5 319 6.56E-68 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 Hamap MF_00301 Homoserine kinase [thrB]. 1 334 162.481 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RPIC_RS12020 9a7ea2922fb54c30c4be884236d5c585 334 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 317 1.5E-93 T 22-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 RPIC_RS14640 8604f1f2c6483a1788428688a922ffc6 345 Pfam PF00072 Response regulator receiver domain 97 159 4.8E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14640 8604f1f2c6483a1788428688a922ffc6 345 SUPERFAMILY SSF52172 17 54 5.12E-13 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS14640 8604f1f2c6483a1788428688a922ffc6 345 SUPERFAMILY SSF52172 100 174 5.12E-13 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS14640 8604f1f2c6483a1788428688a922ffc6 345 Gene3D G3DSA:3.40.50.2300 98 174 4.0E-16 T 22-04-2016 RPIC_RS14640 8604f1f2c6483a1788428688a922ffc6 345 Gene3D G3DSA:3.40.50.2300 17 52 4.0E-16 T 22-04-2016 RPIC_RS13860 00946408fa8251f329da3648961a1657 181 SUPERFAMILY SSF55729 5 156 1.72E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS13860 00946408fa8251f329da3648961a1657 181 PANTHER PTHR23091 1 145 1.2E-18 T 22-04-2016 RPIC_RS13860 00946408fa8251f329da3648961a1657 181 Gene3D G3DSA:3.40.630.30 3 156 1.1E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS13860 00946408fa8251f329da3648961a1657 181 Pfam PF00583 Acetyltransferase (GNAT) family 69 145 1.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 PANTHER PTHR13779:SF28 218 289 1.6E-74 T 22-04-2016 RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 PANTHER PTHR13779:SF28 26 190 1.6E-74 T 22-04-2016 RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 SMART SM00382 86 214 9.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 PANTHER PTHR13779 218 289 1.6E-74 T 22-04-2016 RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 PANTHER PTHR13779 26 190 1.6E-74 T 22-04-2016 RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 SUPERFAMILY SSF52540 48 195 8.5E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 Gene3D G3DSA:3.40.50.300 57 196 3.8E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15165 fccc464f51e1ddb3ae740347f37602e5 294 Pfam PF05673 Protein of unknown function (DUF815) 31 287 1.7E-104 T 22-04-2016 IPR008533 Domain of unknown function DUF815 RPIC_RS18625 070dda57ebeb97281530c21e976cf1f4 132 SUPERFAMILY SSF54593 2 131 2.95E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS18625 070dda57ebeb97281530c21e976cf1f4 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 3.1E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS18625 070dda57ebeb97281530c21e976cf1f4 132 Gene3D G3DSA:3.10.180.10 1 129 3.2E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS18625 070dda57ebeb97281530c21e976cf1f4 132 PANTHER PTHR35006 1 131 9.2E-41 T 22-04-2016 RPIC_RS03055 c0d0f2a2952cdb40efa92e627a6afe89 363 PANTHER PTHR22926 8 362 2.7E-100 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS03055 c0d0f2a2952cdb40efa92e627a6afe89 363 Pfam PF00953 Glycosyl transferase family 4 76 232 4.9E-28 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 RPIC_RS03055 c0d0f2a2952cdb40efa92e627a6afe89 363 PANTHER PTHR22926:SF7 8 362 2.7E-100 T 22-04-2016 RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 Pfam PF00155 Aminotransferase class I and II 37 388 1.0E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 PANTHER PTHR11751:SF401 11 390 6.5E-139 T 22-04-2016 RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 SUPERFAMILY SSF53383 10 393 6.59E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 Gene3D G3DSA:3.90.1150.10 257 393 9.0E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 Gene3D G3DSA:3.40.640.10 51 256 1.6E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RPIC_RS03220 7834124867f51beb093b778cd3c860f8 394 PANTHER PTHR11751 11 390 6.5E-139 T 22-04-2016 RPIC_RS05925 ac540b7583bd836697f1a0028b07f80b 297 SUPERFAMILY SSF88713 15 41 5.0E-21 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS05925 ac540b7583bd836697f1a0028b07f80b 297 SUPERFAMILY SSF88713 86 254 5.0E-21 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS05925 ac540b7583bd836697f1a0028b07f80b 297 Pfam PF01522 Polysaccharide deacetylase 15 170 6.2E-7 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS05925 ac540b7583bd836697f1a0028b07f80b 297 Gene3D G3DSA:3.20.20.370 14 38 1.4E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS05925 ac540b7583bd836697f1a0028b07f80b 297 Gene3D G3DSA:3.20.20.370 86 268 1.4E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 3 193 4.7E-74 T 22-04-2016 IPR014289 RNA polymerase sigma-24-related RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 PANTHER PTHR30173 8 185 2.8E-23 T 22-04-2016 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 Gene3D G3DSA:1.10.10.10 123 186 8.0E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 Pfam PF04542 Sigma-70 region 2 10 74 5.5E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 SUPERFAMILY SSF88946 9 81 3.18E-14 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 Gene3D G3DSA:1.10.1740.10 9 95 1.8E-14 T 22-04-2016 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 185 2.3E-20 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 PANTHER PTHR30173:SF24 8 185 2.8E-23 T 22-04-2016 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 SUPERFAMILY SSF88659 117 185 1.38E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS18435 e1d707818b02c0b94d83ce9fc498264b 197 Pfam PF08281 Sigma-70, region 4 131 181 1.6E-10 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 Pfam PF02321 Outer membrane efflux protein 35 220 1.9E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 Pfam PF02321 Outer membrane efflux protein 245 433 8.1E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 30 448 1.7E-96 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 SUPERFAMILY SSF56954 33 448 3.14E-88 T 22-04-2016 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 PANTHER PTHR30026:SF3 17 460 1.1E-89 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 PANTHER PTHR30026 17 460 1.1E-89 T 22-04-2016 RPIC_RS03145 d336c2d2b583fb5f1996801683ee73d2 478 Gene3D G3DSA:1.20.1600.10 20 440 5.0E-78 T 22-04-2016 RPIC_RS10710 2f99e11caa20d3162662b2dce52c7749 219 PANTHER PTHR12714 98 219 2.3E-24 T 22-04-2016 RPIC_RS10710 2f99e11caa20d3162662b2dce52c7749 219 Pfam PF04191 Phospholipid methyltransferase 104 204 1.8E-14 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 RPIC_RS04860 05adf01b45474d40acfa06f348568e99 221 PANTHER PTHR22939 35 202 1.0E-37 T 22-04-2016 RPIC_RS04860 05adf01b45474d40acfa06f348568e99 221 PANTHER PTHR22939:SF104 35 202 1.0E-37 T 22-04-2016 RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 Gene3D G3DSA:1.10.600.10 2 269 1.0E-84 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 Pfam PF00348 Polyprenyl synthetase 31 259 8.3E-50 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 SUPERFAMILY SSF48576 3 270 1.1E-80 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 PANTHER PTHR12001:SF23 3 278 4.8E-96 T 22-04-2016 RPIC_RS11965 82b225327f52f9ded0f961a5fa4df0e7 303 PANTHER PTHR12001 3 278 4.8E-96 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 SUPERFAMILY SSF81338 5 214 1.44E-35 T 22-04-2016 IPR023271 Aquaporin-like RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 Pfam PF00230 Major intrinsic protein 6 145 8.1E-13 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 Gene3D G3DSA:1.20.1080.10 6 212 1.1E-26 T 22-04-2016 IPR023271 Aquaporin-like RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 PRINTS PR00783 Major intrinsic protein family signature 85 104 6.3E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 PRINTS PR00783 Major intrinsic protein family signature 6 25 6.3E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 PRINTS PR00783 Major intrinsic protein family signature 48 72 6.3E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS17750 ca354a4830e842e9f4753833f4658c57 235 PRINTS PR00783 Major intrinsic protein family signature 128 146 6.3E-19 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS18165 47018ea808ee2a7b093c80b3049e2d17 334 Gene3D G3DSA:3.40.50.720 2 248 4.7E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS18165 47018ea808ee2a7b093c80b3049e2d17 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 227 1.4E-13 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 RPIC_RS18165 47018ea808ee2a7b093c80b3049e2d17 334 PANTHER PTHR12126 5 317 1.3E-52 T 22-04-2016 RPIC_RS18165 47018ea808ee2a7b093c80b3049e2d17 334 SUPERFAMILY SSF51735 1 292 1.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 PANTHER PTHR11695 23 334 1.9E-124 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 PANTHER PTHR11695:SF528 23 334 1.9E-124 T 22-04-2016 RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 SUPERFAMILY SSF51735 123 301 1.01E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 Pfam PF00107 Zinc-binding dehydrogenase 158 293 2.4E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 Pfam PF16884 N-terminal domain of oxidoreductase 7 113 2.0E-43 T 22-04-2016 RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 SUPERFAMILY SSF50129 3 164 5.3E-46 T 22-04-2016 IPR011032 GroES-like RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 Gene3D G3DSA:3.40.50.720 141 303 2.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 SMART SM00829 18 333 9.1E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RPIC_RS07130 ee14a659688f3224832ed24bda2be348 336 Gene3D G3DSA:3.90.180.10 2 140 2.2E-55 T 22-04-2016 IPR011032 GroES-like RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 Gene3D G3DSA:1.10.10.10 1 82 5.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 7.4E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.7E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 SUPERFAMILY SSF46785 11 112 1.28E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 PANTHER PTHR30126 1 309 3.4E-143 T 22-04-2016 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 Pfam PF03466 LysR substrate binding domain 89 293 6.8E-45 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 PANTHER PTHR30126:SF6 1 309 3.4E-143 T 22-04-2016 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 Gene3D G3DSA:3.40.190.10 91 179 2.3E-23 T 22-04-2016 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 SUPERFAMILY SSF53850 91 298 7.44E-44 T 22-04-2016 RPIC_RS06080 e4e48f1ddd862a335fee67dfed7ff6a1 319 Gene3D G3DSA:3.40.190.10 180 259 1.2E-25 T 22-04-2016 RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 Pfam PF02515 CoA-transferase family III 6 374 1.2E-129 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 Gene3D G3DSA:3.30.1540.10 224 306 1.6E-28 T 22-04-2016 RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 Gene3D G3DSA:3.40.50.10540 307 399 1.3E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 Gene3D G3DSA:3.40.50.10540 2 217 1.3E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 PANTHER PTHR24023 49 384 8.9E-39 T 22-04-2016 RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 PANTHER PTHR24023:SF593 49 384 8.9E-39 T 22-04-2016 RPIC_RS05170 7fa0a732580ab3ff3ec38d66ee4f3042 402 SUPERFAMILY SSF89796 4 397 3.4E-133 T 22-04-2016 IPR023606 CoA-transferase family III domain RPIC_RS01600 7a9103253e5286bdbabcf4df38ae9e05 415 PANTHER PTHR35793 3 415 8.4E-180 T 22-04-2016 RPIC_RS01600 7a9103253e5286bdbabcf4df38ae9e05 415 PIRSF PIRSF036542 2 415 2.1E-204 T 22-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB RPIC_RS01600 7a9103253e5286bdbabcf4df38ae9e05 415 PANTHER PTHR35793:SF2 3 415 8.4E-180 T 22-04-2016 RPIC_RS01600 7a9103253e5286bdbabcf4df38ae9e05 415 Pfam PF07670 Nucleoside recognition 50 155 5.6E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RPIC_RS01600 7a9103253e5286bdbabcf4df38ae9e05 415 Pfam PF07670 Nucleoside recognition 282 385 8.6E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 RPIC_RS12095 617eed4a6dc4d83368e3e77cee18227a 289 PANTHER PTHR11795 8 289 2.0E-70 T 22-04-2016 RPIC_RS12095 617eed4a6dc4d83368e3e77cee18227a 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 277 5.4E-39 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS12095 617eed4a6dc4d83368e3e77cee18227a 289 PANTHER PTHR11795:SF396 8 289 2.0E-70 T 22-04-2016 RPIC_RS17620 464166439ea45486132f75018be8ff2d 179 PANTHER PTHR22884 24 160 9.4E-30 T 22-04-2016 RPIC_RS17620 464166439ea45486132f75018be8ff2d 179 SUPERFAMILY SSF82199 27 167 6.02E-43 T 22-04-2016 RPIC_RS17620 464166439ea45486132f75018be8ff2d 179 PANTHER PTHR22884:SF346 24 160 9.4E-30 T 22-04-2016 RPIC_RS17620 464166439ea45486132f75018be8ff2d 179 SMART SM00317 29 147 6.5E-30 T 22-04-2016 IPR001214 SET domain GO:0005515 RPIC_RS17620 464166439ea45486132f75018be8ff2d 179 Pfam PF00856 SET domain 40 141 3.5E-17 T 22-04-2016 IPR001214 SET domain GO:0005515 RPIC_RS17620 464166439ea45486132f75018be8ff2d 179 Gene3D G3DSA:2.170.270.10 26 169 3.3E-43 T 22-04-2016 RPIC_RS06625 8e76a169444b479c68db8f1a6d7f4464 212 PANTHER PTHR34846 21 200 2.6E-44 T 22-04-2016 RPIC_RS06625 8e76a169444b479c68db8f1a6d7f4464 212 PANTHER PTHR34846:SF1 21 200 2.6E-44 T 22-04-2016 RPIC_RS06625 8e76a169444b479c68db8f1a6d7f4464 212 Gene3D G3DSA:1.20.1290.10 61 200 1.5E-22 T 22-04-2016 IPR029032 AhpD-like RPIC_RS06625 8e76a169444b479c68db8f1a6d7f4464 212 SUPERFAMILY SSF69118 29 208 1.3E-27 T 22-04-2016 IPR029032 AhpD-like RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 Gene3D G3DSA:1.10.600.10 2 308 1.6E-102 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 PANTHER PTHR12001 1 309 3.3E-116 T 22-04-2016 IPR017446 Polyprenyl synthetase-related RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 PANTHER PTHR12001:SF47 1 309 3.3E-116 T 22-04-2016 RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 190 202 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 68 82 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 Pfam PF00348 Polyprenyl synthetase 19 250 3.8E-77 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 RPIC_RS15115 74f909698be3df04c7e1298f03aaefe5 309 SUPERFAMILY SSF48576 3 308 9.44E-100 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 Gene3D G3DSA:1.10.1670.10 233 286 1.8E-17 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 130 269 1.5E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 SMART SM00478 133 285 3.8E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 PANTHER PTHR10242:SF0 93 289 1.1E-59 T 22-04-2016 RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 SUPERFAMILY SSF48150 115 285 1.15E-42 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 Gene3D G3DSA:1.10.340.30 124 230 3.4E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 RPIC_RS04990 6cec222f86b9ba824dd338960ad81249 290 PANTHER PTHR10242 93 289 1.1E-59 T 22-04-2016 RPIC_RS01245 444fd583c44eabe880789aa6d9aaeb34 647 Gene3D G3DSA:3.40.50.300 57 104 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01245 444fd583c44eabe880789aa6d9aaeb34 647 Gene3D G3DSA:3.40.50.300 208 316 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01245 444fd583c44eabe880789aa6d9aaeb34 647 SUPERFAMILY SSF52540 181 314 4.25E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01245 444fd583c44eabe880789aa6d9aaeb34 647 SUPERFAMILY SSF52540 392 453 4.25E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01245 444fd583c44eabe880789aa6d9aaeb34 647 SUPERFAMILY SSF52540 34 119 4.25E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01245 444fd583c44eabe880789aa6d9aaeb34 647 Pfam PF00350 Dynamin family 58 272 6.7E-15 T 22-04-2016 IPR022812 Dynamin superfamily RPIC_RS07600 c873c6f69538709695521b7e8525181d 528 PANTHER PTHR30258 231 521 3.2E-35 T 22-04-2016 RPIC_RS07600 c873c6f69538709695521b7e8525181d 528 SUPERFAMILY SSF52540 103 517 2.19E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07600 c873c6f69538709695521b7e8525181d 528 Gene3D G3DSA:3.30.450.90 84 146 4.0E-6 T 22-04-2016 RPIC_RS07600 c873c6f69538709695521b7e8525181d 528 Gene3D G3DSA:3.40.50.300 242 519 2.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07600 c873c6f69538709695521b7e8525181d 528 Pfam PF00437 Type II/IV secretion system protein 235 387 1.4E-23 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 215 35.142 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 PIRSF PIRSF000495 2 217 9.2E-67 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 PANTHER PTHR21235:SF1 4 215 2.6E-77 T 22-04-2016 RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 SUPERFAMILY SSF52317 2 215 1.78E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 Gene3D G3DSA:3.40.50.880 1 215 1.2E-75 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 Pfam PF00117 Glutamine amidotransferase class-I 6 212 1.7E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 214 1.8E-61 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 RPIC_RS15920 91d743ce51db1ede5795a3eb2e890a80 217 PANTHER PTHR21235 4 215 2.6E-77 T 22-04-2016 RPIC_RS02290 aee557fa3b4aa61bffb05f8b1060d302 216 SMART SM00479 37 216 3.8E-24 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS02290 aee557fa3b4aa61bffb05f8b1060d302 216 PANTHER PTHR30231:SF7 1 210 2.2E-73 T 22-04-2016 RPIC_RS02290 aee557fa3b4aa61bffb05f8b1060d302 216 Pfam PF00929 Exonuclease 39 206 1.2E-18 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS02290 aee557fa3b4aa61bffb05f8b1060d302 216 Gene3D G3DSA:3.30.420.10 36 212 3.7E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS02290 aee557fa3b4aa61bffb05f8b1060d302 216 SUPERFAMILY SSF53098 35 212 1.45E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS02290 aee557fa3b4aa61bffb05f8b1060d302 216 PANTHER PTHR30231 1 210 2.2E-73 T 22-04-2016 RPIC_RS01955 d1c6560f13e346261a229e3021e699ec 250 Gene3D G3DSA:3.40.1130.10 64 237 2.9E-21 T 22-04-2016 RPIC_RS01955 d1c6560f13e346261a229e3021e699ec 250 SUPERFAMILY SSF69593 8 248 3.66E-39 T 22-04-2016 RPIC_RS01955 d1c6560f13e346261a229e3021e699ec 250 SMART SM00563 77 193 6.2E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS01955 d1c6560f13e346261a229e3021e699ec 250 PANTHER PTHR10434 4 246 2.2E-48 T 22-04-2016 RPIC_RS01955 d1c6560f13e346261a229e3021e699ec 250 Pfam PF01553 Acyltransferase 66 190 3.0E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS08495 b7514c6147db0aff9f4e83c22aa340de 999 Pfam PF13700 Domain of unknown function (DUF4158) 4 166 1.4E-36 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RPIC_RS08495 b7514c6147db0aff9f4e83c22aa340de 999 Pfam PF01526 Tn3 transposase DDE domain 583 969 7.4E-140 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 97 106 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 Pfam PF07687 Peptidase dimerisation domain 208 318 4.4E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 PANTHER PTHR11014 9 408 1.1E-53 T 22-04-2016 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 SUPERFAMILY SSF53187 14 210 1.94E-45 T 22-04-2016 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 SUPERFAMILY SSF53187 335 418 1.94E-45 T 22-04-2016 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 SUPERFAMILY SSF55031 211 329 6.43E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 Pfam PF01546 Peptidase family M20/M25/M40 99 417 1.9E-24 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 Gene3D G3DSA:3.40.630.10 359 421 6.2E-45 T 22-04-2016 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 Gene3D G3DSA:3.40.630.10 23 219 6.2E-45 T 22-04-2016 RPIC_RS17190 353af3e9c7ebfc4093222690361df8b5 424 Gene3D G3DSA:3.30.70.360 220 317 2.0E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 Pfam PF13531 Bacterial extracellular solute-binding protein 45 288 1.4E-46 T 22-04-2016 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 PANTHER PTHR30368 26 339 2.5E-184 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 28 334 2.7E-153 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 Gene3D G3DSA:3.40.190.10 180 303 2.2E-30 T 22-04-2016 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 Gene3D G3DSA:3.40.190.10 29 173 2.1E-50 T 22-04-2016 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 PANTHER PTHR30368:SF2 26 339 2.5E-184 T 22-04-2016 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 SUPERFAMILY SSF53850 28 336 1.65E-93 T 22-04-2016 RPIC_RS06015 88f54a79a80172a924b092953584dd83 339 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 153 161 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 RPIC_RS11295 57ce6311bfc81fff39b058b0d6457741 153 SUPERFAMILY SSF55729 31 145 4.04E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS11295 57ce6311bfc81fff39b058b0d6457741 153 Gene3D G3DSA:3.40.630.30 47 144 8.2E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS07535 3b91318da2872e1fa0a69a85a8c0ec31 109 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 4 76 3.4E-6 T 22-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RPIC_RS02340 2325d8edde2521af028dea1577936185 173 Pfam PF13633 Prokaryotic N-terminal methylation site 14 39 5.9E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02340 2325d8edde2521af028dea1577936185 173 PANTHER PTHR30093 9 62 4.8E-14 T 22-04-2016 RPIC_RS02340 2325d8edde2521af028dea1577936185 173 Pfam PF00114 Pilin (bacterial filament) 45 173 4.0E-11 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 RPIC_RS02340 2325d8edde2521af028dea1577936185 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02340 2325d8edde2521af028dea1577936185 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.0E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS02340 2325d8edde2521af028dea1577936185 173 SUPERFAMILY SSF54523 16 172 2.04E-19 T 22-04-2016 RPIC_RS02340 2325d8edde2521af028dea1577936185 173 Gene3D G3DSA:3.30.700.10 16 173 5.9E-32 T 22-04-2016 RPIC_RS18530 44db0f3761ff1aba2fa594c5d34d3667 441 Gene3D G3DSA:1.20.1250.20 26 230 3.4E-46 T 22-04-2016 RPIC_RS18530 44db0f3761ff1aba2fa594c5d34d3667 441 Pfam PF07690 Major Facilitator Superfamily 34 400 2.9E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS18530 44db0f3761ff1aba2fa594c5d34d3667 441 Gene3D G3DSA:1.20.1250.20 249 434 1.4E-23 T 22-04-2016 RPIC_RS18530 44db0f3761ff1aba2fa594c5d34d3667 441 SUPERFAMILY SSF103473 23 439 3.27E-86 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS18530 44db0f3761ff1aba2fa594c5d34d3667 441 PANTHER PTHR11662:SF3 19 427 4.5E-155 T 22-04-2016 RPIC_RS18530 44db0f3761ff1aba2fa594c5d34d3667 441 PANTHER PTHR11662 19 427 4.5E-155 T 22-04-2016 RPIC_RS04220 b70d7ed89a55313b0743b8ab03bca628 252 PIRSF PIRSF030959 1 252 1.7E-102 T 22-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing RPIC_RS04220 b70d7ed89a55313b0743b8ab03bca628 252 Gene3D G3DSA:1.25.40.10 92 248 4.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS04220 b70d7ed89a55313b0743b8ab03bca628 252 SUPERFAMILY SSF48452 89 229 2.66E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS04220 b70d7ed89a55313b0743b8ab03bca628 252 Pfam PF14559 Tetratricopeptide repeat 99 155 1.6E-9 T 22-04-2016 RPIC_RS00850 3621216ed446ecb9c10400fbf47b15bf 700 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 698 6.1E-262 T 22-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC_RS00850 3621216ed446ecb9c10400fbf47b15bf 700 PANTHER PTHR31956:SF1 4 516 2.1E-150 T 22-04-2016 RPIC_RS00850 3621216ed446ecb9c10400fbf47b15bf 700 Pfam PF05506 Domain of unknown function (DUF756) 606 685 1.8E-17 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC_RS00850 3621216ed446ecb9c10400fbf47b15bf 700 Pfam PF05506 Domain of unknown function (DUF756) 506 590 2.4E-21 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 RPIC_RS00850 3621216ed446ecb9c10400fbf47b15bf 700 PANTHER PTHR31956 4 516 2.1E-150 T 22-04-2016 RPIC_RS00850 3621216ed446ecb9c10400fbf47b15bf 700 Pfam PF04185 Phosphoesterase family 48 432 3.5E-112 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 PANTHER PTHR11751 11 98 8.9E-18 T 22-04-2016 RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 SUPERFAMILY SSF46785 12 90 8.72E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 Pfam PF07729 FCD domain 82 207 7.6E-23 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 SMART SM00345 14 72 2.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 SUPERFAMILY SSF48008 79 213 1.2E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 Gene3D G3DSA:1.10.10.10 12 73 2.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 SMART SM00895 82 208 1.3E-19 T 22-04-2016 IPR011711 GntR, C-terminal RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 Gene3D G3DSA:1.20.120.530 75 213 1.2E-28 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal RPIC_RS17210 832dee69b4240f3be2bd44be823f041f 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 1.2E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 Pfam PF03466 LysR substrate binding domain 98 294 1.1E-36 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 Gene3D G3DSA:3.40.190.10 184 264 4.1E-15 T 22-04-2016 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 PANTHER PTHR30537:SF26 5 313 2.7E-109 T 22-04-2016 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 SUPERFAMILY SSF53850 99 298 1.33E-40 T 22-04-2016 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 SUPERFAMILY SSF46785 8 92 8.74E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 Gene3D G3DSA:3.40.190.10 100 183 6.5E-29 T 22-04-2016 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 5.4E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 Gene3D G3DSA:1.10.10.10 7 93 1.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00875 7a349d54a7456d3c1b3335acecd09e0f 320 PANTHER PTHR30537 5 313 2.7E-109 T 22-04-2016 RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 Pfam PF07690 Major Facilitator Superfamily 40 435 1.8E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 Gene3D G3DSA:1.20.1250.20 37 216 9.7E-18 T 22-04-2016 RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 SUPERFAMILY SSF103473 272 445 1.31E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 SUPERFAMILY SSF103473 490 513 1.31E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 SUPERFAMILY SSF103473 23 216 1.31E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 PANTHER PTHR23501 7 517 1.0E-46 T 22-04-2016 RPIC_RS06740 6998c9378ff28a8d694288990b2d3bf8 517 Gene3D G3DSA:1.20.1250.20 288 446 2.7E-8 T 22-04-2016 RPIC_RS07420 f3402ea07a0b2a960b01416b3e665616 130 Pfam PF00216 Bacterial DNA-binding protein 34 129 4.7E-16 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS07420 f3402ea07a0b2a960b01416b3e665616 130 PANTHER PTHR33175:SF1 33 128 1.1E-21 T 22-04-2016 RPIC_RS07420 f3402ea07a0b2a960b01416b3e665616 130 Gene3D G3DSA:4.10.520.10 34 129 5.3E-14 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS07420 f3402ea07a0b2a960b01416b3e665616 130 SMART SM00411 33 130 1.5E-5 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 RPIC_RS07420 f3402ea07a0b2a960b01416b3e665616 130 PANTHER PTHR33175 33 128 1.1E-21 T 22-04-2016 RPIC_RS07420 f3402ea07a0b2a960b01416b3e665616 130 SUPERFAMILY SSF47729 34 129 1.77E-13 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 Gene3D G3DSA:1.10.10.10 5 75 2.4E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 PANTHER PTHR30136 8 262 6.0E-86 T 22-04-2016 RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 SUPERFAMILY SSF46785 16 88 8.35E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 SUPERFAMILY SSF55781 81 258 4.19E-50 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 SMART SM00346 16 104 3.3E-26 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 Gene3D G3DSA:3.30.450.40 82 259 2.7E-56 T 22-04-2016 IPR029016 GAF domain-like RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 Pfam PF01614 Bacterial transcriptional regulator 134 257 4.2E-36 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 PANTHER PTHR30136:SF10 8 262 6.0E-86 T 22-04-2016 RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 Pfam PF09339 IclR helix-turn-helix domain 20 68 2.4E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 RPIC_RS12130 97cf40a2c8c39bb8e92cca736316063d 263 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 13 258 4.9E-104 T 22-04-2016 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 RPIC_RS13155 fe4d0ff22d7b2ac4e1f9d3c5f5f054cf 233 Pfam PF04402 Protein of unknown function (DUF541) 33 226 3.7E-29 T 22-04-2016 IPR007497 Protein of unknown function DUF541 RPIC_RS04830 aa73ace16626ee3fb05691fe67778f6e 305 Pfam PF12697 Alpha/beta hydrolase family 38 296 5.3E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS04830 aa73ace16626ee3fb05691fe67778f6e 305 PANTHER PTHR10992 14 304 1.3E-40 T 22-04-2016 RPIC_RS04830 aa73ace16626ee3fb05691fe67778f6e 305 SUPERFAMILY SSF53474 14 302 1.99E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS04830 aa73ace16626ee3fb05691fe67778f6e 305 Gene3D G3DSA:3.40.50.1820 14 302 3.5E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS01305 83bd302d9c811d662dba2552e65d40aa 198 SUPERFAMILY SSF56784 26 191 6.43E-39 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS01305 83bd302d9c811d662dba2552e65d40aa 198 Gene3D G3DSA:3.40.50.1000 20 190 2.0E-42 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS01305 83bd302d9c811d662dba2552e65d40aa 198 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 30 182 1.7E-46 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS01305 83bd302d9c811d662dba2552e65d40aa 198 PIRSF PIRSF006118 17 192 1.6E-70 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 RPIC_RS01305 83bd302d9c811d662dba2552e65d40aa 198 PANTHER PTHR21485 24 182 5.3E-44 T 22-04-2016 RPIC_RS07850 e450149fcce852d437afc9640f1a5393 476 Pfam PF04966 Carbohydrate-selective porin, OprB family 90 476 3.6E-47 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 SUPERFAMILY SSF52821 5 144 4.58E-40 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 SMART SM00450 13 139 9.4E-20 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 SMART SM00450 167 287 6.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 SUPERFAMILY SSF52821 170 294 2.36E-30 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 Pfam PF00581 Rhodanese-like domain 173 283 4.4E-6 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 Pfam PF00581 Rhodanese-like domain 23 135 9.0E-16 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 PANTHER PTHR11364 1 294 2.9E-87 T 22-04-2016 RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 PANTHER PTHR11364:SF0 1 294 2.9E-87 T 22-04-2016 RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 ProSitePatterns PS00683 Rhodanese C-terminal signature. 271 281 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 Gene3D G3DSA:3.40.250.10 157 294 1.3E-32 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11985 8951815153cf660116d9b2937f44211e 295 Gene3D G3DSA:3.40.250.10 4 149 7.4E-49 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS11800 968fda51b78fe69fc5b15ce0a0b5aa02 489 SUPERFAMILY SSF50249 39 125 3.43E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS11800 968fda51b78fe69fc5b15ce0a0b5aa02 489 Gene3D G3DSA:2.40.50.140 31 125 2.0E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS11800 968fda51b78fe69fc5b15ce0a0b5aa02 489 SMART SM00316 37 119 1.6E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 RPIC_RS11800 968fda51b78fe69fc5b15ce0a0b5aa02 489 PANTHER PTHR30001 1 489 4.8E-188 T 22-04-2016 RPIC_RS11800 968fda51b78fe69fc5b15ce0a0b5aa02 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 2.3E-154 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 RPIC_RS11800 968fda51b78fe69fc5b15ce0a0b5aa02 489 Pfam PF10150 Ribonuclease E/G family 121 392 4.4E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 RPIC_RS11125 f8e8e30148511999ee2e8b35a189c704 320 SUPERFAMILY SSF88713 5 310 6.39E-90 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS11125 f8e8e30148511999ee2e8b35a189c704 320 Gene3D G3DSA:3.20.20.370 4 311 3.9E-105 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS11125 f8e8e30148511999ee2e8b35a189c704 320 PANTHER PTHR10587 11 308 2.2E-151 T 22-04-2016 RPIC_RS11125 f8e8e30148511999ee2e8b35a189c704 320 PANTHER PTHR10587:SF72 11 308 2.2E-151 T 22-04-2016 RPIC_RS11125 f8e8e30148511999ee2e8b35a189c704 320 Pfam PF01522 Polysaccharide deacetylase 76 166 1.7E-12 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS11125 f8e8e30148511999ee2e8b35a189c704 320 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 310 2.8E-158 T 22-04-2016 IPR017625 Putative urate catabolism protein RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 PANTHER PTHR33406 140 396 4.9E-13 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 PANTHER PTHR33406 8 89 4.9E-13 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 PANTHER PTHR33406:SF2 140 396 4.9E-13 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 PANTHER PTHR33406:SF2 8 89 4.9E-13 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 Gene3D G3DSA:1.20.1640.10 666 800 8.3E-6 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 Gene3D G3DSA:1.20.1640.10 208 397 9.0E-20 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 SUPERFAMILY SSF82866 671 800 1.05E-17 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 SUPERFAMILY SSF82866 181 398 8.89E-23 T 22-04-2016 RPIC_RS01485 640cb0fe14dff3ddd09ff67d013fd4da 810 Pfam PF03176 MMPL family 161 427 1.2E-18 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 RPIC_RS06530 f2cbed1c25482b44e2f86ccfb141aa19 111 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 1 109 4.4E-37 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 RPIC_RS06530 f2cbed1c25482b44e2f86ccfb141aa19 111 PANTHER PTHR30536:SF5 1 111 3.9E-43 T 22-04-2016 RPIC_RS06530 f2cbed1c25482b44e2f86ccfb141aa19 111 PANTHER PTHR30536 1 111 3.9E-43 T 22-04-2016 RPIC_RS02910 153de460c8460bdae3f82e42fa6d2609 423 Pfam PF09594 Protein of unknown function (DUF2029) 116 344 2.9E-32 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIC_RS04690 b41d0173739a2ec3d5743ac998186708 311 Pfam PF01263 Aldose 1-epimerase 13 305 4.7E-29 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIC_RS04690 b41d0173739a2ec3d5743ac998186708 311 SUPERFAMILY SSF74650 12 308 1.13E-47 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC_RS04690 b41d0173739a2ec3d5743ac998186708 311 PANTHER PTHR10091 14 310 8.7E-34 T 22-04-2016 RPIC_RS04690 b41d0173739a2ec3d5743ac998186708 311 Gene3D G3DSA:2.70.98.10 13 307 4.6E-20 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC_RS04690 b41d0173739a2ec3d5743ac998186708 311 PANTHER PTHR10091:SF5 14 310 8.7E-34 T 22-04-2016 RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 SUPERFAMILY SSF53822 25 382 2.22E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 PANTHER PTHR30483 9 383 3.0E-123 T 22-04-2016 RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 Gene3D G3DSA:3.40.50.2300 144 300 9.3E-26 T 22-04-2016 RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 PANTHER PTHR30483:SF7 9 383 3.0E-123 T 22-04-2016 RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 Pfam PF13458 Periplasmic binding protein 26 372 2.1E-51 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 Gene3D G3DSA:3.40.50.2300 24 143 6.0E-30 T 22-04-2016 RPIC_RS00765 11a507eb813c51b493d1dfa682bb7501 387 Gene3D G3DSA:3.40.50.2300 301 364 6.0E-30 T 22-04-2016 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 173 2.9E-43 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 PANTHER PTHR30128 69 173 3.6E-46 T 22-04-2016 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 PRINTS PR01021 OMPA domain signature 73 95 1.7E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 PRINTS PR01021 OMPA domain signature 118 134 1.7E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 PRINTS PR01021 OMPA domain signature 103 118 1.7E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 Gene3D G3DSA:3.30.1330.60 64 172 4.5E-33 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 PANTHER PTHR30128:SF18 69 173 3.6E-46 T 22-04-2016 RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 SUPERFAMILY SSF103088 68 173 4.19E-33 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS03345 6eda41020d93e1ddd23dd751e8ae9b60 173 Pfam PF00691 OmpA family 72 167 1.9E-20 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS00080 93bb4fce8ee9b9dc5d0fe1ebb9978c58 217 PANTHER PTHR30614 7 217 1.7E-83 T 22-04-2016 RPIC_RS00080 93bb4fce8ee9b9dc5d0fe1ebb9978c58 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 108 1.9E-28 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RPIC_RS00080 93bb4fce8ee9b9dc5d0fe1ebb9978c58 217 PANTHER PTHR30614:SF8 7 217 1.7E-83 T 22-04-2016 RPIC_RS00080 93bb4fce8ee9b9dc5d0fe1ebb9978c58 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 198 3.7E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS00080 93bb4fce8ee9b9dc5d0fe1ebb9978c58 217 Gene3D G3DSA:1.10.3720.10 14 213 1.6E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS00080 93bb4fce8ee9b9dc5d0fe1ebb9978c58 217 SUPERFAMILY SSF161098 15 202 2.22E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS13880 b1def712bb5a9c096760580433dcb6d9 216 SUPERFAMILY SSF54626 46 215 6.8E-28 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 RPIC_RS13880 b1def712bb5a9c096760580433dcb6d9 216 Pfam PF16036 Chalcone isomerase-like 48 215 9.8E-48 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 RPIC_RS10940 ab66b031e027df861acd4d827c335cde 290 PANTHER PTHR15362 38 180 7.9E-33 T 22-04-2016 RPIC_RS10940 ab66b031e027df861acd4d827c335cde 290 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 88 110 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC_RS10940 ab66b031e027df861acd4d827c335cde 290 Pfam PF01066 CDP-alcohol phosphatidyltransferase 47 110 3.0E-13 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RPIC_RS10940 ab66b031e027df861acd4d827c335cde 290 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 54 190 9.0E-34 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 RPIC_RS00350 f0925cfeb7ea557ce1a0809a4d1da65d 402 Pfam PF00155 Aminotransferase class I and II 51 392 4.6E-41 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS00350 f0925cfeb7ea557ce1a0809a4d1da65d 402 Gene3D G3DSA:3.90.1150.10 282 398 1.3E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS00350 f0925cfeb7ea557ce1a0809a4d1da65d 402 PANTHER PTHR11751:SF294 15 398 1.2E-115 T 22-04-2016 RPIC_RS00350 f0925cfeb7ea557ce1a0809a4d1da65d 402 PANTHER PTHR11751 15 398 1.2E-115 T 22-04-2016 RPIC_RS00350 f0925cfeb7ea557ce1a0809a4d1da65d 402 Gene3D G3DSA:3.40.640.10 59 281 1.5E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS00350 f0925cfeb7ea557ce1a0809a4d1da65d 402 SUPERFAMILY SSF53383 6 398 8.61E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS17635 280a779a29300d0a6818089fb19a1f32 274 SMART SM01007 31 221 2.8E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS17635 280a779a29300d0a6818089fb19a1f32 274 PANTHER PTHR10672 26 274 2.8E-75 T 22-04-2016 RPIC_RS17635 280a779a29300d0a6818089fb19a1f32 274 Gene3D G3DSA:3.40.225.10 26 242 9.3E-58 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS17635 280a779a29300d0a6818089fb19a1f32 274 SUPERFAMILY SSF53639 24 240 1.39E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS17635 280a779a29300d0a6818089fb19a1f32 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 32 221 4.2E-42 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 4.2E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 SUPERFAMILY SSF55594 1 87 3.66E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.8E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.8E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.8E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.4E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 Gene3D G3DSA:3.30.1340.10 1 87 1.7E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 PANTHER PTHR33705:SF2 1 89 2.3E-41 T 22-04-2016 RPIC_RS00985 f2691587c5ca304a3963e67d3d0d2924 89 PANTHER PTHR33705 1 89 2.3E-41 T 22-04-2016 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 SUPERFAMILY SSF53850 95 297 2.63E-46 T 22-04-2016 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 Gene3D G3DSA:1.10.10.10 5 89 8.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 PANTHER PTHR30419:SF0 1 304 3.3E-97 T 22-04-2016 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 Pfam PF03466 LysR substrate binding domain 95 295 3.7E-47 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 SUPERFAMILY SSF46785 4 115 1.13E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 PANTHER PTHR30419 1 304 3.3E-97 T 22-04-2016 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 Gene3D G3DSA:3.40.190.10 180 266 1.5E-22 T 22-04-2016 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 Gene3D G3DSA:3.40.190.10 94 179 1.1E-25 T 22-04-2016 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 3.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 3.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 3.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS02675 9e9311080e67ffbf82c2d0a4dd9b6622 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.8E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS03980 3822a349e3759d617bb403594422fd21 419 PANTHER PTHR10120:SF24 5 413 6.6E-113 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 RPIC_RS03980 3822a349e3759d617bb403594422fd21 419 Pfam PF01435 Peptidase family M48 207 414 2.3E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC_RS03980 3822a349e3759d617bb403594422fd21 419 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 26 204 7.1E-55 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 RPIC_RS03980 3822a349e3759d617bb403594422fd21 419 Gene3D G3DSA:3.30.2010.10 202 292 3.2E-19 T 22-04-2016 RPIC_RS03980 3822a349e3759d617bb403594422fd21 419 PANTHER PTHR10120 5 413 6.6E-113 T 22-04-2016 RPIC_RS06670 aae47a38345f3651319bd470cf0f7097 315 SUPERFAMILY SSF49401 180 315 5.47E-23 T 22-04-2016 IPR008966 Adhesion domain RPIC_RS06670 aae47a38345f3651319bd470cf0f7097 315 PANTHER PTHR33420:SF10 44 315 3.3E-35 T 22-04-2016 RPIC_RS06670 aae47a38345f3651319bd470cf0f7097 315 Pfam PF00419 Fimbrial protein 177 315 2.0E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC_RS06670 aae47a38345f3651319bd470cf0f7097 315 PANTHER PTHR33420 44 315 3.3E-35 T 22-04-2016 RPIC_RS06670 aae47a38345f3651319bd470cf0f7097 315 Gene3D G3DSA:2.60.40.1090 178 315 8.1E-20 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC_RS00880 11365027fec3d8ac31008d4f0940c297 99 PANTHER PTHR38036:SF1 9 99 7.4E-20 T 22-04-2016 RPIC_RS00880 11365027fec3d8ac31008d4f0940c297 99 Pfam PF04359 Protein of unknown function (DUF493) 17 99 8.7E-30 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 RPIC_RS00880 11365027fec3d8ac31008d4f0940c297 99 Gene3D G3DSA:3.30.70.1460 15 99 1.1E-31 T 22-04-2016 IPR027471 YbeD-like domain RPIC_RS00880 11365027fec3d8ac31008d4f0940c297 99 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 11 99 23.144 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 RPIC_RS00880 11365027fec3d8ac31008d4f0940c297 99 SUPERFAMILY SSF117991 15 99 7.32E-27 T 22-04-2016 IPR027471 YbeD-like domain RPIC_RS00880 11365027fec3d8ac31008d4f0940c297 99 PANTHER PTHR38036 9 99 7.4E-20 T 22-04-2016 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 Pfam PF12482 Phage integrase protein 102 192 6.1E-29 T 22-04-2016 IPR022169 Protein of unknown function DUF3701 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 Pfam PF00589 Phage integrase family 381 550 5.2E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 Gene3D G3DSA:1.10.150.130 233 337 2.9E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 PANTHER PTHR30349 304 459 4.3E-24 T 22-04-2016 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 PANTHER PTHR30349 229 280 4.3E-24 T 22-04-2016 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 PANTHER PTHR30349 481 566 4.3E-24 T 22-04-2016 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 SUPERFAMILY SSF56349 225 557 1.94E-31 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS08945 fe0d6aba2437afcb998009d78e46a3b4 566 Gene3D G3DSA:1.10.443.10 380 556 5.0E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS16585 90defe08870021fd2149b3589c9a8bf7 429 Pfam PF07690 Major Facilitator Superfamily 46 289 3.5E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS16585 90defe08870021fd2149b3589c9a8bf7 429 PANTHER PTHR23501:SF11 34 420 2.6E-136 T 22-04-2016 RPIC_RS16585 90defe08870021fd2149b3589c9a8bf7 429 Gene3D G3DSA:1.20.1250.20 242 420 5.6E-15 T 22-04-2016 RPIC_RS16585 90defe08870021fd2149b3589c9a8bf7 429 Gene3D G3DSA:1.20.1250.20 44 221 1.3E-29 T 22-04-2016 RPIC_RS16585 90defe08870021fd2149b3589c9a8bf7 429 SUPERFAMILY SSF103473 19 420 8.63E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS16585 90defe08870021fd2149b3589c9a8bf7 429 PANTHER PTHR23501 34 420 2.6E-136 T 22-04-2016 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 Gene3D G3DSA:3.40.50.450 139 282 2.9E-11 T 22-04-2016 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 SUPERFAMILY SSF102405 106 312 1.17E-42 T 22-04-2016 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 Pfam PF02481 DNA recombination-mediator protein A 99 303 4.1E-75 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 96 312 1.6E-75 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 PANTHER PTHR32039:SF8 90 400 2.7E-100 T 22-04-2016 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 SUPERFAMILY SSF47781 26 79 5.93E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 Gene3D G3DSA:1.10.150.20 32 79 1.7E-5 T 22-04-2016 RPIC_RS18260 90fee6dbe52372cb364a3f05e398be51 402 PANTHER PTHR32039 90 400 2.7E-100 T 22-04-2016 RPIC_RS07170 553bf4d2127472e25db3795561c41a8e 511 ProSitePatterns PS00218 Amino acid permeases signature. 47 78 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RPIC_RS07170 553bf4d2127472e25db3795561c41a8e 511 PIRSF PIRSF006060 1 478 2.1E-76 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS07170 553bf4d2127472e25db3795561c41a8e 511 PANTHER PTHR11785:SF204 9 472 5.0E-207 T 22-04-2016 RPIC_RS07170 553bf4d2127472e25db3795561c41a8e 511 PANTHER PTHR11785 9 472 5.0E-207 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS07170 553bf4d2127472e25db3795561c41a8e 511 Pfam PF00324 Amino acid permease 22 470 1.8E-132 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 136 164 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 PANTHER PTHR33711:SF4 1 307 2.7E-84 T 22-04-2016 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 290 5.7E-135 T 22-04-2016 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1|UniPathway: UPA00157 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 Pfam PF04444 Catechol dioxygenase N terminus 27 94 1.1E-20 T 22-04-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 Pfam PF00775 Dioxygenase 105 291 1.1E-58 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 SUPERFAMILY SSF49482 4 292 5.49E-89 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 PANTHER PTHR33711 1 307 2.7E-84 T 22-04-2016 RPIC_RS06765 925b9dba4e1899ee436bafd5f158aa13 311 Gene3D G3DSA:2.60.130.10 2 308 4.1E-104 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC_RS14685 bfa3720d06a22209387372fb9df82c69 174 Pfam PF04390 Lipopolysaccharide-assembly 22 167 5.6E-21 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RPIC_RS14685 bfa3720d06a22209387372fb9df82c69 174 PANTHER PTHR38098 10 173 1.9E-16 T 22-04-2016 RPIC_RS14685 bfa3720d06a22209387372fb9df82c69 174 Gene3D G3DSA:3.30.160.150 29 172 7.4E-44 T 22-04-2016 RPIC_RS14685 bfa3720d06a22209387372fb9df82c69 174 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 14 172 26.128 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 RPIC_RS14685 bfa3720d06a22209387372fb9df82c69 174 PANTHER PTHR38098:SF1 10 173 1.9E-16 T 22-04-2016 RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 PANTHER PTHR30341 59 345 1.2E-89 T 22-04-2016 RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 PANTHER PTHR30341:SF1 59 345 1.2E-89 T 22-04-2016 RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 Pfam PF01343 Peptidase family S49 172 317 5.5E-39 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 Gene3D G3DSA:3.90.226.10 250 334 2.4E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 Gene3D G3DSA:3.90.226.10 87 212 2.4E-46 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 SUPERFAMILY SSF52096 249 309 2.16E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS04470 3acf6104e72b338d0f73379cd1cca388 364 SUPERFAMILY SSF52096 89 220 2.16E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS09615 b998b3095456f114c47b24a2ef96761f 289 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 9.7E-149 T 22-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 RPIC_RS09615 b998b3095456f114c47b24a2ef96761f 289 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 1.1E-75 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC_RS09615 b998b3095456f114c47b24a2ef96761f 289 Gene3D G3DSA:3.40.830.10 5 272 9.7E-25 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC_RS09615 b998b3095456f114c47b24a2ef96761f 289 SUPERFAMILY SSF53213 12 279 3.01E-51 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC_RS07885 e64c6052606b914447627ed13c07b855 72 Pfam PF14454 Prokaryotic Ubiquitin 4 67 7.0E-29 T 22-04-2016 IPR032866 Prokaryotic Ubiquitin RPIC_RS07885 e64c6052606b914447627ed13c07b855 72 TIGRFAM TIGR03738 PRTRC_C: PRTRC system protein C 5 69 6.5E-32 T 22-04-2016 IPR022289 ParB-related, ThiF-related cassette, protein C RPIC_RS13385 f4daa411f1264726a1045bdbfea63abe 382 Pfam PF02445 Quinolinate synthetase A protein 48 354 3.9E-103 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC_RS13385 f4daa411f1264726a1045bdbfea63abe 382 SUPERFAMILY SSF142754 44 355 6.28E-108 T 22-04-2016 RPIC_RS13385 f4daa411f1264726a1045bdbfea63abe 382 PANTHER PTHR30573 33 378 5.4E-149 T 22-04-2016 RPIC_RS13385 f4daa411f1264726a1045bdbfea63abe 382 Hamap MF_00567 Quinolinate synthase A [nadA]. 