locus-tag class description CDC46_RS00005 PF00468 Ribosomal protein L34 CDC46_RS00010 PF00825 Ribonuclease P CDC46_RS00015 PF01809 Putative membrane protein insertion efficiency factor CDC46_RS00020 PF02096 60Kd inner membrane protein CDC46_RS00020 PF14849 YidC periplasmic domain CDC46_RS00025 PF01926 50S ribosome-binding GTPase CDC46_RS00025 PF12631 MnmE helical domain CDC46_RS00025 PF10396 GTP-binding protein TrmE N-terminus CDC46_RS00040 PF01165 Ribosomal protein S21 CDC46_RS00045 PF02321 Outer membrane efflux protein CDC46_RS00050 PF00873 AcrB/AcrD/AcrF family CDC46_RS00055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS00055 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS00060 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS00060 PF08361 MAATS-type transcriptional repressor, C-terminal region CDC46_RS00070 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS00070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDC46_RS00075 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CDC46_RS00080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC46_RS00080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC46_RS00090 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CDC46_RS00090 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CDC46_RS00095 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS00095 PF00072 Response regulator receiver domain CDC46_RS00105 PF01261 Xylose isomerase-like TIM barrel CDC46_RS00110 PF00072 Response regulator receiver domain CDC46_RS00110 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS00115 PF07730 Histidine kinase CDC46_RS00115 PF17200 Single Cache domain 2 CDC46_RS00120 PF02554 Carbon starvation protein CstA CDC46_RS00120 PF13722 5TM C-terminal transporter carbon starvation CstA CDC46_RS00125 PF04328 Selenoprotein, putative CDC46_RS00145 PF00561 alpha/beta hydrolase fold CDC46_RS00150 PF00171 Aldehyde dehydrogenase family CDC46_RS00155 PF00202 Aminotransferase class-III CDC46_RS00165 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS00175 PF00696 Amino acid kinase family CDC46_RS00180 PF04542 Sigma-70 region 2 CDC46_RS00180 PF08281 Sigma-70, region 4 CDC46_RS00210 PF00072 Response regulator receiver domain CDC46_RS00220 PF10431 C-terminal, D2-small domain, of ClpB protein CDC46_RS00220 PF07724 AAA domain (Cdc48 subfamily) CDC46_RS00220 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS00225 PF00227 Proteasome subunit CDC46_RS00230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC46_RS00235 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC46_RS00235 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC46_RS00240 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDC46_RS00245 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC46_RS00245 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC46_RS00260 PF01565 FAD binding domain CDC46_RS00260 PF08031 Berberine and berberine like CDC46_RS00265 PF10672 S-adenosylmethionine-dependent methyltransferase CDC46_RS00265 PF17785 PUA-like domain CDC46_RS00270 PF02899 Phage integrase, N-terminal SAM-like domain CDC46_RS00270 PF00589 Phage integrase family CDC46_RS00280 PF02934 GatB/GatE catalytic domain CDC46_RS00280 PF02637 GatB domain CDC46_RS00295 PF01425 Amidase CDC46_RS00300 PF02686 Glu-tRNAGln amidotransferase C subunit CDC46_RS00310 PF04085 rod shape-determining protein MreC CDC46_RS00320 PF03717 Penicillin-binding Protein dimerisation domain CDC46_RS00320 PF00905 Penicillin binding protein transpeptidase domain CDC46_RS00325 PF01098 Cell cycle protein CDC46_RS00330 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS00330 PF00501 AMP-binding enzyme CDC46_RS00335 PF03466 LysR substrate binding domain CDC46_RS00335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS00340 PF01131 DNA topoisomerase CDC46_RS00340 PF01751 Toprim domain CDC46_RS00350 PF17782 DprA winged helix domain CDC46_RS00350 PF02481 DNA recombination-mediator protein A CDC46_RS00355 PF01476 LysM domain CDC46_RS00360 PF01327 Polypeptide deformylase CDC46_RS00370 PF00551 Formyl transferase CDC46_RS00370 PF02911 Formyl transferase, C-terminal domain CDC46_RS00375 PF01810 LysE type translocator CDC46_RS00380 