6 361 66.746 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC_RS13385 f4daa411f1264726a1045bdbfea63abe 382 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 42 355 2.5E-112 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 RPIC_RS04015 d3e93ec67997b7e4feebf935597e2b02 333 PANTHER PTHR10314 15 326 2.8E-77 T 22-04-2016 RPIC_RS04015 d3e93ec67997b7e4feebf935597e2b02 333 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 314 2.9E-59 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS04015 d3e93ec67997b7e4feebf935597e2b02 333 SUPERFAMILY SSF53686 15 320 4.98E-70 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RPIC_RS04015 d3e93ec67997b7e4feebf935597e2b02 333 Gene3D G3DSA:3.40.50.1100 82 326 1.5E-48 T 22-04-2016 RPIC_RS04015 d3e93ec67997b7e4feebf935597e2b02 333 PANTHER PTHR10314:SF17 15 326 2.8E-77 T 22-04-2016 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 PANTHER PTHR10029 4 94 1.6E-25 T 22-04-2016 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 ProSitePatterns PS00151 Acylphosphatase signature 2. 35 51 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 PRINTS PR00112 Acylphosphatase signature 6 21 1.4E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 PRINTS PR00112 Acylphosphatase signature 27 52 1.4E-6 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 SUPERFAMILY SSF54975 5 92 3.27E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 Pfam PF00708 Acylphosphatase 6 92 1.3E-22 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 Gene3D G3DSA:3.30.70.100 6 92 8.0E-25 T 22-04-2016 RPIC_RS17690 52a46c420f5c8bad746242be9ffd3dbe 95 PANTHER PTHR10029:SF3 4 94 1.6E-25 T 22-04-2016 RPIC_RS22055 3572574700a9c7cc9b2ec12e9523f1d9 279 SUPERFAMILY SSF53474 83 265 3.36E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS22055 3572574700a9c7cc9b2ec12e9523f1d9 279 Gene3D G3DSA:3.40.50.1820 78 255 4.9E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS22055 3572574700a9c7cc9b2ec12e9523f1d9 279 PANTHER PTHR11440 84 197 4.7E-18 T 22-04-2016 RPIC_RS22055 3572574700a9c7cc9b2ec12e9523f1d9 279 Pfam PF00561 alpha/beta hydrolase fold 87 194 7.5E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 Gene3D G3DSA:3.40.50.1390 1 121 2.2E-40 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 PANTHER PTHR30461:SF9 2 188 2.4E-49 T 22-04-2016 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 Gene3D G3DSA:1.10.10.60 139 182 2.1E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 PANTHER PTHR30461 2 188 2.4E-49 T 22-04-2016 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 SMART SM00857 2 137 8.2E-58 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 SUPERFAMILY SSF53041 1 136 1.7E-43 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS12550 4a01c09b1a0021e8e14a966b1cb08dad 196 Pfam PF00239 Resolvase, N terminal domain 3 136 9.1E-44 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RPIC_RS10660 1f9e9e889246cf8230527ab4c0a87260 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 258 1.3E-54 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS10660 1f9e9e889246cf8230527ab4c0a87260 259 SUPERFAMILY SSF52096 6 259 3.22E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS10660 1f9e9e889246cf8230527ab4c0a87260 259 PANTHER PTHR11941 11 258 4.4E-81 T 22-04-2016 RPIC_RS10660 1f9e9e889246cf8230527ab4c0a87260 259 Gene3D G3DSA:3.90.226.10 7 259 1.3E-76 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS10660 1f9e9e889246cf8230527ab4c0a87260 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 466 1.5E-222 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Gene3D G3DSA:3.30.499.10 318 468 1.5E-59 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 109 117 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 134 149 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 196 209 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 120 133 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 210 223 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 401 414 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 344 355 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 83 96 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PRINTS PR00415 Aconitase family signature 287 301 2.9E-46 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 SUPERFAMILY SSF53732 2 469 1.31E-162 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Gene3D G3DSA:3.40.1060.10 167 282 4.9E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 468 58.148 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 1.1E-151 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670 328 467 1.3E-260 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670 1 308 1.3E-260 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 Gene3D G3DSA:3.30.499.10 3 158 7.7E-21 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670:SF38 328 467 1.3E-260 T 22-04-2016 RPIC_RS06850 ed36c6ae6d58fc9c4fe8388a9acaa23b 480 PANTHER PTHR11670:SF38 1 308 1.3E-260 T 22-04-2016 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 PANTHER PTHR23309 1 688 0.0 T 22-04-2016 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 SUPERFAMILY SSF51735 291 470 2.08E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 475 567 3.6E-22 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 603 689 2.1E-8 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Gene3D G3DSA:1.10.1040.10 477 568 5.4E-19 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 SUPERFAMILY SSF48179 597 691 1.28E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 SUPERFAMILY SSF48179 474 616 5.1E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 PANTHER PTHR23309:SF9 1 688 0.0 T 22-04-2016 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 294 470 2.1E-62 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Gene3D G3DSA:3.40.50.720 288 476 5.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Gene3D G3DSA:1.10.1040.10 609 690 4.3E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Gene3D G3DSA:3.90.226.10 4 277 3.4E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 180 5.1E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS07165 46fc09f0c105d8379a6e3e161b0324be 693 SUPERFAMILY SSF52096 5 286 9.42E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS17430 6a84dd7b673481b0851f1543f6f95631 88 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.863 T 22-04-2016 RPIC_RS17430 6a84dd7b673481b0851f1543f6f95631 88 SUPERFAMILY SSF81333 8 82 1.96E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RPIC_RS17430 6a84dd7b673481b0851f1543f6f95631 88 Gene3D G3DSA:1.20.20.10 7 82 1.2E-34 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 RPIC_RS17430 6a84dd7b673481b0851f1543f6f95631 88 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site RPIC_RS17430 6a84dd7b673481b0851f1543f6f95631 88 Pfam PF00137 ATP synthase subunit C 14 76 3.4E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RPIC_RS17430 6a84dd7b673481b0851f1543f6f95631 88 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 1.8E-20 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 SUPERFAMILY SSF56219 1 266 1.57E-79 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 PANTHER PTHR22748 1 269 5.8E-102 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 266 3.7E-70 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 Gene3D G3DSA:3.60.10.10 1 267 9.4E-80 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 265 9.1E-75 T 22-04-2016 RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 1.9E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS09590 6f90e788e0ea8dff7fa1b2b24d39f0d9 269 PANTHER PTHR22748:SF7 1 269 5.8E-102 T 22-04-2016 RPIC_RS15665 bf1939c988c1d13132e9a1c827fc7171 634 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 221 358 1.8E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 RPIC_RS15665 bf1939c988c1d13132e9a1c827fc7171 634 Gene3D G3DSA:3.40.50.300 1 383 5.4E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15665 bf1939c988c1d13132e9a1c827fc7171 634 Pfam PF13175 AAA ATPase domain 1 51 1.4E-9 T 22-04-2016 RPIC_RS15665 bf1939c988c1d13132e9a1c827fc7171 634 SUPERFAMILY SSF52540 1 203 1.8E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15665 bf1939c988c1d13132e9a1c827fc7171 634 SUPERFAMILY SSF52540 257 370 1.8E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS03100 4e21f301fc8a6c4522320e6998173765 136 SUPERFAMILY SSF51182 5 132 4.19E-39 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS03100 4e21f301fc8a6c4522320e6998173765 136 Pfam PF05523 WxcM-like, C-terminal 4 132 1.6E-49 T 22-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 RPIC_RS16540 306955681757e9f183e6f76338a5787d 363 Gene3D G3DSA:3.40.50.2300 12 210 7.6E-37 T 22-04-2016 RPIC_RS16540 306955681757e9f183e6f76338a5787d 363 Pfam PF13458 Periplasmic binding protein 19 352 5.6E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS16540 306955681757e9f183e6f76338a5787d 363 SUPERFAMILY SSF53822 17 362 1.0E-65 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS16540 306955681757e9f183e6f76338a5787d 363 PANTHER PTHR30483 1 352 3.3E-41 T 22-04-2016 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 PANTHER PTHR11562 7 173 4.2E-125 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 PANTHER PTHR11562 291 432 4.2E-125 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 SUPERFAMILY SSF161111 23 155 9.94E-43 T 22-04-2016 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 SUPERFAMILY SSF161111 290 358 9.94E-43 T 22-04-2016 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 428 4.4E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 PANTHER PTHR11562:SF40 7 173 4.2E-125 T 22-04-2016 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 PANTHER PTHR11562:SF40 291 432 4.2E-125 T 22-04-2016 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 Gene3D G3DSA:1.20.1510.10 25 155 5.6E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 Gene3D G3DSA:1.20.1510.10 290 356 5.6E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 Pfam PF01545 Cation efflux family 251 357 4.9E-10 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS02770 98eee17680a8dae30d0f6db59ea0d294 434 Pfam PF01545 Cation efflux family 30 156 5.3E-25 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 PANTHER PTHR31632 375 627 1.6E-49 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 Gene3D G3DSA:1.10.760.10 124 222 2.3E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 Pfam PF03239 Iron permease FTR1 family 375 501 7.0E-19 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 Pfam PF03239 Iron permease FTR1 family 503 589 8.8E-7 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 PANTHER PTHR31632:SF4 375 627 1.6E-49 T 22-04-2016 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 133 214 2.4E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS08065 a9fc8525d0ccf01e35231544fa043d54 642 SUPERFAMILY SSF46626 119 225 2.54E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17715 fcc2753dc0aede0ee57a2450584b0460 320 Pfam PF09828 Chromate resistance exported protein 185 313 2.0E-45 T 22-04-2016 IPR018634 Chromate resistance exported protein RPIC_RS17715 fcc2753dc0aede0ee57a2450584b0460 320 Pfam PF08223 PaaX-like protein C-terminal domain 6 109 1.7E-5 T 22-04-2016 IPR013225 PaaX-like, C-terminal UniPathway: UPA00930 RPIC_RS09750 f8106a61cfa50234809956a4f84b23c6 211 Gene3D G3DSA:3.40.810.20 3 210 1.5E-90 T 22-04-2016 RPIC_RS09750 f8106a61cfa50234809956a4f84b23c6 211 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 210 2.6E-93 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 RPIC_RS09750 f8106a61cfa50234809956a4f84b23c6 211 PANTHER PTHR13707 2 207 8.1E-122 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS09750 f8106a61cfa50234809956a4f84b23c6 211 SUPERFAMILY SSF100950 3 209 1.88E-69 T 22-04-2016 RPIC_RS09750 f8106a61cfa50234809956a4f84b23c6 211 Pfam PF01144 Coenzyme A transferase 7 204 4.0E-38 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS09750 f8106a61cfa50234809956a4f84b23c6 211 SMART SM00882 6 205 4.4E-81 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 RPIC_RS09630 288cd23defa684f11f1aa40e89582120 250 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 36 239 4.8E-78 T 22-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 RPIC_RS09630 288cd23defa684f11f1aa40e89582120 250 PANTHER PTHR11820 23 237 2.5E-47 T 22-04-2016 RPIC_RS09630 288cd23defa684f11f1aa40e89582120 250 Gene3D G3DSA:3.90.850.10 37 242 9.8E-53 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09630 288cd23defa684f11f1aa40e89582120 250 PANTHER PTHR11820:SF8 23 237 2.5E-47 T 22-04-2016 RPIC_RS09630 288cd23defa684f11f1aa40e89582120 250 SUPERFAMILY SSF56529 36 241 1.23E-51 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09630 288cd23defa684f11f1aa40e89582120 250 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 38 239 1.8E-44 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS06940 ddff17312b20b84adcea147a9e7f5404 67 SUPERFAMILY SSF57987 23 65 3.2E-6 T 22-04-2016 RPIC_RS06940 ddff17312b20b84adcea147a9e7f5404 67 Pfam PF10389 Bacteriophage coat protein B 21 66 8.7E-19 T 22-04-2016 IPR008020 Capsid protein G8P GO:0019028 RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 SUPERFAMILY SSF52540 314 516 7.53E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Gene3D G3DSA:3.40.50.300 136 279 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Gene3D G3DSA:3.40.50.300 6 103 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Gene3D G3DSA:3.40.50.300 322 556 5.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 PANTHER PTHR19211 1 571 9.9E-223 T 22-04-2016 RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Pfam PF16326 ABC transporter C-terminal domain 561 629 3.6E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Pfam PF00005 ABC transporter 19 185 1.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Pfam PF00005 ABC transporter 336 469 6.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 Pfam PF12848 ABC transporter 224 299 4.6E-10 T 22-04-2016 IPR032781 ABC-transporter extension domain RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 SUPERFAMILY SSF52540 11 234 3.06E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 SMART SM00382 28 230 7.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 SMART SM00382 344 514 2.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 PANTHER PTHR19211:SF45 1 571 9.9E-223 T 22-04-2016 RPIC_RS04065 efe43a571f95c6000142af30a2ca6f13 636 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 PRINTS PR01438 Universal stress protein signature 1 18 6.3E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 PRINTS PR01438 Universal stress protein signature 100 112 6.3E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 PRINTS PR01438 Universal stress protein signature 118 140 6.3E-16 T 22-04-2016 IPR006015 Universal stress protein A RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 SUPERFAMILY SSF52402 1 141 3.6E-30 T 22-04-2016 RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 PANTHER PTHR31964 1 145 1.8E-21 T 22-04-2016 RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 Gene3D G3DSA:3.40.50.620 1 143 1.4E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS17985 03f810d0bf15fefce7a47ffb269cd43c 145 Pfam PF00582 Universal stress protein family 2 140 7.4E-24 T 22-04-2016 IPR006016 UspA GO:0006950 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 Gene3D G3DSA:2.70.98.10 31 309 2.7E-38 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 PANTHER PTHR11122:SF14 34 79 1.1E-28 T 22-04-2016 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 PANTHER PTHR11122:SF14 95 312 1.1E-28 T 22-04-2016 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 SUPERFAMILY SSF74650 21 310 6.15E-46 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 Pfam PF01263 Aldose 1-epimerase 26 308 3.3E-19 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 PANTHER PTHR11122 34 79 1.1E-28 T 22-04-2016 RPIC_RS09655 5ff80943ef0f5daca10cb4c6459e6926 312 PANTHER PTHR11122 95 312 1.1E-28 T 22-04-2016 RPIC_RS05960 e8e9fc902c4e1e0265d122a45a524333 126 Gene3D G3DSA:3.40.1230.10 6 124 5.7E-45 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC_RS05960 e8e9fc902c4e1e0265d122a45a524333 126 PANTHER PTHR21192 18 123 5.5E-28 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC_RS05960 e8e9fc902c4e1e0265d122a45a524333 126 PANTHER PTHR21192:SF3 18 123 5.5E-28 T 22-04-2016 RPIC_RS05960 e8e9fc902c4e1e0265d122a45a524333 126 SUPERFAMILY SSF64076 13 123 5.36E-36 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC_RS05960 e8e9fc902c4e1e0265d122a45a524333 126 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 15 122 9.0E-34 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 SUPERFAMILY SSF53098 1 175 6.46E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 PANTHER PTHR30231:SF0 1 237 5.1E-93 T 22-04-2016 RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 Gene3D G3DSA:3.30.420.10 1 174 7.9E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 231 7.7E-89 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 Pfam PF00929 Exonuclease 4 165 6.6E-36 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 PANTHER PTHR30231 1 237 5.1E-93 T 22-04-2016 RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 210 9.5E-61 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RPIC_RS10195 985097bfac12296fdfa600a864311cf6 242 SMART SM00479 2 174 5.4E-51 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS04795 f9c80177ecb5f10f3f5b69db6ab9bcf7 96 Gene3D G3DSA:3.30.70.900 1 96 4.6E-34 T 22-04-2016 RPIC_RS04795 f9c80177ecb5f10f3f5b69db6ab9bcf7 96 Pfam PF07045 Domain of unknown function (DUF1330) 4 96 2.5E-35 T 22-04-2016 IPR010753 Domain of unknown function DUF1330 RPIC_RS04795 f9c80177ecb5f10f3f5b69db6ab9bcf7 96 SUPERFAMILY SSF54909 1 96 1.84E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS04795 f9c80177ecb5f10f3f5b69db6ab9bcf7 96 PANTHER PTHR41521 1 96 2.7E-17 T 22-04-2016 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 619 894 9.3E-118 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Pfam PF02310 B12 binding domain 426 519 1.4E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 SUPERFAMILY SSF52242 420 576 1.83E-42 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Pfam PF00809 Pterin binding enzyme 30 268 2.4E-61 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Gene3D G3DSA:3.40.50.280 423 577 3.8E-63 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 PIRSF PIRSF000381 1 882 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Gene3D G3DSA:3.10.196.10 639 909 5.0E-97 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Gene3D G3DSA:1.10.1240.10 317 408 5.0E-37 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 SUPERFAMILY SSF47644 319 410 2.75E-27 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 SUPERFAMILY SSF56507 583 909 9.42E-122 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 SMART SM01018 324 411 6.7E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Gene3D G3DSA:3.20.20.330 7 33 4.9E-4 T 22-04-2016 IPR003726 Homocysteine-binding domain RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 TIGRFAM TIGR02082 metH: methionine synthase 6 878 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Pfam PF02607 B12 binding domain 326 403 1.5E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 SUPERFAMILY SSF51717 26 300 3.92E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 RPIC_RS00710 22a460539c20db9c9106f2a966edc9fc 909 Gene3D G3DSA:3.20.20.20 34 306 1.2E-117 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 RPIC_RS01685 b1fb14e6f684cbb4950dbd38dd542a98 248 Gene3D G3DSA:3.60.10.10 4 245 4.6E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS01685 b1fb14e6f684cbb4950dbd38dd542a98 248 PANTHER PTHR15822 3 246 8.0E-49 T 22-04-2016 RPIC_RS01685 b1fb14e6f684cbb4950dbd38dd542a98 248 SUPERFAMILY SSF56219 2 245 1.83E-49 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS01685 b1fb14e6f684cbb4950dbd38dd542a98 248 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 224 4.5E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS01685 b1fb14e6f684cbb4950dbd38dd542a98 248 PANTHER PTHR15822:SF7 3 246 8.0E-49 T 22-04-2016 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 Gene3D G3DSA:1.10.443.10 126 319 6.3E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 15 325 34.905 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 SUPERFAMILY SSF56349 21 319 2.35E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 21 327 8.3E-106 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 PANTHER PTHR30349:SF17 21 328 3.1E-113 T 22-04-2016 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 PANTHER PTHR30349 21 328 3.1E-113 T 22-04-2016 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 100 1.2E-16 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 Pfam PF00589 Phage integrase family 127 311 2.3E-38 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS18340 3c9b305006475bbf1eebca2a1bafcb71 328 Gene3D G3DSA:1.10.150.130 17 113 6.5E-24 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS13960 ad2131d4b30e026a00f0abd4abb8f4ea 281 PANTHER PTHR31350 15 259 4.5E-39 T 22-04-2016 RPIC_RS13960 ad2131d4b30e026a00f0abd4abb8f4ea 281 SUPERFAMILY SSF48452 181 260 9.63E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS13960 ad2131d4b30e026a00f0abd4abb8f4ea 281 Gene3D G3DSA:1.25.40.10 193 264 1.5E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS13960 ad2131d4b30e026a00f0abd4abb8f4ea 281 Pfam PF13369 Transglutaminase-like superfamily 42 197 1.6E-47 T 22-04-2016 IPR032698 Protein SirB1, N-terminal RPIC_RS13960 ad2131d4b30e026a00f0abd4abb8f4ea 281 PANTHER PTHR31350:SF1 15 259 4.5E-39 T 22-04-2016 RPIC_RS13960 ad2131d4b30e026a00f0abd4abb8f4ea 281 Pfam PF13371 Tetratricopeptide repeat 199 270 6.1E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 PANTHER PTHR10772 1 104 5.6E-43 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.017 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 SUPERFAMILY SSF50129 1 95 3.06E-33 T 22-04-2016 IPR011032 GroES-like RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 SMART SM00883 2 94 2.0E-55 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 Gene3D G3DSA:2.30.33.40 1 95 2.1E-36 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.3E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 81 94 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 60 72 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 3 18 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS16975 48684d856e8d40c4286d8a34fc243a30 105 PRINTS PR00297 10kDa chaperonin signature 25 46 3.1E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RPIC_RS15210 67b89bf8076703a58117c466d35941af 303 PANTHER PTHR35851:SF1 2 264 9.3E-37 T 22-04-2016 RPIC_RS15210 67b89bf8076703a58117c466d35941af 303 Pfam PF08478 POTRA domain, FtsQ-type 53 110 1.1E-13 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type RPIC_RS15210 67b89bf8076703a58117c466d35941af 303 Pfam PF03799 Cell division protein FtsQ 115 239 3.7E-21 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB RPIC_RS15210 67b89bf8076703a58117c466d35941af 303 PANTHER PTHR35851 2 264 9.3E-37 T 22-04-2016 RPIC_RS15210 67b89bf8076703a58117c466d35941af 303 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 247 21.236 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 RPIC_RS08335 2e29b08b45afca51216c63d0a897c837 286 PANTHER PTHR30373 25 286 1.8E-67 T 22-04-2016 RPIC_RS08335 2e29b08b45afca51216c63d0a897c837 286 PANTHER PTHR30373:SF2 25 286 1.8E-67 T 22-04-2016 RPIC_RS08335 2e29b08b45afca51216c63d0a897c837 286 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 35 158 3.3E-37 T 22-04-2016 IPR007621 TPM domain RPIC_RS05475 a5461653cf2611cb2707e839ae1a8f5d 280 Gene3D G3DSA:3.90.1560.10 14 247 4.3E-57 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RPIC_RS05475 a5461653cf2611cb2707e839ae1a8f5d 280 SUPERFAMILY SSF142823 8 244 1.12E-47 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RPIC_RS05475 a5461653cf2611cb2707e839ae1a8f5d 280 Pfam PF04029 2-phosphosulpholactate phosphatase 27 241 4.3E-24 T 22-04-2016 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 RPIC_RS02645 2c1a5e4649950a40fb7cb4e5235ffddf 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 73 5.1E-13 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIC_RS02645 2c1a5e4649950a40fb7cb4e5235ffddf 93 Gene3D G3DSA:3.30.70.900 1 91 1.9E-12 T 22-04-2016 RPIC_RS02645 2c1a5e4649950a40fb7cb4e5235ffddf 93 SUPERFAMILY SSF54909 1 88 8.82E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS17265 c5ebcee0e00d1f1ee2f8af6f245f5fca 362 SUPERFAMILY SSF53822 30 354 9.42E-37 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS17265 c5ebcee0e00d1f1ee2f8af6f245f5fca 362 Gene3D G3DSA:3.40.50.2300 25 147 4.8E-18 T 22-04-2016 RPIC_RS17265 c5ebcee0e00d1f1ee2f8af6f245f5fca 362 Gene3D G3DSA:3.40.50.2300 283 331 4.8E-18 T 22-04-2016 RPIC_RS17265 c5ebcee0e00d1f1ee2f8af6f245f5fca 362 Pfam PF13458 Periplasmic binding protein 31 341 4.0E-30 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS00715 7b40179e92bd89f004c354923e615020 117 SUPERFAMILY SSF54593 8 114 8.32E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS00715 7b40179e92bd89f004c354923e615020 117 Gene3D G3DSA:3.10.180.10 4 114 1.6E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS13045 6f0bda51c0b3c361f8119281a4cd44a4 251 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 9 249 7.6E-65 T 22-04-2016 IPR014147 Type IV conjugative transfer protein TrbJ RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 PANTHER PTHR30413:SF2 1 261 9.8E-69 T 22-04-2016 RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 Pfam PF01061 ABC-2 type transporter 15 225 1.1E-37 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 1.5E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 1.5E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 PRINTS PR00164 ABC-2 type transport system membrane protein signature 64 86 1.5E-8 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 PIRSF PIRSF006648 11 259 1.1E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS15960 3c73737bc381ad602c516cad89e20b85 262 PANTHER PTHR30413 1 261 9.8E-69 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS10420 d5429673e60f02912cfb35edf6f3a295 136 PANTHER PTHR30558 9 135 4.8E-35 T 22-04-2016 RPIC_RS10420 d5429673e60f02912cfb35edf6f3a295 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 3.5E-32 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RPIC_RS10420 d5429673e60f02912cfb35edf6f3a295 136 PANTHER PTHR30558:SF3 9 135 4.8E-35 T 22-04-2016 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 476 1.1E-129 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 478 17.535 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 PANTHER PTHR22773:SF41 1 489 6.9E-148 T 22-04-2016 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 Pfam PF00361 Proton-conducting membrane transporter 126 424 1.2E-72 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 421 440 5.5E-5 T 22-04-2016 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 5.5E-5 T 22-04-2016 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 5.5E-5 T 22-04-2016 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 5.5E-5 T 22-04-2016 RPIC_RS10820 47ea3707179a1452036952b9d40c301b 491 PANTHER PTHR22773 1 489 6.9E-148 T 22-04-2016 RPIC_RS16340 ac0deb58752975159bfb3746c7e1b2a1 573 Pfam PF10062 Predicted secreted protein (DUF2300) 431 552 2.3E-39 T 22-04-2016 IPR018748 Domain of unknown function DUF2300, secreted RPIC_RS16340 ac0deb58752975159bfb3746c7e1b2a1 573 Pfam PF10062 Predicted secreted protein (DUF2300) 102 225 1.3E-36 T 22-04-2016 IPR018748 Domain of unknown function DUF2300, secreted RPIC_RS16340 ac0deb58752975159bfb3746c7e1b2a1 573 SUPERFAMILY SSF56601 54 248 9.72E-7 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like RPIC_RS16340 ac0deb58752975159bfb3746c7e1b2a1 573 Pfam PF08486 Stage II sporulation protein 339 397 1.1E-5 T 22-04-2016 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 Gene3D G3DSA:3.30.1370.30 2 72 2.7E-29 T 22-04-2016 RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 Gene3D G3DSA:3.30.1490.10 75 130 2.2E-27 T 22-04-2016 RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 SUPERFAMILY SSF56047 2 130 4.84E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.245 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 Pfam PF00410 Ribosomal protein S8 5 130 2.0E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16210 6bbba51fd244115357031236b78e2d46 131 PANTHER PTHR11758 1 131 1.0E-59 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 RPIC_RS04945 9a1cedf002530bb9a3cf7526e304b20c 152 PIRSF PIRSF012335 3 150 7.0E-40 T 22-04-2016 IPR016596 Protein of unknown function UCP012335 RPIC_RS04945 9a1cedf002530bb9a3cf7526e304b20c 152 Pfam PF11008 Protein of unknown function (DUF2846) 18 113 5.9E-15 T 22-04-2016 IPR022548 Domain of unknown function DUF2846 RPIC_RS09970 850da6f1fe2ff500034982311963a856 324 PANTHER PTHR30425 11 324 1.3E-148 T 22-04-2016 RPIC_RS09970 850da6f1fe2ff500034982311963a856 324 PANTHER PTHR30425:SF1 11 324 1.3E-148 T 22-04-2016 RPIC_RS09970 850da6f1fe2ff500034982311963a856 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 316 4.9E-91 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RPIC_RS09970 850da6f1fe2ff500034982311963a856 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 313 4.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09970 850da6f1fe2ff500034982311963a856 324 SUPERFAMILY SSF161098 31 308 1.31E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09970 850da6f1fe2ff500034982311963a856 324 Gene3D G3DSA:1.10.3720.10 31 320 6.1E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS12595 7893ac926101201a8344f5f028a04b52 221 PANTHER PTHR35562:SF2 27 216 7.2E-43 T 22-04-2016 RPIC_RS12595 7893ac926101201a8344f5f028a04b52 221 PANTHER PTHR35562 27 216 7.2E-43 T 22-04-2016 RPIC_RS12595 7893ac926101201a8344f5f028a04b52 221 SMART SM00463 132 216 6.9E-12 T 22-04-2016 IPR002625 Smr domain RPIC_RS12595 7893ac926101201a8344f5f028a04b52 221 Pfam PF01713 Smr domain 135 216 5.3E-26 T 22-04-2016 IPR002625 Smr domain RPIC_RS12595 7893ac926101201a8344f5f028a04b52 221 SUPERFAMILY SSF160443 133 216 4.58E-19 T 22-04-2016 IPR002625 Smr domain RPIC_RS01195 8803c1987bfa33f1490970d100842dd1 87 Gene3D G3DSA:3.30.70.20 4 76 5.1E-19 T 22-04-2016 RPIC_RS01195 8803c1987bfa33f1490970d100842dd1 87 PANTHER PTHR24960 1 75 4.6E-27 T 22-04-2016 RPIC_RS01195 8803c1987bfa33f1490970d100842dd1 87 PANTHER PTHR24960:SF38 1 75 4.6E-27 T 22-04-2016 RPIC_RS01195 8803c1987bfa33f1490970d100842dd1 87 Pfam PF12838 4Fe-4S dicluster domain 9 57 1.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS01195 8803c1987bfa33f1490970d100842dd1 87 SUPERFAMILY SSF54862 4 76 3.87E-20 T 22-04-2016 RPIC_RS01195 8803c1987bfa33f1490970d100842dd1 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS17470 7a1c7ce04f11fa69acc0153b8eba2dff 382 PANTHER PTHR30483 9 380 4.5E-141 T 22-04-2016 RPIC_RS17470 7a1c7ce04f11fa69acc0153b8eba2dff 382 Gene3D G3DSA:3.40.50.2300 24 218 3.4E-48 T 22-04-2016 RPIC_RS17470 7a1c7ce04f11fa69acc0153b8eba2dff 382 PANTHER PTHR30483:SF7 9 380 4.5E-141 T 22-04-2016 RPIC_RS17470 7a1c7ce04f11fa69acc0153b8eba2dff 382 Pfam PF13458 Periplasmic binding protein 24 377 1.5E-56 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS17470 7a1c7ce04f11fa69acc0153b8eba2dff 382 SUPERFAMILY SSF53822 25 380 2.75E-78 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 SUPERFAMILY SSF53383 12 382 5.78E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 Gene3D G3DSA:3.90.1150.10 254 384 8.7E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 PIRSF PIRSF000390 10 385 2.9E-102 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 Gene3D G3DSA:3.40.640.10 13 251 5.4E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 PANTHER PTHR30244 4 385 2.6E-121 T 22-04-2016 RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 20 379 6.0E-111 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RPIC_RS05945 1dc085fd1219725a452df964f56c78a6 386 PANTHER PTHR30244:SF3 4 385 2.6E-121 T 22-04-2016 RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 Pfam PF13476 AAA domain 5 118 1.9E-6 T 22-04-2016 RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 SUPERFAMILY SSF52540 647 768 3.09E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 SUPERFAMILY SSF52540 25 100 3.09E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 SUPERFAMILY SSF52540 131 244 3.09E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 Gene3D G3DSA:3.40.50.300 266 322 8.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 Gene3D G3DSA:3.40.50.300 228 229 8.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 Gene3D G3DSA:3.40.50.300 666 768 3.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 Gene3D G3DSA:3.40.50.300 2 202 3.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08045 5fe98ef6f1c90882335d1f41bd8b1f08 774 Gene3D G3DSA:3.40.50.300 334 335 3.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14630 06a7018c26857c6c068dc59e90bf820c 109 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 1.9E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 RPIC_RS14630 06a7018c26857c6c068dc59e90bf820c 109 PANTHER PTHR10160 10 96 1.0E-32 T 22-04-2016 RPIC_RS02840 0ffdb83bd23424db983e74587a466752 165 Pfam PF07811 TadE-like protein 9 51 5.4E-12 T 22-04-2016 IPR012495 TadE-like RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 Gene3D G3DSA:3.40.50.150 10 208 1.9E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 SUPERFAMILY SSF53335 460 522 1.38E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 SUPERFAMILY SSF53335 10 274 1.38E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 Gene3D G3DSA:3.90.120.10 290 291 6.0E-8 T 22-04-2016 RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 Gene3D G3DSA:3.90.120.10 370 397 6.0E-8 T 22-04-2016 RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 Gene3D G3DSA:3.90.120.10 453 511 6.0E-8 T 22-04-2016 RPIC_RS11595 46a8056993aefdb7fc934d2690d7db85 559 Gene3D G3DSA:3.90.120.10 209 236 6.0E-8 T 22-04-2016 RPIC_RS17885 24218dddae091041f8c06d6da4cb7549 125 Pfam PF11387 Protein of unknown function (DUF2795) 74 117 5.2E-16 T 22-04-2016 IPR021527 Protein of unknown function DUF2795 RPIC_RS07470 a864b96a30d867c275277a951d663620 435 SUPERFAMILY SSF46785 148 251 8.84E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07470 a864b96a30d867c275277a951d663620 435 Pfam PF01051 Initiator Replication protein 35 248 2.4E-24 T 22-04-2016 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 RPIC_RS07470 a864b96a30d867c275277a951d663620 435 Gene3D G3DSA:1.10.10.10 161 251 7.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS07470 a864b96a30d867c275277a951d663620 435 Gene3D G3DSA:1.10.10.10 40 146 1.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05695 a2e01821fd8a13b58fac626e77de084d 525 SUPERFAMILY SSF53649 212 451 1.09E-14 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS05695 a2e01821fd8a13b58fac626e77de084d 525 Gene3D G3DSA:3.40.720.10 213 450 4.6E-10 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS05695 a2e01821fd8a13b58fac626e77de084d 525 Pfam PF00884 Sulfatase 213 481 2.3E-26 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RPIC_RS11015 571a50802f394c12a5ed824c5b1883c1 198 Pfam PF01810 LysE type translocator 15 194 1.0E-11 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS11015 571a50802f394c12a5ed824c5b1883c1 198 PANTHER PTHR30086 1 196 4.7E-17 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 SUPERFAMILY SSF47928 3 105 5.75E-19 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PANTHER PTHR11910:SF1 8 178 2.2E-38 T 22-04-2016 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PANTHER PTHR11910 8 178 2.2E-38 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 9.3E-48 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 Gene3D G3DSA:1.10.520.20 2 105 7.0E-24 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.574 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 5.4E-36 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 7.2E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 7.2E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PRINTS PR00125 ATP synthase delta subunit signature 135 150 7.2E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 7.2E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS17420 469ea5ddc3f3cb8fc7d023af1dadf470 178 PRINTS PR00125 ATP synthase delta subunit signature 150 168 7.2E-23 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 34 399 3.5E-121 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 PIRSF PIRSF001434 2 400 3.6E-118 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 Gene3D G3DSA:3.40.640.10 13 260 2.1E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 Gene3D G3DSA:3.90.1150.10 263 399 2.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 SUPERFAMILY SSF53383 36 398 1.79E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 PANTHER PTHR11808 36 402 1.7E-130 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 398 3.2E-89 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 RPIC_RS09360 bc968efa93f83022bb0eb997aef2499f 403 PANTHER PTHR11808:SF45 36 402 1.7E-130 T 22-04-2016 RPIC_RS11075 9107f89fa6066966296e762842c6b4f0 190 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 2.6E-23 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RPIC_RS11075 9107f89fa6066966296e762842c6b4f0 190 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.0E-18 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RPIC_RS11075 9107f89fa6066966296e762842c6b4f0 190 PANTHER PTHR12608 1 186 8.6E-34 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 RPIC_RS12540 b5f98ecca2c26db5026fb9921258db8e 376 Gene3D G3DSA:3.40.50.300 1 171 5.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS12540 b5f98ecca2c26db5026fb9921258db8e 376 Pfam PF05707 Zonular occludens toxin (Zot) 46 170 5.4E-22 T 22-04-2016 IPR008900 Zona occludens toxin RPIC_RS11180 3bf602c713342b39869f94bcb9276282 145 Pfam PF12779 YXWGXW repeat (2 copies) 54 76 3.4E-6 T 22-04-2016 IPR024447 YXWGXW repeat RPIC_RS10885 71d567ebc9598337db6e8f3f72a25bea 119 PANTHER PTHR11058:SF10 3 119 3.4E-64 T 22-04-2016 RPIC_RS10885 71d567ebc9598337db6e8f3f72a25bea 119 PANTHER PTHR11058 3 119 3.4E-64 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RPIC_RS10885 71d567ebc9598337db6e8f3f72a25bea 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 1.4E-37 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 RPIC_RS10885 71d567ebc9598337db6e8f3f72a25bea 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.433 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 RPIC_RS21065 a05341ef8408cca290e4bae666fb0f5c 109 SUPERFAMILY SSF141868 3 107 4.18E-42 T 22-04-2016 IPR001633 EAL domain RPIC_RS21065 a05341ef8408cca290e4bae666fb0f5c 109 Gene3D G3DSA:3.20.20.450 2 107 5.1E-45 T 22-04-2016 IPR001633 EAL domain RPIC_RS21065 a05341ef8408cca290e4bae666fb0f5c 109 PANTHER PTHR33121:SF13 1 109 1.9E-34 T 22-04-2016 RPIC_RS21065 a05341ef8408cca290e4bae666fb0f5c 109 PANTHER PTHR33121 1 109 1.9E-34 T 22-04-2016 RPIC_RS21065 a05341ef8408cca290e4bae666fb0f5c 109 SMART SM00052 2 106 1.1E-6 T 22-04-2016 IPR001633 EAL domain RPIC_RS21065 a05341ef8408cca290e4bae666fb0f5c 109 Pfam PF00563 EAL domain 4 101 5.3E-35 T 22-04-2016 IPR001633 EAL domain RPIC_RS20580 50184355f2407f01ae27e6a1e77c19f2 343 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 1 14 6.7E-21 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS20580 50184355f2407f01ae27e6a1e77c19f2 343 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 46 58 6.7E-21 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS20580 50184355f2407f01ae27e6a1e77c19f2 343 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 250 265 6.7E-21 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS20580 50184355f2407f01ae27e6a1e77c19f2 343 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 322 338 6.7E-21 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS20580 50184355f2407f01ae27e6a1e77c19f2 343 PANTHER PTHR30075 1 343 6.6E-102 T 22-04-2016 RPIC_RS20580 50184355f2407f01ae27e6a1e77c19f2 343 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 1 343 7.5E-105 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 RPIC_RS00175 c79d6ebb73dbdcfa5fe83357069fb8e8 297 PANTHER PTHR30606:SF5 8 297 6.2E-70 T 22-04-2016 RPIC_RS00175 c79d6ebb73dbdcfa5fe83357069fb8e8 297 PANTHER PTHR30606 8 297 6.2E-70 T 22-04-2016 RPIC_RS00175 c79d6ebb73dbdcfa5fe83357069fb8e8 297 PIRSF PIRSF026649 1 297 2.1E-81 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC_RS00175 c79d6ebb73dbdcfa5fe83357069fb8e8 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 287 7.6E-60 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 SUPERFAMILY SSF52833 3 161 1.1E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 Gene3D G3DSA:3.40.30.10 77 146 1.9E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 PANTHER PTHR10371 2 157 2.0E-58 T 22-04-2016 RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 156 7.0E-51 T 22-04-2016 RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 8.1E-66 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RPIC_RS10865 83240fca19b68b788b6e82a125f5050e 167 PIRSF PIRSF000216 1 167 1.2E-59 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 RPIC_RS24895 83f49b22af10fa1969b343d949df1e29 108 Gene3D G3DSA:1.10.10.10 9 88 3.4E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS24895 83f49b22af10fa1969b343d949df1e29 108 SUPERFAMILY SSF46894 17 83 1.46E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 49.95 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 141 5.5E-33 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 8.0E-55 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 PANTHER PTHR34701 2 120 2.3E-42 T 22-04-2016 RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 SUPERFAMILY SSF89447 2 129 1.7E-38 T 22-04-2016 RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 9.3E-15 T 22-04-2016 IPR020603 MraZ domain RPIC_RS15270 80ba2dc035f708c355f1f12ae0b1b758 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 1.1E-13 T 22-04-2016 IPR020603 MraZ domain RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 PANTHER PTHR30544 6 356 1.8E-164 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 PIRSF PIRSF006004 3 365 2.8E-146 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 357 2.5E-135 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 SUPERFAMILY SSF102114 103 310 7.19E-13 T 22-04-2016 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 Gene3D G3DSA:3.20.20.70 104 332 4.4E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 353 71.886 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 Pfam PF04055 Radical SAM superfamily 108 283 1.3E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 RPIC_RS05245 621b4080e19d7728ef4c83009fc4c457 383 PANTHER PTHR30544:SF5 6 356 1.8E-164 T 22-04-2016 RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 PANTHER PTHR41542 4 177 7.5E-29 T 22-04-2016 RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 PANTHER PTHR41542 206 338 7.5E-29 T 22-04-2016 RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 SUPERFAMILY SSF54427 203 338 1.45E-10 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 PANTHER PTHR41542:SF1 4 177 7.5E-29 T 22-04-2016 RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 PANTHER PTHR41542:SF1 206 338 7.5E-29 T 22-04-2016 RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 Pfam PF04280 Tim44-like domain 207 337 9.1E-18 T 22-04-2016 IPR007379 Tim44-like domain RPIC_RS01635 94bc0adb853a44e39e3ac47aab042fd8 339 SMART SM00978 206 337 1.1E-48 T 22-04-2016 IPR007379 Tim44-like domain RPIC_RS17440 97209c302aeafd42622d9540afe54517 182 Pfam PF03899 ATP synthase I chain 68 169 1.1E-17 T 22-04-2016 IPR005598 ATP synthase protein I RPIC_RS07160 bd6dfc38bd8b7db71535cca2102d7f11 213 SUPERFAMILY SSF52499 6 210 2.09E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC_RS07160 bd6dfc38bd8b7db71535cca2102d7f11 213 PANTHER PTHR11080 8 212 2.5E-60 T 22-04-2016 RPIC_RS07160 bd6dfc38bd8b7db71535cca2102d7f11 213 Pfam PF00857 Isochorismatase family 8 202 3.1E-29 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC_RS07160 bd6dfc38bd8b7db71535cca2102d7f11 213 Gene3D G3DSA:3.40.50.850 6 211 5.1E-63 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RPIC_RS07160 bd6dfc38bd8b7db71535cca2102d7f11 213 PANTHER PTHR11080:SF2 8 212 2.5E-60 T 22-04-2016 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 PIRSF PIRSF005917 9 297 1.2E-88 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 97 108 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 PANTHER PTHR21091:SF18 5 215 2.0E-64 T 22-04-2016 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 SUPERFAMILY SSF53790 18 241 1.14E-68 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 218 7.9E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 Gene3D G3DSA:3.40.1010.10 19 127 9.1E-11 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 Gene3D G3DSA:3.30.950.10 128 244 4.4E-33 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 20 293 1.7E-65 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 19 243 32.719 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RPIC_RS17160 9b927c4444425c416a705089b93f8410 300 PANTHER PTHR21091 5 215 2.0E-64 T 22-04-2016 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 PANTHER PTHR11748:SF97 18 470 1.5E-237 T 22-04-2016 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 SUPERFAMILY SSF55103 230 470 7.52E-72 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 Gene3D G3DSA:1.10.45.10 430 469 7.5E-15 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 PANTHER PTHR11748 18 470 1.5E-237 T 22-04-2016 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 Gene3D G3DSA:3.30.465.10 109 227 3.7E-47 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 SUPERFAMILY SSF56176 12 227 1.87E-71 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 227 469 7.6E-61 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 Pfam PF01565 FAD binding domain 53 189 1.6E-38 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS14290 39344a6031d8eda261ec97c5162e4ca7 472 Gene3D G3DSA:3.30.43.10 8 108 5.1E-30 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS18335 31fdafe0b0ac448cd1d8e240df2aee86 229 Pfam PF04340 Protein of unknown function, DUF484 2 227 3.7E-32 T 22-04-2016 IPR007435 Protein of unknown function DUF484 RPIC_RS18335 31fdafe0b0ac448cd1d8e240df2aee86 229 PANTHER PTHR38765 1 227 6.6E-26 T 22-04-2016 RPIC_RS11900 2eebef2f086ac46b33c52045b0a11e79 336 SUPERFAMILY SSF56281 36 326 2.36E-54 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS11900 2eebef2f086ac46b33c52045b0a11e79 336 Pfam PF00753 Metallo-beta-lactamase superfamily 97 304 5.3E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS11900 2eebef2f086ac46b33c52045b0a11e79 336 PANTHER PTHR23200 33 333 3.5E-71 T 22-04-2016 RPIC_RS11900 2eebef2f086ac46b33c52045b0a11e79 336 PANTHER PTHR23200:SF46 33 333 3.5E-71 T 22-04-2016 RPIC_RS11900 2eebef2f086ac46b33c52045b0a11e79 336 Gene3D G3DSA:3.60.15.10 38 326 4.8E-60 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS11900 2eebef2f086ac46b33c52045b0a11e79 336 SMART SM00849 98 304 1.1E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 PANTHER PTHR34990:SF1 8 269 5.9E-71 T 22-04-2016 RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 SUPERFAMILY SSF56300 23 263 3.96E-26 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 Pfam PF00149 Calcineurin-like phosphoesterase 22 230 3.9E-7 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 24 251 1.2E-71 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 272 98.849 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 PANTHER PTHR34990 8 269 5.9E-71 T 22-04-2016 RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 Gene3D G3DSA:3.60.21.10 204 246 1.4E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS04965 c9bbb3c3f73354ef0068e017957458a1 272 Gene3D G3DSA:3.60.21.10 23 147 1.4E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS16495 7601ae1d72c6714ae27574c0db412b28 277 PANTHER PTHR32243:SF18 3 277 2.2E-88 T 22-04-2016 RPIC_RS16495 7601ae1d72c6714ae27574c0db412b28 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 268 6.1E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS16495 7601ae1d72c6714ae27574c0db412b28 277 SUPERFAMILY SSF161098 9 276 3.18E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS16495 7601ae1d72c6714ae27574c0db412b28 277 PANTHER PTHR32243 3 277 2.2E-88 T 22-04-2016 RPIC_RS16495 7601ae1d72c6714ae27574c0db412b28 277 Gene3D G3DSA:1.10.3720.10 2 264 6.9E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS19285 425f15f5a1ed9bde99d1892f399832ff 151 SUPERFAMILY SSF54427 66 151 3.68E-25 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS19285 425f15f5a1ed9bde99d1892f399832ff 151 Gene3D G3DSA:3.10.450.50 46 151 8.9E-37 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS05920 729106cd9865e7179c9544cf9701dde0 154 PIRSF PIRSF000239 1 154 2.1E-27 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RPIC_RS05920 729106cd9865e7179c9544cf9701dde0 154 Pfam PF00578 AhpC/TSA family 7 132 7.7E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS05920 729106cd9865e7179c9544cf9701dde0 154 PANTHER PTHR10681 7 154 6.3E-39 T 22-04-2016 RPIC_RS05920 729106cd9865e7179c9544cf9701dde0 154 SUPERFAMILY SSF52833 3 154 1.02E-48 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS05920 729106cd9865e7179c9544cf9701dde0 154 Gene3D G3DSA:3.40.30.10 2 154 5.9E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08720 0c336beb5c94c9a471b9e9a27daaadce 332 Pfam PF05275 Copper resistance protein B precursor (CopB) 126 332 2.9E-86 T 22-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 RPIC_RS10205 4c6e199128c9d8cd321a14c4a75e94c9 284 Pfam PF15916 Domain of unknown function (DUF4743) 18 121 1.7E-26 T 22-04-2016 IPR031804 Domain of unknown function DUF4743 RPIC_RS10205 4c6e199128c9d8cd321a14c4a75e94c9 284 Gene3D G3DSA:3.90.79.10 89 268 1.7E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS10205 4c6e199128c9d8cd321a14c4a75e94c9 284 PANTHER PTHR13622 64 234 5.1E-36 T 22-04-2016 RPIC_RS10205 4c6e199128c9d8cd321a14c4a75e94c9 284 PANTHER PTHR13622:SF8 64 234 5.1E-36 T 22-04-2016 RPIC_RS10205 4c6e199128c9d8cd321a14c4a75e94c9 284 SUPERFAMILY SSF55811 97 263 2.57E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 RPIC_RS10205 4c6e199128c9d8cd321a14c4a75e94c9 284 Pfam PF00293 NUDIX domain 137 235 3.9E-6 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 RPIC_RS00590 dc0c7a977c11d1348a7fe4a30e096cd2 201 Gene3D G3DSA:3.40.30.10 2 197 2.4E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00590 dc0c7a977c11d1348a7fe4a30e096cd2 201 PIRSF PIRSF006386 1 200 1.3E-60 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa RPIC_RS00590 dc0c7a977c11d1348a7fe4a30e096cd2 201 SUPERFAMILY SSF52833 4 198 1.25E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS00590 dc0c7a977c11d1348a7fe4a30e096cd2 201 Pfam PF01323 DSBA-like thioredoxin domain 5 196 1.1E-37 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 RPIC_RS00590 dc0c7a977c11d1348a7fe4a30e096cd2 201 PANTHER PTHR13887 4 196 3.8E-41 T 22-04-2016 RPIC_RS21625 b3921b16f64242082995b9c9c357506e 214 Pfam PF00535 Glycosyl transferase family 2 89 203 1.8E-20 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS21625 b3921b16f64242082995b9c9c357506e 214 PANTHER PTHR22916 74 214 8.5E-34 T 22-04-2016 RPIC_RS21625 b3921b16f64242082995b9c9c357506e 214 Gene3D G3DSA:3.90.550.10 85 214 3.5E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS21625 b3921b16f64242082995b9c9c357506e 214 SUPERFAMILY SSF53448 86 214 8.72E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS21625 b3921b16f64242082995b9c9c357506e 214 PANTHER PTHR22916:SF17 74 214 8.5E-34 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 PANTHER PTHR23355 430 586 5.4E-36 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 PANTHER PTHR23355 240 414 5.4E-36 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 Pfam PF00773 RNB domain 480 523 5.1E-10 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 Pfam PF00773 RNB domain 241 476 4.4E-32 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 SUPERFAMILY SSF50249 227 574 5.71E-70 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 PANTHER PTHR23355:SF5 430 586 5.4E-36 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 PANTHER PTHR23355:SF5 240 414 5.4E-36 T 22-04-2016 RPIC_RS14890 cf4d30ed7ec3ad11387ec120029f3b4e 698 SMART SM00955 235 525 4.9E-64 T 22-04-2016 RPIC_RS06420 2c0e0e1789abf94fa2603b00beb917c8 232 SUPERFAMILY SSF53098 25 217 5.01E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS06420 2c0e0e1789abf94fa2603b00beb917c8 232 PANTHER PTHR10954 13 232 8.0E-77 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 RPIC_RS06420 2c0e0e1789abf94fa2603b00beb917c8 232 Gene3D G3DSA:3.30.420.10 27 170 1.5E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS06420 2c0e0e1789abf94fa2603b00beb917c8 232 Pfam PF01351 Ribonuclease HII 29 208 5.7E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain RPIC_RS06420 2c0e0e1789abf94fa2603b00beb917c8 232 Hamap MF_00052_B Ribonuclease HII [rnhB]. 27 209 36.287 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 RPIC_RS11440 70563777a0d8265e0a5f96b0f1f0336c 119 SUPERFAMILY SSF46785 11 77 4.59E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11440 70563777a0d8265e0a5f96b0f1f0336c 119 Gene3D G3DSA:1.10.10.10 17 65 3.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS05080 2aaac8ac280aedd3bfc3fb692b3debb1 448 PANTHER PTHR11206 2 446 1.0E-89 T 22-04-2016 RPIC_RS05080 2aaac8ac280aedd3bfc3fb692b3debb1 448 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 411 3.3E-69 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC_RS05080 2aaac8ac280aedd3bfc3fb692b3debb1 448 PANTHER PTHR11206:SF153 2 446 1.0E-89 T 22-04-2016 RPIC_RS05080 2aaac8ac280aedd3bfc3fb692b3debb1 448 Pfam PF01554 MatE 241 401 1.9E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC_RS05080 2aaac8ac280aedd3bfc3fb692b3debb1 448 Pfam PF01554 MatE 15 173 1.2E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC_RS05080 2aaac8ac280aedd3bfc3fb692b3debb1 448 PIRSF PIRSF006603 6 447 1.9E-54 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 RPIC_RS03710 84c417c5b333934dd38d947e965d1e9c 75 PANTHER PTHR33279 1 75 1.1E-21 T 22-04-2016 RPIC_RS03710 84c417c5b333934dd38d947e965d1e9c 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain RPIC_RS03710 84c417c5b333934dd38d947e965d1e9c 75 Gene3D G3DSA:3.30.110.40 1 74 8.8E-32 T 22-04-2016 IPR001455 TusA-like domain RPIC_RS03710 84c417c5b333934dd38d947e965d1e9c 75 Pfam PF01206 Sulfurtransferase TusA 5 74 7.2E-26 T 22-04-2016 IPR001455 TusA-like domain RPIC_RS03710 84c417c5b333934dd38d947e965d1e9c 75 SUPERFAMILY SSF64307 3 74 9.29E-26 T 22-04-2016 IPR001455 TusA-like domain RPIC_RS16565 a98f7a4a599f6e2624fc80404a6175b9 258 Pfam PF16357 Putative PepSY_TM-like 41 253 2.3E-14 T 22-04-2016 IPR032307 Putative PepSY TM-like protein RPIC_RS02155 20903c8834cecbd8abdd5ff351465e82 319 Pfam PF03090 Replicase family 27 155 2.3E-44 T 22-04-2016 IPR004322 Plasmid replicase, bacterial RPIC_RS02155 20903c8834cecbd8abdd5ff351465e82 319 Pfam PF08708 Primase C terminal 1 (PriCT-1) 165 236 8.3E-20 T 22-04-2016 IPR014820 Primase, C-terminal 1 RPIC_RS15050 0e0377e2630d409e3c207881c75269cc 302 PANTHER PTHR38034 31 300 1.3E-39 T 22-04-2016 RPIC_RS15050 0e0377e2630d409e3c207881c75269cc 302 Pfam PF01578 Cytochrome C assembly protein 70 298 8.5E-26 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 Pfam PF00155 Aminotransferase class I and II 29 394 8.2E-82 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 9.0E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 PANTHER PTHR11879:SF11 1 397 2.4E-235 T 22-04-2016 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 PANTHER PTHR11879 1 397 2.4E-235 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 SUPERFAMILY SSF53383 1 398 4.08E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase RPIC_RS04300 7000556ad5c20deaa8f0ede76759dd48 398 Gene3D G3DSA:3.40.640.10 47 317 1.8E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RPIC_RS15070 00ee8a48647fccc87467df4773db1615 288 PANTHER PTHR10869 96 286 2.7E-80 T 22-04-2016 RPIC_RS15070 00ee8a48647fccc87467df4773db1615 288 SMART SM00702 96 280 4.2E-48 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 RPIC_RS15070 00ee8a48647fccc87467df4773db1615 288 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 176 280 9.0E-17 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 RPIC_RS11130 66b4d7bb7dfc92d70133dcfc29d85d27 174 SUPERFAMILY SSF158694 7 171 3.27E-56 T 22-04-2016 RPIC_RS11130 66b4d7bb7dfc92d70133dcfc29d85d27 174 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 14 170 3.0E-64 T 22-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RPIC_RS11130 66b4d7bb7dfc92d70133dcfc29d85d27 174 Gene3D G3DSA:1.10.3330.10 14 172 3.0E-62 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RPIC_RS11130 66b4d7bb7dfc92d70133dcfc29d85d27 174 Pfam PF09349 OHCU decarboxylase 12 168 5.7E-48 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 RPIC_RS06105 cc9774d08a9c0683f46dde1c8ee43982 165 PANTHER PTHR33254 1 164 4.8E-72 T 22-04-2016 RPIC_RS06105 cc9774d08a9c0683f46dde1c8ee43982 165 PANTHER PTHR33254:SF4 1 164 4.8E-72 T 22-04-2016 RPIC_RS06105 cc9774d08a9c0683f46dde1c8ee43982 165 Gene3D G3DSA:3.50.30.40 5 162 4.3E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RPIC_RS06105 cc9774d08a9c0683f46dde1c8ee43982 165 SUPERFAMILY SSF89562 5 161 7.06E-44 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RPIC_RS06105 cc9774d08a9c0683f46dde1c8ee43982 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 6 160 2.6E-65 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 RPIC_RS06105 cc9774d08a9c0683f46dde1c8ee43982 165 Pfam PF03737 Demethylmenaquinone methyltransferase 7 159 1.7E-41 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RPIC_RS13070 a311bc3d3b3234749c7dc58008f4b9e9 81 Pfam PF10038 Protein of unknown function (DUF2274) 5 69 2.5E-26 T 22-04-2016 IPR018733 Protein of unknown function DUF2274 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 SUPERFAMILY SSF56235 10 542 1.43E-175 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 Pfam PF01019 Gamma-glutamyltranspeptidase 37 537 4.8E-156 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PANTHER PTHR11686:SF8 1 542 2.2E-229 T 22-04-2016 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 437 454 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 44 69 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 137 156 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 400 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 283 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 235 251 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 413 428 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 119 137 1.1E-39 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS13625 b984addb9f70403ddd3ddfa829afdd85 542 PANTHER PTHR11686 1 542 2.2E-229 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 PANTHER PTHR12045 9 335 8.4E-138 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 PIRSF PIRSF016516 1 336 1.1E-149 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 SUPERFAMILY SSF49785 179 334 3.53E-55 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 Pfam PF03561 Allantoicase repeat 193 333 9.7E-47 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 Pfam PF03561 Allantoicase repeat 26 170 9.0E-47 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 Hamap MF_00813 Probable allantoicase [alc]. 6 336 57.666 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 TIGRFAM TIGR02961 allantoicase: allantoicase 17 333 1.2E-139 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 SUPERFAMILY SSF49785 12 173 3.36E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 Gene3D G3DSA:2.60.120.260 174 334 8.0E-57 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC_RS17200 f9ee6d977e6ac534336cdd78a60a9b39 336 Gene3D G3DSA:2.60.120.260 11 172 2.6E-61 T 22-04-2016 IPR008979 Galactose-binding domain-like RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 Gene3D G3DSA:3.40.720.10 37 485 5.2E-147 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 PRINTS PR00113 Alkaline phosphatase signature 155 175 2.6E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 PRINTS PR00113 Alkaline phosphatase signature 286 315 2.6E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 PRINTS PR00113 Alkaline phosphatase signature 45 65 2.6E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 PRINTS PR00113 Alkaline phosphatase signature 209 219 2.6E-40 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 SUPERFAMILY SSF53649 41 485 6.15E-128 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 Pfam PF00245 Alkaline phosphatase 45 484 1.4E-105 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 SMART SM00098 46 484 2.2E-89 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 PANTHER PTHR11596 42 386 3.3E-146 T 22-04-2016 RPIC_RS18120 e33b224619af943da89ad0ea7a73a25a 485 PANTHER PTHR11596 405 485 3.3E-146 T 22-04-2016 RPIC_RS14125 00a8e76c19b5b640e6aaca3220574e20 232 Pfam PF00005 ABC transporter 29 171 6.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS14125 00a8e76c19b5b640e6aaca3220574e20 232 SMART SM00382 33 225 4.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS14125 00a8e76c19b5b640e6aaca3220574e20 232 PANTHER PTHR24220 10 205 2.0E-48 T 22-04-2016 RPIC_RS14125 00a8e76c19b5b640e6aaca3220574e20 232 Gene3D G3DSA:3.40.50.300 6 205 1.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14125 00a8e76c19b5b640e6aaca3220574e20 232 SUPERFAMILY SSF52540 6 206 2.27E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS15905 077656fa8458ae8ec36dd4e1cafefa8b 140 PANTHER PTHR21256 3 132 1.7E-60 T 22-04-2016 RPIC_RS15905 077656fa8458ae8ec36dd4e1cafefa8b 140 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 1.5E-35 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RPIC_RS15905 077656fa8458ae8ec36dd4e1cafefa8b 140 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 107 4.0E-25 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RPIC_RS15905 077656fa8458ae8ec36dd4e1cafefa8b 140 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 32.197 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 RPIC_RS15905 077656fa8458ae8ec36dd4e1cafefa8b 140 SUPERFAMILY SSF141734 4 111 2.22E-47 T 22-04-2016 RPIC_RS15015 1d0b58475dd0f3ab6f7e430509de4a67 676 Gene3D G3DSA:2.60.120.200 439 665 1.0E-7 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RPIC_RS15015 1d0b58475dd0f3ab6f7e430509de4a67 676 SUPERFAMILY SSF53649 46 308 4.22E-21 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RPIC_RS15015 1d0b58475dd0f3ab6f7e430509de4a67 676 SUPERFAMILY SSF49899 432 664 6.9E-13 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain RPIC_RS15015 1d0b58475dd0f3ab6f7e430509de4a67 676 Gene3D G3DSA:3.40.720.10 53 330 4.2E-17 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RPIC_RS15015 1d0b58475dd0f3ab6f7e430509de4a67 676 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 55 139 3.7E-5 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 SUPERFAMILY SSF52283 2 135 3.97E-32 T 22-04-2016 RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 PANTHER PTHR10996 1 309 4.6E-117 T 22-04-2016 RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 Gene3D G3DSA:3.40.50.720 2 114 3.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 287 6.4E-58 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 Gene3D G3DSA:3.40.50.720 115 290 1.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 SUPERFAMILY SSF51735 101 288 1.15E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 310 5.5E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RPIC_RS04420 2e8d8c1c24bbf67519fe03a124372b30 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 Gene3D G3DSA:1.10.10.10 153 225 7.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 Gene3D G3DSA:2.60.120.10 36 148 2.0E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 SUPERFAMILY SSF51206 13 146 2.49E-19 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 Pfam PF00027 Cyclic nucleotide-binding domain 37 123 7.1E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 PANTHER PTHR24567:SF30 12 225 3.4E-32 T 22-04-2016 RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 SUPERFAMILY SSF46785 153 225 1.92E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 Pfam PF13545 Crp-like helix-turn-helix domain 156 225 1.7E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 SMART SM00419 172 220 3.6E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RPIC_RS00100 aace494be11ae9be0bc89b8b679cb09c 232 PANTHER PTHR24567 12 225 3.4E-32 T 22-04-2016 RPIC_RS02085 1b56eabfe0cb11d9524224e1a5000092 110 Pfam PF07883 Cupin domain 53 110 2.1E-11 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS02085 1b56eabfe0cb11d9524224e1a5000092 110 SUPERFAMILY SSF51182 14 108 2.57E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS02085 1b56eabfe0cb11d9524224e1a5000092 110 Gene3D G3DSA:2.60.120.10 16 107 2.9E-15 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS15580 988d21b37a6581ea0613a2734873e07a 162 Gene3D G3DSA:3.90.960.10 10 145 8.4E-28 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS15580 988d21b37a6581ea0613a2734873e07a 162 SUPERFAMILY SSF55826 10 146 7.72E-34 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS15580 988d21b37a6581ea0613a2734873e07a 162 Pfam PF04073 Aminoacyl-tRNA editing domain 23 142 4.8E-28 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 285 1.6E-88 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 SUPERFAMILY SSF54713 149 285 6.79E-48 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 SUPERFAMILY SSF54713 56 145 5.01E-25 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Gene3D G3DSA:1.10.8.10 3 55 3.2E-21 T 22-04-2016 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 PANTHER PTHR11741 1 288 8.5E-118 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 285 78.79 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Gene3D G3DSA:1.10.286.20 188 231 6.1E-20 T 22-04-2016 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Gene3D G3DSA:3.30.479.20 57 145 7.6E-20 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Gene3D G3DSA:3.30.479.20 232 267 4.4E-24 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Gene3D G3DSA:3.30.479.20 149 183 4.4E-24 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 SUPERFAMILY SSF46934 3 56 4.08E-13 T 22-04-2016 IPR009060 UBA-like GO:0005515 RPIC_RS06355 9c0ebd83d4966d37cb10bc5833f82d7f 292 Pfam PF00889 Elongation factor TS 71 268 3.0E-69 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 Pfam PF00072 Response regulator receiver domain 15 125 8.6E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 PANTHER PTHR26402:SF596 13 144 1.8E-16 T 22-04-2016 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 PANTHER PTHR26402:SF596 200 216 1.8E-16 T 22-04-2016 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 Gene3D G3DSA:3.40.50.2300 13 142 6.4E-22 T 22-04-2016 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 SUPERFAMILY SSF52172 11 153 6.97E-24 T 22-04-2016 IPR011006 CheY-like superfamily RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 SMART SM00448 13 126 8.2E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 PANTHER PTHR26402 13 144 1.8E-16 T 22-04-2016 RPIC_RS14660 9651c77f1996957f8e026c4b755a0d6f 339 PANTHER PTHR26402 200 216 1.8E-16 T 22-04-2016 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 SUPERFAMILY SSF103088 91 211 4.19E-32 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01021 OMPA domain signature 103 125 7.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01021 OMPA domain signature 148 164 7.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01021 OMPA domain signature 133 148 7.8E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PANTHER PTHR30128:SF16 73 218 1.7E-27 T 22-04-2016 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 Pfam PF00691 OmpA family 102 186 1.4E-18 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 Gene3D G3DSA:3.30.1330.60 91 212 6.5E-36 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PANTHER PTHR30128 73 218 1.7E-27 T 22-04-2016 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01022 Outer membrane protein A signature 190 203 8.3E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01022 Outer membrane protein A signature 91 106 8.3E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RPIC_RS03770 c931cd05a67cc3e0b97c5c31507fce53 218 PRINTS PR01022 Outer membrane protein A signature 157 176 8.3E-5 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 RPIC_RS11720 74100976aa613dc5e092f0b53a9f2b42 385 SUPERFAMILY SSF53822 211 299 3.24E-5 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS11720 74100976aa613dc5e092f0b53a9f2b42 385 Gene3D G3DSA:3.40.50.2300 212 284 3.3E-5 T 22-04-2016 RPIC_RS11720 74100976aa613dc5e092f0b53a9f2b42 385 PANTHER PTHR34296 2 376 8.8E-127 T 22-04-2016 RPIC_RS11720 74100976aa613dc5e092f0b53a9f2b42 385 PANTHER PTHR34296:SF1 2 376 8.8E-127 T 22-04-2016 RPIC_RS11720 74100976aa613dc5e092f0b53a9f2b42 385 Gene3D G3DSA:3.40.50.2300 51 191 7.4E-47 T 22-04-2016 RPIC_RS11720 74100976aa613dc5e092f0b53a9f2b42 385 Pfam PF02608 Basic membrane protein 55 340 1.5E-66 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 RPIC_RS02140 f8ca7a3701687a5f14d19e7eff70e976 536 Gene3D G3DSA:1.10.443.10 350 502 8.2E-13 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS02140 f8ca7a3701687a5f14d19e7eff70e976 536 Gene3D G3DSA:1.10.150.130 218 306 2.0E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS02140 f8ca7a3701687a5f14d19e7eff70e976 536 SUPERFAMILY SSF56349 212 502 4.12E-31 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS18630 750e172252b116194ccbca382557c303 554 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 24.904 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 Pfam PF14849 YidC periplasmic domain 85 353 1.6E-79 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal RPIC_RS18630 750e172252b116194ccbca382557c303 554 PANTHER PTHR12428 180 542 9.3E-105 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR01900 YidC translocation/secretion protein signature 478 493 4.6E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR01900 YidC translocation/secretion protein signature 349 365 4.6E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 4.6E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PANTHER PTHR12428:SF14 180 542 9.3E-105 T 22-04-2016 RPIC_RS18630 750e172252b116194ccbca382557c303 554 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 363 542 2.1E-74 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 425 448 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 334 354 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 173 193 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 226 244 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 472 494 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 90 111 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 508 531 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 PRINTS PR00701 60kDa inner membrane protein signature 261 276 1.6E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS18630 750e172252b116194ccbca382557c303 554 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 362 1.0E-107 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal RPIC_RS18630 750e172252b116194ccbca382557c303 554 Pfam PF02096 60Kd inner membrane protein 364 542 1.0E-63 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 101 111 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 188 200 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 57 68 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 319 336 1.3E-8 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 Pfam PF13609 Gram-negative porin 7 343 3.2E-52 T 22-04-2016 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 SUPERFAMILY SSF56935 21 386 1.25E-84 T 22-04-2016 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00184 Neisseria sp. porin signature 316 340 3.1E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00184 Neisseria sp. porin signature 189 206 3.1E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 PRINTS PR00184 Neisseria sp. porin signature 59 84 3.1E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS16885 f7cc2266b09aaafe3a336c4504a98768 386 Gene3D G3DSA:2.40.160.10 21 386 1.9E-96 T 22-04-2016 IPR023614 Porin domain RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 PANTHER PTHR11236:SF18 130 489 1.2E-135 T 22-04-2016 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 Gene3D G3DSA:3.30.470.10 407 479 1.4E-10 T 22-04-2016 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 Gene3D G3DSA:3.60.120.10 122 406 1.3E-115 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 Pfam PF01063 Amino-transferase class IV 413 621 1.1E-44 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 SUPERFAMILY SSF56752 352 621 3.53E-56 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 PRINTS PR00095 Anthranilate synthase component I signature 236 249 2.8E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 PRINTS PR00095 Anthranilate synthase component I signature 250 263 2.8E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 PRINTS PR00095 Anthranilate synthase component I signature 330 344 2.8E-10 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 Gene3D G3DSA:3.20.10.10 492 620 2.7E-28 T 22-04-2016 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 PANTHER PTHR11236 130 489 1.2E-135 T 22-04-2016 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 SUPERFAMILY SSF56322 119 405 1.44E-95 T 22-04-2016 IPR005801 ADC synthase GO:0009058 RPIC_RS14130 6493e94590b08763a88dc494c5b22f84 632 Pfam PF00425 chorismate binding enzyme 134 400 6.1E-81 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 360 3.6E-109 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 Gene3D G3DSA:3.40.140.10 6 134 5.1E-35 T 22-04-2016 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 Pfam PF01872 RibD C-terminal domain 153 341 2.9E-46 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 Gene3D G3DSA:3.40.430.10 135 366 1.1E-73 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 363 6.2E-54 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 PANTHER PTHR11079 241 263 1.3E-60 T 22-04-2016 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 PANTHER PTHR11079 1 218 1.3E-60 T 22-04-2016 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 SUPERFAMILY SSF53597 151 365 2.62E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 PIRSF PIRSF006769 1 367 3.4E-121 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 PANTHER PTHR11079:SF10 241 263 1.3E-60 T 22-04-2016 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 PANTHER PTHR11079:SF10 1 218 1.3E-60 T 22-04-2016 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 105 5.8E-21 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 RPIC_RS03245 9a037222f1cf365dbc16486b81f39d84 370 SUPERFAMILY SSF53927 6 150 1.68E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 RPIC_RS09480 55c1ce284fc73855206d672fd603df6f 248 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 248 95.089 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RPIC_RS09480 55c1ce284fc73855206d672fd603df6f 248 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 210 1.9E-68 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RPIC_RS09480 55c1ce284fc73855206d672fd603df6f 248 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 223 1.1E-53 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 RPIC_RS09480 55c1ce284fc73855206d672fd603df6f 248 SUPERFAMILY SSF55729 2 231 1.38E-81 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS09480 55c1ce284fc73855206d672fd603df6f 248 PANTHER PTHR30098 23 248 2.9E-60 T 22-04-2016 RPIC_RS06760 ffe01df51ea5f244527bfe2c4f62f65d 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 2.0E-24 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC_RS06760 ffe01df51ea5f244527bfe2c4f62f65d 96 PIRSF PIRSF001486 1 94 9.3E-50 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC_RS06760 ffe01df51ea5f244527bfe2c4f62f65d 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 5.1E-49 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC_RS06760 ffe01df51ea5f244527bfe2c4f62f65d 96 SUPERFAMILY SSF54909 1 95 3.75E-41 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS06760 ffe01df51ea5f244527bfe2c4f62f65d 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 2.9E-43 T 22-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 RPIC_RS12885 574baad85435600c6ec55186a18bd536 78 Gene3D G3DSA:1.10.260.40 1 58 9.0E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS12885 574baad85435600c6ec55186a18bd536 78 SUPERFAMILY SSF47413 1 47 9.38E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RPIC_RS18220 38084e6d5be67ddd5a8579aa09ef8bd9 256 Pfam PF14334 Domain of unknown function (DUF4390) 42 198 3.7E-60 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 RPIC_RS00395 b0054be8747af223273a873d2b7b330c 326 PANTHER PTHR12715 20 324 1.0E-70 T 22-04-2016 RPIC_RS00395 b0054be8747af223273a873d2b7b330c 326 PANTHER PTHR12715:SF21 20 324 1.0E-70 T 22-04-2016 RPIC_RS00395 b0054be8747af223273a873d2b7b330c 326 SUPERFAMILY SSF103481 228 324 4.05E-5 T 22-04-2016 RPIC_RS00395 b0054be8747af223273a873d2b7b330c 326 Pfam PF00892 EamA-like transporter family 25 159 2.9E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS00395 b0054be8747af223273a873d2b7b330c 326 SUPERFAMILY SSF103481 67 160 6.54E-8 T 22-04-2016 RPIC_RS07610 dba3263988cf05a2107060e0889af5ce 166 SUPERFAMILY SSF54523 32 163 3.77E-10 T 22-04-2016 RPIC_RS07610 dba3263988cf05a2107060e0889af5ce 166 Pfam PF08805 PilS N terminal 57 165 3.6E-5 T 22-04-2016 IPR014911 Type 4 secretion system, PilS, N-terminal RPIC_RS05940 a01a73513f1b8be1be1825f3c4cdcf25 331 Gene3D G3DSA:3.90.550.10 2 144 1.6E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS05940 a01a73513f1b8be1be1825f3c4cdcf25 331 PANTHER PTHR10859 4 312 9.5E-115 T 22-04-2016 RPIC_RS05940 a01a73513f1b8be1be1825f3c4cdcf25 331 PANTHER PTHR10859:SF49 4 312 9.5E-115 T 22-04-2016 RPIC_RS05940 a01a73513f1b8be1be1825f3c4cdcf25 331 Pfam PF00535 Glycosyl transferase family 2 7 166 4.8E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS05940 a01a73513f1b8be1be1825f3c4cdcf25 331 SUPERFAMILY SSF53448 2 255 6.88E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS20390 89af7f8ddf1026cda804cc6e39337e36 90 SUPERFAMILY SSF82544 2 89 2.48E-20 T 22-04-2016 RPIC_RS20390 89af7f8ddf1026cda804cc6e39337e36 90 Gene3D G3DSA:3.40.1480.10 2 89 8.0E-24 T 22-04-2016 IPR007835 MOFRL domain RPIC_RS15595 95cb1c3619c463b8fc12dd3d8aaa2e30 122 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 32 105 1.9E-17 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RPIC_RS15595 95cb1c3619c463b8fc12dd3d8aaa2e30 122 PANTHER PTHR36835 13 122 3.6E-37 T 22-04-2016 RPIC_RS15595 95cb1c3619c463b8fc12dd3d8aaa2e30 122 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 26 120 5.6E-38 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 PANTHER PTHR13789:SF202 5 359 1.3E-41 T 22-04-2016 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 Pfam PF01494 FAD binding domain 9 335 7.1E-18 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 4.7E-11 T 22-04-2016 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 4.7E-11 T 22-04-2016 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.7E-11 T 22-04-2016 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.7E-11 T 22-04-2016 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 Gene3D G3DSA:3.50.50.60 9 172 1.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 Gene3D G3DSA:3.50.50.60 268 345 1.4E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 SUPERFAMILY SSF51905 265 366 4.03E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 SUPERFAMILY SSF51905 8 167 4.03E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS02095 2ef70819496af71861543f535ac3250f 402 PANTHER PTHR13789 5 359 1.3E-41 T 22-04-2016 RPIC_RS06085 c511636a5229d48c676c8958e7c4e713 103 Pfam PF13239 2TM domain 21 77 9.9E-15 T 22-04-2016 IPR025698 2TM domain RPIC_RS08530 0057a866b051e6d16bfd8d399983c862 345 Pfam PF11740 Plasmid replication region DNA-binding N-term 34 146 6.8E-21 T 22-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain RPIC_RS05655 e03ed0402a0dd7d1c26cc61d15a2a3c7 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05655 e03ed0402a0dd7d1c26cc61d15a2a3c7 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 7.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05655 e03ed0402a0dd7d1c26cc61d15a2a3c7 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 7.7E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05655 e03ed0402a0dd7d1c26cc61d15a2a3c7 263 Gene3D G3DSA:3.40.50.720 17 246 4.9E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05655 e03ed0402a0dd7d1c26cc61d15a2a3c7 263 Pfam PF00106 short chain dehydrogenase 20 194 1.4E-16 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR RPIC_RS05655 e03ed0402a0dd7d1c26cc61d15a2a3c7 263 SUPERFAMILY SSF51735 15 254 8.92E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS14155 cbd09353868d445a5207e0e75661bfa1 141 SUPERFAMILY SSF52833 15 133 1.48E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14155 cbd09353868d445a5207e0e75661bfa1 141 Gene3D G3DSA:3.40.30.10 28 129 2.4E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14155 cbd09353868d445a5207e0e75661bfa1 141 Pfam PF00085 Thioredoxin 29 128 4.6E-7 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC_RS23975 43fff2a1a39a65ea63303e471d338c3c 81 PANTHER PTHR23501 2 81 3.7E-34 T 22-04-2016 RPIC_RS23975 43fff2a1a39a65ea63303e471d338c3c 81 SUPERFAMILY SSF103473 9 80 2.62E-10 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS23975 43fff2a1a39a65ea63303e471d338c3c 81 PANTHER PTHR23501:SF52 2 81 3.7E-34 T 22-04-2016 RPIC_RS23975 43fff2a1a39a65ea63303e471d338c3c 81 Gene3D G3DSA:1.20.1250.20 18 80 3.2E-7 T 22-04-2016 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 Gene3D G3DSA:1.20.5.1030 64 121 1.4E-23 T 22-04-2016 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 PANTHER PTHR33910 1 126 3.4E-17 T 22-04-2016 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 122 9.2E-19 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 4.69E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 4.69E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 4.69E-13 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 120 11.453 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 PANTHER PTHR33910:SF1 1 126 3.4E-17 T 22-04-2016 RPIC_RS16395 0b5a72fa5bd30b5e4f10d6386d03196e 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 119 1.5E-19 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 PANTHER PTHR30344 195 477 2.2E-27 T 22-04-2016 RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 Pfam PF10282 Lactonase, 7-bladed beta-propeller 184 272 2.3E-11 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 Pfam PF10282 Lactonase, 7-bladed beta-propeller 368 504 7.0E-21 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 SUPERFAMILY SSF51004 182 500 1.96E-46 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 PANTHER PTHR30344:SF1 195 477 2.2E-27 T 22-04-2016 RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 Gene3D G3DSA:2.130.10.10 275 519 2.0E-41 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS00110 62acdfc961cf7495889e3364ac17783a 522 Gene3D G3DSA:2.130.10.10 178 274 7.8E-16 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RPIC_RS11550 a7e2990c8698ae9d40fef93340d3742e 92 Pfam PF13619 KTSC domain 15 75 1.1E-22 T 22-04-2016 IPR025309 KTSC domain RPIC_RS10785 3f8e072202bb3e41177c22563096d45f 159 SUPERFAMILY SSF54637 5 155 1.14E-37 T 22-04-2016 IPR029069 HotDog domain RPIC_RS10785 3f8e072202bb3e41177c22563096d45f 159 Gene3D G3DSA:3.10.129.10 7 154 1.6E-35 T 22-04-2016 IPR029069 HotDog domain RPIC_RS10785 3f8e072202bb3e41177c22563096d45f 159 PANTHER PTHR13078 3 154 3.7E-39 T 22-04-2016 RPIC_RS10785 3f8e072202bb3e41177c22563096d45f 159 Pfam PF01575 MaoC like domain 13 117 3.9E-26 T 22-04-2016 IPR002539 MaoC-like domain RPIC_RS17785 6494ef1c71afc10f8b4508d70d3b4423 268 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 43 268 3.8E-70 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC_RS17785 6494ef1c71afc10f8b4508d70d3b4423 268 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 21 268 4.4E-77 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 PANTHER PTHR11070 5 568 6.1E-90 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Gene3D G3DSA:3.40.50.300 7 248 1.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 SUPERFAMILY SSF52540 3 560 8.44E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 97 1.9E-8 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Pfam PF00580 UvrD/REP helicase N-terminal domain 148 235 1.8E-19 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Gene3D G3DSA:3.40.50.300 499 568 3.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Gene3D G3DSA:3.40.50.300 257 365 3.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Pfam PF13361 UvrD-like helicase C-terminal domain 494 558 7.8E-20 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS07475 d5cd845104d687703780b9b7843e641b 573 Pfam PF13361 UvrD-like helicase C-terminal domain 254 374 7.2E-10 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RPIC_RS02395 2dd27c979c35f7d3cb821d3c935e0538 264 Pfam PF03591 AzlC protein 36 175 8.2E-29 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease RPIC_RS02395 2dd27c979c35f7d3cb821d3c935e0538 264 PANTHER PTHR34979 6 252 4.5E-25 T 22-04-2016 RPIC_RS03325 1c95eb1024f78708b1e51ea7d4af1f74 230 TIGRFAM TIGR02796 tolQ: protein TolQ 11 227 2.4E-88 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 RPIC_RS03325 1c95eb1024f78708b1e51ea7d4af1f74 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 84 215 9.7E-43 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RPIC_RS03325 1c95eb1024f78708b1e51ea7d4af1f74 230 PANTHER PTHR30625:SF3 8 228 4.0E-68 T 22-04-2016 RPIC_RS03325 1c95eb1024f78708b1e51ea7d4af1f74 230 PANTHER PTHR30625 8 228 4.0E-68 T 22-04-2016 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 SUPERFAMILY SSF53187 3 186 3.93E-60 T 22-04-2016 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 SUPERFAMILY SSF53187 300 381 3.93E-60 T 22-04-2016 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 PANTHER PTHR11014 2 383 2.7E-82 T 22-04-2016 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 383 51.285 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 Pfam PF07687 Peptidase dimerisation domain 183 290 2.2E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 381 5.7E-158 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 Gene3D G3DSA:3.40.630.10 4 195 3.2E-71 T 22-04-2016 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 Gene3D G3DSA:3.40.630.10 324 381 3.2E-71 T 22-04-2016 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 Pfam PF01546 Peptidase family M20/M25/M40 71 379 8.2E-44 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 SUPERFAMILY SSF55031 187 296 1.79E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS06275 321c7a91e982c59c3b573e6ad08c4454 383 Gene3D G3DSA:3.30.70.360 196 296 1.6E-36 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 29 35 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 Gene3D G3DSA:3.40.50.150 9 258 5.6E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 SUPERFAMILY SSF53335 9 249 2.36E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 229 249 2.1E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 187 204 2.1E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 206 224 2.1E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 25 39 2.1E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 60 80 2.1E-31 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PANTHER PTHR13370 9 271 3.1E-42 T 22-04-2016 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 Pfam PF01555 DNA methylase 26 245 1.9E-51 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 RPIC_RS10505 c6be81dfafab8e13d2f49de9930487ee 273 PANTHER PTHR13370:SF8 9 271 3.1E-42 T 22-04-2016 RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 Gene3D G3DSA:3.40.50.300 11 205 7.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 29 1.0E-10 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 SUPERFAMILY SSF52540 16 205 3.19E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 PIRSF PIRSF015617 10 206 1.9E-67 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 PANTHER PTHR30069 13 206 1.1E-59 T 22-04-2016 RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 34 205 3.0E-64 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS13120 c16fbe2104e98eacaf4a494616ce54c1 206 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 36 205 7.4E-56 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS02400 a782f19926187ee47d286cd20e8194bd 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 1.4E-28 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RPIC_RS11995 abae9bd3270f28c3c9f4b37cca228af0 292 SUPERFAMILY SSF53474 52 289 2.38E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS11995 abae9bd3270f28c3c9f4b37cca228af0 292 Pfam PF01738 Dienelactone hydrolase family 63 289 2.8E-59 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RPIC_RS11995 abae9bd3270f28c3c9f4b37cca228af0 292 PANTHER PTHR17630 47 289 2.3E-85 T 22-04-2016 RPIC_RS11995 abae9bd3270f28c3c9f4b37cca228af0 292 PANTHER PTHR17630:SF42 47 289 2.3E-85 T 22-04-2016 RPIC_RS11995 abae9bd3270f28c3c9f4b37cca228af0 292 Gene3D G3DSA:3.40.50.1820 51 289 2.2E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS14970 82a0f71010aa3183d5418787da321391 269 Pfam PF15984 Bacterial collagen, middle region 25 177 6.8E-18 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain RPIC_RS01295 7814c0ccadfa025c5a388822ed8a604c 195 Gene3D G3DSA:2.60.450.10 26 176 1.2E-33 T 22-04-2016 RPIC_RS01295 7814c0ccadfa025c5a388822ed8a604c 195 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 25 179 3.3E-35 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RPIC_RS01295 7814c0ccadfa025c5a388822ed8a604c 195 Pfam PF03968 OstA-like protein 36 154 1.7E-27 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal RPIC_RS01295 7814c0ccadfa025c5a388822ed8a604c 195 PANTHER PTHR36504 1 195 1.0E-15 T 22-04-2016 RPIC_RS01295 7814c0ccadfa025c5a388822ed8a604c 195 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 5 180 25.255 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 SMART SM00331 7 243 3.5E-14 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 SMART SM00332 1 241 3.2E-10 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 Gene3D G3DSA:3.60.40.10 2 241 9.0E-54 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 PANTHER PTHR13832:SF278 12 263 2.8E-32 T 22-04-2016 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 PANTHER PTHR13832 12 263 2.8E-32 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 SUPERFAMILY SSF81606 1 240 2.09E-49 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 RPIC_RS11230 7c915887febb0b985f8ad8b5e279f593 304 Pfam PF13672 Protein phosphatase 2C 9 204 1.4E-11 T 22-04-2016 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 5.2E-32 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 PANTHER PTHR13501 1 107 1.1E-45 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 Gene3D G3DSA:3.90.470.10 1 108 4.7E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.682 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 106 4.2E-43 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 RPIC_RS16255 51e0308cf21414c8ce4c3bb27495453d 109 SUPERFAMILY SSF54843 1 108 2.75E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RPIC_RS05380 1ca5e8696602c603345840f8e87064d4 324 Pfam PF04116 Fatty acid hydroxylase superfamily 135 279 2.4E-33 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC_RS10775 c489e42bf1c9b47fbf451a626c4ce212 543 PANTHER PTHR11795 244 542 1.9E-150 T 22-04-2016 RPIC_RS10775 c489e42bf1c9b47fbf451a626c4ce212 543 PANTHER PTHR11795:SF349 244 542 1.9E-150 T 22-04-2016 RPIC_RS10775 c489e42bf1c9b47fbf451a626c4ce212 543 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 248 539 1.5E-128 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type RPIC_RS10775 c489e42bf1c9b47fbf451a626c4ce212 543 Pfam PF02653 Branched-chain amino acid transport system / permease component 249 525 1.9E-53 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS14940 23c9e8e025b6c99496a6bfa2014d711e 379 Pfam PF11906 Protein of unknown function (DUF3426) 229 375 1.1E-39 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 RPIC_RS21305 6fd613b9e2dfb4533771a5e7e93b1538 277 Pfam PF07005 Putative sugar-binding N-terminal domain 9 88 1.4E-12 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain RPIC_RS21305 6fd613b9e2dfb4533771a5e7e93b1538 277 PANTHER PTHR30304:SF3 10 276 4.4E-14 T 22-04-2016 RPIC_RS21305 6fd613b9e2dfb4533771a5e7e93b1538 277 PANTHER PTHR30304 10 276 4.4E-14 T 22-04-2016 RPIC_RS21305 6fd613b9e2dfb4533771a5e7e93b1538 277 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 114 264 2.3E-20 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain RPIC_RS21305 6fd613b9e2dfb4533771a5e7e93b1538 277 SUPERFAMILY SSF142764 9 272 4.97E-46 T 22-04-2016 RPIC_RS00345 9f5f7b4080cf1070305900474c0c63c1 117 Gene3D G3DSA:3.10.180.10 1 115 8.9E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS00345 9f5f7b4080cf1070305900474c0c63c1 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 112 1.4E-8 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS00345 9f5f7b4080cf1070305900474c0c63c1 117 SUPERFAMILY SSF54593 5 114 3.36E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS04600 40eb57d9332896e5c4286777ff9d9dd3 397 PIRSF PIRSF015557 2 397 5.7E-164 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RPIC_RS04600 40eb57d9332896e5c4286777ff9d9dd3 397 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 7 393 4.1E-151 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RPIC_RS04600 40eb57d9332896e5c4286777ff9d9dd3 397 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 7 393 2.5E-152 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 Gene3D G3DSA:1.20.210.10 11 471 9.1E-74 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 PANTHER PTHR10422 8 467 7.8E-294 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 12 477 7.6E-236 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 PANTHER PTHR10422:SF21 8 467 7.8E-294 T 22-04-2016 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 16 446 4.1E-120 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 SUPERFAMILY SSF81442 14 471 8.9E-128 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS05490 57b4254852986b6790884999448fdfb3 485 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 207 262 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 PANTHER PTHR33711 7 240 1.1E-105 T 22-04-2016 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 PANTHER PTHR33711:SF1 7 240 1.1E-105 T 22-04-2016 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 19 240 4.4E-107 T 22-04-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 13 42 4.1E-15 T 22-04-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 83 111 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 Pfam PF00775 Dioxygenase 51 231 2.2E-49 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 Gene3D G3DSA:2.60.130.10 12 240 1.2E-76 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC_RS06545 502c1334352df4164ceaf6beda9f31c8 249 SUPERFAMILY SSF49482 12 241 6.28E-76 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 RPIC_RS08610 d0fc0b4d88406b4ed82c808af270ef6f 140 PANTHER PTHR30435 7 131 8.1E-32 T 22-04-2016 RPIC_RS08610 d0fc0b4d88406b4ed82c808af270ef6f 140 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 16 131 5.4E-30 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 RPIC_RS08610 d0fc0b4d88406b4ed82c808af270ef6f 140 PANTHER PTHR30435:SF12 7 131 8.1E-32 T 22-04-2016 RPIC_RS08610 d0fc0b4d88406b4ed82c808af270ef6f 140 PIRSF PIRSF002889 8 138 6.2E-34 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 RPIC_RS08610 d0fc0b4d88406b4ed82c808af270ef6f 140 Pfam PF00460 Flagella basal body rod protein 16 44 5.7E-6 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 RPIC_RS14225 ced43e9c07226aaf1794959fecbbd11e 312 Gene3D G3DSA:2.60.200.30 164 276 2.9E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC_RS14225 ced43e9c07226aaf1794959fecbbd11e 312 SUPERFAMILY SSF111331 23 304 1.06E-86 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain RPIC_RS14225 ced43e9c07226aaf1794959fecbbd11e 312 PANTHER PTHR20275 19 302 3.2E-85 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC_RS14225 ced43e9c07226aaf1794959fecbbd11e 312 Gene3D G3DSA:3.40.50.10330 19 163 1.2E-35 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC_RS14225 ced43e9c07226aaf1794959fecbbd11e 312 Hamap MF_00361 NAD kinase [nadK]. 22 302 32.306 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC_RS14225 ced43e9c07226aaf1794959fecbbd11e 312 Pfam PF01513 ATP-NAD kinase 75 285 3.2E-57 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 SUPERFAMILY SSF53850 13 274 1.03E-65 T 22-04-2016 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 SMART SM00062 41 273 1.0E-56 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 PANTHER PTHR30085:SF2 30 298 3.7E-100 T 22-04-2016 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 SMART SM00079 41 272 0.0046 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 Gene3D G3DSA:3.40.190.10 38 125 9.3E-31 T 22-04-2016 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 Gene3D G3DSA:3.40.190.10 234 275 9.3E-31 T 22-04-2016 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 2.7E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 PANTHER PTHR30085 30 298 3.7E-100 T 22-04-2016 RPIC_RS04055 21b4c494c4cabe5941a9cb4b81eaf7fd 302 Gene3D G3DSA:3.40.190.10 126 233 1.8E-27 T 22-04-2016 RPIC_RS02990 e13414ff11265adeca18235d1dfc2261 181 Pfam PF01584 CheW-like domain 37 170 1.2E-20 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS02990 e13414ff11265adeca18235d1dfc2261 181 SMART SM00260 32 168 9.5E-5 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS02990 e13414ff11265adeca18235d1dfc2261 181 SUPERFAMILY SSF50341 33 174 1.96E-21 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS06455 4492abcd479d5d763cbb2d7689ba912b 141 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 140 1.5E-9 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain RPIC_RS06455 4492abcd479d5d763cbb2d7689ba912b 141 Gene3D G3DSA:2.40.50.140 87 140 4.1E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 SUPERFAMILY SSF52540 21 324 1.68E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 Gene3D G3DSA:3.40.50.300 159 343 6.7E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 Gene3D G3DSA:3.30.450.90 27 121 3.0E-15 T 22-04-2016 RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 PANTHER PTHR30258 29 140 1.7E-66 T 22-04-2016 RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 PANTHER PTHR30258 161 349 1.7E-66 T 22-04-2016 RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 PANTHER PTHR30258:SF12 29 140 1.7E-66 T 22-04-2016 RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 PANTHER PTHR30258:SF12 161 349 1.7E-66 T 22-04-2016 RPIC_RS07545 b96710b77f522ac6f99a8bb56af0f8e7 349 Pfam PF00437 Type II/IV secretion system protein 28 322 6.7E-65 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 317 334 6.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 6.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 190 202 6.