PF01435 Peptidase family M48 CDC46_RS00385 PF01189 16S rRNA methyltransferase RsmB/F CDC46_RS00385 PF01029 NusB family CDC46_RS00395 PF00672 HAMP domain CDC46_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS00395 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS00395 PF00989 PAS fold CDC46_RS00400 PF02954 Bacterial regulatory protein, Fis family CDC46_RS00400 PF00158 Sigma-54 interaction domain CDC46_RS00400 PF00072 Response regulator receiver domain CDC46_RS00425 PF00202 Aminotransferase class-III CDC46_RS00430 PF05853 beta-keto acid cleavage enzyme CDC46_RS00435 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS00440 PF01966 HD domain CDC46_RS00440 PF01743 Poly A polymerase head domain CDC46_RS00440 PF12627 Probable RNA and SrmB- binding site of polymerase A CDC46_RS00445 PF14497 Glutathione S-transferase, C-terminal domain CDC46_RS00445 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS00455 PF01464 Transglycosylase SLT domain CDC46_RS00455 PF14718 Soluble lytic murein transglycosylase L domain CDC46_RS00460 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDC46_RS00470 PF02219 Methylenetetrahydrofolate reductase CDC46_RS00475 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CDC46_RS00480 PF05221 S-adenosyl-L-homocysteine hydrolase CDC46_RS00480 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDC46_RS00495 PF00245 Alkaline phosphatase CDC46_RS00500 PF00245 Alkaline phosphatase CDC46_RS00550 PF06983 3-demethylubiquinone-9 3-methyltransferase CDC46_RS00555 PF02581 Thiamine monophosphate synthase CDC46_RS00560 PF05690 Thiazole biosynthesis protein ThiG CDC46_RS00575 PF01266 FAD dependent oxidoreductase CDC46_RS00580 PF01964 Radical SAM ThiC family CDC46_RS00580 PF13667 ThiC-associated domain CDC46_RS00585 PF03060 Nitronate monooxygenase CDC46_RS00625 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS00630 PF05199 GMC oxidoreductase CDC46_RS00630 PF00732 GMC oxidoreductase CDC46_RS00655 PF01037 Lrp/AsnC ligand binding domain CDC46_RS00665 PF00571 CBS domain CDC46_RS00665 PF00478 IMP dehydrogenase / GMP reductase domain CDC46_RS00685 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDC46_RS00685 PF02772 S-adenosylmethionine synthetase, central domain CDC46_RS00685 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDC46_RS00695 PF03279 Bacterial lipid A biosynthesis acyltransferase CDC46_RS00700 PF01678 Diaminopimelate epimerase CDC46_RS00705 PF03976 Polyphosphate kinase 2 (PPK2) CDC46_RS00710 PF00156 Phosphoribosyl transferase domain CDC46_RS00715 PF03372 Endonuclease/Exonuclease/phosphatase family CDC46_RS00720 PF05360 yiaA/B two helix domain CDC46_RS00725 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDC46_RS00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS00735 PF03466 LysR substrate binding domain CDC46_RS00745 PF02698 DUF218 domain CDC46_RS00765 PF00881 Nitroreductase family CDC46_RS00770 PF00892 EamA-like transporter family CDC46_RS00780 PF01435 Peptidase family M48 CDC46_RS00785 PF07690 Major Facilitator Superfamily CDC46_RS00795 PF00106 short chain dehydrogenase CDC46_RS00805 PF00491 Arginase family CDC46_RS00810 PF00202 Aminotransferase class-III CDC46_RS00815 PF03466 LysR substrate binding domain CDC46_RS00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS00820 PF00171 Aldehyde dehydrogenase family CDC46_RS00830 PF13533 Biotin-lipoyl like CDC46_RS00835 PF00005 ABC transporter CDC46_RS00845 PF02321 Outer membrane efflux protein CDC46_RS00855 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS00855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDC46_RS00860 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CDC46_RS00880 PF01040 UbiA prenyltransferase family CDC46_RS00885 PF02558 Ketopantoate reductase PanE/ApbA CDC46_RS00885 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDC46_RS00890 PF01171 PP-loop family CDC46_RS00900 PF14602 Hexapeptide repeat of succinyl-transferase CDC46_RS00900 PF12804 MobA-like NTP transferase domain CDC46_RS00900 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS00905 PF01380 SIS domain CDC46_RS00915 PF00582 Universal stress protein family CDC46_RS00935 PF00571 CBS domain CDC46_RS00940 PF00582 Universal