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 Pfam PF13609 Gram-negative porin 7 340 1.4E-54 T 22-04-2016 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 SUPERFAMILY SSF56935 21 392 4.58E-84 T 22-04-2016 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00184 Neisseria sp. porin signature 314 338 1.1E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00184 Neisseria sp. porin signature 65 90 1.1E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 PRINTS PR00184 Neisseria sp. porin signature 191 208 1.1E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS15280 848b487f6d744afd8da9749fb38373db 392 Gene3D G3DSA:2.40.160.10 21 392 2.2E-93 T 22-04-2016 IPR023614 Porin domain RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 SMART SM01130 16 300 1.2E-86 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 Pfam PF00701 Dihydrodipicolinate synthetase family 18 290 2.2E-46 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 149 179 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 PIRSF PIRSF001365 13 302 3.7E-71 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 16 301 41.78 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 PANTHER PTHR12128 2 295 7.1E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 SUPERFAMILY SSF51569 15 298 7.33E-77 T 22-04-2016 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 22 294 5.3E-65 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 Gene3D G3DSA:3.20.20.70 11 293 1.7E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 PANTHER PTHR12128:SF34 2 295 7.1E-72 T 22-04-2016 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 52 73 8.2E-14 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 144 161 8.2E-14 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS02965 451923a59a14de9ffb6e0e8fcbfd9f3a 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 119 135 8.2E-14 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 Gene3D G3DSA:3.20.20.210 3 358 4.7E-144 T 22-04-2016 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 SUPERFAMILY SSF51726 4 358 4.19E-111 T 22-04-2016 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 354 2.2E-132 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 356 49.863 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 354 4.0E-124 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 146 162 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 PANTHER PTHR21091:SF2 7 360 4.6E-139 T 22-04-2016 RPIC_RS17335 94578fe611b2f647e0738eecca2cc95d 367 PANTHER PTHR21091 7 360 4.6E-139 T 22-04-2016 RPIC_RS01530 b0a31c600dba02c850c1897ecb39be11 137 Pfam PF04143 Sulphur transport 43 130 1.6E-6 T 22-04-2016 IPR007272 Sulphur transport domain RPIC_RS01530 b0a31c600dba02c850c1897ecb39be11 137 PANTHER PTHR30574 3 136 1.5E-33 T 22-04-2016 RPIC_RS01530 b0a31c600dba02c850c1897ecb39be11 137 PANTHER PTHR30574:SF1 3 136 1.5E-33 T 22-04-2016 RPIC_RS06975 779a3c75bdc2bfaa6e7baa8738b0a4bb 434 Pfam PF07690 Major Facilitator Superfamily 33 383 7.8E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS06975 779a3c75bdc2bfaa6e7baa8738b0a4bb 434 PANTHER PTHR23508 26 429 5.1E-116 T 22-04-2016 RPIC_RS06975 779a3c75bdc2bfaa6e7baa8738b0a4bb 434 Gene3D G3DSA:1.20.1250.20 28 227 1.4E-21 T 22-04-2016 RPIC_RS06975 779a3c75bdc2bfaa6e7baa8738b0a4bb 434 Gene3D G3DSA:1.20.1250.20 252 425 6.3E-16 T 22-04-2016 RPIC_RS06975 779a3c75bdc2bfaa6e7baa8738b0a4bb 434 PANTHER PTHR23508:SF13 26 429 5.1E-116 T 22-04-2016 RPIC_RS06975 779a3c75bdc2bfaa6e7baa8738b0a4bb 434 SUPERFAMILY SSF103473 26 428 3.4E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS02755 7b8678d6d0f08ab2dceec53bc185bd1f 389 SUPERFAMILY SSF56796 5 386 6.54E-117 T 22-04-2016 RPIC_RS02755 7b8678d6d0f08ab2dceec53bc185bd1f 389 Gene3D G3DSA:1.20.1090.10 189 387 6.7E-66 T 22-04-2016 RPIC_RS02755 7b8678d6d0f08ab2dceec53bc185bd1f 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 380 7.4E-112 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 RPIC_RS02755 7b8678d6d0f08ab2dceec53bc185bd1f 389 Gene3D G3DSA:3.40.50.1970 5 188 1.2E-51 T 22-04-2016 RPIC_RS02755 7b8678d6d0f08ab2dceec53bc185bd1f 389 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 177 205 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RPIC_RS02755 7b8678d6d0f08ab2dceec53bc185bd1f 389 PANTHER PTHR11496 13 386 2.5E-106 T 22-04-2016 RPIC_RS10635 9b2caa21b05e8307c85e336926e3ce1a 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.397 T 22-04-2016 IPR005583 Peroxide stress protein YaaA RPIC_RS10635 9b2caa21b05e8307c85e336926e3ce1a 257 Pfam PF03883 Protein of unknown function (DUF328) 1 242 1.9E-91 T 22-04-2016 IPR005583 Peroxide stress protein YaaA RPIC_RS10635 9b2caa21b05e8307c85e336926e3ce1a 257 PANTHER PTHR30283:SF3 2 256 5.0E-109 T 22-04-2016 RPIC_RS10635 9b2caa21b05e8307c85e336926e3ce1a 257 PANTHER PTHR30283 2 256 5.0E-109 T 22-04-2016 RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 SUPERFAMILY SSF53955 55 208 7.31E-56 T 22-04-2016 IPR023346 Lysozyme-like domain RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 4 233 38.991 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 Gene3D G3DSA:1.10.3810.10 58 227 4.8E-64 T 22-04-2016 RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 PANTHER PTHR30400:SF0 1 200 3.3E-67 T 22-04-2016 RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 7 232 3.7E-104 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 PANTHER PTHR30400 1 200 3.3E-67 T 22-04-2016 RPIC_RS14875 cca971e58442a282f79d881c36e4d0f2 234 Pfam PF00912 Transglycosylase 58 227 1.4E-52 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 RPIC_RS04230 9fc6c1748eed3fc912d027ceb796d7b0 132 Gene3D G3DSA:3.10.450.50 13 124 7.0E-12 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS04230 9fc6c1748eed3fc912d027ceb796d7b0 132 Pfam PF12680 SnoaL-like domain 17 116 2.9E-13 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain RPIC_RS04230 9fc6c1748eed3fc912d027ceb796d7b0 132 SUPERFAMILY SSF54427 15 123 4.39E-32 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS00335 e7018b3c8709a09f64a796ea01111ba3 156 SUPERFAMILY SSF50346 29 155 1.51E-30 T 22-04-2016 IPR011033 PRC-barrel-like RPIC_RS00335 e7018b3c8709a09f64a796ea01111ba3 156 PANTHER PTHR36505 41 156 2.5E-47 T 22-04-2016 RPIC_RS00335 e7018b3c8709a09f64a796ea01111ba3 156 Gene3D G3DSA:2.30.30.240 43 102 1.1E-19 T 22-04-2016 RPIC_RS00335 e7018b3c8709a09f64a796ea01111ba3 156 Pfam PF05239 PRC-barrel domain 43 119 6.9E-18 T 22-04-2016 IPR027275 PRC-barrel domain RPIC_RS00335 e7018b3c8709a09f64a796ea01111ba3 156 PANTHER PTHR36505:SF1 41 156 2.5E-47 T 22-04-2016 RPIC_RS14085 63e5442128ea81787147d31476fce759 356 PANTHER PTHR21716 14 356 2.5E-54 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RPIC_RS14085 63e5442128ea81787147d31476fce759 356 Pfam PF01594 Domain of unknown function DUF20 17 341 7.2E-54 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.7E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.7E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 1.7E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.7E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.7E-20 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82714 726 816 8.11E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PANTHER PTHR32063 2 1048 0.0 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82714 192 275 8.37E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Pfam PF00873 AcrB/AcrD/AcrF family 5 1037 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82693 574 668 6.28E-6 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82693 155 191 5.23E-21 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82693 277 333 5.23E-21 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Gene3D G3DSA:3.30.70.1430 574 668 4.2E-5 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Gene3D G3DSA:1.10.3850.10 283 507 1.3E-53 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Gene3D G3DSA:1.10.3850.10 822 1039 1.7E-59 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 PANTHER PTHR32063:SF24 2 1048 0.0 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Gene3D G3DSA:3.30.70.1430 42 142 1.3E-29 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82866 299 506 3.53E-36 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Gene3D G3DSA:3.30.2090.10 192 275 1.6E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 Gene3D G3DSA:3.30.2090.10 726 816 7.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82693 42 127 2.07E-23 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 SUPERFAMILY SSF82866 815 1039 4.45E-57 T 22-04-2016 RPIC_RS08645 09d3c7ced033c97151539b274ccc7ec4 1063 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1049 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 RPIC_RS08310 8b38d587561857a4b0e8320cb35716f8 318 PANTHER PTHR30489 1 318 5.2E-37 T 22-04-2016 RPIC_RS08310 8b38d587561857a4b0e8320cb35716f8 318 Pfam PF12704 MacB-like periplasmic core domain 3 148 9.8E-9 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RPIC_RS08310 8b38d587561857a4b0e8320cb35716f8 318 Pfam PF02687 FtsX-like permease family 180 311 6.9E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 82 102 4.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 176 202 4.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 141 161 4.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 82 4.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 120 140 4.6E-44 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 65 246 9.8E-69 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 PANTHER PTHR30071 26 244 9.6E-63 T 22-04-2016 RPIC_RS14035 e702b22942c434154aab1a378d47ff74 262 Pfam PF01578 Cytochrome C assembly protein 23 204 3.9E-28 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RPIC_RS18490 42a7ff150b6f98a0fece8e4357fdc303 684 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 2.5E-34 T 22-04-2016 IPR025299 CstA, C-terminal domain RPIC_RS18490 42a7ff150b6f98a0fece8e4357fdc303 684 Pfam PF02554 Carbon starvation protein CstA 32 408 7.2E-170 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 RPIC_RS18490 42a7ff150b6f98a0fece8e4357fdc303 684 PANTHER PTHR30252:SF3 5 682 0.0 T 22-04-2016 RPIC_RS18490 42a7ff150b6f98a0fece8e4357fdc303 684 PANTHER PTHR30252 5 682 0.0 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 PANTHER PTHR24096:SF113 1 180 1.5E-250 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 PANTHER PTHR24096:SF113 196 562 1.5E-250 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 Gene3D G3DSA:3.40.50.980 35 219 1.4E-36 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 Pfam PF00501 AMP-binding enzyme 40 469 4.5E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 554 2.0E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 PANTHER PTHR24096 1 180 1.5E-250 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 PANTHER PTHR24096 196 562 1.5E-250 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 22-04-2016 IPR020845 AMP-binding, conserved site RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 Gene3D G3DSA:3.40.50.980 220 370 1.3E-26 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 SUPERFAMILY SSF56801 28 564 4.45E-131 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 Gene3D G3DSA:3.30.300.30 466 565 5.3E-26 T 22-04-2016 RPIC_RS11885 6fcb42a5a329998d749adc8632243fae 567 Gene3D G3DSA:2.30.38.10 387 459 2.6E-27 T 22-04-2016 RPIC_RS05845 8bcdba191c6c23557fa6a0ec9b5d2de4 103 SUPERFAMILY SSF51182 36 101 1.2E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS05845 8bcdba191c6c23557fa6a0ec9b5d2de4 103 Gene3D G3DSA:2.60.120.10 18 101 1.1E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 Gene3D G3DSA:3.40.190.10 90 174 5.5E-20 T 22-04-2016 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 Gene3D G3DSA:1.10.10.10 1 84 2.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 SUPERFAMILY SSF53850 88 290 1.47E-29 T 22-04-2016 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 PANTHER PTHR30346 1 292 6.9E-76 T 22-04-2016 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 SUPERFAMILY SSF46785 1 85 6.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 Pfam PF03466 LysR substrate binding domain 87 288 7.4E-33 T 22-04-2016 IPR005119 LysR, substrate-binding RPIC_RS13005 90bc244618d3790fd1604e2580713b85 304 Gene3D G3DSA:3.40.190.10 175 262 9.1E-17 T 22-04-2016 RPIC_RS02195 e7c354ea326d4784fb21a4bb808b3139 366 SUPERFAMILY SSF52540 13 61 2.35E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02195 e7c354ea326d4784fb21a4bb808b3139 366 SUPERFAMILY SSF52540 145 212 2.35E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02195 e7c354ea326d4784fb21a4bb808b3139 366 Pfam PF13166 AAA domain 136 342 5.5E-14 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC RPIC_RS02195 e7c354ea326d4784fb21a4bb808b3139 366 Gene3D G3DSA:3.40.50.300 94 223 1.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16880 ae0be48b76d7ab199ca812098e547c02 270 Pfam PF03405 Fatty acid desaturase 56 169 6.5E-6 T 22-04-2016 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 UniPathway: UPA00199 RPIC_RS16880 ae0be48b76d7ab199ca812098e547c02 270 Gene3D G3DSA:1.10.620.20 50 188 7.1E-15 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC_RS16880 ae0be48b76d7ab199ca812098e547c02 270 SUPERFAMILY SSF47240 2 246 3.95E-43 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS05900 e5830f0368d0ea1da00b32ae1a23c588 336 PANTHER PTHR11101 1 336 7.9E-101 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC_RS05900 e5830f0368d0ea1da00b32ae1a23c588 336 Pfam PF01384 Phosphate transporter family 25 166 3.8E-36 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC_RS05900 e5830f0368d0ea1da00b32ae1a23c588 336 Pfam PF01384 Phosphate transporter family 170 325 6.6E-55 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC_RS10070 7720d1b482e608a892a53380f173f0f6 222 Gene3D G3DSA:2.60.120.240 94 156 9.7E-4 T 22-04-2016 IPR027439 Protective antigen, heptamerisation domain GO:0051260 RPIC_RS10070 7720d1b482e608a892a53380f173f0f6 222 Pfam PF11655 Protein of unknown function (DUF2589) 14 176 6.8E-40 T 22-04-2016 IPR024510 Protein of unknown function DUF2589 RPIC_RS10070 7720d1b482e608a892a53380f173f0f6 222 ProDom PD104924 XAC1607 AF0417 13 186 2.0E-73 T 22-04-2016 RPIC_RS16665 780bd2f7b0507c362f8aac37e2b2f2b9 357 Pfam PF11209 Protein of unknown function (DUF2993) 83 349 1.3E-9 T 22-04-2016 IPR021373 Protein of unknown function DUF2993 RPIC_RS13825 47e92942802746512da76e5daeab69de 349 PANTHER PTHR30160:SF13 24 349 1.1E-65 T 22-04-2016 RPIC_RS13825 47e92942802746512da76e5daeab69de 349 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 23 335 4.6E-103 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RPIC_RS13825 47e92942802746512da76e5daeab69de 349 PANTHER PTHR30160 24 349 1.1E-65 T 22-04-2016 RPIC_RS13825 47e92942802746512da76e5daeab69de 349 Gene3D G3DSA:3.40.50.300 55 153 8.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13825 47e92942802746512da76e5daeab69de 349 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 29 319 9.1E-67 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RPIC_RS13825 47e92942802746512da76e5daeab69de 349 SUPERFAMILY SSF52540 56 171 6.57E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13825 47e92942802746512da76e5daeab69de 349 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 11 336 38.557 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 RPIC_RS11425 6ceb48f4d370e357d1bba0f286d1312a 95 Gene3D G3DSA:3.30.50.20 26 90 1.9E-5 T 22-04-2016 RPIC_RS11425 6ceb48f4d370e357d1bba0f286d1312a 95 Pfam PF06147 Protein of unknown function (DUF968) 2 63 8.1E-7 T 22-04-2016 IPR010373 Protein of unknown function DUF968 RPIC_RS10415 f8923a0b3302c706dca56c1c3c95df19 242 Pfam PF01618 MotA/TolQ/ExbB proton channel family 95 206 5.6E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 RPIC_RS10415 f8923a0b3302c706dca56c1c3c95df19 242 PANTHER PTHR30625 22 217 2.5E-44 T 22-04-2016 RPIC_RS10415 f8923a0b3302c706dca56c1c3c95df19 242 PANTHER PTHR30625:SF3 22 217 2.5E-44 T 22-04-2016 RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 Pfam PF00550 Phosphopantetheine attachment site 7 72 6.9E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 SUPERFAMILY SSF47336 2 77 2.22E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 Gene3D G3DSA:1.10.1200.10 3 77 3.0E-34 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 9.0E-13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.983 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 PANTHER PTHR20863 4 73 5.5E-29 T 22-04-2016 RPIC_RS04515 f49c2e49bfb4ac03e58553abc38a9694 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 1.7E-34 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 RPIC_RS02510 790a8c640a7fd2429433db8a9e837c7b 452 Gene3D G3DSA:3.90.1300.10 9 451 6.0E-115 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS02510 790a8c640a7fd2429433db8a9e837c7b 452 SUPERFAMILY SSF75304 9 451 4.97E-113 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS02510 790a8c640a7fd2429433db8a9e837c7b 452 Pfam PF01425 Amidase 26 441 1.9E-87 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS02510 790a8c640a7fd2429433db8a9e837c7b 452 PANTHER PTHR11895:SF73 9 449 1.3E-109 T 22-04-2016 RPIC_RS02510 790a8c640a7fd2429433db8a9e837c7b 452 PANTHER PTHR11895 9 449 1.3E-109 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RPIC_RS03600 acff4b67f4d14ac8e52342086252d058 127 PANTHER PTHR35371 1 124 4.2E-30 T 22-04-2016 RPIC_RS03600 acff4b67f4d14ac8e52342086252d058 127 Pfam PF01124 MAPEG family 3 124 7.2E-27 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein RPIC_RS03600 acff4b67f4d14ac8e52342086252d058 127 SUPERFAMILY SSF161084 3 122 6.02E-28 T 22-04-2016 RPIC_RS03600 acff4b67f4d14ac8e52342086252d058 127 PANTHER PTHR35371:SF1 1 124 4.2E-30 T 22-04-2016 RPIC_RS03600 acff4b67f4d14ac8e52342086252d058 127 Gene3D G3DSA:1.20.120.550 4 124 1.7E-19 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain RPIC_RS03685 8eff9d6f4cf5cf4e841b119d1b6997ee 404 PANTHER PTHR23537 22 404 4.2E-56 T 22-04-2016 RPIC_RS03685 8eff9d6f4cf5cf4e841b119d1b6997ee 404 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 32 393 4.8E-119 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB RPIC_RS03685 8eff9d6f4cf5cf4e841b119d1b6997ee 404 Gene3D G3DSA:1.20.1250.20 26 210 7.6E-10 T 22-04-2016 RPIC_RS03685 8eff9d6f4cf5cf4e841b119d1b6997ee 404 Gene3D G3DSA:1.20.1250.20 224 403 8.5E-11 T 22-04-2016 RPIC_RS03685 8eff9d6f4cf5cf4e841b119d1b6997ee 404 PANTHER PTHR23537:SF1 22 404 4.2E-56 T 22-04-2016 RPIC_RS03685 8eff9d6f4cf5cf4e841b119d1b6997ee 404 SUPERFAMILY SSF103473 21 400 3.14E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS16015 b491902d24c39479f7088e22451c78dd 241 PANTHER PTHR34322 2 211 6.1E-31 T 22-04-2016 RPIC_RS16015 b491902d24c39479f7088e22451c78dd 241 PANTHER PTHR34322:SF1 2 211 6.1E-31 T 22-04-2016 RPIC_RS16015 b491902d24c39479f7088e22451c78dd 241 SMART SM01321 9 124 3.9E-35 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS16015 b491902d24c39479f7088e22451c78dd 241 Gene3D G3DSA:3.30.70.1290 11 127 5.5E-10 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS16015 b491902d24c39479f7088e22451c78dd 241 SUPERFAMILY SSF143422 3 127 3.01E-26 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS16015 b491902d24c39479f7088e22451c78dd 241 Pfam PF01797 Transposase IS200 like 12 124 3.3E-16 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 RPIC_RS18325 f78fba2df0a316fcaaf7668e7cc94068 321 SUPERFAMILY SSF53474 70 316 9.35E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS18325 f78fba2df0a316fcaaf7668e7cc94068 321 Pfam PF01738 Dienelactone hydrolase family 80 316 5.5E-16 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 RPIC_RS18325 f78fba2df0a316fcaaf7668e7cc94068 321 Gene3D G3DSA:3.40.50.1820 66 317 2.7E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06270 b76496d2a197233bec28c913e87d7e92 172 SMART SM01118 2 169 1.8E-11 T 22-04-2016 IPR023577 CYTH domain RPIC_RS06270 b76496d2a197233bec28c913e87d7e92 172 PANTHER PTHR21028 1 172 2.7E-41 T 22-04-2016 RPIC_RS06270 b76496d2a197233bec28c913e87d7e92 172 Gene3D G3DSA:2.40.320.10 3 168 1.7E-36 T 22-04-2016 IPR023577 CYTH domain RPIC_RS06270 b76496d2a197233bec28c913e87d7e92 172 Pfam PF01928 CYTH domain 3 158 8.1E-18 T 22-04-2016 IPR023577 CYTH domain RPIC_RS06270 b76496d2a197233bec28c913e87d7e92 172 SUPERFAMILY SSF55154 3 167 1.28E-33 T 22-04-2016 IPR033469 CYTH-like domain RPIC_RS06270 b76496d2a197233bec28c913e87d7e92 172 PANTHER PTHR21028:SF2 1 172 2.7E-41 T 22-04-2016 RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 Gene3D G3DSA:3.40.190.10 40 126 2.0E-26 T 22-04-2016 RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 Gene3D G3DSA:3.40.190.10 234 275 2.0E-26 T 22-04-2016 RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 Gene3D G3DSA:3.40.190.10 127 233 3.0E-22 T 22-04-2016 RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 SUPERFAMILY SSF53850 8 274 5.27E-56 T 22-04-2016 RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 271 1.9E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 SMART SM00062 43 273 3.1E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 PANTHER PTHR30085:SF2 10 300 7.0E-93 T 22-04-2016 RPIC_RS18035 ee6b4857ff43512bf51bfdbd00d701b9 302 PANTHER PTHR30085 10 300 7.0E-93 T 22-04-2016 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 SUPERFAMILY SSF46955 4 111 7.33E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 SMART SM00422 4 73 4.2E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 115 1.3E-49 T 22-04-2016 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 9.8E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 9.8E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 9.8E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.5E-12 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS08770 8baabb393e4ad72e9666f60a2613c35f 120 Gene3D G3DSA:1.10.1660.10 4 112 7.4E-22 T 22-04-2016 RPIC_RS06050 ede3e1ca52c684e662cfce1e7bb3188a 71 Pfam PF03459 TOBE domain 8 67 3.8E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 RPIC_RS06050 ede3e1ca52c684e662cfce1e7bb3188a 71 SUPERFAMILY SSF50331 6 69 5.83E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal RPIC_RS06050 ede3e1ca52c684e662cfce1e7bb3188a 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 6 69 8.6E-18 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 RPIC_RS06050 ede3e1ca52c684e662cfce1e7bb3188a 71 Gene3D G3DSA:2.40.50.100 6 69 2.0E-22 T 22-04-2016 RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 Pfam PF08238 Sel1 repeat 75 106 1.2E-5 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 Pfam PF08238 Sel1 repeat 146 180 8.5E-9 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 Pfam PF08238 Sel1 repeat 182 218 5.4E-9 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 Pfam PF08238 Sel1 repeat 110 144 1.8E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 SMART SM00671 181 218 3.1E-8 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 SMART SM00671 109 144 7.6E-7 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 SMART SM00671 73 108 7.7E-4 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 SMART SM00671 41 72 180.0 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 SMART SM00671 145 180 1.9E-9 T 22-04-2016 IPR006597 Sel1-like repeat RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 Gene3D G3DSA:1.25.40.10 142 226 1.1E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 Gene3D G3DSA:1.25.40.10 36 141 1.0E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 PANTHER PTHR11102 38 228 3.2E-50 T 22-04-2016 RPIC_RS18480 ad36a2c1460b7f06b33dc422f41dafb5 248 SUPERFAMILY SSF81901 42 226 1.83E-45 T 22-04-2016 RPIC_RS10675 1769b6c2d6fdddef149adf9dde9804a5 134 Gene3D G3DSA:3.10.180.10 9 119 3.2E-11 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS10675 1769b6c2d6fdddef149adf9dde9804a5 134 SUPERFAMILY SSF54593 8 123 5.2E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS01520 a03ee6ba25da5d4e2ac56ca160e420a9 129 SUPERFAMILY SSF48498 12 120 4.94E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS01520 a03ee6ba25da5d4e2ac56ca160e420a9 129 Gene3D G3DSA:1.10.357.10 12 121 2.1E-9 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS01525 e6ab5c5760a03320e54db240d370acc6 35 Gene3D G3DSA:1.10.10.60 2 33 1.7E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS01525 e6ab5c5760a03320e54db240d370acc6 35 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 31 3.9E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS01525 e6ab5c5760a03320e54db240d370acc6 35 SUPERFAMILY SSF46689 2 34 7.48E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 SUPERFAMILY SSF52833 2 81 1.22E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 PANTHER PTHR11571 1 229 2.3E-100 T 22-04-2016 RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 Gene3D G3DSA:1.20.1050.10 100 206 1.4E-52 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 Gene3D G3DSA:3.40.30.10 1 99 1.6E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 PANTHER PTHR11571:SF139 1 229 2.3E-100 T 22-04-2016 RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 Pfam PF14497 Glutathione S-transferase, C-terminal domain 108 216 8.9E-30 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal RPIC_RS16590 10b608358ef700c9d8089079a3bf82cb 238 SUPERFAMILY SSF47616 107 233 1.42E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like RPIC_RS06930 90ad345eccfa84097925cf3637049b9c 106 Pfam PF10734 Protein of unknown function (DUF2523) 11 93 2.0E-24 T 22-04-2016 IPR019670 Protein of unkown function DUF2523 RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 SUPERFAMILY SSF110849 88 163 9.24E-14 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 SUPERFAMILY SSF109709 174 288 1.83E-9 T 22-04-2016 RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 SMART SM00470 86 184 7.3E-5 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 PANTHER PTHR33375 46 310 3.0E-16 T 22-04-2016 RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 84 240 3.5E-19 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 Pfam PF02195 ParB-like nuclease domain 87 159 2.5E-9 T 22-04-2016 IPR003115 ParB/Sulfiredoxin RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 Gene3D G3DSA:3.90.1530.10 85 162 1.8E-11 T 22-04-2016 RPIC_RS07465 e62f49097c32d0117816cc55ca7ebe72 358 PANTHER PTHR33375:SF1 46 310 3.0E-16 T 22-04-2016 RPIC_RS14975 258e2686e068a296072f5e20917eb062 370 Pfam PF15984 Bacterial collagen, middle region 98 294 1.5E-60 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain RPIC_RS01515 e6b8c095ba3a6c5c697c8d38515f667f 256 PANTHER PTHR10859 11 253 3.4E-55 T 22-04-2016 RPIC_RS01515 e6b8c095ba3a6c5c697c8d38515f667f 256 Pfam PF00535 Glycosyl transferase family 2 12 127 9.5E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS01515 e6b8c095ba3a6c5c697c8d38515f667f 256 PANTHER PTHR10859:SF84 11 253 3.4E-55 T 22-04-2016 RPIC_RS01515 e6b8c095ba3a6c5c697c8d38515f667f 256 Gene3D G3DSA:3.90.550.10 12 132 2.9E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS01515 e6b8c095ba3a6c5c697c8d38515f667f 256 SUPERFAMILY SSF53448 12 237 1.35E-33 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS01405 92bdc93e9b2bf89922f2b311d0c65799 107 Gene3D G3DSA:1.10.760.10 27 99 4.2E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS01405 92bdc93e9b2bf89922f2b311d0c65799 107 PANTHER PTHR33751 14 103 1.8E-23 T 22-04-2016 RPIC_RS01405 92bdc93e9b2bf89922f2b311d0c65799 107 PANTHER PTHR33751:SF3 14 103 1.8E-23 T 22-04-2016 RPIC_RS01405 92bdc93e9b2bf89922f2b311d0c65799 107 Pfam PF00034 Cytochrome c 32 98 5.7E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS01405 92bdc93e9b2bf89922f2b311d0c65799 107 SUPERFAMILY SSF46626 17 98 7.02E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS16350 8d39232b87abb6de7586a82fd159ffb9 234 Pfam PF06672 Protein of unknown function (DUF1175) 28 233 5.2E-85 T 22-04-2016 IPR009558 Protein of unknown function DUF1175 RPIC_RS16350 8d39232b87abb6de7586a82fd159ffb9 234 Gene3D G3DSA:3.90.1720.10 156 203 4.4E-5 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS00385 ddbd48cb14041aca7c1c04b3a261e1c8 215 PANTHER PTHR30086:SF14 1 208 7.1E-38 T 22-04-2016 RPIC_RS00385 ddbd48cb14041aca7c1c04b3a261e1c8 215 Pfam PF01810 LysE type translocator 14 207 3.4E-25 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS00385 ddbd48cb14041aca7c1c04b3a261e1c8 215 PIRSF PIRSF006324 1 214 3.5E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS00385 ddbd48cb14041aca7c1c04b3a261e1c8 215 PANTHER PTHR30086 1 208 7.1E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 SUPERFAMILY SSF55326 13 176 1.64E-53 T 22-04-2016 RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 SUPERFAMILY SSF56042 177 346 2.39E-60 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 183 345 4.4E-36 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 Gene3D G3DSA:3.30.1330.10 28 176 2.3E-64 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 PANTHER PTHR10520 13 350 1.3E-210 T 22-04-2016 RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 13 340 1.6E-138 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 13 349 46.97 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 170 1.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain RPIC_RS14080 836e0f7fb1ec7f1eacba5cca8d853831 351 Gene3D G3DSA:3.90.650.10 178 349 1.5E-68 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 PANTHER PTHR38431 117 351 3.6E-25 T 22-04-2016 RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 Gene3D G3DSA:3.40.190.10 264 319 2.9E-6 T 22-04-2016 RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 SUPERFAMILY SSF53850 117 327 1.21E-9 T 22-04-2016 RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 Pfam PF12727 PBP superfamily domain 133 323 4.8E-49 T 22-04-2016 IPR024370 PBP domain RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 Gene3D G3DSA:1.10.10.10 3 122 1.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 SUPERFAMILY SSF46785 5 136 9.52E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS11035 7ef349e951138b3f56a89db51afdf2b5 366 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 7.2E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RPIC_RS15230 35a1bf37242fa61319fc55c71f74464e 413 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 39 412 40.278 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RPIC_RS15230 35a1bf37242fa61319fc55c71f74464e 413 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 42 403 1.6E-123 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 RPIC_RS15230 35a1bf37242fa61319fc55c71f74464e 413 PANTHER PTHR30474 21 405 8.6E-143 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC_RS15230 35a1bf37242fa61319fc55c71f74464e 413 PANTHER PTHR30474:SF2 21 405 8.6E-143 T 22-04-2016 RPIC_RS15230 35a1bf37242fa61319fc55c71f74464e 413 Pfam PF01098 Cell cycle protein 44 405 6.8E-106 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 RPIC_RS24910 5c42e9a805d283db8fd476ef4d881c52 169 Pfam PF16986 Heavy-metal resistance protein CzcE 88 166 3.6E-27 T 22-04-2016 IPR031560 Heavy-metal resistance protein CzcE RPIC_RS16650 1dd1e0e296f5ff1919f5f8e50d284f5b 298 PIRSF PIRSF007580 1 275 2.5E-64 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC_RS16650 1dd1e0e296f5ff1919f5f8e50d284f5b 298 PANTHER PTHR39456:SF2 20 271 1.9E-49 T 22-04-2016 RPIC_RS16650 1dd1e0e296f5ff1919f5f8e50d284f5b 298 PANTHER PTHR39456 20 271 1.9E-49 T 22-04-2016 RPIC_RS16650 1dd1e0e296f5ff1919f5f8e50d284f5b 298 Pfam PF10118 Predicted metal-dependent hydrolase 5 256 6.2E-76 T 22-04-2016 IPR016516 Uncharacterised conserved protein UCP07580 RPIC_RS15030 64ba4e8d41de5dea31fc98beaddd8bb1 198 PANTHER PTHR30417:SF4 10 183 1.2E-57 T 22-04-2016 RPIC_RS15030 64ba4e8d41de5dea31fc98beaddd8bb1 198 SUPERFAMILY SSF55846 8 185 3.93E-62 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC_RS15030 64ba4e8d41de5dea31fc98beaddd8bb1 198 PANTHER PTHR30417 10 183 1.2E-57 T 22-04-2016 RPIC_RS15030 64ba4e8d41de5dea31fc98beaddd8bb1 198 SMART SM00644 21 173 8.5E-53 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC_RS15030 64ba4e8d41de5dea31fc98beaddd8bb1 198 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 174 1.4E-21 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC_RS15030 64ba4e8d41de5dea31fc98beaddd8bb1 198 Gene3D G3DSA:3.40.80.10 10 185 4.6E-66 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 RPIC_RS05150 41041af6b5d54eac88e9a08c31df1f5a 99 Gene3D G3DSA:3.30.70.900 1 97 2.2E-17 T 22-04-2016 RPIC_RS05150 41041af6b5d54eac88e9a08c31df1f5a 99 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 3.8E-12 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain RPIC_RS05150 41041af6b5d54eac88e9a08c31df1f5a 99 SUPERFAMILY SSF54909 1 97 5.75E-24 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS07080 88ab6e9bb64e4880dfafadb4b3009a82 300 Pfam PF04116 Fatty acid hydroxylase superfamily 88 235 3.1E-23 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC_RS06110 4f53e211f1255b68be1c7ee2fed90f18 140 SUPERFAMILY SSF110857 7 138 9.42E-28 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC_RS06110 4f53e211f1255b68be1c7ee2fed90f18 140 Gene3D G3DSA:3.10.490.10 8 136 1.1E-28 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like RPIC_RS06110 4f53e211f1255b68be1c7ee2fed90f18 140 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 9 133 2.8E-20 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 Gene3D G3DSA:1.10.287.90 37 122 5.6E-32 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 PIRSF PIRSF000292 13 326 2.9E-124 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 167 237 8.1E-9 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 PANTHER PTHR22888:SF13 24 284 5.1E-124 T 22-04-2016 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 SUPERFAMILY SSF81464 38 126 2.78E-22 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 Gene3D G3DSA:2.60.40.420 141 296 9.2E-42 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 SUPERFAMILY SSF49503 139 297 3.35E-51 T 22-04-2016 IPR008972 Cupredoxin RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 Pfam PF06481 COX Aromatic Rich Motif 256 300 2.7E-18 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 PANTHER PTHR22888 24 284 5.1E-124 T 22-04-2016 RPIC_RS09210 b5da333b6ffed946a58ec3fbd51af6ee 350 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 23 256 3.5E-105 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RPIC_RS12365 c2342b54a562066e29c9ad40c480b852 161 Pfam PF01814 Hemerythrin HHE cation binding domain 2 133 6.0E-17 T 22-04-2016 IPR012312 Haemerythrin-like RPIC_RS12365 c2342b54a562066e29c9ad40c480b852 161 Gene3D G3DSA:1.20.120.520 1 157 1.8E-39 T 22-04-2016 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 Gene3D G3DSA:3.40.50.720 398 534 5.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 PRINTS PR00335 TrkA potassium uptake protein signature 450 460 2.4E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 PRINTS PR00335 TrkA potassium uptake protein signature 461 471 2.4E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 PRINTS PR00335 TrkA potassium uptake protein signature 421 435 2.4E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 PRINTS PR00335 TrkA potassium uptake protein signature 404 418 2.4E-7 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 PANTHER PTHR16254 1 559 7.6E-226 T 22-04-2016 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 Pfam PF02254 TrkA-N domain 405 517 7.3E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 Pfam PF00999 Sodium/hydrogen exchanger family 11 375 1.6E-67 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 286 2.7E-86 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 SUPERFAMILY SSF51735 404 534 8.87E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS16740 bd8e18d3b52a45afab98430d4f17aa79 646 PANTHER PTHR16254:SF6 1 559 7.6E-226 T 22-04-2016 RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 Pfam PF13458 Periplasmic binding protein 29 371 2.7E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 PANTHER PTHR30483 7 378 3.1E-88 T 22-04-2016 RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 Gene3D G3DSA:3.40.50.2300 28 229 1.7E-64 T 22-04-2016 RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 94 104 1.6E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 260 278 1.6E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 1.6E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 SUPERFAMILY SSF53822 27 375 6.48E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I RPIC_RS17320 53e29ab7c8b005ffac8445390dfd51d8 381 PANTHER PTHR30483:SF20 7 378 3.1E-88 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 SUPERFAMILY SSF46767 71 155 5.76E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 SUPERFAMILY SSF53155 7 77 5.1E-13 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 Gene3D G3DSA:1.10.10.10 71 156 1.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 73 155 5.4E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 120 126 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 153 7.0E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 PANTHER PTHR10815 39 155 1.5E-42 T 22-04-2016 RPIC_RS13890 821dff9aaca3da0622ed7a68c1ec515b 158 PANTHER PTHR10815:SF5 39 155 1.5E-42 T 22-04-2016 RPIC_RS04905 608a81e08ef87f831b408a34974d660c 358 Gene3D G3DSA:3.60.21.10 196 287 8.4E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS04905 608a81e08ef87f831b408a34974d660c 358 Gene3D G3DSA:3.60.21.10 58 117 8.4E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS04905 608a81e08ef87f831b408a34974d660c 358 SUPERFAMILY SSF56300 153 286 4.69E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS04905 608a81e08ef87f831b408a34974d660c 358 SUPERFAMILY SSF56300 58 123 4.69E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 PANTHER PTHR10366 3 276 1.9E-186 T 22-04-2016 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 PANTHER PTHR10366 294 337 1.9E-186 T 22-04-2016 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 330 5.8E-136 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 Gene3D G3DSA:3.90.25.10 187 241 6.8E-47 T 22-04-2016 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 Gene3D G3DSA:3.90.25.10 288 339 6.8E-47 T 22-04-2016 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 SUPERFAMILY SSF51735 3 334 1.76E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 340 52.101 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 336 3.3E-143 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 PANTHER PTHR10366:SF32 3 276 1.9E-186 T 22-04-2016 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 PANTHER PTHR10366:SF32 294 337 1.9E-186 T 22-04-2016 RPIC_RS05745 e00344d289867c531bbfc02095d135ae 344 Gene3D G3DSA:3.40.50.720 2 184 2.1E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12670 2551a901fcfc35ceca2ac3feb23ab1e9 153 SUPERFAMILY SSF103473 2 145 5.36E-13 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS12670 2551a901fcfc35ceca2ac3feb23ab1e9 153 Gene3D G3DSA:1.20.1250.20 3 145 1.1E-11 T 22-04-2016 RPIC_RS05625 1e948e3fdb1e63ec9fdce30b2eb9b05b 116 Pfam PF16778 Phage tail assembly chaperone protein 53 112 7.6E-19 T 22-04-2016 IPR031893 Phage tail assembly chaperone protein RPIC_RS04165 edbe0b3691fdd3fa2b22c4f3720d8fbf 312 PANTHER PTHR12715 17 307 2.4E-73 T 22-04-2016 RPIC_RS04165 edbe0b3691fdd3fa2b22c4f3720d8fbf 312 Pfam PF00892 EamA-like transporter family 18 145 5.2E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS04165 edbe0b3691fdd3fa2b22c4f3720d8fbf 312 Pfam PF00892 EamA-like transporter family 165 302 4.3E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS04165 edbe0b3691fdd3fa2b22c4f3720d8fbf 312 SUPERFAMILY SSF103481 199 304 3.92E-11 T 22-04-2016 RPIC_RS04165 edbe0b3691fdd3fa2b22c4f3720d8fbf 312 SUPERFAMILY SSF103481 60 146 1.44E-9 T 22-04-2016 RPIC_RS04165 edbe0b3691fdd3fa2b22c4f3720d8fbf 312 PANTHER PTHR12715:SF9 17 307 2.4E-73 T 22-04-2016 RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 SMART SM00965 318 366 2.1E-9 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 Pfam PF11741 AMIN domain 66 148 6.1E-9 T 22-04-2016 IPR021731 AMIN domain RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 660 693 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 Pfam PF00263 Bacterial type II and III secretion system protein 560 714 2.1E-49 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 PANTHER PTHR30604 105 720 3.5E-107 T 22-04-2016 RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 470 480 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 556 580 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 702 716 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 PRINTS PR00811 Bacterial general secretion pathway protein D signature 679 697 2.3E-22 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 Pfam PF03958 Bacterial type II/III secretion system short domain 392 470 4.2E-13 T 22-04-2016 IPR005644 NolW-like RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 293 714 1.1E-155 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 RPIC_RS16040 dba2319219440e65d035fc05dc46af38 721 Pfam PF07660 Secretin and TonB N terminus short domain 320 365 1.8E-8 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 RPIC_RS11675 b6e646fcc0bd9bdb33d41cc532ca213f 318 Pfam PF06166 Protein of unknown function (DUF979) 6 316 6.1E-131 T 22-04-2016 IPR009323 Protein of unknown function DUF979 RPIC_RS13945 3544450f0ad5f0503849da27cb68c7e6 107 Pfam PF12112 Protein of unknown function (DUF3579) 5 94 3.0E-38 T 22-04-2016 IPR021969 Protein of unknown function DUF3579 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 SMART SM01103 6 89 7.3E-40 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 Gene3D G3DSA:3.30.110.60 6 92 9.1E-27 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 SUPERFAMILY SSF75471 5 92 1.7E-24 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 PANTHER PTHR40065 4 127 1.2E-12 T 22-04-2016 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 89 3.0E-37 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 PANTHER PTHR40065:SF1 4 127 1.2E-12 T 22-04-2016 RPIC_RS10000 fad92120fa2054a50bb5aa99a173b191 166 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 2.8E-15 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 240 7.4E-63 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 4 248 38.743 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 PANTHER PTHR21139 3 245 4.9E-113 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 Gene3D G3DSA:3.20.20.70 4 246 1.1E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 Pfam PF00121 Triosephosphate isomerase 6 245 3.8E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC_RS10900 c7040d688420582048c1bc5939936bf9 248 SUPERFAMILY SSF51351 4 245 5.37E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 RPIC_RS18810 8703687539119e0ba71ed53eaac12568 146 Pfam PF00501 AMP-binding enzyme 69 144 2.1E-15 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RPIC_RS18810 8703687539119e0ba71ed53eaac12568 146 Gene3D G3DSA:3.40.50.980 63 143 2.5E-15 T 22-04-2016 RPIC_RS18810 8703687539119e0ba71ed53eaac12568 146 PANTHER PTHR24095:SF169 52 146 9.5E-40 T 22-04-2016 RPIC_RS18810 8703687539119e0ba71ed53eaac12568 146 PANTHER PTHR24095 52 146 9.5E-40 T 22-04-2016 RPIC_RS18810 8703687539119e0ba71ed53eaac12568 146 SUPERFAMILY SSF56801 50 145 4.84E-20 T 22-04-2016 RPIC_RS14395 4498d29282c1c298f71ab1ca26d7fe18 291 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 68 90 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site RPIC_RS14395 4498d29282c1c298f71ab1ca26d7fe18 291 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 12 288 1.8E-97 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 RPIC_RS14395 4498d29282c1c298f71ab1ca26d7fe18 291 Pfam PF01040 UbiA prenyltransferase family 29 273 1.9E-57 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 RPIC_RS14395 4498d29282c1c298f71ab1ca26d7fe18 291 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 6 289 28.271 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 RPIC_RS14395 4498d29282c1c298f71ab1ca26d7fe18 291 PANTHER PTHR11048 7 285 2.7E-70 T 22-04-2016 RPIC_RS10835 a4451dd314c44fa2e4530eeebfe1e600 103 PANTHER PTHR11434 5 103 7.5E-40 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIC_RS10835 a4451dd314c44fa2e4530eeebfe1e600 103 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 98 9.6E-24 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIC_RS10835 a4451dd314c44fa2e4530eeebfe1e600 103 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 103 20.712 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 RPIC_RS18525 563621a5c774d9c4ed876247937da357 214 SUPERFAMILY SSF53639 1 211 1.96E-54 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS18525 563621a5c774d9c4ed876247937da357 214 PANTHER PTHR22789 1 211 8.1E-80 T 22-04-2016 RPIC_RS18525 563621a5c774d9c4ed876247937da357 214 SMART SM01007 11 189 5.2E-45 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS18525 563621a5c774d9c4ed876247937da357 214 Gene3D G3DSA:3.40.225.10 5 211 8.9E-63 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS18525 563621a5c774d9c4ed876247937da357 214 PANTHER PTHR22789:SF6 1 211 8.1E-80 T 22-04-2016 RPIC_RS18525 563621a5c774d9c4ed876247937da357 214 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 188 6.0E-40 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal RPIC_RS11585 bd54cf07643f481fca6a05bd508408fd 393 PANTHER PTHR19446:SF383 52 306 2.2E-12 T 22-04-2016 RPIC_RS11585 bd54cf07643f481fca6a05bd508408fd 393 PANTHER PTHR19446 52 306 2.2E-12 T 22-04-2016 RPIC_RS11585 bd54cf07643f481fca6a05bd508408fd 393 SUPERFAMILY SSF56672 56 363 1.21E-23 T 22-04-2016 RPIC_RS11585 bd54cf07643f481fca6a05bd508408fd 393 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 96 313 3.0E-14 T 22-04-2016 IPR000477 Reverse transcriptase domain RPIC_RS00815 3d92416c20cfc662ec7dafcf1b5001c1 374 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 131 370 3.3E-64 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RPIC_RS00815 3d92416c20cfc662ec7dafcf1b5001c1 374 PANTHER PTHR30188 27 373 8.8E-84 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC_RS00815 3d92416c20cfc662ec7dafcf1b5001c1 374 PANTHER PTHR30188:SF3 27 373 8.8E-84 T 22-04-2016 RPIC_RS00815 3d92416c20cfc662ec7dafcf1b5001c1 374 Pfam PF02405 Permease MlaE 159 367 3.9E-66 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 RPIC_RS03065 c7a802cbea8b4417e182cc74ec69d985 308 SUPERFAMILY SSF53448 14 279 6.47E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS03065 c7a802cbea8b4417e182cc74ec69d985 308 PANTHER PTHR22916:SF29 1 229 5.3E-21 T 22-04-2016 RPIC_RS03065 c7a802cbea8b4417e182cc74ec69d985 308 Pfam PF00535 Glycosyl transferase family 2 16 182 1.3E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS03065 c7a802cbea8b4417e182cc74ec69d985 308 PANTHER PTHR22916 1 229 5.3E-21 T 22-04-2016 RPIC_RS03065 c7a802cbea8b4417e182cc74ec69d985 308 Gene3D G3DSA:3.90.550.10 25 230 5.7E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS03065 c7a802cbea8b4417e182cc74ec69d985 308 TIGRFAM TIGR01556 rhamnosyltran: rhamnosyltransferase 19 300 1.6E-64 T 22-04-2016 IPR006446 Rhamnosyltransferase KEGG: 00540+2.4.-.