stress protein family CDC46_RS00970 PF13545 Crp-like helix-turn-helix domain CDC46_RS00970 PF00027 Cyclic nucleotide-binding domain CDC46_RS00975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS00975 PF07730 Histidine kinase CDC46_RS00975 PF05231 MASE1 CDC46_RS00980 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS00980 PF00072 Response regulator receiver domain CDC46_RS00990 PF00107 Zinc-binding dehydrogenase CDC46_RS00990 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS00995 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CDC46_RS00995 PF02867 Ribonucleotide reductase, barrel domain CDC46_RS01005 PF00034 Cytochrome c CDC46_RS01015 PF01292 Prokaryotic cytochrome b561 CDC46_RS01030 PF00011 Hsp20/alpha crystallin family CDC46_RS01035 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDC46_RS01035 PF10996 Beta-Casp domain CDC46_RS01035 PF00753 Metallo-beta-lactamase superfamily CDC46_RS01040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDC46_RS01040 PF14572 Phosphoribosyl synthetase-associated domain CDC46_RS01050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CDC46_RS01050 PF02885 Glycosyl transferase family, helical bundle domain CDC46_RS01050 PF00591 Glycosyl transferase family, a/b domain CDC46_RS01060 PF03466 LysR substrate binding domain CDC46_RS01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS01065 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CDC46_RS01070 PF07690 Major Facilitator Superfamily CDC46_RS01105 PF01638 HxlR-like helix-turn-helix CDC46_RS01120 PF00958 GMP synthase C terminal domain CDC46_RS01120 PF02540 NAD synthase CDC46_RS01120 PF00117 Glutamine amidotransferase class-I CDC46_RS01125 PF03466 LysR substrate binding domain CDC46_RS01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS01135 PF07690 Major Facilitator Superfamily CDC46_RS01140 PF00248 Aldo/keto reductase family CDC46_RS01150 PF00708 Acylphosphatase CDC46_RS01165 PF06956 Regulator of RNA terminal phosphate cyclase CDC46_RS01165 PF00158 Sigma-54 interaction domain CDC46_RS01175 PF01139 tRNA-splicing ligase RtcB CDC46_RS01180 PF10127 RNA repair pathway DNA polymerase beta family CDC46_RS01185 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CDC46_RS01185 PF01137 RNA 3'-terminal phosphate cyclase CDC46_RS01195 PF00155 Aminotransferase class I and II CDC46_RS01205 PF06772 Bacterial low temperature requirement A protein (LtrA) CDC46_RS01240 PF01642 Methylmalonyl-CoA mutase CDC46_RS01240 PF02310 B12 binding domain CDC46_RS01250 PF07969 Amidohydrolase family CDC46_RS01270 PF03466 LysR substrate binding domain CDC46_RS01270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS01275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDC46_RS01275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDC46_RS01295 PF02796 Helix-turn-helix domain of resolvase CDC46_RS01295 PF00665 Integrase core domain CDC46_RS01300 PF01695 IstB-like ATP binding protein CDC46_RS01320 PF00872 Transposase, Mutator family CDC46_RS01325 PF02567 Phenazine biosynthesis-like protein CDC46_RS01340 PF00561 alpha/beta hydrolase fold CDC46_RS01365 PF00682 HMGL-like CDC46_RS01370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC46_RS01385 PF00289 Biotin carboxylase, N-terminal domain CDC46_RS01385 PF02785 Biotin carboxylase C-terminal domain CDC46_RS01385 PF00364 Biotin-requiring enzyme CDC46_RS01385 PF18140 Propionyl-coenzyme A carboxylase BT domain CDC46_RS01385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDC46_RS01400 PF04055 Radical SAM superfamily CDC46_RS01400 PF06968 Biotin and Thiamin Synthesis associated domain CDC46_RS01405 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS01415 PF01039 Carboxyl transferase domain CDC46_RS01425 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS01440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS01440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS01440 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS01445 PF00106 short chain dehydrogenase CDC46_RS01450 PF02803 Thiolase, C-terminal domain CDC46_RS01450 PF00108 Thiolase, N-terminal domain CDC46_RS01465 PF00484 Carbonic anhydrase CDC46_RS01470 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CDC46_RS01475 