-|UniPathway: UPA00030 RPIC_RS13800 c67e589257ea11bc7a5ac265d539675a 235 Pfam PF09935 Protein of unknown function (DUF2167) 59 221 1.6E-55 T 22-04-2016 IPR018682 Protein of unknown function DUF2167, membrane RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 466 5.6E-43 T 22-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 Gene3D G3DSA:3.40.810.20 230 493 4.9E-80 T 22-04-2016 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 Gene3D G3DSA:3.40.1080.10 15 222 3.6E-45 T 22-04-2016 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 SUPERFAMILY SSF100950 8 225 2.74E-74 T 22-04-2016 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 PANTHER PTHR21432 8 497 5.7E-253 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 14 218 7.2E-32 T 22-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 SUPERFAMILY SSF100950 229 497 4.35E-82 T 22-04-2016 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 PANTHER PTHR21432:SF10 8 497 5.7E-253 T 22-04-2016 RPIC_RS06630 ae84665559f9fc1de55d45282b8ad667 515 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 16 497 1.3E-229 T 22-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 RPIC_RS03920 6c232c0be4e924c858908cb7f31b7ee9 151 Pfam PF05154 TM2 domain 7 56 9.8E-11 T 22-04-2016 IPR007829 TM2 domain RPIC_RS15970 1276980a4f24556d03e6126ea3795e2c 103 Pfam PF13466 STAS domain 2 85 3.0E-19 T 22-04-2016 IPR002645 STAS domain RPIC_RS15970 1276980a4f24556d03e6126ea3795e2c 103 SUPERFAMILY SSF52091 2 92 1.37E-11 T 22-04-2016 IPR002645 STAS domain RPIC_RS15970 1276980a4f24556d03e6126ea3795e2c 103 Gene3D G3DSA:3.30.750.24 2 93 3.0E-11 T 22-04-2016 IPR002645 STAS domain RPIC_RS08465 59713e6be0494b932bd0c7512be28c0b 491 SUPERFAMILY SSF52402 51 123 1.31E-5 T 22-04-2016 RPIC_RS08465 59713e6be0494b932bd0c7512be28c0b 491 Gene3D G3DSA:3.40.50.620 35 122 3.5E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS06240 c1319821b839423200e49b9934061c20 341 Pfam PF03576 Peptidase family S58 17 332 9.5E-107 T 22-04-2016 IPR005321 Peptidase S58, DmpA RPIC_RS06240 c1319821b839423200e49b9934061c20 341 SUPERFAMILY SSF56266 9 334 1.1E-98 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS06240 c1319821b839423200e49b9934061c20 341 PANTHER PTHR36512 1 339 5.9E-60 T 22-04-2016 RPIC_RS06240 c1319821b839423200e49b9934061c20 341 Gene3D G3DSA:3.60.70.12 6 338 3.9E-122 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 RPIC_RS06240 c1319821b839423200e49b9934061c20 341 PANTHER PTHR36512:SF1 1 339 5.9E-60 T 22-04-2016 RPIC_RS03180 c66ac48e87d3fa713baf1efc4fa62515 370 PANTHER PTHR22893:SF7 1 353 2.5E-149 T 22-04-2016 RPIC_RS03180 c66ac48e87d3fa713baf1efc4fa62515 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 334 1.0E-63 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RPIC_RS03180 c66ac48e87d3fa713baf1efc4fa62515 370 PANTHER PTHR22893 1 353 2.5E-149 T 22-04-2016 RPIC_RS03180 c66ac48e87d3fa713baf1efc4fa62515 370 Gene3D G3DSA:3.20.20.70 1 350 7.7E-123 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS03180 c66ac48e87d3fa713baf1efc4fa62515 370 SUPERFAMILY SSF51395 1 356 2.78E-112 T 22-04-2016 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 PANTHER PTHR30349 141 274 2.2E-26 T 22-04-2016 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 PANTHER PTHR30349 298 553 2.2E-26 T 22-04-2016 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 SUPERFAMILY SSF56349 219 551 4.71E-36 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 Gene3D G3DSA:1.10.150.130 228 332 2.6E-12 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 Gene3D G3DSA:1.10.443.10 373 550 1.8E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 PANTHER PTHR30349:SF5 141 274 2.2E-26 T 22-04-2016 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 PANTHER PTHR30349:SF5 298 553 2.2E-26 T 22-04-2016 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 Pfam PF00589 Phage integrase family 375 545 1.7E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS08540 753f16054a514423fa2c83b4b90ff969 559 Pfam PF12482 Phage integrase protein 96 186 4.5E-30 T 22-04-2016 IPR022169 Protein of unknown function DUF3701 RPIC_RS14070 648ff4ddf0cc4a979b70d61ea2d48efc 68 SUPERFAMILY SSF57884 19 68 3.53E-8 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS14070 648ff4ddf0cc4a979b70d61ea2d48efc 68 Gene3D G3DSA:3.40.10.10 19 68 7.5E-11 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 RPIC_RS11850 f9ee28d519452294192e36bdcfdcdab9 190 PANTHER PTHR30546 1 190 2.5E-33 T 22-04-2016 RPIC_RS11850 f9ee28d519452294192e36bdcfdcdab9 190 PANTHER PTHR30546:SF0 1 190 2.5E-33 T 22-04-2016 RPIC_RS11850 f9ee28d519452294192e36bdcfdcdab9 190 Pfam PF12724 Flavodoxin domain 6 77 4.9E-9 T 22-04-2016 IPR026816 Flavodoxin domain RPIC_RS11850 f9ee28d519452294192e36bdcfdcdab9 190 Gene3D G3DSA:3.40.50.360 1 188 2.9E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS11850 f9ee28d519452294192e36bdcfdcdab9 190 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 RPIC_RS11850 f9ee28d519452294192e36bdcfdcdab9 190 SUPERFAMILY SSF52218 1 183 7.21E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS01075 e36d4a4525af7ebedf844a4d67c68534 70 Pfam PF11174 Protein of unknown function (DUF2970) 14 69 1.9E-25 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 RPIC_RS12790 6d4eeade0558faaa24afa0f36f27851c 595 Gene3D G3DSA:2.40.160.50 449 584 5.3E-10 T 22-04-2016 RPIC_RS12790 6d4eeade0558faaa24afa0f36f27851c 595 PANTHER PTHR12815:SF12 76 584 4.2E-60 T 22-04-2016 RPIC_RS12790 6d4eeade0558faaa24afa0f36f27851c 595 PANTHER PTHR12815 76 584 4.2E-60 T 22-04-2016 RPIC_RS12790 6d4eeade0558faaa24afa0f36f27851c 595 Pfam PF01103 Surface antigen 372 583 1.1E-29 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 Pfam PF12697 Alpha/beta hydrolase family 26 260 2.5E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 Gene3D G3DSA:3.40.50.1820 5 266 9.7E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 PANTHER PTHR10992 173 268 5.6E-45 T 22-04-2016 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 PANTHER PTHR10992 20 156 5.6E-45 T 22-04-2016 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 SUPERFAMILY SSF53474 5 265 4.22E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 3.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS09800 cc35c7845ecca8cd12c8d01d54f5a3df 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 3.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS07800 84eb99a14f7871b44a022b88fa782b59 640 SUPERFAMILY SSF53098 235 433 3.03E-16 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS07800 84eb99a14f7871b44a022b88fa782b59 640 Pfam PF09299 Mu transposase, C-terminal 462 526 1.4E-10 T 22-04-2016 IPR015378 Transposase-like, Mu, C-terminal RPIC_RS07800 84eb99a14f7871b44a022b88fa782b59 640 Gene3D G3DSA:3.30.420.10 238 432 1.9E-21 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS07800 84eb99a14f7871b44a022b88fa782b59 640 Gene3D G3DSA:1.10.10.60 161 223 3.1E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS07800 84eb99a14f7871b44a022b88fa782b59 640 Pfam PF00665 Integrase core domain 241 378 1.2E-12 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS05450 bd3b9f84f26c32f3aa5818ae1371c1fe 250 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 245 4.7E-37 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RPIC_RS05450 bd3b9f84f26c32f3aa5818ae1371c1fe 250 Gene3D G3DSA:3.20.20.190 8 247 2.3E-60 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC_RS05450 bd3b9f84f26c32f3aa5818ae1371c1fe 250 PANTHER PTHR23344:SF20 8 247 2.6E-57 T 22-04-2016 RPIC_RS05450 bd3b9f84f26c32f3aa5818ae1371c1fe 250 SUPERFAMILY SSF51695 11 247 8.11E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RPIC_RS05450 bd3b9f84f26c32f3aa5818ae1371c1fe 250 PANTHER PTHR23344 8 247 2.6E-57 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 RPIC_RS12535 6d7a73df871b00054bfa8f1297d267c0 105 Pfam PF10734 Protein of unknown function (DUF2523) 11 92 1.7E-23 T 22-04-2016 IPR019670 Protein of unkown function DUF2523 RPIC_RS08580 f868df5985fa0bb87840fd140faaaf3f 535 PANTHER PTHR33908 5 410 2.2E-71 T 22-04-2016 RPIC_RS08580 f868df5985fa0bb87840fd140faaaf3f 535 PANTHER PTHR33908:SF3 5 410 2.2E-71 T 22-04-2016 RPIC_RS08580 f868df5985fa0bb87840fd140faaaf3f 535 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 54 213 1.0E-19 T 22-04-2016 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 9 250 1.6E-79 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 Pfam PF13181 Tetratricopeptide repeat 152 184 0.0034 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 Pfam PF13181 Tetratricopeptide repeat 81 111 2.1E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 SMART SM00028 80 113 0.041 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 SMART SM00028 46 79 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 SMART SM00028 151 184 4.2E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 SUPERFAMILY SSF48452 47 211 6.95E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 Gene3D G3DSA:1.25.40.10 49 237 5.5E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RPIC_RS05250 188dcdf55ab85266f368ad67779732ad 265 PANTHER PTHR23083 50 254 7.0E-25 T 22-04-2016 RPIC_RS18475 5ab740faf35a4bcc2007761393fa5a4b 211 Gene3D G3DSA:3.40.50.150 26 186 9.4E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18475 5ab740faf35a4bcc2007761393fa5a4b 211 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 21 208 5.9E-86 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RPIC_RS18475 5ab740faf35a4bcc2007761393fa5a4b 211 PANTHER PTHR10108:SF831 20 184 2.7E-46 T 22-04-2016 RPIC_RS18475 5ab740faf35a4bcc2007761393fa5a4b 211 PANTHER PTHR10108 20 184 2.7E-46 T 22-04-2016 RPIC_RS18475 5ab740faf35a4bcc2007761393fa5a4b 211 SUPERFAMILY SSF53335 23 200 1.91E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS18475 5ab740faf35a4bcc2007761393fa5a4b 211 Pfam PF07021 Methionine biosynthesis protein MetW 21 208 9.7E-86 T 22-04-2016 IPR010743 Methionine biosynthesis MetW RPIC_RS10390 a3f7ee8c5d069e9435a3b5925bb0e21c 294 PANTHER PTHR30217 1 288 7.1E-62 T 22-04-2016 RPIC_RS10390 a3f7ee8c5d069e9435a3b5925bb0e21c 294 PANTHER PTHR30217:SF8 1 288 7.1E-62 T 22-04-2016 RPIC_RS10390 a3f7ee8c5d069e9435a3b5925bb0e21c 294 Pfam PF01136 Peptidase family U32 107 248 1.5E-12 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS11710 e56ff20062b27ae0cac8d4369f64c796 369 PANTHER PTHR32196 13 367 3.5E-65 T 22-04-2016 RPIC_RS11710 e56ff20062b27ae0cac8d4369f64c796 369 PANTHER PTHR32196:SF22 13 367 3.5E-65 T 22-04-2016 RPIC_RS11710 e56ff20062b27ae0cac8d4369f64c796 369 Pfam PF02653 Branched-chain amino acid transport system / permease component 73 353 7.5E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS09385 e9b7444b3f866b8674840135958e2a85 184 Pfam PF05233 PHB accumulation regulatory domain 126 165 1.9E-17 T 22-04-2016 IPR007897 PHB accumulation regulatory RPIC_RS09385 e9b7444b3f866b8674840135958e2a85 184 Pfam PF05233 PHB accumulation regulatory domain 75 113 1.4E-18 T 22-04-2016 IPR007897 PHB accumulation regulatory RPIC_RS09385 e9b7444b3f866b8674840135958e2a85 184 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 115 2.3E-46 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR RPIC_RS09385 e9b7444b3f866b8674840135958e2a85 184 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 7.5E-32 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal RPIC_RS04840 2d2376f16d4f99225f8f93648dc4c021 181 Pfam PF13761 Domain of unknown function (DUF4166) 18 173 1.9E-38 T 22-04-2016 IPR025311 Domain of unknown function DUF4166 RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 Pfam PF01055 Glycosyl hydrolases family 31 243 687 3.5E-115 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 SUPERFAMILY SSF74650 10 249 2.29E-47 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 Pfam PF13802 Galactose mutarotase-like 149 218 1.4E-21 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 PANTHER PTHR22762:SF7 137 780 8.7E-210 T 22-04-2016 RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 SUPERFAMILY SSF51011 602 682 4.39E-19 T 22-04-2016 RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 PANTHER PTHR22762 137 780 8.7E-210 T 22-04-2016 RPIC_RS04680 49bfbc2940a877468d101a8ad189443a 803 SUPERFAMILY SSF51445 255 597 1.76E-66 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC_RS11290 373079d6aa2390a6ffb336370fedef45 361 ProDom PD104351 DNA TRANSFER GP7 INJECTION AAF75053 GENE DIRECT ACCESSION PRECURSOR GENBANK 189 294 6.0E-18 T 22-04-2016 RPIC_RS02785 4b4ff7d185b32b59b482cb8e280f1ffd 163 Gene3D G3DSA:3.90.10.10 124 156 6.2E-4 T 22-04-2016 RPIC_RS02785 4b4ff7d185b32b59b482cb8e280f1ffd 163 Gene3D G3DSA:3.90.10.10 43 52 6.2E-4 T 22-04-2016 RPIC_RS02785 4b4ff7d185b32b59b482cb8e280f1ffd 163 SUPERFAMILY SSF48695 14 85 7.91E-7 T 22-04-2016 IPR011031 Multihaem cytochrome RPIC_RS02785 4b4ff7d185b32b59b482cb8e280f1ffd 163 SUPERFAMILY SSF48695 119 154 7.91E-7 T 22-04-2016 IPR011031 Multihaem cytochrome RPIC_RS02785 4b4ff7d185b32b59b482cb8e280f1ffd 163 Pfam PF09626 Dihaem cytochrome c 44 154 4.6E-39 T 22-04-2016 IPR018588 Dihaem cytochrome c RPIC_RS08340 45c248900c49722cce4f68192c83d658 166 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 30 141 7.1E-11 T 22-04-2016 IPR007621 TPM domain RPIC_RS08340 45c248900c49722cce4f68192c83d658 166 PANTHER PTHR30373:SF3 15 166 1.1E-59 T 22-04-2016 RPIC_RS08340 45c248900c49722cce4f68192c83d658 166 PANTHER PTHR30373 15 166 1.1E-59 T 22-04-2016 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 Pfam PF01923 Cobalamin adenosyltransferase 8 165 4.4E-56 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 PANTHER PTHR12213 4 181 1.3E-69 T 22-04-2016 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 SUPERFAMILY SSF89028 7 178 3.14E-61 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 8.7E-65 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 27 178 1.0E-73 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 Gene3D G3DSA:1.20.1200.10 17 181 1.3E-65 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 RPIC_RS14285 3ef95e40ed93c6e58ea30477f98c1005 185 PANTHER PTHR12213:SF0 4 181 1.3E-69 T 22-04-2016 RPIC_RS24310 104bf7cfed0499e8c557cf30ebbdf163 162 Pfam PF01384 Phosphate transporter family 16 157 1.6E-37 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC_RS24310 104bf7cfed0499e8c557cf30ebbdf163 162 PANTHER PTHR11101 2 158 3.1E-38 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 RPIC_RS02890 e5424599e2b216d63a0f07fefe194e0e 181 Pfam PF01478 Type IV leader peptidase family 15 116 2.7E-14 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 RPIC_RS04410 8d1c187611bb82f5ca8bdc6b2a9fe212 239 SUPERFAMILY SSF100950 60 236 1.51E-40 T 22-04-2016 RPIC_RS04410 8d1c187611bb82f5ca8bdc6b2a9fe212 239 PANTHER PTHR32479:SF11 12 237 3.4E-39 T 22-04-2016 RPIC_RS04410 8d1c187611bb82f5ca8bdc6b2a9fe212 239 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 138 236 2.0E-30 T 22-04-2016 IPR003741 LUD domain RPIC_RS04410 8d1c187611bb82f5ca8bdc6b2a9fe212 239 PANTHER PTHR32479 12 237 3.4E-39 T 22-04-2016 RPIC_RS04410 8d1c187611bb82f5ca8bdc6b2a9fe212 239 Gene3D G3DSA:3.40.50.10420 60 236 8.1E-46 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain RPIC_RS02925 7ef4373775f804cb928ca46660558ebf 353 PANTHER PTHR23028 8 335 4.3E-31 T 22-04-2016 RPIC_RS02925 7ef4373775f804cb928ca46660558ebf 353 Pfam PF01757 Acyltransferase family 7 317 1.3E-23 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RPIC_RS16705 ae3fbf0d95db189ea9b0bd9540b12dc3 376 Pfam PF13609 Gram-negative porin 8 345 1.5E-50 T 22-04-2016 RPIC_RS16705 ae3fbf0d95db189ea9b0bd9540b12dc3 376 Gene3D G3DSA:2.40.160.10 21 376 1.6E-90 T 22-04-2016 IPR023614 Porin domain RPIC_RS16705 ae3fbf0d95db189ea9b0bd9540b12dc3 376 SUPERFAMILY SSF56935 21 241 2.88E-79 T 22-04-2016 RPIC_RS16705 ae3fbf0d95db189ea9b0bd9540b12dc3 376 SUPERFAMILY SSF56935 272 376 2.88E-79 T 22-04-2016 RPIC_RS13040 1786daf97e1016431561b59083c31129 825 SUPERFAMILY SSF52540 400 739 7.91E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13040 1786daf97e1016431561b59083c31129 825 SMART SM00382 440 704 2.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS13040 1786daf97e1016431561b59083c31129 825 Pfam PF05872 Bacterial protein of unknown function (DUF853) 595 684 1.6E-4 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal RPIC_RS13040 1786daf97e1016431561b59083c31129 825 Gene3D G3DSA:3.40.50.300 633 716 7.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13040 1786daf97e1016431561b59083c31129 825 Gene3D G3DSA:3.40.50.300 590 591 7.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13040 1786daf97e1016431561b59083c31129 825 Gene3D G3DSA:3.40.50.300 405 507 7.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS13040 1786daf97e1016431561b59083c31129 825 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 181 388 6.8E-14 T 22-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 RPIC_RS00465 42b791d1df19b38b28445c3a337bdc15 308 PANTHER PTHR10992:SF778 20 308 5.1E-61 T 22-04-2016 RPIC_RS00465 42b791d1df19b38b28445c3a337bdc15 308 Gene3D G3DSA:3.40.50.1820 20 307 2.7E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00465 42b791d1df19b38b28445c3a337bdc15 308 Pfam PF00561 alpha/beta hydrolase fold 43 156 3.2E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS00465 42b791d1df19b38b28445c3a337bdc15 308 PANTHER PTHR10992 20 308 5.1E-61 T 22-04-2016 RPIC_RS00465 42b791d1df19b38b28445c3a337bdc15 308 SUPERFAMILY SSF53474 18 308 1.54E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS00840 d9b95a9e57eb939d4785ede58f7dca90 414 PANTHER PTHR23501 62 398 4.7E-18 T 22-04-2016 RPIC_RS00840 d9b95a9e57eb939d4785ede58f7dca90 414 Gene3D G3DSA:1.20.1250.20 14 192 6.8E-23 T 22-04-2016 RPIC_RS00840 d9b95a9e57eb939d4785ede58f7dca90 414 Gene3D G3DSA:1.20.1250.20 220 399 4.6E-14 T 22-04-2016 RPIC_RS00840 d9b95a9e57eb939d4785ede58f7dca90 414 SUPERFAMILY SSF103473 13 400 1.22E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS00840 d9b95a9e57eb939d4785ede58f7dca90 414 Pfam PF07690 Major Facilitator Superfamily 224 405 2.4E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS00840 d9b95a9e57eb939d4785ede58f7dca90 414 Pfam PF07690 Major Facilitator Superfamily 18 206 1.9E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS05395 bb28a334ff2e2e8f918f9c42b2dd9151 158 Pfam PF00581 Rhodanese-like domain 31 132 1.3E-5 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05395 bb28a334ff2e2e8f918f9c42b2dd9151 158 SMART SM00450 31 141 3.7E-4 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05395 bb28a334ff2e2e8f918f9c42b2dd9151 158 SUPERFAMILY SSF52821 20 155 1.02E-17 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS05395 bb28a334ff2e2e8f918f9c42b2dd9151 158 Gene3D G3DSA:3.40.250.10 25 156 5.5E-36 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS08705 dcadfc8f1b4ffd566edf1f6bee4a6292 162 Pfam PF04214 Protein of unknown function, DUF 64 132 4.3E-30 T 22-04-2016 IPR007332 Protein of unknown function DUF411 RPIC_RS08705 dcadfc8f1b4ffd566edf1f6bee4a6292 162 SUPERFAMILY SSF52833 27 113 5.25E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 Gene3D G3DSA:3.90.780.10 392 560 4.2E-17 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 2 563 1.9E-256 T 22-04-2016 IPR030998 Thiosulfohydrolase SoxB RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 Pfam PF02872 5'-nucleotidase, C-terminal domain 392 519 2.9E-14 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 Gene3D G3DSA:3.60.21.10 36 55 1.0E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 Gene3D G3DSA:3.60.21.10 109 372 1.0E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 PANTHER PTHR11575 14 553 9.5E-169 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 SUPERFAMILY SSF55816 372 562 1.31E-30 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 PRINTS PR01607 Apyrase family signature 280 303 4.3E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 PRINTS PR01607 Apyrase family signature 36 54 4.3E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 PRINTS PR01607 Apyrase family signature 261 278 4.3E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 PRINTS PR01607 Apyrase family signature 312 332 4.3E-10 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 PANTHER PTHR11575:SF16 14 553 9.5E-169 T 22-04-2016 RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 SUPERFAMILY SSF56300 109 373 2.0E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS17095 bf73b0a32d3b405fca6fd825fce235de 573 SUPERFAMILY SSF56300 34 55 2.0E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 PANTHER PTHR10516 130 168 3.0E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 SUPERFAMILY SSF54534 2 141 7.46E-29 T 22-04-2016 RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 PANTHER PTHR10516:SF316 130 168 3.0E-18 T 22-04-2016 RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 PANTHER PTHR10516:SF316 1 82 3.0E-18 T 22-04-2016 RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 PANTHER PTHR10516 1 82 3.0E-18 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 Gene3D G3DSA:3.10.50.40 123 143 9.2E-9 T 22-04-2016 RPIC_RS04900 fd3f01f09308c9f5a52460398bc8e23b 174 Gene3D G3DSA:3.10.50.40 3 68 9.2E-9 T 22-04-2016 RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 Pfam PF05193 Peptidase M16 inactive domain 198 377 3.5E-33 T 22-04-2016 IPR007863 Peptidase M16, C-terminal RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 PANTHER PTHR11851 21 447 7.7E-77 T 22-04-2016 RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 Gene3D G3DSA:3.30.830.10 264 442 3.2E-32 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 SUPERFAMILY SSF63411 27 237 1.47E-37 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 Gene3D G3DSA:3.30.830.10 29 243 3.5E-32 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 PANTHER PTHR11851:SF140 21 447 7.7E-77 T 22-04-2016 RPIC_RS01180 d9066cf2e2b131d64c02c669ea8900d6 450 SUPERFAMILY SSF63411 262 448 3.33E-46 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RPIC_RS12890 b3a9c9796f02787e590bab07728642d5 115 Pfam PF11171 Protein of unknown function (DUF2958) 4 113 5.5E-44 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RPIC_RS03075 a72e10a6e924e4dcd66913a87812c653 203 Pfam PF01757 Acyltransferase family 34 175 2.3E-9 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RPIC_RS18265 0ca429ba89bf35cfca3deb11b3397187 126 Gene3D G3DSA:3.40.30.10 16 83 3.2E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS18265 0ca429ba89bf35cfca3deb11b3397187 126 SUPERFAMILY SSF52833 12 101 2.97E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS18265 0ca429ba89bf35cfca3deb11b3397187 126 Pfam PF00085 Thioredoxin 18 84 8.0E-10 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 RPIC_RS04835 c47d030d0a62f154e0bf997762dcab10 129 Pfam PF04134 Protein of unknown function, DUF393 3 112 7.0E-34 T 22-04-2016 IPR007263 Protein of unknown function DUF393 RPIC_RS04835 c47d030d0a62f154e0bf997762dcab10 129 PANTHER PTHR33639 2 129 3.6E-49 T 22-04-2016 RPIC_RS09320 7112dc4d734b2a55964f0ad059c92f91 182 SUPERFAMILY SSF52833 18 181 4.85E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS09320 7112dc4d734b2a55964f0ad059c92f91 182 PANTHER PTHR10681:SF87 10 182 1.4E-74 T 22-04-2016 RPIC_RS09320 7112dc4d734b2a55964f0ad059c92f91 182 Gene3D G3DSA:3.40.30.10 4 181 7.0E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS09320 7112dc4d734b2a55964f0ad059c92f91 182 PANTHER PTHR10681 10 182 1.4E-74 T 22-04-2016 RPIC_RS09320 7112dc4d734b2a55964f0ad059c92f91 182 PIRSF PIRSF000239 1 182 4.4E-41 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 RPIC_RS09320 7112dc4d734b2a55964f0ad059c92f91 182 Pfam PF00578 AhpC/TSA family 28 143 6.0E-25 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS07015 dc3f3a070211881e0b5670ec65655809 283 PANTHER PTHR30193 17 276 1.1E-39 T 22-04-2016 RPIC_RS07015 dc3f3a070211881e0b5670ec65655809 283 Gene3D G3DSA:1.10.3720.10 23 273 6.8E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07015 dc3f3a070211881e0b5670ec65655809 283 SUPERFAMILY SSF161098 18 272 2.24E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07015 dc3f3a070211881e0b5670ec65655809 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 271 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS07410 1aee8284409758da640f88fcf36a016e 316 Pfam PF01963 TraB family 41 301 1.8E-25 T 22-04-2016 IPR002816 Pheromone shutdown, TraB RPIC_RS13130 eed221b5389bfba5282e03227ee766e1 336 SUPERFAMILY SSF81345 9 333 1.96E-69 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RPIC_RS13130 eed221b5389bfba5282e03227ee766e1 336 PANTHER PTHR30472 12 336 6.8E-82 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RPIC_RS13130 eed221b5389bfba5282e03227ee766e1 336 Pfam PF01032 FecCD transport family 23 333 8.8E-85 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 RPIC_RS13130 eed221b5389bfba5282e03227ee766e1 336 Gene3D G3DSA:1.10.3470.10 12 335 3.2E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like RPIC_RS06020 617f7530807cc693b00336ef4f403996 207 SUPERFAMILY SSF52218 1 168 2.42E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS06020 617f7530807cc693b00336ef4f403996 207 Gene3D G3DSA:3.40.50.360 1 175 7.5E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain RPIC_RS06020 617f7530807cc693b00336ef4f403996 207 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 2.5E-70 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 RPIC_RS06020 617f7530807cc693b00336ef4f403996 207 Pfam PF03358 NADPH-dependent FMN reductase 1 142 6.6E-34 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RPIC_RS06020 617f7530807cc693b00336ef4f403996 207 PANTHER PTHR30543 1 191 1.5E-34 T 22-04-2016 RPIC_RS12920 61c39bd3533ff20c26f95422b3539340 177 Pfam PF11000 Protein of unknown function (DUF2840) 28 174 3.6E-61 T 22-04-2016 IPR021263 Protein of unknown function DUF2840 RPIC_RS14765 88f9698537b71409eef491937637ea12 337 Pfam PF05035 2-keto-3-deoxy-galactonokinase 7 290 7.6E-41 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 RPIC_RS14765 88f9698537b71409eef491937637ea12 337 Gene3D G3DSA:3.30.420.40 1 72 5.6E-4 T 22-04-2016 RPIC_RS02595 65f230161f49f6badddb9a0596d538c5 222 SUPERFAMILY SSF159594 34 211 9.68E-23 T 22-04-2016 RPIC_RS02595 65f230161f49f6badddb9a0596d538c5 222 Gene3D G3DSA:3.40.50.10610 25 209 1.1E-15 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC_RS02595 65f230161f49f6badddb9a0596d538c5 222 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 37 205 9.6E-28 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 Gene3D G3DSA:3.40.50.1820 16 306 7.8E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PANTHER PTHR10992:SF757 206 311 2.0E-40 T 22-04-2016 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PANTHER PTHR10992:SF757 19 185 2.0E-40 T 22-04-2016 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 SUPERFAMILY SSF53474 6 306 1.28E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 Pfam PF00561 alpha/beta hydrolase fold 37 294 5.9E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 62 73 2.8E-10 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 36 44 2.8E-10 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 105 119 2.8E-10 T 22-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 119 132 1.6E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 59 74 1.6E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.6E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PANTHER PTHR10992 206 311 2.0E-40 T 22-04-2016 RPIC_RS12260 e98511ff1fe5c79c316bb8627c6bfb32 314 PANTHER PTHR10992 19 185 2.0E-40 T 22-04-2016 RPIC_RS18135 e625e858b44dbdf8eb623f262452102d 114 PANTHER PTHR37309 1 112 2.9E-29 T 22-04-2016 RPIC_RS18135 e625e858b44dbdf8eb623f262452102d 114 PANTHER PTHR37309:SF1 1 112 2.9E-29 T 22-04-2016 RPIC_RS18135 e625e858b44dbdf8eb623f262452102d 114 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 1.5E-31 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV RPIC_RS01465 60f8f8f12d0247befa3b868bf8ff00fe 153 SUPERFAMILY SSF54637 13 147 3.73E-15 T 22-04-2016 IPR029069 HotDog domain RPIC_RS01465 60f8f8f12d0247befa3b868bf8ff00fe 153 Gene3D G3DSA:3.10.129.10 6 145 4.5E-7 T 22-04-2016 IPR029069 HotDog domain RPIC_RS02880 3c1b790893cd1f745582a6f2c0502790 283 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 278 1.2E-81 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB RPIC_RS02880 3c1b790893cd1f745582a6f2c0502790 283 SMART SM00858 37 99 9.5E-13 T 22-04-2016 IPR013974 SAF domain RPIC_RS02880 3c1b790893cd1f745582a6f2c0502790 283 Pfam PF08666 SAF domain 38 98 1.2E-11 T 22-04-2016 IPR013974 SAF domain RPIC_RS02880 3c1b790893cd1f745582a6f2c0502790 283 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 105 214 2.3E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain RPIC_RS00045 1db211ef926011f8a396d08f67a432aa 319 SUPERFAMILY SSF49401 183 319 7.46E-22 T 22-04-2016 IPR008966 Adhesion domain RPIC_RS00045 1db211ef926011f8a396d08f67a432aa 319 Gene3D G3DSA:2.60.40.1090 182 319 6.4E-20 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC_RS00045 1db211ef926011f8a396d08f67a432aa 319 PANTHER PTHR33420:SF10 53 319 5.4E-36 T 22-04-2016 RPIC_RS00045 1db211ef926011f8a396d08f67a432aa 319 PANTHER PTHR33420 53 319 5.4E-36 T 22-04-2016 RPIC_RS00045 1db211ef926011f8a396d08f67a432aa 319 Pfam PF00419 Fimbrial protein 179 319 8.9E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 RPIC_RS16700 fa2ef46ac5862b49eb75863845fdc461 332 PANTHER PTHR30349:SF32 8 329 1.2E-75 T 22-04-2016 RPIC_RS16700 fa2ef46ac5862b49eb75863845fdc461 332 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 328 1.3E-79 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC_RS16700 fa2ef46ac5862b49eb75863845fdc461 332 PIRSF PIRSF017082 1 332 1.7E-74 T 22-04-2016 IPR005064 Bordetella uptake gene GO:0030288 RPIC_RS16700 fa2ef46ac5862b49eb75863845fdc461 332 PANTHER PTHR30349 8 329 1.2E-75 T 22-04-2016 RPIC_RS16700 fa2ef46ac5862b49eb75863845fdc461 332 SUPERFAMILY SSF53850 118 293 1.02E-6 T 22-04-2016 RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 PANTHER PTHR10108 113 305 3.1E-115 T 22-04-2016 RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 PANTHER PTHR10108 322 406 3.1E-115 T 22-04-2016 RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 Gene3D G3DSA:3.40.50.150 113 388 4.8E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 PIRSF PIRSF003085 5 406 2.4E-134 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 Pfam PF02353 Mycolic acid cyclopropane synthetase 115 384 6.0E-104 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 SUPERFAMILY SSF53335 123 389 1.95E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 PANTHER PTHR10108:SF743 113 305 3.1E-115 T 22-04-2016 RPIC_RS03505 72c8a68a57e8d0d13396a363f60f33ff 406 PANTHER PTHR10108:SF743 322 406 3.1E-115 T 22-04-2016 RPIC_RS10970 d98078bfb9053dd058efdd75153acf3b 146 Pfam PF12279 Protein of unknown function (DUF3619) 8 143 9.5E-46 T 22-04-2016 IPR022064 Protein of unknown function DUF3619 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF02913 FAD linked oxidases, C-terminal domain 461 575 3.4E-4 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF02913 FAD linked oxidases, C-terminal domain 727 815 3.2E-17 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF11880 Domain of unknown function (DUF3400) 1301 1345 8.0E-24 T 22-04-2016 IPR021817 Protein of unknown function DUF3400 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 SUPERFAMILY SSF55103 456 589 2.62E-37 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 SUPERFAMILY SSF55103 735 816 2.62E-37 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF12447 Protein of unknown function (DUF3683) 19 143 2.3E-53 T 22-04-2016 IPR022153 Protein of unknown function DUF3683 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF01565 FAD binding domain 193 338 1.3E-23 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 SUPERFAMILY SSF56176 157 424 7.94E-55 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 924 935 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF13183 4Fe-4S dicluster domain 860 938 6.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 PANTHER PTHR11748 385 483 3.5E-29 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 PANTHER PTHR11748 563 871 3.5E-29 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 PANTHER PTHR11748 166 341 3.5E-29 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 PANTHER PTHR11748:SF35 385 483 3.5E-29 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 PANTHER PTHR11748:SF35 563 871 3.5E-29 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 PANTHER PTHR11748:SF35 166 341 3.5E-29 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Gene3D G3DSA:1.10.1060.10 857 957 1.2E-13 T 22-04-2016 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Gene3D G3DSA:3.30.43.10 153 309 2.5E-31 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF02754 Cysteine-rich domain 1194 1297 0.023 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 Pfam PF02754 Cysteine-rich domain 1069 1158 7.0E-7 T 22-04-2016 IPR004017 Cysteine-rich domain RPIC_RS01610 09ad5bec407c5591b9f3b2bb9dfca366 1345 SUPERFAMILY SSF46548 831 955 3.14E-13 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 RPIC_RS14535 c1bd54ed40b3ae5c073c7d94be7d2d20 336 Pfam PF01699 Sodium/calcium exchanger protein 5 158 4.9E-14 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RPIC_RS14535 c1bd54ed40b3ae5c073c7d94be7d2d20 336 Pfam PF01699 Sodium/calcium exchanger protein 190 328 2.2E-11 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RPIC_RS08180 c1bd54ed40b3ae5c073c7d94be7d2d20 336 Pfam PF01699 Sodium/calcium exchanger protein 5 158 4.9E-14 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RPIC_RS08180 c1bd54ed40b3ae5c073c7d94be7d2d20 336 Pfam PF01699 Sodium/calcium exchanger protein 190 328 2.2E-11 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 RPIC_RS13720 47111f70fb70f1df89513c77e871b31a 255 Pfam PF01925 Sulfite exporter TauE/SafE 13 250 7.8E-35 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS13720 47111f70fb70f1df89513c77e871b31a 255 PANTHER PTHR30269 4 254 2.1E-52 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS13720 47111f70fb70f1df89513c77e871b31a 255 PANTHER PTHR30269:SF10 4 254 2.1E-52 T 22-04-2016 RPIC_RS18555 c2a6b38c95a71c36eac0be8430b812ac 296 Gene3D G3DSA:3.40.830.10 2 283 7.8E-91 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC_RS18555 c2a6b38c95a71c36eac0be8430b812ac 296 PANTHER PTHR30096 1 286 5.6E-96 T 22-04-2016 RPIC_RS18555 c2a6b38c95a71c36eac0be8430b812ac 296 PIRSF PIRSF006157 1 284 1.6E-96 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 RPIC_RS18555 c2a6b38c95a71c36eac0be8430b812ac 296 SUPERFAMILY SSF53213 1 283 5.49E-81 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC_RS18555 c2a6b38c95a71c36eac0be8430b812ac 296 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 282 2.7E-72 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 PANTHER PTHR11046:SF1 24 202 6.5E-107 T 22-04-2016 RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 Hamap MF_00045 Oligoribonuclease [orn]. 25 203 44.079 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 Pfam PF00929 Exonuclease 31 192 7.0E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 PANTHER PTHR11046 24 202 6.5E-107 T 22-04-2016 RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 SUPERFAMILY SSF53098 26 201 3.0E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 Gene3D G3DSA:3.30.420.10 26 201 1.8E-75 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS03985 526162affe2db5f69c9ede4f589405ad 219 SMART SM00479 29 202 7.4E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III RPIC_RS13905 d48946985e951d21eb486e25df34004e 207 SMART SM01207 12 193 8.7E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC_RS13905 d48946985e951d21eb486e25df34004e 207 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 192 5.6E-50 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC_RS13905 d48946985e951d21eb486e25df34004e 207 PANTHER PTHR30309 2 206 1.5E-70 T 22-04-2016 RPIC_RS13905 d48946985e951d21eb486e25df34004e 207 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 9 201 20.109 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC_RS13905 d48946985e951d21eb486e25df34004e 207 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 7 202 1.3E-57 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC_RS13905 d48946985e951d21eb486e25df34004e 207 PANTHER PTHR30309:SF0 2 206 1.5E-70 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 RPIC_RS01470 3e0ab0f5af57fe67241327059d77fdc7 267 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 38 199 2.9E-27 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal RPIC_RS01470 3e0ab0f5af57fe67241327059d77fdc7 267 SUPERFAMILY SSF53901 10 159 8.32E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 SUPERFAMILY SSF53756 60 433 1.78E-14 T 22-04-2016 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 Pfam PF00534 Glycosyl transferases group 1 344 412 2.3E-6 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 214 8.5E-62 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 PANTHER PTHR23417:SF2 195 436 1.2E-90 T 22-04-2016 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 PANTHER PTHR23417:SF2 1 116 1.2E-90 T 22-04-2016 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 PANTHER PTHR23417:SF2 135 145 1.2E-90 T 22-04-2016 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 PANTHER PTHR23417 195 436 1.2E-90 T 22-04-2016 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 PANTHER PTHR23417 1 116 1.2E-90 T 22-04-2016 RPIC_RS03135 dc37146c52e70dbbfc7c2243803af95f 438 PANTHER PTHR23417 135 145 1.2E-90 T 22-04-2016 RPIC_RS12235 49b98cc4a87365ebe14c9b192e10aa42 273 PANTHER PTHR38776 13 272 5.1E-16 T 22-04-2016 RPIC_RS12235 49b98cc4a87365ebe14c9b192e10aa42 273 Pfam PF06629 MltA-interacting protein MipA 51 272 2.8E-43 T 22-04-2016 IPR010583 MltA-interacting MipA RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 Gene3D G3DSA:1.10.287.110 3 67 8.9E-21 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 SMART SM00271 3 60 1.1E-17 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 SUPERFAMILY SSF46565 4 73 3.4E-21 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 Pfam PF00226 DnaJ domain 5 65 1.1E-18 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 PRINTS PR00625 DnaJ domain signature 40 60 2.2E-12 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 PRINTS PR00625 DnaJ domain signature 6 24 2.2E-12 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 PRINTS PR00625 DnaJ domain signature 24 39 2.2E-12 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 PANTHER PTHR24078:SF203 5 67 3.2E-18 T 22-04-2016 RPIC_RS11275 7b52d564eaa89078261e4a090b09dc21 125 PANTHER PTHR24078 5 67 3.2E-18 T 22-04-2016 RPIC_RS02820 fdbed0f9337491ac843ef86b30a2d2cf 357 SUPERFAMILY SSF161098 153 310 7.85E-5 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS02820 fdbed0f9337491ac843ef86b30a2d2cf 357 Pfam PF05987 Bacterial protein of unknown function (DUF898) 23 350 1.7E-111 T 22-04-2016 IPR010295 Protein of unknown function DUF898 RPIC_RS24160 f4f7b234d6f061eae145dc76c419d3e9 240 PANTHER PTHR10366:SF32 27 240 2.0E-125 T 22-04-2016 RPIC_RS24160 f4f7b234d6f061eae145dc76c419d3e9 240 PANTHER PTHR10366 27 240 2.0E-125 T 22-04-2016 RPIC_RS24160 f4f7b234d6f061eae145dc76c419d3e9 240 SUPERFAMILY SSF51735 27 239 4.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS24160 f4f7b234d6f061eae145dc76c419d3e9 240 Pfam PF16363 GDP-mannose 4,6 dehydratase 29 240 2.9E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS24160 f4f7b234d6f061eae145dc76c419d3e9 240 Gene3D G3DSA:3.40.50.720 26 239 2.0E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS12265 9edbea220cca33188763ee67612eaf5e 24 Pfam PF08042 PqqA family 2 20 1.6E-11 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 RPIC_RS12265 9edbea220cca33188763ee67612eaf5e 24 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 2 24 11.767 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 RPIC_RS12265 9edbea220cca33188763ee67612eaf5e 24 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 3 23 1.6E-13 T 22-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 RPIC_RS16750 1bcf680a4896e714b65d914603c2e7c5 231 Gene3D G3DSA:3.40.630.30 33 169 2.9E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS16750 1bcf680a4896e714b65d914603c2e7c5 231 Pfam PF00583 Acetyltransferase (GNAT) family 97 168 4.2E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS16750 1bcf680a4896e714b65d914603c2e7c5 231 SUPERFAMILY SSF55729 32 170 4.08E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS14325 f0fe92e062bf35c50d85e446221878c1 131 PANTHER PTHR33993 1 121 9.8E-37 T 22-04-2016 RPIC_RS14325 f0fe92e062bf35c50d85e446221878c1 131 Gene3D G3DSA:3.10.180.10 5 121 1.7E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS14325 f0fe92e062bf35c50d85e446221878c1 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.3E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RPIC_RS14325 f0fe92e062bf35c50d85e446221878c1 131 PANTHER PTHR33993:SF4 1 121 9.8E-37 T 22-04-2016 RPIC_RS14325 f0fe92e062bf35c50d85e446221878c1 131 SUPERFAMILY SSF54593 3 121 6.6E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 SUPERFAMILY SSF54909 73 158 1.15E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 SMART SM00344 11 120 1.4E-46 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 PANTHER PTHR30154:SF0 3 162 2.9E-80 T 22-04-2016 RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 Gene3D G3DSA:1.10.10.10 12 63 8.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 Gene3D G3DSA:3.30.70.920 64 159 7.1E-32 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 57 5.3E-19 T 22-04-2016 RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 2.2E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 6.4E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 6.4E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 6.4E-19 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 SUPERFAMILY SSF46785 10 70 5.66E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS03905 2385411d442f29c2cbc3b314d8506d85 165 PANTHER PTHR30154 3 162 2.9E-80 T 22-04-2016 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 PANTHER PTHR30055 29 236 1.5E-31 T 22-04-2016 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 90 8.0E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 ProSitePatterns PS01081 TetR-type HTH domain signature. 58 88 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 59 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 67 90 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 SUPERFAMILY SSF46689 34 118 1.69E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 Gene3D G3DSA:1.10.357.10 32 224 1.8E-36 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 RPIC_RS11880 f37fc3f174bf3bc35c1c940931bff2e4 236 SUPERFAMILY SSF48498 113 224 2.52E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal RPIC_RS12185 67a2224c3cb98019f67ce9ededf9820f 491 Pfam PF16963 PelD GGDEF domain 363 487 1.7E-47 T 22-04-2016 IPR031583 PelD, GGDEF domain RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 Pfam PF03840 Preprotein translocase SecG subunit 7 76 1.3E-20 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 4.5E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 4.5E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 4.5E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 4.5E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 2.9E-25 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RPIC_RS10895 8f7ceb4eb2d02d0f5c7370c3550c394c 120 PANTHER PTHR34182 6 118 1.3E-22 T 22-04-2016 RPIC_RS17485 b66df276f91542bffd9dde898e9ceb30 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 3.2E-31 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor RPIC_RS17485 b66df276f91542bffd9dde898e9ceb30 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 69 4.0E-26 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor RPIC_RS17485 b66df276f91542bffd9dde898e9ceb30 71 PANTHER PTHR40613 1 71 1.2E-22 T 22-04-2016 RPIC_RS17485 b66df276f91542bffd9dde898e9ceb30 71 PANTHER PTHR40613:SF1 1 71 1.2E-22 T 22-04-2016 RPIC_RS12425 55aee01f20cd951b5a1ec3b617f51fd8 159 PANTHER PTHR24559:SF185 10 159 1.6E-41 T 22-04-2016 RPIC_RS12425 55aee01f20cd951b5a1ec3b617f51fd8 159 PANTHER PTHR24559 10 159 1.6E-41 T 22-04-2016 RPIC_RS12425 55aee01f20cd951b5a1ec3b617f51fd8 159 Gene3D G3DSA:3.30.420.10 9 159 6.2E-38 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS12425 55aee01f20cd951b5a1ec3b617f51fd8 159 SUPERFAMILY SSF53098 9 159 3.67E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 RPIC_RS12425 55aee01f20cd951b5a1ec3b617f51fd8 159 Pfam PF13683 Integrase core domain 99 159 1.0E-25 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 RPIC_RS09525 29aea614b74e1479b34f6efb0eaa5ddc 147 PANTHER PTHR31793 4 144 3.3E-62 T 22-04-2016 RPIC_RS09525 29aea614b74e1479b34f6efb0eaa5ddc 147 Gene3D G3DSA:3.10.129.10 4 142 5.3E-55 T 22-04-2016 IPR029069 HotDog domain RPIC_RS09525 29aea614b74e1479b34f6efb0eaa5ddc 147 PANTHER PTHR31793:SF7 4 144 3.3E-62 T 22-04-2016 RPIC_RS09525 29aea614b74e1479b34f6efb0eaa5ddc 147 SUPERFAMILY SSF54637 7 141 8.06E-41 T 22-04-2016 IPR029069 HotDog domain RPIC_RS09525 29aea614b74e1479b34f6efb0eaa5ddc 147 Pfam PF03061 Thioesterase superfamily 27 106 7.0E-15 T 22-04-2016 IPR006683 Thioesterase domain RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 Gene3D G3DSA:3.20.20.60 9 406 1.3E-164 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 PANTHER PTHR21631 1 423 2.9E-168 T 22-04-2016 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 247 2.1E-108 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 PIRSF PIRSF001362 1 426 7.9E-235 T 22-04-2016 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 SUPERFAMILY SSF51621 8 423 7.18E-158 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 ProSitePatterns PS00161 Isocitrate lyase signature. 