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS01475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS01475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS01480 PF13411 MerR HTH family regulatory protein CDC46_RS01490 PF03992 Antibiotic biosynthesis monooxygenase CDC46_RS01500 PF00106 short chain dehydrogenase CDC46_RS01505 PF13462 Thioredoxin CDC46_RS01515 PF03485 Arginyl tRNA synthetase N terminal domain CDC46_RS01515 PF00750 tRNA synthetases class I (R) CDC46_RS01515 PF05746 DALR anticodon binding domain CDC46_RS01525 PF07730 Histidine kinase CDC46_RS01525 PF17200 Single Cache domain 2 CDC46_RS01535 PF04397 LytTr DNA-binding domain CDC46_RS01535 PF00072 Response regulator receiver domain CDC46_RS01540 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS01540 PF00072 Response regulator receiver domain CDC46_RS01550 PF00809 Pterin binding enzyme CDC46_RS01550 PF02574 Homocysteine S-methyltransferase CDC46_RS01550 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDC46_RS01550 PF02310 B12 binding domain CDC46_RS01550 PF02607 B12 binding domain CDC46_RS01555 PF00809 Pterin binding enzyme CDC46_RS01555 PF02310 B12 binding domain CDC46_RS01555 PF02607 B12 binding domain CDC46_RS01555 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDC46_RS01555 PF02574 Homocysteine S-methyltransferase CDC46_RS01565 PF12091 Protein of unknown function (DUF3567) CDC46_RS01570 PF00561 alpha/beta hydrolase fold CDC46_RS01600 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS01615 PF00255 Glutathione peroxidase CDC46_RS01625 PF01467 Cytidylyltransferase-like CDC46_RS01635 PF03309 Type III pantothenate kinase CDC46_RS01640 PF02237 Biotin protein ligase C terminal domain CDC46_RS01640 PF03099 Biotin/lipoate A/B protein ligase family CDC46_RS01640 PF08279 HTH domain CDC46_RS01645 PF02405 Permease MlaE CDC46_RS01650 PF09383 NIL domain CDC46_RS01650 PF00005 ABC transporter CDC46_RS01675 PF05506 Domain of unknown function (DUF756) CDC46_RS01675 PF04185 Phosphoesterase family CDC46_RS01690 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CDC46_RS01690 PF04055 Radical SAM superfamily CDC46_RS01695 PF03099 Biotin/lipoate A/B protein ligase family CDC46_RS01705 PF03466 LysR substrate binding domain CDC46_RS01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS01710 PF04359 Protein of unknown function (DUF493) CDC46_RS01715 PF07943 Penicillin-binding protein 5, C-terminal domain CDC46_RS01715 PF00768 D-alanyl-D-alanine carboxypeptidase CDC46_RS01720 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CDC46_RS01730 PF00375 Sodium:dicarboxylate symporter family CDC46_RS01735 PF02743 Cache domain CDC46_RS01735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS01735 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS01740 PF02954 Bacterial regulatory protein, Fis family CDC46_RS01740 PF00158 Sigma-54 interaction domain CDC46_RS01740 PF00072 Response regulator receiver domain CDC46_RS01745 PF00578 AhpC/TSA family CDC46_RS01750 PF01661 Macro domain CDC46_RS01765 PF00264 Common central domain of tyrosinase CDC46_RS01770 PF01078 Magnesium chelatase, subunit ChlI CDC46_RS01770 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDC46_RS01780 PF04380 Membrane fusogenic activity CDC46_RS01790 PF00543 Nitrogen regulatory protein P-II CDC46_RS01795 PF00909 Ammonium Transporter Family CDC46_RS01805 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CDC46_RS01805 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CDC46_RS01815 PF00381 PTS HPr component phosphorylation site CDC46_RS01820 PF02896 PEP-utilising enzyme, TIM barrel domain CDC46_RS01820 PF05524 PEP-utilising enzyme, N-terminal CDC46_RS01820 PF00391 PEP-utilising enzyme, mobile domain CDC46_RS01830 PF00210 Ferritin-like domain CDC46_RS01835 PF00899 ThiF family CDC46_RS01840 PF03572 Peptidase family S41 CDC46_RS01840 PF13180 PDZ domain CDC46_RS01845 PF00300 Histidine phosphatase superfamily (branch 1) CDC46_RS01850 PF00581 Rhodanese-like domain CDC46_RS01855 PF00462 Glutaredoxin CDC46_RS01860 PF02556 Preprotein translocase subunit SecB CDC46_RS01865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDC46_RS01865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDC46_RS01870 PF00588 SpoU rRNA Methylase family CDC46_RS01875 PF00156 Phosphoribosyl transferase domain CDC46_RS01880 PF08241 Methyltransferase domain CDC46_RS01890 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CDC46_RS01890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDC46_RS01895 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS01900 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CDC46_RS01910 PF00510 Cytochrome c oxidase subunit III CDC46_RS01930 PF02628 Cytochrome oxidase assembly protein CDC46_RS01935 PF01040 UbiA prenyltransferase family CDC46_RS01940 PF02630 SCO1/SenC CDC46_RS01945 PF04542 Sigma-70 region 2 CDC46_RS01945 PF00140 Sigma-70 factor, region 1.2 CDC46_RS01945 PF04545 Sigma-70, region 4 CDC46_RS01950 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS01950 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS01950 PF13188 PAS domain CDC46_RS01950 PF00563 EAL domain CDC46_RS01960 PF05726 Pirin C-terminal cupin domain CDC46_RS01960 PF02678 Pirin CDC46_RS01965 PF02885 Glycosyl transferase family, helical bundle domain CDC46_RS01970 PF00005 ABC transporter CDC46_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS01990 PF03861 ANTAR domain CDC46_RS01990 PF08376 Nitrate and nitrite sensing CDC46_RS01995 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDC46_RS02000 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS02000 PF14497 Glutathione S-transferase, C-terminal domain CDC46_RS02010 PF02881 SRP54-type protein, helical bundle domain CDC46_RS02010 PF00448 SRP54-type protein, GTPase domain CDC46_RS02015 PF00675 Insulinase (Peptidase family M16) CDC46_RS02015 PF05193 Peptidase M16 inactive domain CDC46_RS02020 PF05193 Peptidase M16 inactive domain CDC46_RS02030 PF01467 Cytidylyltransferase-like CDC46_RS02035 PF00037 4Fe-4S binding domain CDC46_RS02045 PF01195 Peptidyl-tRNA hydrolase CDC46_RS02050 PF01386 Ribosomal L25p family CDC46_RS02050 PF14693 Ribosomal protein TL5, C-terminal domain CDC46_RS02055 PF14572 Phosphoribosyl synthetase-associated domain CDC46_RS02055 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDC46_RS02065 PF00288 GHMP kinases N terminal domain CDC46_RS02065 PF08544 GHMP kinases C terminal CDC46_RS02070 PF03550 Outer membrane lipoprotein LolB CDC46_RS02080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CDC46_RS02080 PF06827 Zinc finger found in FPG and IleRS CDC46_RS02080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CDC46_RS02090 PF10576 Iron-sulfur binding domain of endonuclease III CDC46_RS02090 PF00633 Helix-hairpin-helix motif CDC46_RS02090 PF00730 HhH-GPD superfamily base excision DNA repair protein CDC46_RS02090 PF14815 NUDIX domain CDC46_RS02100 PF03668 P-loop ATPase protein family CDC46_RS02110 PF07475 HPr Serine kinase C-terminal domain CDC46_RS02110 PF02603 HPr Serine kinase N terminus CDC46_RS02115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDC46_RS02120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDC46_RS02125 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDC46_RS02125 PF04963 Sigma-54 factor, core binding domain CDC46_RS02125 PF04552 Sigma-54, DNA binding domain CDC46_RS02130 PF00005 ABC transporter CDC46_RS02150 PF01380 SIS domain CDC46_RS02150 PF00571 CBS domain CDC46_RS02160 PF00999 Sodium/hydrogen exchanger family CDC46_RS02160 PF02080 TrkA-C domain CDC46_RS02160 PF02254 TrkA-N domain CDC46_RS02170 PF01965 DJ-1/PfpI family CDC46_RS02175 PF00156 Phosphoribosyl transferase domain CDC46_RS02180 PF01810 LysE type translocator CDC46_RS02190 PF17760 UvrA interaction domain CDC46_RS02190 PF17755 UvrA DNA-binding domain CDC46_RS02195 PF07690 Major Facilitator Superfamily CDC46_RS02200 PF00436 Single-strand binding protein family CDC46_RS02225 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS02225 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS02230 PF01522 Polysaccharide deacetylase CDC46_RS02250 PF07977 FabA-like domain CDC46_RS02280 PF04143 Sulphur transport CDC46_RS02285 PF07859 alpha/beta hydrolase fold CDC46_RS02295 PF01202 Shikimate kinase CDC46_RS02300 PF00501 AMP-binding enzyme CDC46_RS02300 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS02330 