185 190 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 Pfam PF00463 Isocitrate lyase family 7 247 8.3E-61 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC_RS06120 8eff8088a1336d957099299e381906f4 434 Pfam PF00463 Isocitrate lyase family 248 420 2.2E-42 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 RPIC_RS09685 bc4383fd2f6523085a706c051a676265 143 Gene3D G3DSA:1.10.1660.10 18 89 2.4E-17 T 22-04-2016 RPIC_RS09685 bc4383fd2f6523085a706c051a676265 143 PANTHER PTHR30204 13 90 6.7E-27 T 22-04-2016 RPIC_RS09685 bc4383fd2f6523085a706c051a676265 143 PANTHER PTHR30204:SF15 13 90 6.7E-27 T 22-04-2016 RPIC_RS09685 bc4383fd2f6523085a706c051a676265 143 SUPERFAMILY SSF46955 19 95 8.7E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS09685 bc4383fd2f6523085a706c051a676265 143 SMART SM00422 21 91 4.7E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS09685 bc4383fd2f6523085a706c051a676265 143 Pfam PF13411 MerR HTH family regulatory protein 21 90 2.0E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS05835 91f6c938877342b244dfaaa6c55e0484 131 Gene3D G3DSA:3.10.450.50 35 127 3.2E-5 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS05835 91f6c938877342b244dfaaa6c55e0484 131 SUPERFAMILY SSF54427 14 126 1.63E-9 T 22-04-2016 IPR032710 NTF2-like domain RPIC_RS12620 0b61c047a96f2ea3286cd0697d1c8de6 410 Gene3D G3DSA:3.40.630.30 203 356 5.7E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS12620 0b61c047a96f2ea3286cd0697d1c8de6 410 SUPERFAMILY SSF55729 212 384 9.8E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS12620 0b61c047a96f2ea3286cd0697d1c8de6 410 PANTHER PTHR31384 64 332 4.3E-50 T 22-04-2016 RPIC_RS12620 0b61c047a96f2ea3286cd0697d1c8de6 410 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 31 405 5.8E-153 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition RPIC_RS16960 5e2bf016913e0332a1e3b450c603e8fa 456 Pfam PF13520 Amino acid permease 26 421 4.9E-32 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS16960 5e2bf016913e0332a1e3b450c603e8fa 456 PIRSF PIRSF006060 1 455 4.1E-55 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS16960 5e2bf016913e0332a1e3b450c603e8fa 456 PANTHER PTHR11785 11 441 4.4E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS05100 5174d79682324cf1938c92cf92cbc7ac 288 PANTHER PTHR30164 1 282 1.1E-72 T 22-04-2016 RPIC_RS05100 5174d79682324cf1938c92cf92cbc7ac 288 Pfam PF06167 Glucose-regulated metallo-peptidase M90 12 268 1.2E-88 T 22-04-2016 IPR010384 MtfA family RPIC_RS05100 5174d79682324cf1938c92cf92cbc7ac 288 Gene3D G3DSA:3.40.390.10 45 268 1.8E-33 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 RPIC_RS05100 5174d79682324cf1938c92cf92cbc7ac 288 SUPERFAMILY SSF55486 48 270 8.79E-38 T 22-04-2016 RPIC_RS07325 2cc52e53bb4f05ba6665d934b2e741b2 186 Pfam PF06778 Chlorite dismutase 39 179 1.4E-9 T 22-04-2016 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase RPIC_RS07325 2cc52e53bb4f05ba6665d934b2e741b2 186 Gene3D G3DSA:3.30.70.1100 88 180 7.3E-7 T 22-04-2016 RPIC_RS07325 2cc52e53bb4f05ba6665d934b2e741b2 186 SUPERFAMILY SSF54909 42 181 1.39E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS09095 2cc52e53bb4f05ba6665d934b2e741b2 186 Pfam PF06778 Chlorite dismutase 39 179 1.4E-9 T 22-04-2016 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase RPIC_RS09095 2cc52e53bb4f05ba6665d934b2e741b2 186 Gene3D G3DSA:3.30.70.1100 88 180 7.3E-7 T 22-04-2016 RPIC_RS09095 2cc52e53bb4f05ba6665d934b2e741b2 186 SUPERFAMILY SSF54909 42 181 1.39E-18 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel RPIC_RS05430 71a6a5561f5ecc9a431d23d223eccf6f 438 PANTHER PTHR30061 6 437 5.6E-155 T 22-04-2016 RPIC_RS05430 71a6a5561f5ecc9a431d23d223eccf6f 438 Gene3D G3DSA:3.40.190.10 147 356 3.6E-41 T 22-04-2016 RPIC_RS05430 71a6a5561f5ecc9a431d23d223eccf6f 438 PANTHER PTHR30061:SF7 6 437 5.6E-155 T 22-04-2016 RPIC_RS05430 71a6a5561f5ecc9a431d23d223eccf6f 438 SUPERFAMILY SSF53850 26 424 6.73E-76 T 22-04-2016 RPIC_RS05430 71a6a5561f5ecc9a431d23d223eccf6f 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 368 4.6E-43 T 22-04-2016 RPIC_RS12630 b060ab6d48385725afaacab6fda65d1d 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC_RS12630 b060ab6d48385725afaacab6fda65d1d 175 PANTHER PTHR10286 3 175 4.3E-70 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC_RS12630 b060ab6d48385725afaacab6fda65d1d 175 SUPERFAMILY SSF50324 3 175 1.7E-68 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC_RS12630 b060ab6d48385725afaacab6fda65d1d 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.783 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC_RS12630 b060ab6d48385725afaacab6fda65d1d 175 Gene3D G3DSA:3.90.80.10 3 175 1.7E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC_RS12630 b060ab6d48385725afaacab6fda65d1d 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 1.6E-52 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 RPIC_RS17030 42cc44a2b26403dd92dd51aacccf7a69 324 Pfam PF07859 alpha/beta hydrolase fold 85 290 1.6E-30 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RPIC_RS17030 42cc44a2b26403dd92dd51aacccf7a69 324 SUPERFAMILY SSF53474 23 322 1.47E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17030 42cc44a2b26403dd92dd51aacccf7a69 324 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 156 168 - T 22-04-2016 IPR033140 Lipase, GDXG, putative serine active site RPIC_RS17030 42cc44a2b26403dd92dd51aacccf7a69 324 Gene3D G3DSA:3.40.50.1820 58 323 1.2E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS17030 42cc44a2b26403dd92dd51aacccf7a69 324 PANTHER PTHR23024 60 290 6.3E-39 T 22-04-2016 RPIC_RS07230 a8026e2d145bd4e543dd8b6c6a1dcbb4 265 SUPERFAMILY SSF109998 26 159 4.71E-16 T 22-04-2016 IPR027304 Trigger factor/SurA domain RPIC_RS07230 a8026e2d145bd4e543dd8b6c6a1dcbb4 265 Pfam PF00639 PPIC-type PPIASE domain 142 219 2.4E-22 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RPIC_RS07230 a8026e2d145bd4e543dd8b6c6a1dcbb4 265 Gene3D G3DSA:3.10.50.40 123 242 8.5E-41 T 22-04-2016 RPIC_RS07230 a8026e2d145bd4e543dd8b6c6a1dcbb4 265 PANTHER PTHR10657 5 265 3.3E-38 T 22-04-2016 RPIC_RS07230 a8026e2d145bd4e543dd8b6c6a1dcbb4 265 SUPERFAMILY SSF54534 130 220 1.05E-28 T 22-04-2016 RPIC_RS07230 a8026e2d145bd4e543dd8b6c6a1dcbb4 265 PANTHER PTHR10657:SF11 5 265 3.3E-38 T 22-04-2016 RPIC_RS12430 b7e3c418d061842e6ca8f162e7f13c3f 217 PANTHER PTHR30506:SF3 9 213 3.5E-65 T 22-04-2016 RPIC_RS12430 b7e3c418d061842e6ca8f162e7f13c3f 217 Pfam PF03458 UPF0126 domain 17 90 8.4E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RPIC_RS12430 b7e3c418d061842e6ca8f162e7f13c3f 217 Pfam PF03458 UPF0126 domain 103 174 4.8E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 RPIC_RS12430 b7e3c418d061842e6ca8f162e7f13c3f 217 PANTHER PTHR30506 9 213 3.5E-65 T 22-04-2016 RPIC_RS00950 9402e7b1632bab911e08d3ceb022f8bf 85 PANTHER PTHR38040 1 84 1.6E-21 T 22-04-2016 RPIC_RS00950 9402e7b1632bab911e08d3ceb022f8bf 85 Pfam PF04380 Membrane fusogenic activity 1 75 5.6E-31 T 22-04-2016 IPR007475 Membrane fusogenic activity RPIC_RS00950 9402e7b1632bab911e08d3ceb022f8bf 85 PANTHER PTHR38040:SF1 1 84 1.6E-21 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 Gene3D G3DSA:3.40.190.10 160 300 8.1E-54 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 PANTHER PTHR30006 40 380 3.7E-71 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 Pfam PF13531 Bacterial extracellular solute-binding protein 62 321 2.3E-12 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 PANTHER PTHR30006:SF10 40 380 3.7E-71 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 Gene3D G3DSA:3.40.190.10 301 374 2.9E-58 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 Gene3D G3DSA:3.40.190.10 9 159 2.9E-58 T 22-04-2016 RPIC_RS15850 91af87c69ad1368212c55f6b6d882e43 380 SUPERFAMILY SSF53850 59 374 2.99E-46 T 22-04-2016 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 PANTHER PTHR30004:SF6 1 340 2.5E-145 T 22-04-2016 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 PANTHER PTHR30004 1 340 2.5E-145 T 22-04-2016 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 328 1.6E-111 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 324 7.9E-105 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 34.876 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 SUPERFAMILY SSF53659 5 330 1.52E-109 T 22-04-2016 RPIC_RS02750 4000db4c0cd87a3f8cd7bce0623d6862 340 Gene3D G3DSA:3.40.718.10 3 328 7.9E-130 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 RPIC_RS06145 b27753125a6159a76400246aa89d0983 156 SUPERFAMILY SSF55961 2 151 3.3E-48 T 22-04-2016 RPIC_RS06145 b27753125a6159a76400246aa89d0983 156 Gene3D G3DSA:3.30.530.20 2 155 1.0E-59 T 22-04-2016 IPR023393 START-like domain RPIC_RS06145 b27753125a6159a76400246aa89d0983 156 Pfam PF08982 Domain of unknown function (DUF1857) 8 153 1.7E-32 T 22-04-2016 IPR015075 Protein of unknown function DUF1857 RPIC_RS07305 ea5227552178df99087674638e535fc0 1009 Pfam PF13700 Domain of unknown function (DUF4158) 11 173 5.8E-41 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RPIC_RS07305 ea5227552178df99087674638e535fc0 1009 Pfam PF01526 Tn3 transposase DDE domain 596 988 3.4E-112 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RPIC_RS09075 ea5227552178df99087674638e535fc0 1009 Pfam PF13700 Domain of unknown function (DUF4158) 11 173 5.8E-41 T 22-04-2016 IPR025296 Domain of unknown function DUF4158 RPIC_RS09075 ea5227552178df99087674638e535fc0 1009 Pfam PF01526 Tn3 transposase DDE domain 596 988 3.4E-112 T 22-04-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 RPIC_RS08325 7eb0b0dab6f21e9228d52c6d2605f3fa 394 Pfam PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) 7 389 1.9E-127 T 22-04-2016 IPR027790 S-adenosylmethionine synthase KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|UniPathway: UPA00315 RPIC_RS08325 7eb0b0dab6f21e9228d52c6d2605f3fa 394 PANTHER PTHR36697:SF1 6 394 1.3E-128 T 22-04-2016 RPIC_RS08325 7eb0b0dab6f21e9228d52c6d2605f3fa 394 PANTHER PTHR36697 6 394 1.3E-128 T 22-04-2016 RPIC_RS08325 7eb0b0dab6f21e9228d52c6d2605f3fa 394 ProDom PD011777 SYNTHETASE TRANSFERASE METHIONINE ADENOSYLTRANSFERASE S-ADENOSYLMETHIONINE NUCLEOTIDE-BINDING METABOLISM ATP-BINDING MAGNESIUM ONE-CARBON 1 394 2.0E-149 T 22-04-2016 RPIC_RS05375 ce6b1ac9b16a24e7287efc93504f875e 277 SUPERFAMILY SSF88713 34 261 2.0E-37 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS05375 ce6b1ac9b16a24e7287efc93504f875e 277 Gene3D G3DSA:3.20.20.370 34 259 2.7E-40 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS05375 ce6b1ac9b16a24e7287efc93504f875e 277 Pfam PF01522 Polysaccharide deacetylase 36 184 2.6E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS12395 2f31a8cf2fc2108734a4ddf149bb77b6 428 Pfam PF07690 Major Facilitator Superfamily 29 377 7.6E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS12395 2f31a8cf2fc2108734a4ddf149bb77b6 428 PANTHER PTHR23515 16 410 6.4E-68 T 22-04-2016 RPIC_RS12395 2f31a8cf2fc2108734a4ddf149bb77b6 428 Gene3D G3DSA:1.20.1250.20 216 410 1.1E-23 T 22-04-2016 RPIC_RS12395 2f31a8cf2fc2108734a4ddf149bb77b6 428 SUPERFAMILY SSF103473 14 412 9.81E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS12395 2f31a8cf2fc2108734a4ddf149bb77b6 428 Gene3D G3DSA:1.20.1250.20 21 198 2.0E-23 T 22-04-2016 RPIC_RS07405 ae8436f5489d30d18c3733c6d87b22f3 281 Pfam PF11740 Plasmid replication region DNA-binding N-term 3 108 3.2E-10 T 22-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain RPIC_RS06580 9e9876e264e94b54ffae55c3767eebcc 275 SUPERFAMILY SSF51621 7 261 6.28E-61 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS06580 9e9876e264e94b54ffae55c3767eebcc 275 Gene3D G3DSA:3.20.20.60 3 231 9.2E-61 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RPIC_RS06580 9e9876e264e94b54ffae55c3767eebcc 275 PANTHER PTHR21631:SF18 4 259 1.5E-76 T 22-04-2016 RPIC_RS06580 9e9876e264e94b54ffae55c3767eebcc 275 PANTHER PTHR21631 4 259 1.5E-76 T 22-04-2016 RPIC_RS06580 9e9876e264e94b54ffae55c3767eebcc 275 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 249 5.1E-69 T 22-04-2016 RPIC_RS12410 0572c2c81ef4503cfd9c558b0cfd4c4f 242 Pfam PF02613 Nitrate reductase delta subunit 47 163 3.4E-14 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC_RS12410 0572c2c81ef4503cfd9c558b0cfd4c4f 242 PANTHER PTHR30598 5 229 2.3E-49 T 22-04-2016 RPIC_RS12410 0572c2c81ef4503cfd9c558b0cfd4c4f 242 PANTHER PTHR30598:SF1 5 229 2.3E-49 T 22-04-2016 RPIC_RS12410 0572c2c81ef4503cfd9c558b0cfd4c4f 242 SUPERFAMILY SSF89155 12 171 7.19E-32 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC_RS12410 0572c2c81ef4503cfd9c558b0cfd4c4f 242 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 17 170 5.3E-38 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RPIC_RS12410 0572c2c81ef4503cfd9c558b0cfd4c4f 242 Gene3D G3DSA:1.10.3480.10 58 147 6.4E-6 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 Gene3D G3DSA:1.10.287.310 1 60 1.1E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 PANTHER PTHR10916 1 60 3.5E-21 T 22-04-2016 RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 SUPERFAMILY SSF46561 1 60 2.22E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 Pfam PF00831 Ribosomal L29 protein 4 60 1.9E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.7E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16240 bf00a250bf195027c9b3925c6f9a969a 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.554 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS07900 ee985eb5f4360d6ce95e9f2cdba55dc3 213 Pfam PF09436 Domain of unknown function (DUF2016) 4 75 3.5E-29 T 22-04-2016 IPR018560 Domain of unknown function DUF2016 RPIC_RS07900 ee985eb5f4360d6ce95e9f2cdba55dc3 213 Pfam PF14464 Prokaryotic homologs of the JAB domain 82 176 6.8E-15 T 22-04-2016 IPR028090 JAB domain, prokaryotic RPIC_RS07900 ee985eb5f4360d6ce95e9f2cdba55dc3 213 TIGRFAM TIGR03735 PRTRC_A: PRTRC system protein A 5 195 1.1E-74 T 22-04-2016 IPR022499 ParB-related, ThiF-related cassette, protein A RPIC_RS10150 875ce865b37b8b4c605644fbd724b36f 323 Pfam PF00682 HMGL-like 11 282 5.0E-44 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 RPIC_RS10150 875ce865b37b8b4c605644fbd724b36f 323 SUPERFAMILY SSF51569 5 288 2.2E-65 T 22-04-2016 RPIC_RS10150 875ce865b37b8b4c605644fbd724b36f 323 PANTHER PTHR10277:SF44 11 288 3.6E-101 T 22-04-2016 RPIC_RS10150 875ce865b37b8b4c605644fbd724b36f 323 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 RPIC_RS10150 875ce865b37b8b4c605644fbd724b36f 323 PANTHER PTHR10277 11 288 3.6E-101 T 22-04-2016 RPIC_RS10150 875ce865b37b8b4c605644fbd724b36f 323 Gene3D G3DSA:3.20.20.70 10 288 9.3E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS14450 e23f586e4ae31fa70bdd4bf0c6b0255c 301 Pfam PF05621 Bacterial TniB protein 26 279 4.2E-92 T 22-04-2016 IPR008868 Bacterial TniB RPIC_RS14450 e23f586e4ae31fa70bdd4bf0c6b0255c 301 Gene3D G3DSA:3.40.50.300 24 213 4.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS14450 e23f586e4ae31fa70bdd4bf0c6b0255c 301 SUPERFAMILY SSF52540 34 281 1.37E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08265 e23f586e4ae31fa70bdd4bf0c6b0255c 301 Pfam PF05621 Bacterial TniB protein 26 279 4.2E-92 T 22-04-2016 IPR008868 Bacterial TniB RPIC_RS08265 e23f586e4ae31fa70bdd4bf0c6b0255c 301 Gene3D G3DSA:3.40.50.300 24 213 4.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08265 e23f586e4ae31fa70bdd4bf0c6b0255c 301 SUPERFAMILY SSF52540 34 281 1.37E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS17110 323fa04e0334f8b558d3a8eb42060ef1 266 PIRSF PIRSF038455 2 266 8.5E-69 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RPIC_RS17110 323fa04e0334f8b558d3a8eb42060ef1 266 SUPERFAMILY SSF46626 29 146 5.56E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17110 323fa04e0334f8b558d3a8eb42060ef1 266 Gene3D G3DSA:1.10.760.10 73 265 2.3E-55 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS17110 323fa04e0334f8b558d3a8eb42060ef1 266 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 40 266 4.5E-74 T 22-04-2016 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 RPIC_RS17110 323fa04e0334f8b558d3a8eb42060ef1 266 SUPERFAMILY SSF46626 151 265 1.42E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS10790 2213dab377c36e7b2e746ece771a4733 161 PANTHER PTHR13078 16 159 8.5E-42 T 22-04-2016 RPIC_RS10790 2213dab377c36e7b2e746ece771a4733 161 Pfam PF01575 MaoC like domain 24 124 1.0E-19 T 22-04-2016 IPR002539 MaoC-like domain RPIC_RS10790 2213dab377c36e7b2e746ece771a4733 161 Gene3D G3DSA:3.10.129.10 14 159 3.2E-45 T 22-04-2016 IPR029069 HotDog domain RPIC_RS10790 2213dab377c36e7b2e746ece771a4733 161 SUPERFAMILY SSF54637 14 159 7.8E-41 T 22-04-2016 IPR029069 HotDog domain RPIC_RS07890 358b0a0255d83faf810eb5cd34359967 378 TIGRFAM TIGR03742 PRTRC_F: PRTRC system protein F 36 377 3.3E-63 T 22-04-2016 IPR022283 ParB-related, ThiF-related cassette, protein F RPIC_RS07890 358b0a0255d83faf810eb5cd34359967 378 Pfam PF14456 Alpha-helical domain 2 85 377 2.9E-41 T 22-04-2016 RPIC_RS09290 5b94992c5f1c35c637a33bedb36c524f 277 PANTHER PTHR31480 19 276 3.8E-29 T 22-04-2016 RPIC_RS09290 5b94992c5f1c35c637a33bedb36c524f 277 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 275 4.2E-97 T 22-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 RPIC_RS09290 5b94992c5f1c35c637a33bedb36c524f 277 SUPERFAMILY SSF48576 4 276 2.01E-60 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC_RS09290 5b94992c5f1c35c637a33bedb36c524f 277 Gene3D G3DSA:1.10.600.10 18 276 2.2E-55 T 22-04-2016 IPR008949 Isoprenoid synthase domain RPIC_RS09290 5b94992c5f1c35c637a33bedb36c524f 277 Pfam PF00494 Squalene/phytoene synthase 16 264 1.4E-54 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RPIC_RS03635 6e67cd4548b25a9f9522bf82a1b0c828 161 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 18 153 8.9E-19 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 RPIC_RS04885 c99de92d89b056582d215699e8b11a9a 261 Pfam PF12706 Beta-lactamase superfamily domain 28 211 3.1E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04885 c99de92d89b056582d215699e8b11a9a 261 Gene3D G3DSA:3.60.15.10 11 234 1.6E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04885 c99de92d89b056582d215699e8b11a9a 261 PANTHER PTHR13754:SF15 3 232 8.4E-55 T 22-04-2016 RPIC_RS04885 c99de92d89b056582d215699e8b11a9a 261 PANTHER PTHR13754 3 232 8.4E-55 T 22-04-2016 RPIC_RS04885 c99de92d89b056582d215699e8b11a9a 261 SUPERFAMILY SSF56281 5 237 1.57E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS04885 c99de92d89b056582d215699e8b11a9a 261 SMART SM00849 13 172 1.9E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS03825 9e912225beaad379a4c04da4b6f8fd24 107 Pfam PF06305 Protein of unknown function (DUF1049) 23 83 2.5E-14 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 RPIC_RS01090 302020fb524a579cfb3f7f047dabf598 256 Pfam PF02104 SURF1 family 22 232 1.3E-27 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 RPIC_RS12390 b72b4b0d9aae20e7bf5f8131f108d972 111 SUPERFAMILY SSF51182 8 104 4.55E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS12390 b72b4b0d9aae20e7bf5f8131f108d972 111 Gene3D G3DSA:2.60.120.10 29 108 2.0E-19 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS12390 b72b4b0d9aae20e7bf5f8131f108d972 111 Pfam PF07883 Cupin domain 40 101 1.1E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS01480 b79c5abad80c04ff43f001be7bd3d566 287 Pfam PF01522 Polysaccharide deacetylase 79 198 1.8E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS01480 b79c5abad80c04ff43f001be7bd3d566 287 SUPERFAMILY SSF88713 55 271 2.67E-51 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RPIC_RS01480 b79c5abad80c04ff43f001be7bd3d566 287 Gene3D G3DSA:3.20.20.370 70 274 2.1E-47 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 RPIC_RS01480 b79c5abad80c04ff43f001be7bd3d566 287 PANTHER PTHR10587 36 238 7.6E-38 T 22-04-2016 RPIC_RS20295 20c9c40eaa5cc6dc41afc58b915db666 120 Gene3D G3DSA:3.90.226.10 12 120 2.6E-12 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS20295 20c9c40eaa5cc6dc41afc58b915db666 120 SUPERFAMILY SSF52096 12 120 1.58E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS00490 66af9dee3c2ce5a903017eeb59eb7016 590 PANTHER PTHR13943:SF48 42 116 1.2E-172 T 22-04-2016 RPIC_RS00490 66af9dee3c2ce5a903017eeb59eb7016 590 PANTHER PTHR13943:SF48 139 578 1.2E-172 T 22-04-2016 RPIC_RS00490 66af9dee3c2ce5a903017eeb59eb7016 590 Pfam PF07287 Protein of unknown function (DUF1446) 8 348 6.6E-122 T 22-04-2016 IPR010839 Protein of unknown function DUF1446 RPIC_RS00490 66af9dee3c2ce5a903017eeb59eb7016 590 PANTHER PTHR13943 42 116 1.2E-172 T 22-04-2016 RPIC_RS00490 66af9dee3c2ce5a903017eeb59eb7016 590 PANTHER PTHR13943 139 578 1.2E-172 T 22-04-2016 RPIC_RS15065 c35817191aa6fd9a148444e83ceb9a96 197 Pfam PF01914 MarC family integral membrane protein 5 192 6.7E-52 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC_RS15065 c35817191aa6fd9a148444e83ceb9a96 197 PANTHER PTHR33508 1 193 1.7E-71 T 22-04-2016 RPIC_RS15065 c35817191aa6fd9a148444e83ceb9a96 197 PANTHER PTHR33508:SF4 1 193 1.7E-71 T 22-04-2016 RPIC_RS15065 c35817191aa6fd9a148444e83ceb9a96 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 190 7.4E-34 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 RPIC_RS01080 eb18854f5e78c433d8e69db69eca6623 286 SUPERFAMILY SSF81452 8 286 2.88E-81 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC_RS01080 eb18854f5e78c433d8e69db69eca6623 286 PANTHER PTHR11403 2 286 1.9E-97 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 RPIC_RS01080 eb18854f5e78c433d8e69db69eca6623 286 Gene3D G3DSA:1.20.120.80 78 286 3.2E-66 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 RPIC_RS01080 eb18854f5e78c433d8e69db69eca6623 286 Pfam PF00510 Cytochrome c oxidase subunit III 11 285 1.3E-60 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 RPIC_RS01080 eb18854f5e78c433d8e69db69eca6623 286 PANTHER PTHR11403:SF0 2 286 1.9E-97 T 22-04-2016 RPIC_RS01080 eb18854f5e78c433d8e69db69eca6623 286 Gene3D G3DSA:1.10.287.70 7 73 1.0E-14 T 22-04-2016 RPIC_RS02835 e20a8b593a2915d88f97cc3846992c54 414 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 11 58 2.6E-13 T 22-04-2016 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal RPIC_RS13185 4e5ee60fc82b9bb1f71e4d37c7aa0f84 141 Pfam PF10667 Protein of unknown function (DUF2486) 33 135 1.1E-4 T 22-04-2016 IPR018924 Protein of unknown function DUF2486 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 Gene3D G3DSA:2.40.230.10 214 431 5.3E-60 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 SUPERFAMILY SSF56931 195 430 4.18E-60 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 PANTHER PTHR40457 218 418 5.3E-22 T 22-04-2016 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 Pfam PF02253 Phospholipase A1 215 428 1.6E-40 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 211 228 1.0E-14 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 340 358 1.0E-14 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 401 421 1.0E-14 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS14145 9ab14b9720456e75ab3c82ec6b7da892 431 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 277 1.0E-14 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 RPIC_RS05765 618d164f6fb096f0463e9c9292e88574 361 Gene3D G3DSA:3.40.50.2000 181 293 4.5E-10 T 22-04-2016 RPIC_RS05765 618d164f6fb096f0463e9c9292e88574 361 PANTHER PTHR12526 89 361 2.7E-27 T 22-04-2016 RPIC_RS05765 618d164f6fb096f0463e9c9292e88574 361 PANTHER PTHR12526:SF399 89 361 2.7E-27 T 22-04-2016 RPIC_RS05765 618d164f6fb096f0463e9c9292e88574 361 SUPERFAMILY SSF53756 50 360 5.18E-38 T 22-04-2016 RPIC_RS05765 618d164f6fb096f0463e9c9292e88574 361 Pfam PF13692 Glycosyl transferases group 1 183 308 1.9E-13 T 22-04-2016 RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 SUPERFAMILY SSF53335 157 419 1.55E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 PIRSF PIRSF003085 15 438 1.4E-126 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 Gene3D G3DSA:3.40.50.150 145 419 1.7E-91 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 PANTHER PTHR10108:SF743 78 337 2.1E-110 T 22-04-2016 RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 PANTHER PTHR10108:SF743 354 438 2.1E-110 T 22-04-2016 RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 PANTHER PTHR10108 78 337 2.1E-110 T 22-04-2016 RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 PANTHER PTHR10108 354 438 2.1E-110 T 22-04-2016 RPIC_RS08405 2418d3da4058a97e851cdf78dbec865d 447 Pfam PF02353 Mycolic acid cyclopropane synthetase 146 417 2.6E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS15405 1b3b4b993240fe1caad0498251d0d5ea 124 SUPERFAMILY SSF110069 5 124 1.14E-49 T 22-04-2016 IPR007474 ApaG domain RPIC_RS15405 1b3b4b993240fe1caad0498251d0d5ea 124 PANTHER PTHR14289 7 121 1.4E-45 T 22-04-2016 RPIC_RS15405 1b3b4b993240fe1caad0498251d0d5ea 124 Pfam PF04379 Protein of unknown function (DUF525) 16 101 2.9E-35 T 22-04-2016 IPR007474 ApaG domain RPIC_RS15405 1b3b4b993240fe1caad0498251d0d5ea 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 32.529 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG RPIC_RS15405 1b3b4b993240fe1caad0498251d0d5ea 124 Gene3D G3DSA:2.60.40.1470 5 124 9.3E-48 T 22-04-2016 IPR007474 ApaG domain RPIC_RS13240 e5937447b3934dbb1cd054bbe09e3fc0 182 PIRSF PIRSF030820 1 180 1.3E-64 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RPIC_RS13240 e5937447b3934dbb1cd054bbe09e3fc0 182 Pfam PF06073 Bacterial protein of unknown function (DUF934) 65 171 2.1E-41 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 RPIC_RS03620 ad73202a865b9e59a213f24ad3a64eab 350 SUPERFAMILY SSF158855 65 346 3.4E-66 T 22-04-2016 RPIC_RS03620 ad73202a865b9e59a213f24ad3a64eab 350 Pfam PF03280 Proteobacterial lipase chaperone protein 134 335 1.1E-52 T 22-04-2016 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 RPIC_RS07520 44820686a2bf09b6158cb74de323cd3f 356 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 109 320 3.2E-15 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RPIC_RS08440 314a9552e8622ab2263424e25a291af1 324 Pfam PF05275 Copper resistance protein B precursor (CopB) 118 324 1.7E-86 T 22-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 Hamap MF_00372 Imidazolonepropionase [hutI]. 10 410 43.677 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 Gene3D G3DSA:3.20.20.140 78 355 8.6E-44 T 22-04-2016 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 PANTHER PTHR22642:SF1 36 410 6.7E-141 T 22-04-2016 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 Pfam PF01979 Amidohydrolase family 69 408 9.5E-19 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 Gene3D G3DSA:2.30.40.10 26 77 1.0E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 PANTHER PTHR22642 36 410 6.7E-141 T 22-04-2016 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 TIGRFAM TIGR01224 hutI: imidazolonepropionase 32 409 9.4E-144 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 SUPERFAMILY SSF51338 8 71 7.21E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 SUPERFAMILY SSF51338 372 409 7.21E-30 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 Gene3D G3DSA:2.30.40.10 356 390 2.6E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RPIC_RS14180 66a4622ea22000e66c45f1bacd6c9f24 411 SUPERFAMILY SSF51556 71 370 2.04E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PANTHER PTHR11739 1 433 3.7E-200 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 SUPERFAMILY SSF48256 8 433 1.19E-163 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 Pfam PF00285 Citrate synthase, C-terminal domain 50 416 4.9E-132 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 18 427 3.9E-245 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PANTHER PTHR11739:SF13 1 433 3.7E-200 T 22-04-2016 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PIRSF PIRSF001369 41 433 1.5E-161 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 Gene3D G3DSA:1.10.580.10 56 284 7.0E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 169 182 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 384 398 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 245 273 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 223 238 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 364 380 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 PRINTS PR00143 Citrate synthase signature 300 320 6.3E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 RPIC_RS10550 b23ac06fa1cbc3720e46fdadae6260d9 433 Gene3D G3DSA:1.10.230.10 285 378 3.8E-42 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain RPIC_RS07335 bd1e705c27fbfb109e2d35c2b8be8600 137 Pfam PF16986 Heavy-metal resistance protein CzcE 56 133 2.3E-29 T 22-04-2016 IPR031560 Heavy-metal resistance protein CzcE RPIC_RS09230 58859d6b7a8143a4c81c2387b7a08c2e 250 PIRSF PIRSF015736 1 249 1.3E-58 T 22-04-2016 IPR026286 Maleate isomerase/Arylmalonate decarboxylase RPIC_RS09230 58859d6b7a8143a4c81c2387b7a08c2e 250 PANTHER PTHR40267 1 246 6.6E-27 T 22-04-2016 RPIC_RS09230 58859d6b7a8143a4c81c2387b7a08c2e 250 Hamap MF_00943 Maleate isomerase [maiA]. 4 250 48.631 T 22-04-2016 IPR028615 Maleate isomerase GO:0050076 KEGG: 00650+5.2.1.1|KEGG: 00760+5.2.1.1|MetaCyc: PWY-5033|MetaCyc: PWY-6993|MetaCyc: PWY-7128|MetaCyc: PWY-722 RPIC_RS07860 fa4fa54b0c55a53c372e9cea4236fbd4 657 PANTHER PTHR11785:SF125 36 484 5.8E-61 T 22-04-2016 RPIC_RS07860 fa4fa54b0c55a53c372e9cea4236fbd4 657 PANTHER PTHR11785 36 484 5.8E-61 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS07860 fa4fa54b0c55a53c372e9cea4236fbd4 657 Pfam PF13520 Amino acid permease 61 445 2.6E-16 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RPIC_RS22425 cf86ca8bc2edeff8104b5066dc9ca3fe 349 Pfam PF01435 Peptidase family M48 200 304 4.2E-22 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 RPIC_RS22425 cf86ca8bc2edeff8104b5066dc9ca3fe 349 PANTHER PTHR10120 1 348 1.2E-86 T 22-04-2016 RPIC_RS22425 cf86ca8bc2edeff8104b5066dc9ca3fe 349 PANTHER PTHR10120:SF24 1 348 1.2E-86 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 RPIC_RS22425 cf86ca8bc2edeff8104b5066dc9ca3fe 349 Gene3D G3DSA:3.30.2010.10 195 285 2.3E-19 T 22-04-2016 RPIC_RS22425 cf86ca8bc2edeff8104b5066dc9ca3fe 349 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 19 197 4.5E-55 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 Pfam PF12833 Helix-turn-helix domain 181 259 4.7E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 Pfam PF02311 AraC-like ligand binding domain 24 132 1.9E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 SMART SM00342 175 257 6.4E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 SUPERFAMILY SSF46689 218 258 6.65E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 PANTHER PTHR11019 21 265 4.5E-68 T 22-04-2016 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 Gene3D G3DSA:1.10.10.60 154 210 9.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 SUPERFAMILY SSF51182 16 184 1.72E-17 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 Gene3D G3DSA:2.60.120.10 20 92 5.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 257 4.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 226 241 4.9E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 PANTHER PTHR11019:SF99 21 265 4.5E-68 T 22-04-2016 RPIC_RS16545 bf9e7d20cc8cd065c7833693741e4df7 265 Gene3D G3DSA:1.10.10.60 221 256 3.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 RPIC_RS04705 955faa77191c0dafc99d10f10aa3ec25 367 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 31 362 3.7E-77 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 RPIC_RS04705 955faa77191c0dafc99d10f10aa3ec25 367 Pfam PF03601 Conserved hypothetical protein 698 24 343 1.2E-81 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RPIC_RS04705 955faa77191c0dafc99d10f10aa3ec25 367 PANTHER PTHR30106 20 367 3.1E-99 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RPIC_RS04705 955faa77191c0dafc99d10f10aa3ec25 367 PANTHER PTHR30106:SF2 20 367 3.1E-99 T 22-04-2016 RPIC_RS06365 3959316f3790023c94668d6a6c1a9507 186 Gene3D G3DSA:1.10.132.20 68 186 3.7E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain RPIC_RS06365 3959316f3790023c94668d6a6c1a9507 186 Pfam PF01765 Ribosome recycling factor 21 184 1.5E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain RPIC_RS06365 3959316f3790023c94668d6a6c1a9507 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 6.2E-69 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RPIC_RS06365 3959316f3790023c94668d6a6c1a9507 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.297 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RPIC_RS06365 3959316f3790023c94668d6a6c1a9507 186 SUPERFAMILY SSF55194 5 185 6.02E-71 T 22-04-2016 IPR023584 Ribosome recycling factor domain RPIC_RS06365 3959316f3790023c94668d6a6c1a9507 186 PANTHER PTHR20982 6 186 2.6E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 RPIC_RS05040 3b824a6bc74e8f3bc9681f82729979d6 215 SUPERFAMILY SSF54001 58 180 2.88E-41 T 22-04-2016 RPIC_RS05040 3b824a6bc74e8f3bc9681f82729979d6 215 Gene3D G3DSA:3.90.1720.10 58 179 5.9E-44 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS05040 3b824a6bc74e8f3bc9681f82729979d6 215 Pfam PF00877 NlpC/P60 family 72 178 5.7E-29 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- RPIC_RS05040 3b824a6bc74e8f3bc9681f82729979d6 215 PANTHER PTHR21666 59 181 3.4E-38 T 22-04-2016 RPIC_RS15195 27d7acd7faf911cba81eb95904b0e26b 166 SUPERFAMILY SSF52833 1 163 7.47E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15195 27d7acd7faf911cba81eb95904b0e26b 166 PANTHER PTHR10430 2 166 1.2E-76 T 22-04-2016 RPIC_RS15195 27d7acd7faf911cba81eb95904b0e26b 166 Gene3D G3DSA:3.40.30.10 1 166 5.9E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS15195 27d7acd7faf911cba81eb95904b0e26b 166 Pfam PF08534 Redoxin 3 163 5.7E-39 T 22-04-2016 IPR013740 Redoxin GO:0016491 RPIC_RS15685 7f379fdc0ed0e8c1eb5e1191700fd4ea 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 91 4.1E-19 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS15685 7f379fdc0ed0e8c1eb5e1191700fd4ea 95 PANTHER PTHR33755 2 92 7.7E-19 T 22-04-2016 RPIC_RS15685 7f379fdc0ed0e8c1eb5e1191700fd4ea 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 6 89 2.7E-12 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RPIC_RS15685 7f379fdc0ed0e8c1eb5e1191700fd4ea 95 PANTHER PTHR33755:SF6 2 92 7.7E-19 T 22-04-2016 RPIC_RS07240 b29b8f627f9b07fecd07f207af759a2f 302 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 280 7.4E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS07240 b29b8f627f9b07fecd07f207af759a2f 302 PANTHER PTHR32196:SF27 1 302 5.5E-131 T 22-04-2016 RPIC_RS07240 b29b8f627f9b07fecd07f207af759a2f 302 PANTHER PTHR32196 1 302 5.5E-131 T 22-04-2016 RPIC_RS13205 cbff5ec81b561ce7a6f339a1e8c37513 397 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 393 2.1E-98 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 RPIC_RS13205 cbff5ec81b561ce7a6f339a1e8c37513 397 PANTHER PTHR33529:SF1 1 225 1.1E-67 T 22-04-2016 RPIC_RS13205 cbff5ec81b561ce7a6f339a1e8c37513 397 PANTHER PTHR33529:SF1 251 396 1.1E-67 T 22-04-2016 RPIC_RS13205 cbff5ec81b561ce7a6f339a1e8c37513 397 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 390 1.6E-65 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 RPIC_RS13205 cbff5ec81b561ce7a6f339a1e8c37513 397 PANTHER PTHR33529 1 225 1.1E-67 T 22-04-2016 RPIC_RS13205 cbff5ec81b561ce7a6f339a1e8c37513 397 PANTHER PTHR33529 251 396 1.1E-67 T 22-04-2016 RPIC_RS17735 17ed8ce899912dd9fc052130c3811b61 107 PANTHER PTHR33154:SF5 1 101 3.0E-27 T 22-04-2016 RPIC_RS17735 17ed8ce899912dd9fc052130c3811b61 107 Gene3D G3DSA:1.10.10.10 2 103 1.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17735 17ed8ce899912dd9fc052130c3811b61 107 Pfam PF12840 Helix-turn-helix domain 10 69 2.2E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17735 17ed8ce899912dd9fc052130c3811b61 107 SUPERFAMILY SSF46785 3 94 8.44E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain RPIC_RS17735 17ed8ce899912dd9fc052130c3811b61 107 SMART SM00418 8 89 1.5E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RPIC_RS17735 17ed8ce899912dd9fc052130c3811b61 107 PANTHER PTHR33154 1 101 3.0E-27 T 22-04-2016 RPIC_RS10975 e8fff7113ec00d722e44753655304f5d 284 Pfam PF11304 Protein of unknown function (DUF3106) 78 176 1.2E-31 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 RPIC_RS17340 fa3faa112688108df320ce743e9ae1e8 161 Gene3D G3DSA:2.60.120.10 73 153 1.6E-17 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS17340 fa3faa112688108df320ce743e9ae1e8 161 SUPERFAMILY SSF51182 41 152 1.03E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS17340 fa3faa112688108df320ce743e9ae1e8 161 Pfam PF07883 Cupin domain 82 140 2.3E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS07640 d51185cbd5b02fa201e6420d2bac82df 393 Pfam PF05280 Flagellar transcriptional activator (FlhC) 256 379 3.0E-13 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 RPIC_RS07640 d51185cbd5b02fa201e6420d2bac82df 393 SUPERFAMILY SSF160930 221 376 9.94E-35 T 22-04-2016 RPIC_RS05955 c5379009b8be6627c9ee1115e5482a53 556 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 73 235 2.6E-17 T 22-04-2016 RPIC_RS05955 c5379009b8be6627c9ee1115e5482a53 556 PANTHER PTHR33908 2 439 6.0E-76 T 22-04-2016 RPIC_RS05955 c5379009b8be6627c9ee1115e5482a53 556 PANTHER PTHR33908:SF3 2 439 6.0E-76 T 22-04-2016 RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 276 1.9E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 PANTHER PTHR30085:SF2 9 305 1.2E-108 T 22-04-2016 RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 SUPERFAMILY SSF53850 15 279 6.53E-61 T 22-04-2016 RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 SMART SM00062 45 278 2.0E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 Gene3D G3DSA:3.40.190.10 42 129 3.9E-28 T 22-04-2016 RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 Gene3D G3DSA:3.40.190.10 239 280 3.9E-28 T 22-04-2016 RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 PANTHER PTHR30085 9 305 1.2E-108 T 22-04-2016 RPIC_RS12160 f157b987f74b51232402b378aa7037a7 307 Gene3D G3DSA:3.40.190.10 130 238 6.2E-30 T 22-04-2016 RPIC_RS04020 a5121490abf82c59de9ca96a0c60643d 230 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 16 189 6.1E-66 T 22-04-2016 IPR022301 Integral membrane protein YjbE RPIC_RS04020 a5121490abf82c59de9ca96a0c60643d 230 Pfam PF03741 Integral membrane protein TerC family 18 188 1.9E-42 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 RPIC_RS04020 a5121490abf82c59de9ca96a0c60643d 230 PANTHER PTHR30060 1 195 2.7E-40 T 22-04-2016 RPIC_RS13990 6ce74fd0eb00110596a4e8844f3655be 218 PANTHER PTHR16557 51 215 1.4E-43 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 RPIC_RS13990 6ce74fd0eb00110596a4e8844f3655be 218 Gene3D G3DSA:2.60.120.590 24 217 4.7E-53 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RPIC_RS13990 6ce74fd0eb00110596a4e8844f3655be 218 SUPERFAMILY SSF51197 23 216 4.12E-58 T 22-04-2016 RPIC_RS13990 6ce74fd0eb00110596a4e8844f3655be 218 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 37 215 8.1E-54 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RPIC_RS13670 8db7e70a3131c0257dd77e4cdf928fc2 310 PANTHER PTHR12715:SF17 5 301 3.9E-86 T 22-04-2016 RPIC_RS13670 8db7e70a3131c0257dd77e4cdf928fc2 310 SUPERFAMILY SSF103481 186 280 1.31E-17 T 22-04-2016 RPIC_RS13670 8db7e70a3131c0257dd77e4cdf928fc2 310 PANTHER PTHR12715 5 301 3.9E-86 T 22-04-2016 RPIC_RS13670 8db7e70a3131c0257dd77e4cdf928fc2 310 Pfam PF00892 EamA-like transporter family 151 281 1.7E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS13670 8db7e70a3131c0257dd77e4cdf928fc2 310 Pfam PF00892 EamA-like transporter family 9 136 1.1E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS13670 8db7e70a3131c0257dd77e4cdf928fc2 310 SUPERFAMILY SSF103481 38 139 2.22E-16 T 22-04-2016 RPIC_RS17745 57af11f62ac384c4a64ba39040a5b214 164 PANTHER PTHR11717:SF18 4 163 1.1E-30 T 22-04-2016 RPIC_RS17745 57af11f62ac384c4a64ba39040a5b214 164 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 142 7.8E-16 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS17745 57af11f62ac384c4a64ba39040a5b214 164 PANTHER PTHR11717 4 163 1.1E-30 T 22-04-2016 RPIC_RS17745 57af11f62ac384c4a64ba39040a5b214 164 SUPERFAMILY SSF52788 3 144 2.35E-35 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS17745 57af11f62ac384c4a64ba39040a5b214 164 Gene3D G3DSA:3.40.50.270 2 142 1.2E-37 T 22-04-2016 RPIC_RS17745 57af11f62ac384c4a64ba39040a5b214 164 SMART SM00226 3 144 2.6E-31 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily RPIC_RS15295 c42ac3e05ff5a87a27fdcb40ab9f46a7 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 1.0E-62 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 RPIC_RS15295 c42ac3e05ff5a87a27fdcb40ab9f46a7 205 PANTHER PTHR20855 5 204 2.0E-55 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RPIC_RS15295 c42ac3e05ff5a87a27fdcb40ab9f46a7 205 Pfam PF03006 Haemolysin-III related 4 197 5.7E-40 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RPIC_RS15295 c42ac3e05ff5a87a27fdcb40ab9f46a7 205 PANTHER PTHR20855:SF3 5 204 2.0E-55 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 RPIC_RS08990 27405f9e47db54053b8e8fcd7f94badd 129 Pfam PF16986 Heavy-metal resistance protein CzcE 45 127 6.2E-32 T 22-04-2016 IPR031560 Heavy-metal resistance protein CzcE RPIC_RS03335 74862b0004a8af9acb217289330ededa 342 SUPERFAMILY SSF74653 244 341 2.75E-18 T 22-04-2016 RPIC_RS03335 74862b0004a8af9acb217289330ededa 342 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 280 340 3.7E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC_RS03335 74862b0004a8af9acb217289330ededa 342 Gene3D G3DSA:3.30.1150.10 237 341 2.7E-27 T 22-04-2016 RPIC_RS03335 74862b0004a8af9acb217289330ededa 342 Pfam PF13103 TonB C terminal 255 338 3.8E-24 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 RPIC_RS03335 74862b0004a8af9acb217289330ededa 342 TIGRFAM TIGR02794 tolA_full: protein TolA 19 340 5.1E-52 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 RPIC_RS16045 54e96bf4211b9739ada65d01c662a43e 181 PIRSF PIRSF016481 9 180 1.5E-40 T 22-04-2016 IPR007446 Pilus assembly protein PilP RPIC_RS16045 54e96bf4211b9739ada65d01c662a43e 181 Pfam PF04351 Pilus assembly protein, PilP 36 175 3.2E-43 T 22-04-2016 IPR007446 Pilus assembly protein PilP RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 Pfam PF07690 Major Facilitator Superfamily 24 416 6.6E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 PANTHER PTHR23501:SF52 5 509 8.2E-231 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 Gene3D G3DSA:1.20.1250.20 21 203 7.5E-30 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 4.6E-5 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 4.6E-5 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 346 366 4.6E-5 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 4.6E-5 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 501 5.9E-161 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 PANTHER PTHR23501 5 509 8.2E-231 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 Gene3D G3DSA:1.20.1250.20 480 507 2.6E-17 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 Gene3D G3DSA:1.20.1250.20 272 428 2.6E-17 T 22-04-2016 RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 SUPERFAMILY SSF103473 12 203 1.44E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 SUPERFAMILY SSF103473 479 505 1.44E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS05580 6130437553ea8da8104355e30b78d9b7 518 SUPERFAMILY SSF103473 256 427 1.44E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain RPIC_RS08830 f46040618346e6c24037adb828605add 81 Pfam PF11666 Protein of unknown function (DUF2933) 15 65 3.8E-17 T 22-04-2016 IPR021682 Protein of unknown function DUF2933 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 Gene3D G3DSA:3.40.50.170 4 196 6.3E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 SUPERFAMILY SSF50486 206 296 1.54E-18 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 SUPERFAMILY SSF53328 5 203 9.94E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 Gene3D G3DSA:3.10.25.10 206 283 6.9E-16 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 PANTHER PTHR11138 3 283 3.5E-56 T 22-04-2016 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 Pfam PF00551 Formyl transferase 55 178 1.2E-24 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS05935 b09c60b489d4b377b7817ce5d0ae0fc0 309 Pfam PF02911 Formyl transferase, C-terminal domain 204 292 1.5E-14 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RPIC_RS13615 28c1f0733a7d7662eda07ceaedc54d02 136 PANTHER PTHR33452 1 130 2.0E-40 T 22-04-2016 RPIC_RS13615 28c1f0733a7d7662eda07ceaedc54d02 136 PANTHER PTHR33452:SF6 1 130 2.0E-40 T 22-04-2016 RPIC_RS13615 28c1f0733a7d7662eda07ceaedc54d02 136 Pfam PF07681 DoxX 13 93 3.3E-20 T 22-04-2016 IPR032808 DoxX family RPIC_RS17950 dc20f9f347a3de1fd7a75c645f916b45 143 PANTHER PTHR10108 1 121 4.1E-13 T 22-04-2016 RPIC_RS17950 dc20f9f347a3de1fd7a75c645f916b45 143 Gene3D G3DSA:1.10.150.290 19 32 3.2E-31 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RPIC_RS17950 dc20f9f347a3de1fd7a75c645f916b45 143 Gene3D G3DSA:1.10.150.290 67 123 3.2E-31 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RPIC_RS17950 dc20f9f347a3de1fd7a75c645f916b45 143 PANTHER PTHR10108:SF890 1 121 4.1E-13 T 22-04-2016 RPIC_RS14790 d5578a5361012aa034b072298261e1e2 199 Gene3D G3DSA:1.10.10.690 110 198 1.2E-26 T 22-04-2016 IPR027405 YidB-like RPIC_RS14790 d5578a5361012aa034b072298261e1e2 199 SUPERFAMILY SSF140804 89 197 1.02E-21 T 22-04-2016 IPR027405 YidB-like RPIC_RS14790 d5578a5361012aa034b072298261e1e2 199 Pfam PF06078 Bacterial protein of unknown function (DUF937) 49 193 1.1E-8 T 22-04-2016 IPR009282 Protein of unknown function DUF937 RPIC_RS08035 e6edb0e99ec8b67646f9160df472e644 470 Gene3D G3DSA:3.60.21.10 9 286 1.4E-22 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS08035 e6edb0e99ec8b67646f9160df472e644 470 SUPERFAMILY SSF56300 11 341 5.7E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like RPIC_RS11830 6a8a29a6e8ffee6fd4d2e2214dd65423 426 Pfam PF04932 O-Antigen ligase 199 346 1.8E-17 T 22-04-2016 IPR007016 O-antigen ligase-related RPIC_RS11830 6a8a29a6e8ffee6fd4d2e2214dd65423 426 PANTHER PTHR37422:SF2 193 419 2.5E-28 T 22-04-2016 RPIC_RS11830 6a8a29a6e8ffee6fd4d2e2214dd65423 426 PANTHER PTHR37422 193 419 2.5E-28 T 22-04-2016 RPIC_RS12340 bcd5b184986cbfa52947e66aa47cfeef 303 SUPERFAMILY SSF69593 19 295 1.44E-34 T 22-04-2016 RPIC_RS12340 bcd5b184986cbfa52947e66aa47cfeef 303 SMART SM00563 89 231 6.2E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS12340 bcd5b184986cbfa52947e66aa47cfeef 303 PANTHER PTHR10983:SF15 1 294 7.2E-116 T 22-04-2016 RPIC_RS12340 bcd5b184986cbfa52947e66aa47cfeef 303 Pfam PF01553 Acyltransferase 77 230 9.5E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RPIC_RS12340 bcd5b184986cbfa52947e66aa47cfeef 303 PANTHER PTHR10983 1 294 7.2E-116 T 22-04-2016 RPIC_RS13145 617fed655ecd7dd6b7581a37b86ed667 105 SUPERFAMILY SSF102829 5 98 1.57E-19 T 22-04-2016 IPR007838 Cell division protein ZapA-like RPIC_RS13145 617fed655ecd7dd6b7581a37b86ed667 105 PANTHER PTHR34981 2 105 1.8E-13 T 22-04-2016 RPIC_RS13145 617fed655ecd7dd6b7581a37b86ed667 105 Pfam PF05164 Cell division protein ZapA 6 93 8.1E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like RPIC_RS13145 617fed655ecd7dd6b7581a37b86ed667 105 PANTHER PTHR34981:SF1 2 105 1.8E-13 T 22-04-2016 RPIC_RS03430 aaa1599ac2b5c12d84bef727d156208b 175 Pfam PF11780 Protein of unknown function (DUF3318) 34 162 9.0E-27 T 22-04-2016 IPR021751 Protein of unknown function DUF3318 RPIC_RS13340 cc3cda6721ae723108213096ea97c46d 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 295 7.0E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS13340 cc3cda6721ae723108213096ea97c46d 311 PANTHER PTHR11795:SF371 1 310 1.3E-119 T 22-04-2016 RPIC_RS13340 cc3cda6721ae723108213096ea97c46d 311 PANTHER PTHR11795 1 310 1.3E-119 T 22-04-2016 RPIC_RS20015 be1a6734ad0fa210e75702e7cd7f7218 105 SUPERFAMILY SSF102114 1 100 1.57E-12 T 22-04-2016 RPIC_RS20015 be1a6734ad0fa210e75702e7cd7f7218 105 Gene3D G3DSA:3.20.20.70 1 97 8.7E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 RPIC_RS05225 c4ff8b8c8ae633b0009188358ed904a6 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 277 2.6E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS05225 c4ff8b8c8ae633b0009188358ed904a6 287 Gene3D G3DSA:3.60.10.10 5 285 6.3E-21 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS05225 c4ff8b8c8ae633b0009188358ed904a6 287 SUPERFAMILY SSF56219 5 284 5.37E-32 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 Gene3D G3DSA:1.10.3720.10 320 600 1.1E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 Gene3D G3DSA:1.10.3720.10 31 297 3.2E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 PANTHER PTHR30193:SF14 23 305 7.1E-123 T 22-04-2016 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 PANTHER PTHR30193 23 305 7.1E-123 T 22-04-2016 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 399 589 2.3E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 293 3.2E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 SUPERFAMILY SSF161098 317 600 8.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS15870 f5eab7d0823d7fad92778322d168caad 603 SUPERFAMILY SSF161098 29 298 8.22E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RPIC_RS09625 423888388189cd40b8360ee5474cab82 256 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 49 246 3.2E-61 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09625 423888388189cd40b8360ee5474cab82 256 Gene3D G3DSA:3.90.850.10 40 252 3.4E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09625 423888388189cd40b8360ee5474cab82 256 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 249 1.1E-118 T 22-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 RPIC_RS09625 423888388189cd40b8360ee5474cab82 256 PANTHER PTHR11820 21 250 5.4E-126 T 22-04-2016 RPIC_RS09625 423888388189cd40b8360ee5474cab82 256 SUPERFAMILY SSF56529 39 249 1.83E-74 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RPIC_RS09625 423888388189cd40b8360ee5474cab82 256 PANTHER PTHR11820:SF8 21 250 5.4E-126 T 22-04-2016 RPIC_RS16055 ae7a93c9564355b992c2a76d0afdb15e 210 Pfam PF05137 Fimbrial assembly protein (PilN) 111 192 1.6E-21 T 22-04-2016 IPR007813 Fimbrial assembly PilN RPIC_RS16055 ae7a93c9564355b992c2a76d0afdb15e 210 PANTHER PTHR40278 6 206 2.6E-34 T 22-04-2016 RPIC_RS16055 ae7a93c9564355b992c2a76d0afdb15e 210 PANTHER PTHR40278:SF1 6 206 2.6E-34 T 22-04-2016 RPIC_RS07250 9bc9428d0b7dab4d5c8e96038dfca28f 366 SUPERFAMILY SSF46565 214 252 4.45E-7 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS07250 9bc9428d0b7dab4d5c8e96038dfca28f 366 Gene3D G3DSA:1.10.287.110 214 252 6.6E-8 T 22-04-2016 IPR001623 DnaJ domain RPIC_RS04805 3b7391598a63bcc19556f64d012a5b9a 111 PANTHER PTHR37485 2 106 7.4E-36 T 22-04-2016 RPIC_RS04805 3b7391598a63bcc19556f64d012a5b9a 111 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.105 T 22-04-2016 IPR023081 Cell division protein FtsB RPIC_RS04805 3b7391598a63bcc19556f64d012a5b9a 111 Pfam PF04977 Septum formation initiator 11 89 2.5E-27 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RPIC_RS04805 3b7391598a63bcc19556f64d012a5b9a 111 PANTHER PTHR37485:SF1 2 106 7.4E-36 T 22-04-2016 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 Pfam PF02628 Cytochrome oxidase assembly protein 31 341 2.4E-86 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 PANTHER PTHR35457:SF1 256 363 1.7E-54 T 22-04-2016 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 PANTHER PTHR35457:SF1 29 70 1.7E-54 T 22-04-2016 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 PANTHER PTHR35457:SF1 86 233 1.7E-54 T 22-04-2016 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 PANTHER PTHR35457 256 363 1.7E-54 T 22-04-2016 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 PANTHER PTHR35457 29 70 1.7E-54 T 22-04-2016 RPIC_RS01100 a72c4a458b611054df35d425126cdd0b 363 PANTHER PTHR35457 86 233 1.7E-54 T 22-04-2016 RPIC_RS14320 6c35f2c52adac6bceddbc0a5af622601 243 PANTHER PTHR30249 1 241 1.1E-92 T 22-04-2016 RPIC_RS14320 6c35f2c52adac6bceddbc0a5af622601 243 PANTHER PTHR30249:SF5 1 241 1.1E-92 T 22-04-2016 RPIC_RS14320 6c35f2c52adac6bceddbc0a5af622601 243 Pfam PF04172 LrgB-like family 26 238 5.7E-81 T 22-04-2016 IPR007300 CidB/LrgB family RPIC_RS02670 a018b82c79256b3919cc6d453874acd5 260 Gene3D G3DSA:3.40.190.10 26 162 2.1E-10 T 22-04-2016 RPIC_RS02670 a018b82c79256b3919cc6d453874acd5 260 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 5.0E-31 T 22-04-2016 RPIC_RS02670 a018b82c79256b3919cc6d453874acd5 260 Gene3D G3DSA:3.40.190.10 181 248 6.9E-4 T 22-04-2016 RPIC_RS02670 a018b82c79256b3919cc6d453874acd5 260 SUPERFAMILY SSF53850 27 253 9.0E-41 T 22-04-2016 RPIC_RS02670 a018b82c79256b3919cc6d453874acd5 260 PANTHER PTHR30632 24 255 2.2E-67 T 22-04-2016 RPIC_RS02670 a018b82c79256b3919cc6d453874acd5 260 PANTHER PTHR30632:SF5 24 255 2.2E-67 T 22-04-2016 RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 PANTHER PTHR10366 2 289 2.5E-53 T 22-04-2016 RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 PANTHER PTHR10366 314 351 2.5E-53 T 22-04-2016 RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 SUPERFAMILY SSF51735 1 267 2.84E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 SUPERFAMILY SSF51735 316 351 2.84E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 Pfam PF07993 Male sterility protein 5 233 2.0E-24 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 PANTHER PTHR10366:SF382 2 289 2.5E-53 T 22-04-2016 RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 PANTHER PTHR10366:SF382 314 351 2.5E-53 T 22-04-2016 RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 Gene3D G3DSA:3.40.50.720 316 349 6.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS05780 44d37ad2d95e970d84b0b119e8a5dcc9 367 Gene3D G3DSA:3.40.50.720 1 274 6.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS07045 50efbf267d15344b3801a21898cc34ee 139 Pfam PF07238 PilZ domain 37 122 1.4E-7 T 22-04-2016 IPR009875 PilZ domain GO:0035438 RPIC_RS08135 dac8ec4fd3c7d0fa008442435edeab25 99 Pfam PF04945 YHS domain 46 90 1.8E-8 T 22-04-2016 IPR007029 YHS domain RPIC_RS12825 d0e96f1daa62a942bfa53397e1f38602 300 PIRSF PIRSF015558 10 300 1.3E-99 T 22-04-2016 IPR016634 Transcription regulator, DeoR type, predicted RPIC_RS12825 d0e96f1daa62a942bfa53397e1f38602 300 Pfam PF13280 WYL domain 135 207 9.6E-8 T 22-04-2016 IPR026881 WYL domain RPIC_RS14825 201ad7a3667d0804db2815dadd120c80 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 324 2.0E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS14825 201ad7a3667d0804db2815dadd120c80 336 PANTHER PTHR32196:SF37 1 331 5.2E-97 T 22-04-2016 RPIC_RS14825 201ad7a3667d0804db2815dadd120c80 336 PANTHER PTHR32196 1 331 5.2E-97 T 22-04-2016 RPIC_RS14980 91979459a68b263fb32df515d6062314 151 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 32 149 2.0E-32 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 RPIC_RS14980 91979459a68b263fb32df515d6062314 151 PANTHER PTHR36919 16 149 2.7E-45 T 22-04-2016 RPIC_RS14980 91979459a68b263fb32df515d6062314 151 PANTHER PTHR36919:SF1 16 149 2.7E-45 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 PANTHER PTHR14226:SF34 107 156 8.6E-63 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 PANTHER PTHR14226:SF34 174 328 8.6E-63 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 PANTHER PTHR14226:SF34 1 84 8.6E-63 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 Pfam PF01734 Patatin-like phospholipase 2 219 1.8E-20 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 Gene3D G3DSA:3.40.1090.10 3 220 3.3E-11 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 PANTHER PTHR14226 107 156 8.6E-63 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 PANTHER PTHR14226 174 328 8.6E-63 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 PANTHER PTHR14226 1 84 8.6E-63 T 22-04-2016 RPIC_RS00780 aabb73ba958330a5829055ea62924c3d 385 SUPERFAMILY SSF52151 3 256 1.39E-38 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS01095 ff7caf3ad0c7264f1890c687d1cbf8e3 218 Gene3D G3DSA:3.40.30.10 77 213 1.1E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS01095 ff7caf3ad0c7264f1890c687d1cbf8e3 218 SUPERFAMILY SSF52833 76 213 1.24E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS18520 0c60c20271f6d6c52963beb453eee2ca 437 SUPERFAMILY SSF142764 11 428 2.88E-127 T 22-04-2016 RPIC_RS18520 0c60c20271f6d6c52963beb453eee2ca 437 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 267 421 1.1E-45 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain RPIC_RS18520 0c60c20271f6d6c52963beb453eee2ca 437 PANTHER PTHR30304 14 432 6.0E-92 T 22-04-2016 RPIC_RS18520 0c60c20271f6d6c52963beb453eee2ca 437 PANTHER PTHR30304:SF3 14 432 6.0E-92 T 22-04-2016 RPIC_RS18520 0c60c20271f6d6c52963beb453eee2ca 437 Pfam PF07005 Putative sugar-binding N-terminal domain 11 238 9.4E-70 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain RPIC_RS01200 ea7330bf006ca3b6641e37a411759df4 211 Pfam PF13511 Domain of unknown function (DUF4124) 19 71 3.1E-6 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 RPIC_RS16325 b43f02d70bd6f8a3ce41fb513c13507c 196 SUPERFAMILY SSF53335 7 151 7.74E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS16325 b43f02d70bd6f8a3ce41fb513c13507c 196 Gene3D G3DSA:3.40.50.150 4 149 8.0E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RPIC_RS16325 b43f02d70bd6f8a3ce41fb513c13507c 196 Pfam PF08241 Methyltransferase domain 45 137 1.2E-12 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RPIC_RS13695 844115cc9b45e7e1c4be23c04ae7657f 69 PRINTS PR01035 Tetracycline resistance protein signature 9 32 5.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIC_RS13695 844115cc9b45e7e1c4be23c04ae7657f 69 PRINTS PR01035 Tetracycline resistance protein signature 39 58 5.0E-10 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 295 2.4E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 SUPERFAMILY SSF111369 53 301 1.96E-81 T 22-04-2016 RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 Gene3D G3DSA:2.40.50.100 174 209 6.0E-22 T 22-04-2016 RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 Gene3D G3DSA:2.40.50.100 66 99 6.0E-22 T 22-04-2016 RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 PANTHER PTHR30158:SF3 1 394 1.4E-167 T 22-04-2016 RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 376 2.9E-82 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS18575 839cef2bb86005a0d2675ec26c75f17b 423 PANTHER PTHR30158 1 394 1.4E-167 T 22-04-2016 RPIC_RS02110 6b1b70545961dcf17b34a23619240907 328 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 152 6.5E-10 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 RPIC_RS02110 6b1b70545961dcf17b34a23619240907 328 SUPERFAMILY SSF53187 12 323 8.64E-57 T 22-04-2016 RPIC_RS02110 6b1b70545961dcf17b34a23619240907 328 Gene3D G3DSA:3.40.630.10 35 156 4.0E-5 T 22-04-2016 RPIC_RS09430 cc2266cb9dd64c908860b2516fb53a25 67 Pfam PF04325 Protein of unknown function (DUF465) 14 57 1.3E-10 T 22-04-2016 IPR007420 Protein of unknown function DUF465 RPIC_RS03370 c81a23a6021fd9dc1cea51601f90bcb5 256 Pfam PF01261 Xylose isomerase-like TIM barrel 27 206 1.3E-8 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS03370 c81a23a6021fd9dc1cea51601f90bcb5 256 SUPERFAMILY SSF51658 1 254 1.08E-56 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS03370 c81a23a6021fd9dc1cea51601f90bcb5 256 Gene3D G3DSA:3.20.20.150 1 255 3.0E-75 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 PANTHER PTHR30158 1 384 5.4E-138 T 22-04-2016 RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 Gene3D G3DSA:2.40.50.100 69 102 1.2E-21 T 22-04-2016 RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 Gene3D G3DSA:2.40.50.100 177 211 1.2E-21 T 22-04-2016 RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 SUPERFAMILY SSF111369 57 303 1.96E-71 T 22-04-2016 RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 PANTHER PTHR30158:SF7 1 384 5.4E-138 T 22-04-2016 RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 298 3.4E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RPIC_RS04130 3bb751b76b17fd7c961773a3f5c1b731 393 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 379 5.3E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 RPIC_RS04740 b67613ea1c99495e2e305768295a68b8 416 Pfam PF02687 FtsX-like permease family 276 409 6.1E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC_RS04740 b67613ea1c99495e2e305768295a68b8 416 Pfam PF12704 MacB-like periplasmic core domain 30 244 2.6E-20 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RPIC_RS04740 b67613ea1c99495e2e305768295a68b8 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 416 1.3E-147 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 RPIC_RS04740 b67613ea1c99495e2e305768295a68b8 416 PANTHER PTHR30489:SF8 9 416 2.0E-100 T 22-04-2016 RPIC_RS04740 b67613ea1c99495e2e305768295a68b8 416 PANTHER PTHR30489 9 416 2.0E-100 T 22-04-2016 RPIC_RS07270 f4900c7858236d092dbb6c2da6a2e40a 346 Gene3D G3DSA:3.40.190.10 26 141 1.5E-15 T 22-04-2016 RPIC_RS07270 f4900c7858236d092dbb6c2da6a2e40a 346 SUPERFAMILY SSF53850 26 343 3.75E-69 T 22-04-2016 RPIC_RS07270 f4900c7858236d092dbb6c2da6a2e40a 346 Gene3D G3DSA:3.40.190.10 142 287 4.9E-37 T 22-04-2016 RPIC_RS07270 f4900c7858236d092dbb6c2da6a2e40a 346 PANTHER PTHR30222:SF2 8 346 3.0E-145 T 22-04-2016 RPIC_RS07270 f4900c7858236d092dbb6c2da6a2e40a 346 Pfam PF13416 Bacterial extracellular solute-binding protein 46 309 2.4E-47 T 22-04-2016 RPIC_RS07270 f4900c7858236d092dbb6c2da6a2e40a 346 PANTHER PTHR30222 8 346 3.0E-145 T 22-04-2016 RPIC_RS07595 371f8164c802362aee726c8110f4caba 417 Pfam PF06864 Pilin accessory protein (PilO) 14 403 1.9E-106 T 22-04-2016 IPR009663 Pilin accessory predicted RPIC_RS04735 06c46fb56f9801a23ef0b3f39e000912 359 PIRSF PIRSF015283 1 353 2.7E-116 T 22-04-2016 IPR016631 Regulatory, RpfE RPIC_RS02745 865086142f055d964ea4064bdaf48e60 476 Pfam PF00474 Sodium:solute symporter family 38 416 2.9E-23 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS02745 865086142f055d964ea4064bdaf48e60 476 PANTHER PTHR11819 5 449 7.2E-40 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RPIC_RS08585 18cc2d4d8d02497cf8c77f347757dc19 127 Pfam PF04138 GtrA-like protein 9 121 4.9E-19 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RPIC_RS03765 f2d873e95d32b134881cf17bd7b7e489 163 PANTHER PTHR35603 58 159 6.0E-14 T 22-04-2016 RPIC_RS03765 f2d873e95d32b134881cf17bd7b7e489 163 Pfam PF05433 Glycine zipper 2TM domain 72 111 1.6E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC_RS05615 fdf5a9f6a1d552946609b62cc701f0cb 301 PANTHER PTHR21624 20 287 1.4E-75 T 22-04-2016 RPIC_RS05615 fdf5a9f6a1d552946609b62cc701f0cb 301 Pfam PF04116 Fatty acid hydroxylase superfamily 94 235 4.9E-29 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 PANTHER PTHR30332 261 567 3.4E-67 T 22-04-2016 RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 Pfam PF00263 Bacterial type II and III secretion system protein 327 497 5.4E-44 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 Pfam PF13629 Pilus formation protein N terminal region 104 172 4.5E-18 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 461 479 3.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 273 3.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 484 498 3.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS02875 317568a63c65a4a279d4b508417088f4 663 PRINTS PR00811 Bacterial general secretion pathway protein D signature 322 346 3.4E-12 T 22-04-2016 IPR001775 GspD/PilQ family RPIC_RS17705 cfacb9eec2e6b497b17241f713d36519 320 SUPERFAMILY SSF48230 42 313 6.04E-44 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase RPIC_RS17705 cfacb9eec2e6b497b17241f713d36519 320 Gene3D G3DSA:1.50.10.110 23 315 1.8E-65 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RPIC_RS17705 cfacb9eec2e6b497b17241f713d36519 320 Pfam PF05426 Alginate lyase 65 256 1.5E-39 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 RPIC_RS04560 a982f2884bc838ce71e26f58ae23f9cb 122 Pfam PF16137 Domain of unknown function (DUF4845) 36 117 1.4E-20 T 22-04-2016 IPR032314 Protein of unknown function DUF4845 RPIC_RS03595 0baffb82fd00331b039eb0a38c4d187c 440 Pfam PF13163 Protein of unknown function (DUF3999) 19 428 1.3E-117 T 22-04-2016 IPR025060 Protein of unknown function DUF3999 RPIC_RS07555 4fd83382318d5b4e587db5873a7a4871 293 Pfam PF03524 Conjugal transfer protein 72 284 3.1E-52 T 22-04-2016 IPR010258 Conjugal transfer, TrbG/VirB9/CagX RPIC_RS02900 f32dc313795f241ac16f660878eb91a3 56 Pfam PF04964 Flp/Fap pilin component 11 56 2.0E-19 T 22-04-2016 IPR007047 Flp/Fap pilin component RPIC_RS17570 2fc6c89bc2e9bac0250a4173d7db6195 70 SUPERFAMILY SSF55008 5 66 9.03E-18 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS17570 2fc6c89bc2e9bac0250a4173d7db6195 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RPIC_RS17570 2fc6c89bc2e9bac0250a4173d7db6195 70 Gene3D G3DSA:3.30.70.100 6 66 2.0E-22 T 22-04-2016 RPIC_RS17570 2fc6c89bc2e9bac0250a4173d7db6195 70 Pfam PF00403 Heavy-metal-associated domain 7 64 2.6E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RPIC_RS09520 0c8cf0557713917b32739f911beb536f 235 PANTHER PTHR23026:SF90 2 235 6.4E-42 T 22-04-2016 RPIC_RS09520 0c8cf0557713917b32739f911beb536f 235 PANTHER PTHR23026 2 235 6.4E-42 T 22-04-2016 RPIC_RS09520 0c8cf0557713917b32739f911beb536f 235 SUPERFAMILY SSF55469 14 233 1.44E-51 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC_RS09520 0c8cf0557713917b32739f911beb536f 235 Gene3D G3DSA:3.40.109.10 136 234 8.6E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC_RS09520 0c8cf0557713917b32739f911beb536f 235 Gene3D G3DSA:3.40.109.10 10 104 8.6E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 RPIC_RS09520 0c8cf0557713917b32739f911beb536f 235 Pfam PF00881 Nitroreductase family 18 210 4.6E-39 T 22-04-2016 IPR029479 Nitroreductase RPIC_RS01020 0cb163d226a03fad7152d2ec080cf0b1 140 PANTHER PTHR12231 46 140 1.4E-21 T 22-04-2016 RPIC_RS01020 0cb163d226a03fad7152d2ec080cf0b1 140 SMART SM00450 40 137 6.9E-28 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS01020 0cb163d226a03fad7152d2ec080cf0b1 140 Gene3D G3DSA:3.40.250.10 37 140 1.5E-33 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS01020 0cb163d226a03fad7152d2ec080cf0b1 140 PANTHER PTHR12231:SF138 46 140 1.4E-21 T 22-04-2016 RPIC_RS01020 0cb163d226a03fad7152d2ec080cf0b1 140 SUPERFAMILY SSF52821 26 140 7.99E-35 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS01020 0cb163d226a03fad7152d2ec080cf0b1 140 Pfam PF00581 Rhodanese-like domain 45 133 2.1E-19 T 22-04-2016 IPR001763 Rhodanese-like domain RPIC_RS12280 9324d3a1c80eb37391e1ac8d928332d2 90 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 28 89 8.6E-13 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 RPIC_RS12280 9324d3a1c80eb37391e1ac8d928332d2 90 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 11 89 1.6E-29 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 RPIC_RS17125 119c49f9fad8fe46ab3e369aeee9808b 156 TIGRFAM TIGR04488 SoxY_true_GGCGG: thiosulfate oxidation carrier protein SoxY 9 156 1.0E-49 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY RPIC_RS17125 119c49f9fad8fe46ab3e369aeee9808b 156 Pfam PF13501 Sulfur oxidation protein SoxY 53 154 1.2E-31 T 22-04-2016 IPR032711 Ig-like SoxY domain RPIC_RS17125 119c49f9fad8fe46ab3e369aeee9808b 156 PIRSF PIRSF010312 3 156 4.6E-54 T 22-04-2016 IPR016568 Sulphur oxidation, SoxY RPIC_RS13580 770797ccd938238a40b4a3dd2a7ccf04 153 Pfam PF02643 Uncharacterized ACR, COG1430 48 148 6.1E-33 T 22-04-2016 IPR003795 Protein of unknown function DUF192 RPIC_RS13580 770797ccd938238a40b4a3dd2a7ccf04 153 PANTHER PTHR37953 37 153 1.7E-27 T 22-04-2016 RPIC_RS13580 770797ccd938238a40b4a3dd2a7ccf04 153 PANTHER PTHR37953:SF1 37 153 1.7E-27 T 22-04-2016 RPIC_RS16105 87354350099c4659524a6dea144032fd 142 Pfam PF03640 Secreted repeat of unknown function 44 85 1.0E-12 T 22-04-2016 IPR005297 Lipoprotein repeat RPIC_RS16105 87354350099c4659524a6dea144032fd 142 Pfam PF03640 Secreted repeat of unknown function 98 141 6.2E-20 T 22-04-2016 IPR005297 Lipoprotein repeat RPIC_RS16105 87354350099c4659524a6dea144032fd 142 PANTHER PTHR39335 50 142 2.0E-35 T 22-04-2016 RPIC_RS16105 87354350099c4659524a6dea144032fd 142 PIRSF PIRSF029720 7 142 1.5E-49 T 22-04-2016 IPR014558 Uncharacterised conserved lipoprotein RPIC_RS05735 93a3e8c1840e10904105dfed00291234 371 Pfam PF00534 Glycosyl transferases group 1 196 347 5.6E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 RPIC_RS05735 93a3e8c1840e10904105dfed00291234 371 PANTHER PTHR12526 104 366 1.4E-53 T 22-04-2016 RPIC_RS05735 93a3e8c1840e10904105dfed00291234 371 Gene3D G3DSA:3.40.50.2000 155 348 1.0E-25 T 22-04-2016 RPIC_RS05735 93a3e8c1840e10904105dfed00291234 371 SUPERFAMILY SSF53756 2 369 3.87E-66 T 22-04-2016 RPIC_RS05735 93a3e8c1840e10904105dfed00291234 371 Pfam PF13439 Glycosyltransferase Family 4 16 173 1.9E-8 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 Gene3D G3DSA:1.20.1510.10 290 356 3.9E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 Gene3D G3DSA:1.20.1510.10 25 155 3.9E-47 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 PANTHER PTHR11562:SF40 7 173 5.1E-124 T 22-04-2016 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 PANTHER PTHR11562:SF40 291 432 5.1E-124 T 22-04-2016 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 PANTHER PTHR11562 7 173 5.1E-124 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 PANTHER PTHR11562 291 432 5.1E-124 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 428 8.3E-65 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 SUPERFAMILY SSF161111 23 155 1.01E-42 T 22-04-2016 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 SUPERFAMILY SSF161111 290 358 1.01E-42 T 22-04-2016 RPIC_RS07825 4adec6b82616cf9259211c5dd26fce2e 434 Pfam PF01545 Cation efflux family 30 357 7.7E-32 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 Gene3D G3DSA:2.30.130.10 251 317 8.5E-7 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 17 316 19.654 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 PANTHER PTHR13767 14 316 7.5E-123 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 39 190 2.9E-57 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 PANTHER PTHR13767:SF2 14 316 7.5E-123 T 22-04-2016 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 191 248 5.3E-16 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 SUPERFAMILY SSF55120 17 255 6.62E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 316 8.1E-15 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 SUPERFAMILY SSF88697 251 317 8.95E-5 T 22-04-2016 IPR015947 PUA-like domain RPIC_RS05565 4c0e5edd2fa04126bafa0ed8545ceb2a 318 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 18 229 7.2E-79 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RPIC_RS08810 051c906fc47e0cc8057b5a09fbf4ce36 90 SUPERFAMILY SSF52833 4 83 2.95E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS08810 051c906fc47e0cc8057b5a09fbf4ce36 90 Gene3D G3DSA:3.40.30.10 2 77 8.1E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS09130 12c4a210ebb521574bb07027a9c9d9eb 205 SUPERFAMILY SSF52266 20 199 1.48E-48 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC_RS09130 12c4a210ebb521574bb07027a9c9d9eb 205 Gene3D G3DSA:3.40.50.1110 20 200 6.5E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC_RS09130 12c4a210ebb521574bb07027a9c9d9eb 205 PANTHER PTHR30383 1 202 1.2E-45 T 22-04-2016 RPIC_RS09130 12c4a210ebb521574bb07027a9c9d9eb 205 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 RPIC_RS09130 12c4a210ebb521574bb07027a9c9d9eb 205 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 24 182 8.4E-24 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain RPIC_RS12945 522cd42091e0087e0e3523ea3cf6f226 266 PANTHER PTHR11941 1 263 3.8E-91 T 22-04-2016 RPIC_RS12945 522cd42091e0087e0e3523ea3cf6f226 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 266 9.5E-62 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RPIC_RS12945 522cd42091e0087e0e3523ea3cf6f226 266 SUPERFAMILY SSF52096 6 265 2.7E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS12945 522cd42091e0087e0e3523ea3cf6f226 266 PANTHER PTHR11941:SF54 1 263 3.8E-91 T 22-04-2016 RPIC_RS12945 522cd42091e0087e0e3523ea3cf6f226 266 Gene3D G3DSA:3.90.226.10 6 264 2.3E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS08250 9f1f50a014cb05ec30649bb80f0b1903 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 9.6E-22 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIC_RS08250 9f1f50a014cb05ec30649bb80f0b1903 92 PANTHER PTHR33677 1 92 1.1E-22 T 22-04-2016 RPIC_RS14465 9f1f50a014cb05ec30649bb80f0b1903 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 9.6E-22 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIC_RS14465 9f1f50a014cb05ec30649bb80f0b1903 92 PANTHER PTHR33677 1 92 1.1E-22 T 22-04-2016 RPIC_RS16900 686748920eb00701243c1f71e2b05b64 925 SUPERFAMILY SSF51445 103 272 2.74E-12 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC_RS16900 686748920eb00701243c1f71e2b05b64 925 PANTHER PTHR35882 103 778 2.6E-15 T 22-04-2016 RPIC_RS16900 686748920eb00701243c1f71e2b05b64 925 PIRSF PIRSF029570 8 924 0.0 T 22-04-2016 IPR016925 Uncharacterised conserved protein UCP029570 RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 SMART SM00382 31 226 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 PANTHER PTHR24220 3 250 4.6E-118 T 22-04-2016 RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 Gene3D G3DSA:3.40.50.300 1 231 1.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 Pfam PF00005 ABC transporter 22 177 1.7E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 PANTHER PTHR24220:SF534 3 250 4.6E-118 T 22-04-2016 RPIC_RS07245 0d4a6cdd7fae59b53a3ce5d0ea35c3a4 264 SUPERFAMILY SSF52540 1 232 1.04E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS05385 71ba80a6e6535ac97029ce25aa218f4f 285 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 218 2.7E-24 T 22-04-2016 RPIC_RS03110 870e39402848ff50c3766d705b0eebb7 184 SUPERFAMILY SSF51182 4 180 2.73E-77 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS03110 870e39402848ff50c3766d705b0eebb7 184 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 178 6.7E-82 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC_RS03110 870e39402848ff50c3766d705b0eebb7 184 Gene3D G3DSA:2.60.120.10 4 181 3.0E-82 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS03110 870e39402848ff50c3766d705b0eebb7 184 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 8 162 2.0E-67 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC_RS03110 870e39402848ff50c3766d705b0eebb7 184 PANTHER PTHR21047 7 177 5.3E-78 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC_RS03110 870e39402848ff50c3766d705b0eebb7 184 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 177 5.5E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 RPIC_RS12925 3ba90ed7f44746554a4c785c129943af 195 Gene3D G3DSA:2.10.109.10 47 115 1.8E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS12925 3ba90ed7f44746554a4c785c129943af 195 Gene3D G3DSA:2.10.109.10 153 192 1.8E-9 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain RPIC_RS12925 3ba90ed7f44746554a4c785c129943af 195 Pfam PF10502 Signal peptidase, peptidase S26 46 191 1.5E-54 T 22-04-2016 IPR019533 Peptidase S26 RPIC_RS12925 3ba90ed7f44746554a4c785c129943af 195 SUPERFAMILY SSF51306 67 190 2.25E-20 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C RPIC_RS04590 336db417d0e53e07ec1303aafdf78b6a 349 SUPERFAMILY SSF51445 12 313 4.53E-73 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC_RS04590 336db417d0e53e07ec1303aafdf78b6a 349 PANTHER PTHR30480 13 317 3.0E-97 T 22-04-2016 RPIC_RS04590 336db417d0e53e07ec1303aafdf78b6a 349 PANTHER PTHR30480:SF7 13 317 3.0E-97 T 22-04-2016 RPIC_RS04590 336db417d0e53e07ec1303aafdf78b6a 349 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 28 308 6.1E-68 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIC_RS04590 336db417d0e53e07ec1303aafdf78b6a 349 Gene3D G3DSA:3.20.20.300 13 313 5.0E-81 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 RPIC_RS04590 336db417d0e53e07ec1303aafdf78b6a 349 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 12 347 48.76 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 RPIC_RS00935 88046a648a3551f0ab6de516058c91ba 213 PIRSF PIRSF006324 1 210 9.7E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS00935 88046a648a3551f0ab6de516058c91ba 213 PANTHER PTHR30086 1 213 1.1E-67 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS00935 88046a648a3551f0ab6de516058c91ba 213 Pfam PF01810 LysE type translocator 16 205 4.6E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS00935 88046a648a3551f0ab6de516058c91ba 213 PANTHER PTHR30086:SF14 1 213 1.1E-67 T 22-04-2016 RPIC_RS16330 81f698434f8426d01be726fedde16d44 280 Pfam PF09906 Uncharacterized protein conserved in bacteria (DUF2135) 219 265 8.1E-19 T 22-04-2016 IPR019220 Domain of unknown function DUF2135 RPIC_RS16330 81f698434f8426d01be726fedde16d44 280 PIRSF PIRSF012281 1 279 7.5E-120 T 22-04-2016 IPR012039 Uncharacterised conserved protein UCP012281 RPIC_RS03695 d6d467cdf9f6d7138502de8e086a4c20 62 Pfam PF01361 Tautomerase enzyme 5 57 7.0E-13 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RPIC_RS03695 d6d467cdf9f6d7138502de8e086a4c20 62 PANTHER PTHR35530:SF1 1 62 1.0E-11 T 22-04-2016 RPIC_RS03695 d6d467cdf9f6d7138502de8e086a4c20 62 PANTHER PTHR35530 1 62 1.0E-11 T 22-04-2016 RPIC_RS03695 d6d467cdf9f6d7138502de8e086a4c20 62 SUPERFAMILY SSF55331 2 61 5.5E-19 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily RPIC_RS03695 d6d467cdf9f6d7138502de8e086a4c20 62 Gene3D G3DSA:3.30.429.20 1 61 1.1E-24 T 22-04-2016 RPIC_RS13820 facb94b025806695b7e744dd239d6391 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 138 3.3E-27 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 RPIC_RS13820 facb94b025806695b7e744dd239d6391 142 PANTHER PTHR30558:SF5 1 136 4.0E-27 T 22-04-2016 RPIC_RS13820 facb94b025806695b7e744dd239d6391 142 PANTHER PTHR30558 1 136 4.0E-27 T 22-04-2016 RPIC_RS09875 65e33643018355d57213935cf1410db3 277 Gene3D G3DSA:3.20.20.100 3 269 6.1E-81 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC_RS09875 65e33643018355d57213935cf1410db3 277 PRINTS PR00069 Aldo-keto reductase signature 125 142 1.6E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS09875 65e33643018355d57213935cf1410db3 277 PRINTS PR00069 Aldo-keto reductase signature 95 113 1.6E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS09875 65e33643018355d57213935cf1410db3 277 PRINTS PR00069 Aldo-keto reductase signature 199 223 1.6E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS09875 65e33643018355d57213935cf1410db3 277 PRINTS PR00069 Aldo-keto reductase signature 39 63 1.6E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RPIC_RS09875 65e33643018355d57213935cf1410db3 277 PANTHER PTHR11732 1 265 2.1E-112 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta RPIC_RS09875 65e33643018355d57213935cf1410db3 277 Pfam PF00248 Aldo/keto reductase family 15 264 1.2E-53 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC_RS09875 65e33643018355d57213935cf1410db3 277 SUPERFAMILY SSF51430 4 267 5.63E-82 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain RPIC_RS07495 155eb9c505e0236fab283a62380961db 205 Pfam PF14348 Domain of unknown function (DUF4400) 26 202 4.5E-39 T 22-04-2016 IPR022266 Integrating conjugative element protein, PFL4697-type RPIC_RS13590 ab23bb3f79d4696da9a219e91950730a 155 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 72 135 1.3E-17 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor RPIC_RS13590 ab23bb3f79d4696da9a219e91950730a 155 SUPERFAMILY SSF141488 67 148 2.48E-20 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 Gene3D G3DSA:1.20.1560.10 24 348 6.7E-71 T 22-04-2016 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 PANTHER PTHR24221:SF18 2 605 0.0 T 22-04-2016 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 Gene3D G3DSA:3.40.50.300 360 591 8.7E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 PANTHER PTHR24221 2 605 0.0 T 22-04-2016 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 Pfam PF00664 ABC transporter transmembrane region 39 311 3.1E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 SUPERFAMILY SSF90123 24 338 2.35E-66 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 SUPERFAMILY SSF52540 349 595 1.97E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 Pfam PF00005 ABC transporter 378 525 5.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RPIC_RS01735 0042ecaedd437bcd66b7ab317a8d9ba2 612 SMART SM00382 385 571 2.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain RPIC_RS17605 94dca1f83a9accbb6f142c1af9c74df9 75 Pfam PF12512 Protein of unknown function (DUF3717) 6 70 4.4E-29 T 22-04-2016 IPR022191 Protein of unknown function DUF3717 RPIC_RS13250 078fd7246450d6f0b72e8443b41efe40 257 Pfam PF01925 Sulfite exporter TauE/SafE 7 255 5.0E-44 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS13250 078fd7246450d6f0b72e8443b41efe40 257 PANTHER PTHR30269:SF2 1 256 2.0E-52 T 22-04-2016 RPIC_RS13250 078fd7246450d6f0b72e8443b41efe40 257 PANTHER PTHR30269 1 256 2.0E-52 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 RPIC_RS05270 5ff988cb3c0d795c12d2406372cd0f2a 211 PANTHER PTHR38035 2 210 4.6E-37 T 22-04-2016 RPIC_RS05270 5ff988cb3c0d795c12d2406372cd0f2a 211 Pfam PF09976 Tetratricopeptide repeat-like domain 15 209 7.9E-66 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain RPIC_RS05270 5ff988cb3c0d795c12d2406372cd0f2a 211 PIRSF PIRSF006170 1 211 2.1E-59 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 RPIC_RS11855 d0c94b44b1dc6d14b0bd912b19cfa3a5 232 Gene3D G3DSA:2.60.120.10 3 231 2.3E-75 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS11855 d0c94b44b1dc6d14b0bd912b19cfa3a5 232 PANTHER PTHR13903 1 232 3.8E-115 T 22-04-2016 IPR012093 Pirin RPIC_RS11855 d0c94b44b1dc6d14b0bd912b19cfa3a5 232 SUPERFAMILY SSF51182 1 231 2.23E-77 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS11855 d0c94b44b1dc6d14b0bd912b19cfa3a5 232 Pfam PF02678 Pirin 9 119 1.5E-36 T 22-04-2016 IPR003829 Pirin, N-terminal domain RPIC_RS11855 d0c94b44b1dc6d14b0bd912b19cfa3a5 232 PANTHER PTHR13903:SF7 1 232 3.8E-115 T 22-04-2016 RPIC_RS11855 d0c94b44b1dc6d14b0bd912b19cfa3a5 232 PIRSF PIRSF006232 1 230 1.5E-54 T 22-04-2016 IPR012093 Pirin RPIC_RS19400 ac27ebe9b7670cd90c1a680e16eef84e 73 Pfam PF07730 Histidine kinase 1 58 3.1E-10 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RPIC_RS02275 ff0a06e7b964fce6078fca07821c3d5a 102 Pfam PF04341 Protein of unknown function, DUF485 11 97 1.6E-34 T 22-04-2016 IPR007436 Protein of unknown function DUF485 RPIC_RS02275 ff0a06e7b964fce6078fca07821c3d5a 102 PANTHER PTHR38598 2 102 4.1E-38 T 22-04-2016 RPIC_RS13675 982e5f56f834cefef25480a27f6b16d8 436 Pfam PF13657 HipA N-terminal domain 2 70 2.9E-10 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 RPIC_RS03250 cc524ed74231c43c23ad7399626860ba 190 Pfam PF12019 Type II transport protein GspH 46 167 6.2E-9 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 RPIC_RS03250 cc524ed74231c43c23ad7399626860ba 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 5.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS03250 cc524ed74231c43c23ad7399626860ba 190 SUPERFAMILY SSF54523 10 94 7.53E-13 T 22-04-2016 RPIC_RS03250 cc524ed74231c43c23ad7399626860ba 190 Gene3D G3DSA:3.30.700.10 10 67 1.2E-4 T 22-04-2016 RPIC_RS01420 6d1485352f1af02693ede86631413607 86 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 7 86 5.1E-33 T 22-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 RPIC_RS01420 6d1485352f1af02693ede86631413607 86 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 85 1.7E-15 T 22-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 RPIC_RS08865 4b7ed1ec60980f1c2261998489b699e1 433 SUPERFAMILY SSF56954 5 417 1.01E-46 T 22-04-2016 RPIC_RS08865 4b7ed1ec60980f1c2261998489b699e1 433 Pfam PF02321 Outer membrane efflux protein 36 220 6.0E-12 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08865 4b7ed1ec60980f1c2261998489b699e1 433 Pfam PF02321 Outer membrane efflux protein 251 417 4.0E-16 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 RPIC_RS08865 4b7ed1ec60980f1c2261998489b699e1 433 Gene3D G3DSA:1.20.1600.10 31 413 6.3E-30 T 22-04-2016 RPIC_RS09895 fb5c9ccf1b0113963bcc04953d0f5e02 213 Pfam PF01810 LysE type translocator 22 207 1.9E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS09895 fb5c9ccf1b0113963bcc04953d0f5e02 213 PANTHER PTHR30086 7 213 2.0E-72 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 RPIC_RS09895 fb5c9ccf1b0113963bcc04953d0f5e02 213 PANTHER PTHR30086:SF0 7 213 2.0E-72 T 22-04-2016 RPIC_RS09190 23a24f3cd31f7b7494e872d4df846f81 141 Gene3D G3DSA:3.40.630.30 48 140 4.6E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS09190 23a24f3cd31f7b7494e872d4df846f81 141 SUPERFAMILY SSF55729 40 141 1.8E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS09190 23a24f3cd31f7b7494e872d4df846f81 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 119 5.8E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS18430 a363c8d126861fd14b877bc33140a013 70 Pfam PF13490 Putative zinc-finger 10 43 2.7E-5 T 22-04-2016 IPR027383 Putative zinc-finger RPIC_RS11190 911e10d875dd5fb7fa1a542c8a43f4b8 277 PANTHER PTHR22911 6 270 7.0E-60 T 22-04-2016 RPIC_RS11190 911e10d875dd5fb7fa1a542c8a43f4b8 277 Pfam PF00892 EamA-like transporter family 6 130 2.5E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS11190 911e10d875dd5fb7fa1a542c8a43f4b8 277 Pfam PF00892 EamA-like transporter family 142 273 1.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 RPIC_RS11190 911e10d875dd5fb7fa1a542c8a43f4b8 277 SUPERFAMILY SSF103481 38 134 2.75E-12 T 22-04-2016 RPIC_RS11190 911e10d875dd5fb7fa1a542c8a43f4b8 277 SUPERFAMILY SSF103481 178 274 5.89E-11 T 22-04-2016 RPIC_RS11190 911e10d875dd5fb7fa1a542c8a43f4b8 277 PANTHER PTHR22911:SF61 6 270 7.0E-60 T 22-04-2016 RPIC_RS17505 3bcc41a53bce18526810ea9d433f1f48 125 Gene3D G3DSA:2.60.120.10 7 109 7.0E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold RPIC_RS17505 3bcc41a53bce18526810ea9d433f1f48 125 PANTHER PTHR36114 12 121 4.5E-19 T 22-04-2016 RPIC_RS17505 3bcc41a53bce18526810ea9d433f1f48 125 Pfam PF07883 Cupin domain 41 92 2.0E-11 T 22-04-2016 IPR013096 Cupin 2, conserved barrel RPIC_RS17505 3bcc41a53bce18526810ea9d433f1f48 125 SUPERFAMILY SSF51182 6 114 1.57E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain RPIC_RS19105 96becc63abc49bbef060309dbce81ab3 261 SUPERFAMILY SSF49464 37 111 4.84E-5 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain RPIC_RS02685 ecab8c8d9ae450c9447c8a11e1c3aecc 287 Pfam PF05368 NmrA-like family 3 221 8.1E-32 T 22-04-2016 IPR008030 NmrA-like domain RPIC_RS02685 ecab8c8d9ae450c9447c8a11e1c3aecc 287 SUPERFAMILY SSF51735 2 254 2.35E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS02685 ecab8c8d9ae450c9447c8a11e1c3aecc 287 PANTHER PTHR14194 1 284 2.6E-50 T 22-04-2016 RPIC_RS02685 ecab8c8d9ae450c9447c8a11e1c3aecc 287 Gene3D G3DSA:3.40.50.720 1 219 4.0E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS17395 5e52c34d0d2bdea980fb61cf6789815f 799 PANTHER PTHR38731 7 560 3.7E-12 T 22-04-2016 RPIC_RS17395 5e52c34d0d2bdea980fb61cf6789815f 799 PANTHER PTHR38731:SF1 7 560 3.7E-12 T 22-04-2016 RPIC_RS17395 5e52c34d0d2bdea980fb61cf6789815f 799 Pfam PF04773 FecR protein 83 173 2.5E-4 T 22-04-2016 IPR006860 FecR protein RPIC_RS10455 2f903edcabb1094b9ade50e373769d70 136 PANTHER PTHR36505:SF2 4 129 3.0E-17 T 22-04-2016 RPIC_RS10455 2f903edcabb1094b9ade50e373769d70 136 PANTHER PTHR36505 4 129 3.0E-17 T 22-04-2016 RPIC_RS10455 2f903edcabb1094b9ade50e373769d70 136 Gene3D G3DSA:2.30.30.240 49 111 1.7E-11 T 22-04-2016 RPIC_RS10455 2f903edcabb1094b9ade50e373769d70 136 Pfam PF05239 PRC-barrel domain 50 113 1.3E-12 T 22-04-2016 IPR027275 PRC-barrel domain RPIC_RS10455 2f903edcabb1094b9ade50e373769d70 136 SUPERFAMILY SSF50346 39 132 2.35E-17 T 22-04-2016 IPR011033 PRC-barrel-like RPIC_RS02065 9e4387b041fde3591cc6411111a8a620 344 PANTHER PTHR39573:SF1 8 343 4.2E-140 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RPIC_RS02065 9e4387b041fde3591cc6411111a8a620 344 SUPERFAMILY SSF56112 12 344 2.48E-79 T 22-04-2016 IPR011009 Protein kinase-like domain RPIC_RS02065 9e4387b041fde3591cc6411111a8a620 344 Gene3D G3DSA:3.90.1200.10 112 343 1.5E-56 T 22-04-2016 RPIC_RS02065 9e4387b041fde3591cc6411111a8a620 344 Pfam PF01636 Phosphotransferase enzyme family 42 283 8.8E-37 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase RPIC_RS02065 9e4387b041fde3591cc6411111a8a620 344 PANTHER PTHR39573 8 343 4.2E-140 T 22-04-2016 RPIC_RS02065 9e4387b041fde3591cc6411111a8a620 344 Hamap MF_01497 Stress response kinase A [srkA]. 10 339 47.095 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 Pfam PF07993 Male sterility protein 5 233 2.6E-24 T 22-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 PANTHER PTHR10366:SF382 2 289 8.7E-53 T 22-04-2016 RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 PANTHER PTHR10366:SF382 314 351 8.7E-53 T 22-04-2016 RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 PANTHER PTHR10366 2 289 8.7E-53 T 22-04-2016 RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 PANTHER PTHR10366 314 351 8.7E-53 T 22-04-2016 RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 Gene3D G3DSA:3.40.50.720 1 275 1.1E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 Gene3D G3DSA:3.40.50.720 316 349 1.1E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 SUPERFAMILY SSF51735 1 267 5.54E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS06690 8728e1d08cfb38031e4f9c4e8bb6e354 367 SUPERFAMILY SSF51735 316 351 5.54E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain RPIC_RS01785 0fe122e858919c2f0529288826f3a391 266 Pfam PF11227 Protein of unknown function (DUF3025) 56 258 1.7E-76 T 22-04-2016 IPR021390 Protein of unknown function DUF3025 RPIC_RS00270 a16b7c38fd0f5fc9664288e3c1cf8c6c 387 PANTHER PTHR30294 9 384 6.6E-102 T 22-04-2016 RPIC_RS00270 a16b7c38fd0f5fc9664288e3c1cf8c6c 387 PANTHER PTHR30294:SF12 9 384 6.6E-102 T 22-04-2016 RPIC_RS00270 a16b7c38fd0f5fc9664288e3c1cf8c6c 387 Pfam PF12698 ABC-2 family transporter protein 30 379 9.3E-44 T 22-04-2016 RPIC_RS06895 afa693f1148cbf1e8e63d5cd62eff906 102 Pfam PF10734 Protein of unknown function (DUF2523) 8 86 5.5E-20 T 22-04-2016 IPR019670 Protein of unkown function DUF2523 RPIC_RS16200 f34d4f4a7133a6c94266aaacf992b92e 118 PANTHER PTHR12899 1 118 3.5E-34 T 22-04-2016 RPIC_RS16200 f34d4f4a7133a6c94266aaacf992b92e 118 SUPERFAMILY SSF53137 3 116 1.57E-49 T 22-04-2016 RPIC_RS16200 f34d4f4a7133a6c94266aaacf992b92e 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 118 9.2E-37 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16200 f34d4f4a7133a6c94266aaacf992b92e 118 Gene3D G3DSA:3.30.420.100 24 118 5.1E-35 T 22-04-2016 RPIC_RS16200 f34d4f4a7133a6c94266aaacf992b92e 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 118 26.027 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS16200 f34d4f4a7133a6c94266aaacf992b92e 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 118 1.6E-35 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RPIC_RS13485 3f51d2ef2f890a485c7d63e8ab0097c8 206 Pfam PF13548 Domain of unknown function (DUF4126) 6 176 3.4E-59 T 22-04-2016 IPR025196 Domain of unknown function DUF4126 RPIC_RS07530 959e62fc75bbd573788420863f3831c2 815 Gene3D G3DSA:3.40.50.300 641 737 7.3E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07530 959e62fc75bbd573788420863f3831c2 815 Gene3D G3DSA:3.40.50.300 462 601 7.3E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07530 959e62fc75bbd573788420863f3831c2 815 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 202 406 4.5E-9 T 22-04-2016 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 RPIC_RS07530 959e62fc75bbd573788420863f3831c2 815 SUPERFAMILY SSF52540 455 752 2.15E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07990 a634067950cd24b88f0ef6094478c2aa 405 PANTHER PTHR38730 1 399 1.4E-42 T 22-04-2016 RPIC_RS07990 a634067950cd24b88f0ef6094478c2aa 405 PANTHER PTHR38730:SF1 1 399 1.4E-42 T 22-04-2016 RPIC_RS07990 a634067950cd24b88f0ef6094478c2aa 405 Pfam PF09967 VWA-like domain (DUF2201) 278 402 1.8E-23 T 22-04-2016 IPR018698 VWA-like domain RPIC_RS07990 a634067950cd24b88f0ef6094478c2aa 405 Pfam PF13203 Putative metallopeptidase domain 10 269 6.4E-45 T 22-04-2016 IPR025154 Putative metallopeptidase domain RPIC_RS08780 98001d6244495f81e18cbd8d63cfd7f4 66 Pfam PF02627 Carboxymuconolactone decarboxylase family 1 46 6.2E-6 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RPIC_RS08780 98001d6244495f81e18cbd8d63cfd7f4 66 Gene3D G3DSA:1.20.1290.10 1 55 1.8E-11 T 22-04-2016 IPR029032 AhpD-like RPIC_RS08780 98001d6244495f81e18cbd8d63cfd7f4 66 SUPERFAMILY SSF69118 1 53 8.39E-9 T 22-04-2016 IPR029032 AhpD-like RPIC_RS17355 776ef4297729b77bcee6b482e40477d3 309 PANTHER PTHR21624:SF1 69 279 8.4E-79 T 22-04-2016 RPIC_RS17355 776ef4297729b77bcee6b482e40477d3 309 PANTHER PTHR21624 69 279 8.4E-79 T 22-04-2016 RPIC_RS17355 776ef4297729b77bcee6b482e40477d3 309 Pfam PF04116 Fatty acid hydroxylase superfamily 87 220 9.8E-29 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 117 8.6E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 Gene3D G3DSA:2.40.40.20 1 119 4.3E-54 T 22-04-2016 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 SUPERFAMILY SSF50692 1 117 1.62E-49 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 PANTHER PTHR21012:SF0 2 117 4.8E-64 T 22-04-2016 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 PIRSF PIRSF006246 1 120 5.8E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 2.0E-46 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 120 72.002 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 Pfam PF02261 Aspartate decarboxylase 1 114 9.8E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC_RS14625 23fa5e728b5d71ef02e4158b852c4649 120 PANTHER PTHR21012 2 117 4.8E-64 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 RPIC_RS11100 09b62c5e836feedc3d723f1b59c48c7d 418 Pfam PF06181 Protein of unknown function (DUF989) 4 298 1.2E-142 T 22-04-2016 IPR010389 Domain of unknown function DUF989 RPIC_RS11100 09b62c5e836feedc3d723f1b59c48c7d 418 SUPERFAMILY SSF46626 324 416 1.15E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS13210 2aa86351771486ea5904fab791501d42 123 SUPERFAMILY SSF53800 4 119 1.96E-28 T 22-04-2016 RPIC_RS13210 2aa86351771486ea5904fab791501d42 123 Pfam PF01903 CbiX 11 114 6.8E-23 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 RPIC_RS13210 2aa86351771486ea5904fab791501d42 123 PANTHER PTHR33542 4 114 8.4E-17 T 22-04-2016 RPIC_RS13210 2aa86351771486ea5904fab791501d42 123 Gene3D G3DSA:3.40.50.1400 3 119 4.3E-32 T 22-04-2016 RPIC_RS06215 3659566ee43588786d75d58f15cddbf5 320 PANTHER PTHR10188 1 320 7.7E-134 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RPIC_RS06215 3659566ee43588786d75d58f15cddbf5 320 Pfam PF01112 Asparaginase 4 319 1.1E-119 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 RPIC_RS06215 3659566ee43588786d75d58f15cddbf5 320 SUPERFAMILY SSF56235 185 318 2.39E-96 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS06215 3659566ee43588786d75d58f15cddbf5 320 SUPERFAMILY SSF56235 3 155 2.39E-96 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal RPIC_RS06215 3659566ee43588786d75d58f15cddbf5 320 PANTHER PTHR10188:SF22 1 320 7.7E-134 T 22-04-2016 RPIC_RS09635 9f984b8d4a0e115267000c17f8e0392c 96 SUPERFAMILY SSF160272 1 79 4.97E-13 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC_RS09635 9f984b8d4a0e115267000c17f8e0392c 96 Pfam PF07369 Protein of unknown function (DUF1488) 3 75 1.4E-14 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC_RS09635 9f984b8d4a0e115267000c17f8e0392c 96 Gene3D G3DSA:3.30.160.140 1 78 6.2E-11 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 RPIC_RS06330 91cf77c5e6fb56a0e4a715bdaa892438 373 Gene3D G3DSA:3.40.50.1820 18 362 2.9E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS06330 91cf77c5e6fb56a0e4a715bdaa892438 373 PANTHER PTHR35560:SF1 64 360 5.5E-56 T 22-04-2016 RPIC_RS06330 91cf77c5e6fb56a0e4a715bdaa892438 373 PANTHER PTHR35560 64 360 5.5E-56 T 22-04-2016 RPIC_RS06330 91cf77c5e6fb56a0e4a715bdaa892438 373 SUPERFAMILY SSF53474 63 293 1.39E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS11670 ad42afdf3e945faf1ec224f51210d189 341 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 50 299 1.8E-32 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 RPIC_RS11670 ad42afdf3e945faf1ec224f51210d189 341 PANTHER PTHR33376 4 339 3.8E-44 T 22-04-2016 RPIC_RS17525 e6d7f1f422b7d0a3f63b6680e50d82c9 328 PANTHER PTHR30482 14 320 1.9E-105 T 22-04-2016 RPIC_RS17525 e6d7f1f422b7d0a3f63b6680e50d82c9 328 PANTHER PTHR30482:SF8 14 320 1.9E-105 T 22-04-2016 RPIC_RS17525 e6d7f1f422b7d0a3f63b6680e50d82c9 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 279 2.3E-32 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 Gene3D G3DSA:1.10.12.10 279 337 1.0E-7 T 22-04-2016 IPR014748 Crontonase, C-terminal RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 PANTHER PTHR11941 259 336 2.4E-111 T 22-04-2016 RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 PANTHER PTHR11941 2 198 2.4E-111 T 22-04-2016 RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 Gene3D G3DSA:3.90.226.10 16 203 1.7E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 353 4.3E-126 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 PANTHER PTHR11941:SF53 259 336 2.4E-111 T 22-04-2016 RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 PANTHER PTHR11941:SF53 2 198 2.4E-111 T 22-04-2016 RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 SUPERFAMILY SSF52096 268 338 3.19E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS05620 3c70998bd1c099251b1a973d20d74f8c 369 SUPERFAMILY SSF52096 16 203 3.19E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 SUPERFAMILY SSF56349 110 388 6.18E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 Pfam PF13356 Domain of unknown function (DUF4102) 8 92 1.6E-18 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 Gene3D G3DSA:1.10.150.130 110 202 8.3E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 PANTHER PTHR30629 5 397 2.1E-89 T 22-04-2016 RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 PANTHER PTHR30629:SF2 5 397 2.1E-89 T 22-04-2016 RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 Pfam PF00589 Phage integrase family 236 378 3.9E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS13550 64ab680dce939bcb23e425c7c73fc0d0 415 Gene3D G3DSA:1.10.443.10 213 386 7.6E-26 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RPIC_RS05705 4f5c5c28c303559ab0489bd88c95b03f 402 Pfam PF05159 Capsule polysaccharide biosynthesis protein 73 380 1.9E-105 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 RPIC_RS07790 80a25056ff370a1358030601f3c5ca23 356 Pfam PF06527 TniQ 13 155 1.4E-28 T 22-04-2016 IPR009492 TniQ RPIC_RS13535 ba4c690799818c0eb19af5512b156c21 111 Pfam PF14090 Helix-turn-helix domain 31 97 1.3E-20 T 22-04-2016 RPIC_RS00970 98c5d6b65ec86f16baf1fdbf520361ad 431 Pfam PF08886 Glutamate-cysteine ligase 17 422 3.0E-201 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RPIC_RS00970 98c5d6b65ec86f16baf1fdbf520361ad 431 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 425 3.7E-213 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 Gene3D G3DSA:1.10.390.10 313 467 2.4E-30 T 22-04-2016 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 SUPERFAMILY SSF63737 10 197 6.67E-41 T 22-04-2016 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 5.4E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PANTHER PTHR11533:SF152 3 611 0.0 T 22-04-2016 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PANTHER PTHR11533:SF152 635 899 0.0 T 22-04-2016 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PANTHER PTHR11533 3 611 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 PANTHER PTHR11533 635 899 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 SUPERFAMILY SSF55486 212 467 1.1E-70 T 22-04-2016 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 Gene3D G3DSA:1.25.50.10 572 900 1.7E-135 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 Pfam PF01433 Peptidase family M1 63 400 2.4E-58 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 14 899 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 RPIC_RS11150 81a8d762ceec0882e90cb43e7bdafd92 900 Pfam PF11940 Domain of unknown function (DUF3458) 475 857 3.6E-152 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal RPIC_RS23525 a52a02979dcbebab544884b7b9098c70 212 SUPERFAMILY SSF52540 7 34 5.93E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS23525 a52a02979dcbebab544884b7b9098c70 212 Gene3D G3DSA:3.40.50.300 4 50 1.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS08175 39e37cc955bc6e60cb83b786a4347617 513 PANTHER PTHR30489 1 406 2.1E-41 T 22-04-2016 RPIC_RS08175 39e37cc955bc6e60cb83b786a4347617 513 Pfam PF02687 FtsX-like permease family 268 396 3.3E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC_RS08175 39e37cc955bc6e60cb83b786a4347617 513 Pfam PF12704 MacB-like periplasmic core domain 18 236 1.7E-13 T 22-04-2016 IPR025857 MacB-like periplasmic core domain RPIC_RS10615 6c2eb63d6025bcf0dd4320aa90d728ed 403 Pfam PF11062 Protein of unknown function (DUF2863) 5 402 8.0E-181 T 22-04-2016 IPR021292 Protein of unknown function DUF2863 RPIC_RS01320 709a546081a1e553d907f13060fb6f8a 134 Pfam PF13467 Ribbon-helix-helix domain 17 83 1.2E-25 T 22-04-2016 IPR027373 Ribbon-helix-helix domain RPIC_RS13650 bf3dde89ab072fd202fdf5ad2515c0a7 295 PANTHER PTHR30168 2 294 1.6E-129 T 22-04-2016 RPIC_RS13650 bf3dde89ab072fd202fdf5ad2515c0a7 295 Pfam PF04228 Putative neutral zinc metallopeptidase 2 289 1.7E-121 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RPIC_RS12740 eaa6e737a4c96c8f35003e88c70b6594 83 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 20 81 4.2E-16 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing RPIC_RS12740 eaa6e737a4c96c8f35003e88c70b6594 83 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 22 41 6.5E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC_RS16690 17ac8e635253e4bd6ed50b1364c08e0a 103 Gene3D G3DSA:4.10.490.10 30 103 1.2E-33 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 RPIC_RS16690 17ac8e635253e4bd6ed50b1364c08e0a 103 Pfam PF01355 High potential iron-sulfur protein 36 100 2.6E-26 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 RPIC_RS16690 17ac8e635253e4bd6ed50b1364c08e0a 103 SUPERFAMILY SSF57652 25 103 5.49E-28 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 RPIC_RS11465 99c67bedf65c1b9009cd726a35fc6bf1 158 Pfam PF05866 Endodeoxyribonuclease RusA 9 141 3.4E-26 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RPIC_RS11465 99c67bedf65c1b9009cd726a35fc6bf1 158 SUPERFAMILY SSF103084 1 142 2.22E-15 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RPIC_RS11465 99c67bedf65c1b9009cd726a35fc6bf1 158 Gene3D G3DSA:3.30.1330.70 3 144 4.5E-28 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RPIC_RS02915 e62acaa780149c66c07a8fd5c96b4ec0 409 Pfam PF09594 Protein of unknown function (DUF2029) 87 316 4.3E-36 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIC_RS10365 7c4498d66e553c65bdb8011bffccc0dd 58 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 20 52 2.0E-8 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 RPIC_RS10980 f181d2f64042698e31ed278d1cc183c6 174 Pfam PF06271 RDD family 20 168 3.2E-25 T 22-04-2016 IPR010432 RDD RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 38 236 1.2E-15 T 22-04-2016 RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 Gene3D G3DSA:3.50.50.60 329 515 9.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 Gene3D G3DSA:3.50.50.60 35 240 7.3E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 PANTHER PTHR23023:SF132 31 520 7.6E-233 T 22-04-2016 RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 SUPERFAMILY SSF51905 35 255 1.73E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 SUPERFAMILY SSF51905 322 440 1.73E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RPIC_RS16635 450496f3732ed47cbcb202abc7a2e9c8 548 PANTHER PTHR23023 31 520 7.6E-233 T 22-04-2016 RPIC_RS04880 44b8b9afbecc969f4c1266d1e21f67bf 398 Pfam PF06804 NlpB/DapX lipoprotein 47 392 3.7E-52 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein RPIC_RS14900 fde1b01185403df265ab5774abf79150 207 SUPERFAMILY SSF53474 5 191 1.86E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS14900 fde1b01185403df265ab5774abf79150 207 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 192 2.5E-67 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA RPIC_RS14900 fde1b01185403df265ab5774abf79150 207 PANTHER PTHR35602 1 197 2.6E-62 T 22-04-2016 RPIC_RS14900 fde1b01185403df265ab5774abf79150 207 PANTHER PTHR35602:SF3 1 197 2.6E-62 T 22-04-2016 RPIC_RS14900 fde1b01185403df265ab5774abf79150 207 Gene3D G3DSA:3.40.50.1820 5 187 2.9E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold RPIC_RS09035 4de8f09f15d2b221608e945ad39b7c02 108 PANTHER PTHR37310 4 105 5.8E-18 T 22-04-2016 RPIC_RS09035 4de8f09f15d2b221608e945ad39b7c02 108 Pfam PF03860 Domain of Unknown Function (DUF326) 87 105 6.8E-5 T 22-04-2016 IPR005560 Protein of unknown function DUF326 RPIC_RS08455 f95c1b87e3cc8c55b0a7ddaa4a8f33b0 162 Pfam PF04214 Protein of unknown function, DUF 64 132 4.9E-29 T 22-04-2016 IPR007332 Protein of unknown function DUF411 RPIC_RS08455 f95c1b87e3cc8c55b0a7ddaa4a8f33b0 162 SUPERFAMILY SSF52833 31 113 8.15E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795:SF419 427 491 1.2E-50 T 22-04-2016 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795:SF419 72 194 1.2E-50 T 22-04-2016 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795:SF419 3 54 1.2E-50 T 22-04-2016 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795:SF419 228 404 1.2E-50 T 22-04-2016 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 Pfam PF00082 Subtilase family 163 470 4.1E-31 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795 427 491 1.2E-50 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795 72 194 1.2E-50 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795 3 54 1.2E-50 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PANTHER PTHR10795 228 404 1.2E-50 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 239 249 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 SUPERFAMILY SSF52743 148 197 4.19E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 SUPERFAMILY SSF52743 232 497 4.19E-57 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 Gene3D G3DSA:3.40.50.200 103 495 6.1E-63 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 235 248 1.7E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 428 444 1.7E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 PRINTS PR00723 Subtilisin serine protease family (S8) signature 162 181 1.7E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related RPIC_RS14240 f27c6e9a0fc1812937fedc815bc32e58 547 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 429 439 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site RPIC_RS18350 e6eb8a8ba593001faf3d90d295e51d65 172 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 4 123 5.1E-8 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RPIC_RS04530 5e53d15c445dec106cf7faef65d1e512 210 SUPERFAMILY SSF89069 15 81 4.58E-13 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RPIC_RS04530 5e53d15c445dec106cf7faef65d1e512 210 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 15 99 1.4E-17 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 RPIC_RS00445 84231b66544409ebf88e51b52b4719e2 182 PANTHER PTHR23091:SF243 1 159 3.7E-14 T 22-04-2016 RPIC_RS00445 84231b66544409ebf88e51b52b4719e2 182 Gene3D G3DSA:3.40.630.30 4 175 5.3E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS00445 84231b66544409ebf88e51b52b4719e2 182 Pfam PF00583 Acetyltransferase (GNAT) family 71 149 3.9E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS00445 84231b66544409ebf88e51b52b4719e2 182 PANTHER PTHR23091 1 159 3.7E-14 T 22-04-2016 RPIC_RS00445 84231b66544409ebf88e51b52b4719e2 182 SUPERFAMILY SSF55729 6 175 6.8E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS12760 17e132229bc30bd2529c4dd5077daba1 179 Pfam PF11749 Protein of unknown function (DUF3305) 19 166 1.5E-53 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 RPIC_RS12830 e0af8a3179322c4e525dfb0efc381058 397 Gene3D G3DSA:3.60.15.10 5 162 9.1E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12830 e0af8a3179322c4e525dfb0efc381058 397 SUPERFAMILY SSF56281 4 181 1.51E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12830 e0af8a3179322c4e525dfb0efc381058 397 SUPERFAMILY SSF56281 217 282 1.51E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS23260 f3b5ceb61fd09c1e83220a3553ffe8ce 118 Gene3D G3DSA:3.30.450.20 1 20 3.7E-5 T 22-04-2016 RPIC_RS23260 f3b5ceb61fd09c1e83220a3553ffe8ce 118 Pfam PF17200 Single Cache domain 2 2 24 9.3E-6 T 22-04-2016 IPR033480 Single Cache domain 2 RPIC_RS03140 a1efa4e644ed761a3e78f6ac48d4f080 226 Pfam PF03724 META domain 104 214 4.9E-21 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ RPIC_RS13335 a355c7cf01ebd197d133fe259f4da2c1 375 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 347 5.6E-51 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS13335 a355c7cf01ebd197d133fe259f4da2c1 375 PANTHER PTHR30482:SF10 1 363 7.4E-112 T 22-04-2016 RPIC_RS13335 a355c7cf01ebd197d133fe259f4da2c1 375 PANTHER PTHR30482 1 363 7.4E-112 T 22-04-2016 RPIC_RS03965 14b0bdfb286c2b5bb734b029e3b33c26 313 PANTHER PTHR38684 2 267 4.1E-27 T 22-04-2016 RPIC_RS03965 14b0bdfb286c2b5bb734b029e3b33c26 313 PANTHER PTHR38684 284 313 4.1E-27 T 22-04-2016 RPIC_RS03965 14b0bdfb286c2b5bb734b029e3b33c26 313 Pfam PF03186 CobD/Cbib protein 28 255 5.1E-23 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC_RS03965 14b0bdfb286c2b5bb734b029e3b33c26 313 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 313 63.747 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 RPIC_RS13980 cc1e1df8321bbc366861cc12d8f3e964 176 Gene3D G3DSA:3.40.630.30 4 164 2.1E-62 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS13980 cc1e1df8321bbc366861cc12d8f3e964 176 SUPERFAMILY SSF55729 10 156 3.55E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS13980 cc1e1df8321bbc366861cc12d8f3e964 176 Pfam PF00583 Acetyltransferase (GNAT) family 63 143 5.9E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS13980 cc1e1df8321bbc366861cc12d8f3e964 176 PANTHER PTHR10545 10 167 5.2E-68 T 22-04-2016 RPIC_RS04415 910ff98a5b7f7859460b92cb6d003b12 469 Pfam PF16980 Putative citrate transport 24 468 2.4E-195 T 22-04-2016 IPR031566 Putative citrate transporter RPIC_RS12905 d804945c4d061322a38896436a35132d 282 Pfam PF10134 Replication initiator protein A 28 257 1.9E-93 T 22-04-2016 IPR018777 Replication initiator protein A RPIC_RS01490 f8912eb81f5ef5def4d3326949910e7d 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 44 195 1.0E-6 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like RPIC_RS01490 f8912eb81f5ef5def4d3326949910e7d 198 SUPERFAMILY SSF89392 32 194 1.06E-17 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX RPIC_RS01490 f8912eb81f5ef5def4d3326949910e7d 198 Gene3D G3DSA:2.50.20.10 33 195 3.2E-18 T 22-04-2016 RPIC_RS12785 5d2dc633e960481159ca6b42faa46d73 1304 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 963 1304 2.8E-57 T 22-04-2016 IPR007452 Translocation and assembly module TamB RPIC_RS12785 5d2dc633e960481159ca6b42faa46d73 1304 PANTHER PTHR36985 12 1304 4.6E-65 T 22-04-2016 RPIC_RS14350 eb9ffaac1bf097a0d06f30c7df03cad6 189 Pfam PF14341 PilX N-terminal 13 63 2.5E-8 T 22-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain RPIC_RS16500 ab814116dd3050b4e383e7c87b1a6ca7 93 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 4 92 5.3E-38 T 22-04-2016 IPR018678 Protein of unknown function DUF2160, transmembrane RPIC_RS17390 fc057d19e5320ba3daa26139bf73063b 380 Gene3D G3DSA:3.90.640.20 293 377 5.1E-12 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 RPIC_RS17390 fc057d19e5320ba3daa26139bf73063b 380 Pfam PF11738 Protein of unknown function (DUF3298) 292 366 1.2E-10 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 RPIC_RS00980 75a71a618ee9938849154354af2edfa7 151 PANTHER PTHR33799 2 137 1.0E-25 T 22-04-2016 RPIC_RS00980 75a71a618ee9938849154354af2edfa7 151 PANTHER PTHR33799:SF1 2 137 1.0E-25 T 22-04-2016 RPIC_RS00980 75a71a618ee9938849154354af2edfa7 151 Gene3D G3DSA:3.40.50.510 1 128 3.1E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIC_RS00980 75a71a618ee9938849154354af2edfa7 151 Pfam PF03610 PTS system fructose IIA component 3 107 3.8E-17 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIC_RS00980 75a71a618ee9938849154354af2edfa7 151 SUPERFAMILY SSF53062 1 127 9.42E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RPIC_RS16355 f5fe77766f2acbbc13dbd6a213f7f385 616 Pfam PF09909 Uncharacterized protein conserved in bacteria (DUF2138) 6 570 5.6E-236 T 22-04-2016 IPR018671 Protein of unknown function DUF2138 RPIC_RS11355 c6a2e44da5afdb3d9b0b469e122c68a8 709 Pfam PF16510 Phage P22-like portal protein 54 668 4.8E-51 T 22-04-2016 IPR032427 Phage P22-like portal protein RPIC_RS10745 715d757ce51d83683ccbb87aac108a43 205 Pfam PF04955 HupE / UreJ protein 16 200 5.8E-57 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RPIC_RS10745 715d757ce51d83683ccbb87aac108a43 205 PIRSF PIRSF016919 8 204 5.0E-51 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein RPIC_RS12495 3a41333ccf45b666e6fb4c3038c07315 113 Gene3D G3DSA:1.10.760.10 32 107 2.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS12495 3a41333ccf45b666e6fb4c3038c07315 113 SUPERFAMILY SSF46626 33 107 2.07E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 RPIC_RS12495 3a41333ccf45b666e6fb4c3038c07315 113 PRINTS PR00606 Class ID cytochrome C signature 50 63 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12495 3a41333ccf45b666e6fb4c3038c07315 113 PRINTS PR00606 Class ID cytochrome C signature 98 108 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12495 3a41333ccf45b666e6fb4c3038c07315 113 PRINTS PR00606 Class ID cytochrome C signature 86 96 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS12495 3a41333ccf45b666e6fb4c3038c07315 113 PRINTS PR00606 Class ID cytochrome C signature 35 48 1.6E-13 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 RPIC_RS13965 4a89a7db6fa26a6933a0006a009aaac8 215 PANTHER PTHR30353 1 214 3.1E-65 T 22-04-2016 IPR032818 DedA family RPIC_RS13965 4a89a7db6fa26a6933a0006a009aaac8 215 Pfam PF09335 SNARE associated Golgi protein 45 169 3.8E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein RPIC_RS13965 4a89a7db6fa26a6933a0006a009aaac8 215 PANTHER PTHR30353:SF0 1 214 3.1E-65 T 22-04-2016 RPIC_RS07190 556bbaf396c107cd80d3d985f3263aaa 444 PANTHER PTHR30482 4 372 6.2E-57 T 22-04-2016 RPIC_RS07190 556bbaf396c107cd80d3d985f3263aaa 444 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 332 3.9E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 RPIC_RS03660 f12907d200d0a842834c664f371b8942 349 PANTHER PTHR38643 38 342 3.4E-89 T 22-04-2016 RPIC_RS03660 f12907d200d0a842834c664f371b8942 349 Gene3D G3DSA:3.40.50.1580 80 239 1.2E-5 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RPIC_RS03660 f12907d200d0a842834c664f371b8942 349 Pfam PF06516 Purine nucleoside permease (NUP) 37 347 7.1E-124 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC_RS03660 f12907d200d0a842834c664f371b8942 349 PIRSF PIRSF013171 2 349 7.1E-160 T 22-04-2016 IPR009486 Purine nucleoside permease GO:0055085 RPIC_RS12045 41f033b7823216d28925b923c0d62e7c 331 Gene3D G3DSA:3.20.20.80 54 305 8.9E-10 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 RPIC_RS12045 41f033b7823216d28925b923c0d62e7c 331 SUPERFAMILY SSF51445 73 322 8.96E-19 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily RPIC_RS07795 097a32202b247df8a0f21447468158f8 301 SUPERFAMILY SSF52540 38 282 1.52E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07795 097a32202b247df8a0f21447468158f8 301 Gene3D G3DSA:3.40.50.300 39 213 2.1E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS07795 097a32202b247df8a0f21447468158f8 301 Pfam PF05621 Bacterial TniB protein 26 279 3.5E-92 T 22-04-2016 IPR008868 Bacterial TniB RPIC_RS14055 3759d025215c55f907df28bf910b6b5b 156 Pfam PF03918 Cytochrome C biogenesis protein 9 146 6.1E-47 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family RPIC_RS14055 3759d025215c55f907df28bf910b6b5b 156 PANTHER PTHR30009 27 146 3.6E-25 T 22-04-2016 RPIC_RS14055 3759d025215c55f907df28bf910b6b5b 156 PANTHER PTHR30009:SF7 27 146 3.6E-25 T 22-04-2016 RPIC_RS06520 7ecb5a5c3b87f67969ebdb783986d60e 256 Gene3D G3DSA:3.40.30.10 83 175 6.0E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06520 7ecb5a5c3b87f67969ebdb783986d60e 256 SUPERFAMILY SSF52833 41 155 5.44E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold RPIC_RS06520 7ecb5a5c3b87f67969ebdb783986d60e 256 Pfam PF05988 Bacterial protein of unknown function (DUF899) 3 252 5.5E-95 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like RPIC_RS14520 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706:SF33 3 26 3.1E-17 T 22-04-2016 RPIC_RS14520 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706:SF33 43 327 3.1E-17 T 22-04-2016 RPIC_RS14520 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706 3 26 3.1E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS14520 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706 43 327 3.1E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS14520 19e8904a79618eed8c17ee7d66c8d908 547 Pfam PF01566 Natural resistance-associated macrophage protein 71 425 2.2E-85 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS08195 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706:SF33 3 26 3.1E-17 T 22-04-2016 RPIC_RS08195 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706:SF33 43 327 3.1E-17 T 22-04-2016 RPIC_RS08195 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706 3 26 3.1E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS08195 19e8904a79618eed8c17ee7d66c8d908 547 PANTHER PTHR11706 43 327 3.1E-17 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS08195 19e8904a79618eed8c17ee7d66c8d908 547 Pfam PF01566 Natural resistance-associated macrophage protein 71 425 2.2E-85 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS01265 30e9d7d93b1f00d86b82a619a4c44009 113 Pfam PF07769 psiF repeat 41 71 1.9E-14 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RPIC_RS01265 30e9d7d93b1f00d86b82a619a4c44009 113 Pfam PF07769 psiF repeat 80 111 1.9E-11 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat RPIC_RS00665 06104de7af790d1818ba2880f0dd4b3e 107 Pfam PF08895 Domain of unknown function (DUF1840) 1 105 3.2E-27 T 22-04-2016 IPR014991 Protein of unknown function DUF1840 RPIC_RS08750 e38bc54ef15dd3f1563ab6bdd09e5204 116 Pfam PF02411 MerT mercuric transport protein 1 116 6.6E-60 T 22-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 SUPERFAMILY SSF46955 29 146 2.67E-25 T 22-04-2016 IPR009061 Putative DNA-binding domain RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 Gene3D G3DSA:1.10.1660.10 86 149 2.2E-14 T 22-04-2016 RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 Gene3D G3DSA:1.10.1660.10 28 85 1.9E-19 T 22-04-2016 RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 SMART SM00422 29 99 2.4E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 Pfam PF13411 MerR HTH family regulatory protein 29 97 1.9E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 PANTHER PTHR30204:SF1 21 146 1.3E-17 T 22-04-2016 RPIC_RS00625 215b52a49e4be645e73d816b49947bb8 165 PANTHER PTHR30204 21 146 1.3E-17 T 22-04-2016 RPIC_RS07895 bd079c216a7d2d56f3cd4855f44d95e2 240 TIGRFAM TIGR03737 PRTRC_B: PRTRC system protein B 14 237 4.4E-78 T 22-04-2016 IPR022280 ParB-related, ThiF-related cassette, protein B RPIC_RS07895 bd079c216a7d2d56f3cd4855f44d95e2 240 Pfam PF14460 Prokaryotic E2 family D 58 225 8.1E-55 T 22-04-2016 IPR032787 Prokaryotic E2 family D RPIC_RS12370 088921ce3944d81a9c96d42ab43004b5 89 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 17 84 2.0E-23 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 RPIC_RS00790 d14c06245ce8313148443903d804f2bb 284 Gene3D G3DSA:1.10.620.20 12 184 1.4E-23 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 RPIC_RS00790 d14c06245ce8313148443903d804f2bb 284 SUPERFAMILY SSF47240 5 277 1.1E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily RPIC_RS06900 219f51847ce8d69e0d77ace98700937a 351 SUPERFAMILY SSF52540 6 120 1.78E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS06900 219f51847ce8d69e0d77ace98700937a 351 Pfam PF05707 Zonular occludens toxin (Zot) 46 172 1.6E-26 T 22-04-2016 IPR008900 Zona occludens toxin RPIC_RS06900 219f51847ce8d69e0d77ace98700937a 351 Gene3D G3DSA:3.40.50.300 1 173 2.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS00730 466cbbd08e3c6c4378762eb37f28cc42 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 5.1E-36 T 22-04-2016 IPR021951 Protein of unknown function DUF3567 RPIC_RS17900 ca899909d392e0ff64e6a85d6430aeb6 404 Pfam PF05940 NnrS protein 25 398 2.8E-103 T 22-04-2016 IPR010266 NnrS RPIC_RS10910 134dc02b30bcd612088c0298974c39ba 317 SUPERFAMILY SSF56784 8 242 6.15E-12 T 22-04-2016 IPR023214 HAD-like domain RPIC_RS03640 c2d866007044a7d1ce9828846808588c 150 Pfam PF09980 Predicted membrane protein (DUF2214) 4 149 1.7E-56 T 22-04-2016 IPR018706 Protein of unknown function DUF2214, membrane RPIC_RS03780 7fbecdc3bcfb71053fd6dfc8a5717f55 186 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 116 169 4.3E-12 T 22-04-2016 IPR018637 Domain of unknown function DUF2059 RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 Pfam PF13614 AAA domain 6 206 1.9E-20 T 22-04-2016 IPR025669 AAA domain RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 PANTHER PTHR13696 6 64 3.0E-12 T 22-04-2016 RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 PANTHER PTHR13696 83 206 3.0E-12 T 22-04-2016 RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 PANTHER PTHR13696:SF52 6 64 3.0E-12 T 22-04-2016 RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 PANTHER PTHR13696:SF52 83 206 3.0E-12 T 22-04-2016 RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 SUPERFAMILY SSF52540 4 69 1.95E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 SUPERFAMILY SSF52540 101 225 1.95E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS02145 3c4102af35990405e0ecfa9494b5f929 340 Gene3D G3DSA:3.40.50.300 4 221 5.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 Pfam PF01202 Shikimate kinase 1 157 2.5E-52 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 ProSitePatterns PS01128 Shikimate kinase signature. 48 73 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 Gene3D G3DSA:3.40.50.300 1 161 4.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 25.061 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 PRINTS PR01100 Shikimate kinase family signature 47 55 6.0E-12 T 22-04-2016 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 PRINTS PR01100 Shikimate kinase family signature 86 103 6.0E-12 T 22-04-2016 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 PRINTS PR01100 Shikimate kinase family signature 65 74 6.0E-12 T 22-04-2016 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 PRINTS PR01100 Shikimate kinase family signature 19 32 6.0E-12 T 22-04-2016 RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 SUPERFAMILY SSF52540 1 156 6.91E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase RPIC_RS16035 1f511ad4b5dee54de0b790b07a42be3f 179 PANTHER PTHR21087 1 154 1.6E-53 T 22-04-2016 RPIC_RS07075 b67843a48ef9bc4cd98ce174345c8dc0 271 PANTHER PTHR17985 2 249 3.9E-72 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 RPIC_RS07075 b67843a48ef9bc4cd98ce174345c8dc0 271 PANTHER PTHR17985:SF8 2 249 3.9E-72 T 22-04-2016 RPIC_RS07075 b67843a48ef9bc4cd98ce174345c8dc0 271 Pfam PF05742 Transport and Golgi organisation 2 1 249 2.8E-68 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 RPIC_RS07515 f503a5af5c4e20eee1d0e31c2b2e928a 420 Pfam PF07514 Putative helicase 21 221 2.4E-11 T 22-04-2016 IPR011119 Uncharacterised domain, helicase/relaxase, putative RPIC_RS11145 e31bb81f9e48c01f9c26ade58a03508c 222 Pfam PF13590 Domain of unknown function (DUF4136) 48 193 9.3E-18 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 Pfam PF03922 OmpW family 64 274 9.0E-20 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 PANTHER PTHR36920:SF1 1 49 7.5E-22 T 22-04-2016 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 PANTHER PTHR36920:SF1 65 178 7.5E-22 T 22-04-2016 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 PANTHER PTHR36920:SF1 197 274 7.5E-22 T 22-04-2016 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 PANTHER PTHR36920 1 49 7.5E-22 T 22-04-2016 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 PANTHER PTHR36920 65 178 7.5E-22 T 22-04-2016 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 PANTHER PTHR36920 197 274 7.5E-22 T 22-04-2016 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 SUPERFAMILY SSF56925 201 274 1.83E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 SUPERFAMILY SSF56925 131 174 1.83E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 SUPERFAMILY SSF56925 57 103 1.83E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS11910 52c0af6943ddfe4345e7b9bd0b1e2908 274 Gene3D G3DSA:2.40.160.20 20 274 2.8E-60 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 RPIC_RS02935 ee5fc83a81002f45c5ca75efb9d8749e 442 Pfam PF09594 Protein of unknown function (DUF2029) 105 332 6.8E-39 T 22-04-2016 IPR018584 Glycosyltransferase family 87 GO:0016758 RPIC_RS17085 f4c95c68bb07ed70129340f46e1efd3d 224 ProDom PD047574 TYPE I RESTRICTION HYDROLASE DEOXYRIBONUCLEASE SITE-SPECIFIC HSDR ENZYME SYSTEM ENDONUCLEASE 23 58 3.0E-11 T 22-04-2016 RPIC_RS17085 f4c95c68bb07ed70129340f46e1efd3d 224 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 16 217 6.9E-52 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal RPIC_RS14360 2287eca37f94f62a262dd9add4ff3793 198 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 17 161 9.9E-15 T 22-04-2016 IPR013362 Pilus modification type IV, PilV RPIC_RS02930 5eeed615de183407e8697b303fa3a9ff 366 PANTHER PTHR23028 6 335 1.5E-24 T 22-04-2016 RPIC_RS02930 5eeed615de183407e8697b303fa3a9ff 366 Pfam PF01757 Acyltransferase family 4 313 4.5E-20 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 RPIC_RS02150 33b4ef1172f37a8c7ee4855f35262406 319 Gene3D G3DSA:3.40.1350.10 173 271 9.7E-7 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 RPIC_RS02150 33b4ef1172f37a8c7ee4855f35262406 319 Pfam PF04471 Restriction endonuclease 175 289 1.3E-5 T 22-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 RPIC_RS02150 33b4ef1172f37a8c7ee4855f35262406 319 SUPERFAMILY SSF52980 174 286 1.61E-10 T 22-04-2016 IPR011335 Restriction endonuclease type II-like RPIC_RS01510 ae7c39a6a85c4bb3e143567cade44700 86 Gene3D G3DSA:1.10.1200.10 2 84 1.9E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS01510 ae7c39a6a85c4bb3e143567cade44700 86 Pfam PF00550 Phosphopantetheine attachment site 8 79 1.6E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS01510 ae7c39a6a85c4bb3e143567cade44700 86 SUPERFAMILY SSF47336 1 83 1.57E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain RPIC_RS05515 0e626f522a233aa862095b49bdae7830 75 Pfam PF05751 FixH 15 66 5.7E-8 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH RPIC_RS08450 b087f210afdc0ee7621c5967f35e55d6 309 PANTHER PTHR34820 1 307 2.3E-26 T 22-04-2016 RPIC_RS08450 b087f210afdc0ee7621c5967f35e55d6 309 Pfam PF05425 Copper resistance protein D 198 301 2.2E-27 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 RPIC_RS07820 2f56713963c20526969d3a2122f34e8a 92 PANTHER PTHR33677 1 92 1.2E-22 T 22-04-2016 RPIC_RS07820 2f56713963c20526969d3a2122f34e8a 92 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 8.8E-22 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RPIC_RS19590 862c0b19793ce07b8fd44e7b4c333ed7 165 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 16 165 4.5E-43 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC_RS19590 862c0b19793ce07b8fd44e7b4c333ed7 165 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 4 164 4.3E-51 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC_RS09195 1284259bc0058665a284f187d473ed19 142 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 28 123 6.0E-33 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 RPIC_RS09195 1284259bc0058665a284f187d473ed19 142 PANTHER PTHR36835 16 126 2.2E-30 T 22-04-2016 RPIC_RS09195 1284259bc0058665a284f187d473ed19 142 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 34 107 5.2E-18 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RPIC_RS07855 8e92fff8349642f6ace37672887299b4 141 SUPERFAMILY SSF52402 3 79 1.84E-7 T 22-04-2016 RPIC_RS07855 8e92fff8349642f6ace37672887299b4 141 Gene3D G3DSA:3.40.50.620 3 79 5.2E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RPIC_RS07855 8e92fff8349642f6ace37672887299b4 141 Pfam PF00582 Universal stress protein family 3 73 3.5E-5 T 22-04-2016 IPR006016 UspA GO:0006950 RPIC_RS13440 05444f6bf2ab65cb69d2a6e70a0c5dc9 125 Pfam PF13788 Domain of unknown function (DUF4180) 8 116 2.9E-39 T 22-04-2016 IPR025438 Domain of unknown function DUF4180 RPIC_RS10755 0fafc59ace010a74360993e2b72cf747 295 PANTHER PTHR33643:SF1 18 292 9.1E-37 T 22-04-2016 RPIC_RS10755 0fafc59ace010a74360993e2b72cf747 295 Pfam PF01774 UreD urease accessory protein 61 268 1.8E-44 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RPIC_RS10755 0fafc59ace010a74360993e2b72cf747 295 PANTHER PTHR33643 18 292 9.1E-37 T 22-04-2016 RPIC_RS10755 0fafc59ace010a74360993e2b72cf747 295 Hamap MF_01384 Urease accessory protein UreD [ureD]. 18 279 28.306 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RPIC_RS02850 597ee901858e7a26459e96ac3d830c7c 320 Pfam PF00482 Type II secretion system (T2SS), protein F 172 300 2.3E-20 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS02850 597ee901858e7a26459e96ac3d830c7c 320 PANTHER PTHR35007:SF2 1 311 7.6E-63 T 22-04-2016 RPIC_RS02850 597ee901858e7a26459e96ac3d830c7c 320 PANTHER PTHR35007 1 311 7.6E-63 T 22-04-2016 RPIC_RS03255 b486e76ed4039baee744c921ea989c98 134 Gene3D G3DSA:3.30.700.10 8 65 3.3E-4 T 22-04-2016 RPIC_RS03255 b486e76ed4039baee744c921ea989c98 134 SUPERFAMILY SSF54523 8 117 3.22E-13 T 22-04-2016 RPIC_RS03255 b486e76ed4039baee744c921ea989c98 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 1.6E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site RPIC_RS10165 133804b06f76e962eedfa0704c34f361 653 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 4 596 7.9E-118 T 22-04-2016 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY RPIC_RS11430 ad7593ae02d97bd05e3e348f34e941b5 141 SUPERFAMILY SSF103370 5 137 2.35E-24 T 22-04-2016 IPR008711 Recombinase NinB RPIC_RS11430 ad7593ae02d97bd05e3e348f34e941b5 141 Pfam PF05772 NinB protein 6 135 4.7E-12 T 22-04-2016 IPR008711 Recombinase NinB RPIC_RS11430 ad7593ae02d97bd05e3e348f34e941b5 141 ProDom PD033929 YBCN ECS1616 SIMILAR 5'REGION ORF151 RUSA LAMBDOID DLP12 BACTERIOPHAGE PROPHAGE 23 129 0.005 T 22-04-2016 RPIC_RS11430 ad7593ae02d97bd05e3e348f34e941b5 141 Gene3D G3DSA:1.10.3790.10 5 137 2.0E-33 T 22-04-2016 IPR008711 Recombinase NinB RPIC_RS12480 642275559b6413733f241f010ee0f13a 115 Pfam PF13467 Ribbon-helix-helix domain 16 83 5.6E-24 T 22-04-2016 IPR027373 Ribbon-helix-helix domain RPIC_RS18085 b15ab9cbfe2d177c6928b173f582ad63 805 Pfam PF11678 Protein of unknown function (DUF3274) 673 730 3.4E-5 T 22-04-2016 IPR021692 Protein of unknown function DUF3274 RPIC_RS09820 2048a76dd145fca1ea353713c409cffc 130 Pfam PF09842 Predicted membrane protein (DUF2069) 19 118 8.8E-35 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane RPIC_RS08385 d07e1193f34e0611e9b5d2e4fba24b2e 221 Pfam PF04191 Phospholipid methyltransferase 128 194 2.5E-10 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 RPIC_RS08385 d07e1193f34e0611e9b5d2e4fba24b2e 221 PANTHER PTHR12714 8 213 9.0E-21 T 22-04-2016 RPIC_RS12525 4fa768a4dc2064e6cf054d50af890fd3 80 SUPERFAMILY SSF57987 36 78 9.46E-7 T 22-04-2016 RPIC_RS12525 4fa768a4dc2064e6cf054d50af890fd3 80 Gene3D G3DSA:1.20.5.230 35 77 1.6E-7 T 22-04-2016 RPIC_RS12525 4fa768a4dc2064e6cf054d50af890fd3 80 Pfam PF10389 Bacteriophage coat protein B 34 79 1.7E-21 T 22-04-2016 IPR008020 Capsid protein G8P GO:0019028 RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 PANTHER PTHR10587 193 453 1.4E-118 T 22-04-2016 RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 PANTHER PTHR10587 502 763 1.4E-118 T 22-04-2016 RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 PANTHER PTHR10587:SF63 502 763 1.4E-118 T 22-04-2016 RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 SUPERFAMILY SSF53448 279 566 3.94E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 Pfam PF00535 Glycosyl transferase family 2 281 463 8.2E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 PANTHER PTHR10587:SF63 193 453 1.4E-118 T 22-04-2016 RPIC_RS15570 c584153ad39d1a845c5cf741793e88e3 862 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 119 780 51.114 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 RPIC_RS05530 13fff33a6b48bea5c534907f16d047a6 247 PANTHER PTHR42208 1 232 9.7E-23 T 22-04-2016 RPIC_RS05530 13fff33a6b48bea5c534907f16d047a6 247 PANTHER PTHR42208:SF1 1 232 9.7E-23 T 22-04-2016 RPIC_RS05530 13fff33a6b48bea5c534907f16d047a6 247 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 226 9.5E-49 T 22-04-2016 RPIC_RS13320 9e880fcd097d1c7bd3db029640e4d1e6 158 PANTHER PTHR13355 25 146 1.9E-15 T 22-04-2016 RPIC_RS13320 9e880fcd097d1c7bd3db029640e4d1e6 158 PANTHER PTHR13355:SF5 25 146 1.9E-15 T 22-04-2016 RPIC_RS13320 9e880fcd097d1c7bd3db029640e4d1e6 158 SUPERFAMILY SSF55729 30 142 3.49E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS13320 9e880fcd097d1c7bd3db029640e4d1e6 158 Gene3D G3DSA:3.40.630.30 23 141 3.5E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase RPIC_RS13320 9e880fcd097d1c7bd3db029640e4d1e6 158 Pfam PF13673 Acetyltransferase (GNAT) domain 68 138 4.4E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 RPIC_RS12470 53cb204155a12338c592da8c37e7e07f 137 Pfam PF08886 Glutamate-cysteine ligase 15 123 7.8E-36 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA RPIC_RS18295 0effa292a3d738aade5e7ea62030fdff 170 PIRSF PIRSF018472 4 164 4.0E-41 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type RPIC_RS18295 0effa292a3d738aade5e7ea62030fdff 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 5.8E-29 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RPIC_RS18295 0effa292a3d738aade5e7ea62030fdff 170 Pfam PF04093 rod shape-determining protein MreD 11 154 6.0E-16 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RPIC_RS18295 0effa292a3d738aade5e7ea62030fdff 170 PANTHER PTHR37484 5 164 1.3E-20 T 22-04-2016 RPIC_RS02295 47586852eab24bad2aafe07354a58339 104 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 12 83 9.2E-23 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted RPIC_RS02295 47586852eab24bad2aafe07354a58339 104 Pfam PF13937 Domain of unknown function (DUF4212) 12 79 1.0E-17 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted RPIC_RS17980 1e97bd6d7087d6dba497ec146658c5df 129 Pfam PF16998 17 kDa outer membrane surface antigen 47 128 2.2E-6 T 22-04-2016 IPR032635 Surface antigen domain RPIC_RS00995 45a955049e9c27beed5fb22feb66bca4 91 PANTHER PTHR37424:SF1 2 83 3.0E-13 T 22-04-2016 RPIC_RS00995 45a955049e9c27beed5fb22feb66bca4 91 PANTHER PTHR37424 2 83 3.0E-13 T 22-04-2016 RPIC_RS00995 45a955049e9c27beed5fb22feb66bca4 91 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 2.4E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain RPIC_RS24925 d20cbe433ba02f133488b1b202e55794 276 Pfam PF04404 ERF superfamily 74 219 2.4E-25 T 22-04-2016 IPR007499 Essential recombination function protein RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 37 58 2.0E-33 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 111 136 2.0E-33 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 68 90 2.0E-33 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 182 201 2.0E-33 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 2.0E-33 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 145 169 2.0E-33 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 PANTHER PTHR30413 7 263 4.3E-12 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RPIC_RS05715 ca6d95a7e1f4070b5362f8807a35d0cd 263 Pfam PF01061 ABC-2 type transporter 18 225 6.7E-18 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 RPIC_RS08880 e295b3559097e4f2e4980b66a34ee4dd 112 Pfam PF11604 Copper binding periplasmic protein CusF 46 110 1.2E-22 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF RPIC_RS00675 d33b8cd89711894e6708bcbb50f0dcb6 142 Pfam PF05957 Bacterial protein of unknown function (DUF883) 43 130 2.1E-14 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB RPIC_RS13065 a881ebe05af0b8aa771f412d2018da34 423 Pfam PF03743 Bacterial conjugation TrbI-like protein 229 409 1.8E-57 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RPIC_RS03170 091566e0bbcce9530194569e07b468c1 197 Pfam PF07273 Protein of unknown function (DUF1439) 46 183 1.0E-18 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 RPIC_RS12860 63302a8f3eae51319707f6540ebb0b68 274 Pfam PF06067 Domain of unknown function (DUF932) 36 263 3.0E-59 T 22-04-2016 IPR026325 Protein of unknown function DUF932 RPIC_RS12755 8055a84f9057d44bb34d48d8765f2414 186 Pfam PF11748 Protein of unknown function (DUF3306) 6 112 4.5E-36 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 RPIC_RS04385 c196f59c3efa3c61c9810f9c6fabc736 247 Pfam PF05433 Glycine zipper 2TM domain 160 198 1.2E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 RPIC_RS04385 c196f59c3efa3c61c9810f9c6fabc736 247 PANTHER PTHR35603 91 239 5.0E-14 T 22-04-2016 RPIC_RS04465 ca05bff846b80520fd1f17eb9d88f5e1 133 SUPERFAMILY SSF50022 7 114 5.63E-21 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS04465 ca05bff846b80520fd1f17eb9d88f5e1 133 Pfam PF00355 Rieske [2Fe-2S] domain 36 97 2.2E-6 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS04465 ca05bff846b80520fd1f17eb9d88f5e1 133 PANTHER PTHR40261:SF2 37 119 7.9E-22 T 22-04-2016 RPIC_RS04465 ca05bff846b80520fd1f17eb9d88f5e1 133 Gene3D G3DSA:2.102.10.10 5 117 7.8E-17 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RPIC_RS04465 ca05bff846b80520fd1f17eb9d88f5e1 133 PANTHER PTHR40261 37 119 7.9E-22 T 22-04-2016 RPIC_RS12840 c3022d8cccf034d36d630017716d7653 356 SUPERFAMILY SSF56281 215 280 2.8E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12840 c3022d8cccf034d36d630017716d7653 356 SUPERFAMILY SSF56281 4 158 2.8E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12840 c3022d8cccf034d36d630017716d7653 356 Gene3D G3DSA:3.60.15.10 221 278 4.5E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS12840 c3022d8cccf034d36d630017716d7653 356 Gene3D G3DSA:3.60.15.10 25 173 4.5E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase RPIC_RS03750 60b93afba4e16419afddc900d35e8ef9 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 182 329 2.2E-23 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC_RS03750 60b93afba4e16419afddc900d35e8ef9 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 870 1016 4.6E-39 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC_RS03750 60b93afba4e16419afddc900d35e8ef9 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 400 544 1.9E-20 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC_RS03750 60b93afba4e16419afddc900d35e8ef9 1260 Pfam PF05359 Domain of Unknown Function (DUF748) 617 768 7.1E-35 T 22-04-2016 IPR008023 Protein of unknown function DUF748 RPIC_RS03750 60b93afba4e16419afddc900d35e8ef9 1260 Gene3D G3DSA:3.30.1330.60 1085 1127 2.4E-6 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS03750 60b93afba4e16419afddc900d35e8ef9 1260 Gene3D G3DSA:3.30.1330.60 1206 1237 2.4E-6 T 22-04-2016 IPR006665 OmpA-like domain RPIC_RS02210 fa56bc83fdffd60a584ccf973572595d 457 Pfam PF03432 Relaxase/Mobilisation nuclease domain 63 130 9.3E-6 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 RPIC_RS06250 4ddb0a5b1ec2d2a293ab4b8e3813f427 119 Gene3D G3DSA:2.170.140.10 72 115 8.3E-5 T 22-04-2016 IPR002557 Chitin binding domain GO:0005576|GO:0006030|GO:0008061 RPIC_RS06250 4ddb0a5b1ec2d2a293ab4b8e3813f427 119 SUPERFAMILY SSF57625 76 112 1.18E-5 T 22-04-2016 IPR002557 Chitin binding domain GO:0005576|GO:0006030|GO:0008061 RPIC_RS08615 5f4f9c7b073d40328f06439c256c6007 355 Pfam PF13609 Gram-negative porin 7 319 1.1E-52 T 22-04-2016 RPIC_RS08615 5f4f9c7b073d40328f06439c256c6007 355 PRINTS PR00184 Neisseria sp. porin signature 58 83 1.2E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS08615 5f4f9c7b073d40328f06439c256c6007 355 PRINTS PR00184 Neisseria sp. porin signature 291 315 1.2E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 RPIC_RS08615 5f4f9c7b073d40328f06439c256c6007 355 SUPERFAMILY SSF56935 21 355 4.12E-87 T 22-04-2016 RPIC_RS08615 5f4f9c7b073d40328f06439c256c6007 355 Gene3D G3DSA:2.40.160.10 21 355 5.7E-96 T 22-04-2016 IPR023614 Porin domain RPIC_RS13035 9ef21c7c00b1e25108ac37bd064503e5 94 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 19 90 1.0E-4 T 22-04-2016 RPIC_RS13035 9ef21c7c00b1e25108ac37bd064503e5 94 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 16 89 5.2E-11 T 22-04-2016 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB RPIC_RS13035 9ef21c7c00b1e25108ac37bd064503e5 94 PIRSF PIRSF017854 10 94 4.8E-35 T 22-04-2016 IPR016704 Conjugal transfer, TrbD RPIC_RS09865 b0786b447ca3621a639440addd5108aa 130 Gene3D G3DSA:3.40.50.920 4 34 5.3E-6 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RPIC_RS07840 6459dd732d990a7a6c9423e0653ea9af 547 PANTHER PTHR11706 47 327 2.4E-15 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS07840 6459dd732d990a7a6c9423e0653ea9af 547 PANTHER PTHR11706:SF33 47 327 2.4E-15 T 22-04-2016 RPIC_RS07840 6459dd732d990a7a6c9423e0653ea9af 547 Pfam PF01566 Natural resistance-associated macrophage protein 71 425 5.3E-86 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 RPIC_RS21510 02f10fe785bccd09aef63ac9fda3e9fa 69 SUPERFAMILY SSF50341 1 66 2.49E-5 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 RPIC_RS13740 84d6c0c10fc776f1f7fb1fd463566ded 466 PANTHER PTHR30354:SF7 1 466 9.5E-234 T 22-04-2016 RPIC_RS13740 84d6c0c10fc776f1f7fb1fd463566ded 466 PANTHER PTHR30354 1 466 9.5E-234 T 22-04-2016 RPIC_RS00955 08aa5c8599223e791ac2c26692b191e4 271 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 15 270 4.8E-78 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC_RS00955 08aa5c8599223e791ac2c26692b191e4 271 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 39 270 3.9E-68 T 22-04-2016 IPR010239 Conserved hypothetical protein CHP02001 RPIC_RS07605 0e8bb6a7c2c4b3045009b7da241bdf25 357 Pfam PF00482 Type II secretion system (T2SS), protein F 27 139 1.6E-8 T 22-04-2016 IPR018076 Type II secretion system F domain RPIC_RS16520 f43d9964a286e1b960dfa7b38ac3356f 208 Pfam PF07209 Protein of unknown function (DUF1415) 30 195 6.6E-63 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 RPIC_RS11915 5d314f28cc71a22a4bde9c7fcebe6bd4 419 Pfam PF11170 Protein of unknown function (DUF2957) 65 416 9.8E-146 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 RPIC_RS12845 144478792ad1c8ecff9d860dd35b8121 116 Pfam PF11171 Protein of unknown function (DUF2958) 6 115 1.2E-48 T 22-04-2016 IPR021341 Protein of unknown function DUF2958 RPIC_RS01450 8b77b4699ec8a3b6120900f82bb4bd3f 109 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 5 77 1.1E-23 T 22-04-2016 IPR014299 Pentapeptide MXKDX repeat protein RPIC_RS01450 8b77b4699ec8a3b6120900f82bb4bd3f 109 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 55 107 1.5E-18 T 22-04-2016 IPR014299 Pentapeptide MXKDX repeat protein RPIC_RS05770 50cbae9cf87a5b0266489859d87474d7 671 Pfam PF05159 Capsule polysaccharide biosynthesis protein 456 601 4.0E-24 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 RPIC_RS05770 50cbae9cf87a5b0266489859d87474d7 671 Pfam PF05159 Capsule polysaccharide biosynthesis protein 153 280 5.5E-10 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 RPIC_RS01905 dbd276f13441f8f2910a17963036ca7d 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 3.2E-25 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD RPIC_RS13985 12c3c761b443e78ed1ecd26698a65fec 246 Pfam PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA 74 245 2.5E-91 T 22-04-2016 IPR018655 Protein of unknown function DUF2086 RPIC_RS15740 6b31826edf7ee55a04528c74b395968d 343 SUPERFAMILY SSF88723 1 53 4.77E-5 T 22-04-2016 IPR029060 PIN domain-like RPIC_RS02320 fcc2ebc19c689f5aaf9b88758785f77b 208 Pfam PF11136 Protein of unknown function (DUF2889) 13 137 2.7E-45 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 RPIC_RS02025 05ae44bd0e8681d61f5a36448e83eb1a 305 Pfam PF07608 Protein of unknown function (DUF1571) 104 305 9.5E-48 T 22-04-2016 IPR011465 Protein of unknown function DUF1571 RPIC_RS00740 6457abae967155f728f25760a74aca9e 378 Pfam PF11306 Protein of unknown function (DUF3108) 133 365 4.7E-26 T 22-04-2016 IPR021457 Protein of unknown function DUF3108 RPIC_RS12880 41bd9ea5f21e49b4fa91e80a33ecd5be 104 Pfam PF05284 Protein of unknown function (DUF736) 3 98 6.2E-35 T 22-04-2016 IPR007948 Protein of unknown function DUF736 RPIC_RS08185 19bfd00b784aa04c984935fd446f0692 482 Pfam PF04966 Carbohydrate-selective porin, OprB family 97 482 3.8E-48 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC_RS14530 19bfd00b784aa04c984935fd446f0692 482 Pfam PF04966 Carbohydrate-selective porin, OprB family 97 482 3.8E-48 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC_RS18565 2af83f192b3ebcee1105648ae989a328 297 Pfam PF01734 Patatin-like phospholipase 9 213 2.9E-23 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 RPIC_RS18565 2af83f192b3ebcee1105648ae989a328 297 SUPERFAMILY SSF52151 165 260 1.41E-24 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS18565 2af83f192b3ebcee1105648ae989a328 297 SUPERFAMILY SSF52151 10 130 1.41E-24 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RPIC_RS18750 cb362ca6060f149c90d4725fda66b228 427 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 7 47 0.44 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RPIC_RS18750 cb362ca6060f149c90d4725fda66b228 427 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 366 395 0.015 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RPIC_RS18750 cb362ca6060f149c90d4725fda66b228 427 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 145 163 0.65 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RPIC_RS18750 cb362ca6060f149c90d4725fda66b228 427 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 91 109 0.074 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat RPIC_RS02370 3688410e2e7471c5a5ccc30fe5342f2b 193 Pfam PF11161 Protein of unknown function (DUF2946) 1 192 8.9E-72 T 22-04-2016 IPR021332 Protein of unknown function DUF2944 RPIC_RS08010 0329de96c47130a5e2882a1436b51f3a 127 Pfam PF04519 Polymer-forming cytoskeletal 8 104 3.7E-15 T 22-04-2016 IPR007607 Protein of unknown function DUF583 RPIC_RS10005 a88eb5deda2f175d7ea022748f6c5bcd 155 Pfam PF13664 Domain of unknown function (DUF4149) 8 107 2.6E-22 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 RPIC_RS01910 0099ff0f3c71f1afb54779238a53ee4d 242 Pfam PF03591 AzlC protein 18 163 1.9E-41 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease RPIC_RS01910 0099ff0f3c71f1afb54779238a53ee4d 242 PANTHER PTHR34979 1 240 1.2E-38 T 22-04-2016 RPIC_RS05640 055592c61dfb6c11c40d7f4fd97a4f77 173 Pfam PF03245 Bacteriophage Rz lysis protein 43 163 3.1E-16 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 RPIC_RS24175 3a30042ceda2880ea7cce3055dabd219 163 SUPERFAMILY SSF53756 2 136 9.42E-14 T 22-04-2016 RPIC_RS07560 806293d9ce7ec82f1eaede79d5903814 403 Pfam PF03743 Bacterial conjugation TrbI-like protein 218 398 1.3E-47 T 22-04-2016 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI RPIC_RS07580 0595ca2ab35c31634933f1087d7a01cf 174 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 91 168 6.3E-21 T 22-04-2016 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal RPIC_RS13560 09ecb8aca105c757cf47584191f0faa3 204 Pfam PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase 67 176 1.5E-8 T 22-04-2016 IPR024651 FAD-containing D-sorbitol dehydrogenase small subunit RPIC_RS09000 260a00e1dfa0292f0d5cb226d5696351 162 Pfam PF04214 Protein of unknown function, DUF 64 132 4.4E-30 T 22-04-2016 IPR007332 Protein of unknown function DUF411 RPIC_RS11030 5a9047445cf45c75ca6f1062f6e5306f 844 PANTHER PTHR30287 1 844 1.4E-124 T 22-04-2016 RPIC_RS11030 5a9047445cf45c75ca6f1062f6e5306f 844 Pfam PF02687 FtsX-like permease family 723 835 1.2E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC_RS11030 5a9047445cf45c75ca6f1062f6e5306f 844 Pfam PF02687 FtsX-like permease family 274 379 2.7E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 RPIC_RS01085 8af057ae7786339378592d72476e9b98 69 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 1.9E-24 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 RPIC_RS12490 27b96274020cde43f917e2d49751f43a 202 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 23 55 5.1E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RPIC_RS08710 47f25e5f6f9aa96c14fa3d4c19fd5bc4 309 PANTHER PTHR34820 1 307 9.6E-26 T 22-04-2016 RPIC_RS08710 47f25e5f6f9aa96c14fa3d4c19fd5bc4 309 Pfam PF05425 Copper resistance protein D 198 301 3.5E-27 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 RPIC_RS08360 27013e8f66e759a11077d1e4bb0be91f 201 Pfam PF09335 SNARE associated Golgi protein 40 160 4.1E-9 T 22-04-2016 IPR032816 SNARE associated Golgi protein RPIC_RS15705 90503e8aa4522b79ef628494759dbf5e 241 Pfam PF16473 3' exoribonuclease, RNase T-like 95 239 8.1E-8 T 22-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain RPIC_RS07365 95c21d64cfcc74a8874fe1d191bd9ab8 149 Pfam PF04138 GtrA-like protein 9 121 3.4E-16 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RPIC_RS07365 95c21d64cfcc74a8874fe1d191bd9ab8 149 Pfam PF04138 GtrA-like protein 71 128 2.7E-7 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RPIC_RS04235 a9fca94cc2b4ad8f1417144ad8241a07 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 6.1E-7 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like RPIC_RS15625 c50d046a0d601032a3ae33ccd1492d67 482 Pfam PF04966 Carbohydrate-selective porin, OprB family 96 482 2.7E-48 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 RPIC_RS16735 e391e6a67197136027ae5b1a4ff4aa57 264 Pfam PF08874 Domain of unknown function (DUF1835) 4 119 2.7E-27 T 22-04-2016 IPR014973 Protein of unknown function DUF1835 RPIC_RS16735 e391e6a67197136027ae5b1a4ff4aa57 264 Pfam PF12395 Protein of unknown function 150 254 1.6E-28 T 22-04-2016 IPR022123 Protein of unknown function DUF3658 RPIC_RS07880 d48c767289932ac9b9fa5d407647788e 161 TIGRFAM TIGR03741 PRTRC_E: PRTRC system protein E 1 100 2.4E-29 T 22-04-2016 IPR022273 ParB-related, ThiF-related cassette, protein E RPIC_RS17585 7fe117bafec65bc0cf08c50e879cdefb 254 PANTHER PTHR31885 70 252 3.6E-22 T 22-04-2016 RPIC_RS17585 7fe117bafec65bc0cf08c50e879cdefb 254 Pfam PF07947 YhhN-like protein 64 240 3.6E-44 T 22-04-2016 IPR012506 YhhN-like GO:0016021 RPIC_RS14345 cb01d0a0ee944e878e02d2744be0ecf6 1078 Pfam PF05567 Neisseria PilC beta-propeller domain 591 833 1.0E-13 T 22-04-2016 IPR008707 PilC beta-propeller domain RPIC_RS04360 32cb44588057e88704e2475910585963 66 Pfam PF12088 Protein of unknown function (DUF3565) 6 62 2.5E-30 T 22-04-2016 IPR021948 Protein of unknown function DUF3565 RPIC_RS15575 55552a49bf60b01b91f9298ade6b5016 107 Pfam PF12778 PXPV repeat (3 copies) 47 65 0.005 T 22-04-2016 IPR024446 PXPV repeat RPIC_RS15575 55552a49bf60b01b91f9298ade6b5016 107 Pfam PF12778 PXPV repeat (3 copies) 32 52 1.2E-4 T 22-04-2016 IPR024446 PXPV repeat RPIC_RS10425 f04b0ea82fdef06b2daef29285921a02 93 Gene3D G3DSA:2.10.70.10 55 93 1.3E-19 T 22-04-2016 RPIC_RS10425 f04b0ea82fdef06b2daef29285921a02 93 Pfam PF10636 Hemin uptake protein hemP 58 93 2.0E-17 T 22-04-2016 IPR019600 Hemin uptake protein HemP RPIC_RS02905 9b4c06d704a167c69ec6063c080f91b9 55 Pfam PF04964 Flp/Fap pilin component 10 55 8.0E-21 T 22-04-2016 IPR007047 Flp/Fap pilin component RPIC_RS00870 8e21b425645dcdb278f58e4670d3fd90 119 Pfam PF11142 Protein of unknown function (DUF2917) 10 71 1.9E-17 T 22-04-2016 IPR021317 Protein of unknown function DUF2917 RPIC_RS06525 6f2c881c9da16e320910292483cf8e99 257 Pfam PF09948 Predicted metal-binding integral membrane protein (DUF2182) 70 249 6.3E-47 T 22-04-2016 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding RPIC_RS13540 a165f8bfbeea980368bcbdd595f7ded8 67 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 11 59 2.8E-20 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) RPIC_RS04260 7e6eba921d3175652cbe35dc6c190d38 144 Pfam PF08897 Domain of unknown function (DUF1841) 5 139 3.3E-63 T 22-04-2016 IPR014993 Protein of unknown function DUF1841 RPIC_RS13050 7cbf58903d1154bf84a85179e61dd626 450 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 256 2.5E-50 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 RPIC_RS13050 7cbf58903d1154bf84a85179e61dd626 450 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 2 305 1.9E-65 T 22-04-2016 IPR014150 Conjugal transfer, TrbL RPIC_RS17730 a21715d3ab4fa3b96dd1c7c5b1dd31a9 152 Pfam PF07007 Protein of unknown function (DUF1311) 57 147 6.6E-16 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 RPIC_RS16075 5e9ad8b2f90d08e5a66e5c244bc4b692 77 Pfam PF13627 Prokaryotic lipoprotein-attachment site 10 32 6.2E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site RPIC_RS03260 6a035d98052888511c8d99d1e240e808 263 Pfam PF13681 Type IV pilus assembly protein PilX C-term 109 200 7.8E-17 T 22-04-2016 IPR025205 PilX/PilW C-terminal domain RPIC_RS11570 03930c096190242a6ae77a0b37bc37f5 202 Pfam PF07603 Protein of unknown function (DUF1566) 80 198 6.9E-9 T 22-04-2016 IPR011460 Protein of unknown function DUF1566 RPIC_RS08625 0509b609eb00a27eeca7198df36d3c98 131 Pfam PF16986 Heavy-metal resistance protein CzcE 50 128 2.4E-32 T 22-04-2016 IPR031560 Heavy-metal resistance protein CzcE RPIC_RS12895 f36d5657f90bf2983afa1e8bddd5e561 249 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 129 233 7.4E-31 T 22-04-2016 IPR018754 Protein of unknown function DUF2285 RPIC_RS14955 f65badf021ce611a4f197d24ada21a98 155 PANTHER PTHR35603 1 153 4.9E-18 T 22-04-2016 RPIC_RS00160 300cb2d53d5b9ebea6fbb7087e70fa18 97 Pfam PF08734 GYD domain 4 92 8.1E-32 T 22-04-2016 IPR014845 Uncharacterised protein GYD RPIC_RS12350 644778b4c03b577f71d572a45aa47852 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 74 124 1.3E-11 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12350 644778b4c03b577f71d572a45aa47852 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 242 2.7E-12 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12350 644778b4c03b577f71d572a45aa47852 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 20 70 4.1E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12350 644778b4c03b577f71d572a45aa47852 257 Pfam PF03988 Repeat of Unknown Function (DUF347) 139 184 1.3E-9 T 22-04-2016 IPR007136 Protein of unknown function DUF347 RPIC_RS12930 942f1e143369a8dfcbeb61f4387717ca 660 Pfam PF11843 Protein of unknown function (DUF3363) 286 657 3.5E-139 T 22-04-2016 IPR021795 Protein of unknown function DUF3363 RPIC_RS15430 fd57c82e07471350b62f46143cf4f539 143 Pfam PF07007 Protein of unknown function (DUF1311) 25 126 5.2E-9 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 RPIC_RS09015 92193eaf546a584b18fa95299d26945f 429 Pfam PF05275 Copper resistance protein B precursor (CopB) 223 429 6.8E-88 T 22-04-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 RPIC_RS12685 f06acd579d60a70050057fc6a9451798 239 Pfam PF10099 Anti-sigma-K factor rskA 71 232 2.6E-26 T 22-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 RPIC_RS18245 4bd65750b4a2e1e435e4b41f35cd9ab3 674 PANTHER PTHR33908 183 551 4.4E-15 T 22-04-2016 RPIC_RS18245 4bd65750b4a2e1e435e4b41f35cd9ab3 674 PANTHER PTHR33908 21 146 4.4E-15 T 22-04-2016