PF14489 QueF-like protein CDC46_RS02330 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CDC46_RS02335 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS02335 PF00585 C-terminal regulatory domain of Threonine dehydratase CDC46_RS02340 PF17655 Inward rectifier potassium channel C-terminal domain CDC46_RS02340 PF07885 Ion channel CDC46_RS02350 PF07670 Nucleoside recognition CDC46_RS02355 PF09335 SNARE associated Golgi protein CDC46_RS02370 PF00005 ABC transporter CDC46_RS02370 PF06472 ABC transporter transmembrane region 2 CDC46_RS02380 PF01209 ubiE/COQ5 methyltransferase family CDC46_RS02395 PF03109 ABC1 family CDC46_RS02400 PF05724 Thiopurine S-methyltransferase (TPMT) CDC46_RS02420 PF01336 OB-fold nucleic acid binding domain CDC46_RS02420 PF02938 GAD domain CDC46_RS02420 PF00152 tRNA synthetases class II (D, K and N) CDC46_RS02430 PF00293 NUDIX domain CDC46_RS02435 PF03372 Endonuclease/Exonuclease/phosphatase family CDC46_RS02440 PF13091 PLD-like domain CDC46_RS02445 PF01144 Coenzyme A transferase CDC46_RS02455 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDC46_RS02455 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS02455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS02455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS02460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDC46_RS02460 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS02460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDC46_RS02465 PF02803 Thiolase, C-terminal domain CDC46_RS02465 PF00108 Thiolase, N-terminal domain CDC46_RS02470 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS02475 PF03061 Thioesterase superfamily CDC46_RS02480 PF00005 ABC transporter CDC46_RS02480 PF00664 ABC transporter transmembrane region CDC46_RS02490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDC46_RS02490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDC46_RS02495 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS02510 PF00005 ABC transporter CDC46_RS02515 PF13230 Glutamine amidotransferases class-II CDC46_RS02525 PF13660 Domain of unknown function (DUF4147) CDC46_RS02525 PF05161 MOFRL family CDC46_RS02530 PF01979 Amidohydrolase family CDC46_RS02550 PF00572 Ribosomal protein L13 CDC46_RS02555 PF00380 Ribosomal protein S9/S16 CDC46_RS02570 PF01521 Iron-sulphur cluster biosynthesis CDC46_RS02575 PF03702 Anhydro-N-acetylmuramic acid kinase CDC46_RS02580 PF01479 S4 domain CDC46_RS02580 PF00579 tRNA synthetases class I (W and Y) CDC46_RS02585 PF02580 D-Tyr-tRNA(Tyr) deacylase CDC46_RS02595 PF00300 Histidine phosphatase superfamily (branch 1) CDC46_RS02600 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDC46_RS02600 PF17864 RuvB AAA lid domain CDC46_RS02600 PF05491 RuvB C-terminal winged helix domain CDC46_RS02605 PF07499 RuvA, C-terminal domain CDC46_RS02605 PF01330 RuvA N terminal domain CDC46_RS02615 PF02075 Crossover junction endodeoxyribonuclease RuvC CDC46_RS02620 PF01808 AICARFT/IMPCHase bienzyme CDC46_RS02620 PF02142 MGS-like domain CDC46_RS02625 PF02954 Bacterial regulatory protein, Fis family CDC46_RS02630 PF01207 Dihydrouridine synthase (Dus) CDC46_RS02640 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CDC46_RS02645 PF01266 FAD dependent oxidoreductase CDC46_RS02650 PF01494 FAD binding domain CDC46_RS02655 PF00557 Metallopeptidase family M24 CDC46_RS02655 PF05195 Aminopeptidase P, N-terminal domain CDC46_RS02660 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS02660 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS02660 PF00563 EAL domain CDC46_RS02665 PF00483 Nucleotidyl transferase CDC46_RS02680 PF01636 Phosphotransferase enzyme family CDC46_RS02685 PF04453 LPS transport system D CDC46_RS02695 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CDC46_RS02700 PF00398 Ribosomal RNA adenine dimethylase CDC46_RS02705 PF00892 EamA-like transporter family CDC46_RS02710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC46_RS02720 PF01553 Acyltransferase CDC46_RS02730 PF02092 Glycyl-tRNA synthetase beta subunit CDC46_RS02730 PF05746 DALR anticodon binding domain CDC46_RS02740 PF02091 Glycyl-tRNA synthetase alpha subunit CDC46_RS02745 PF00795 Carbon-nitrogen hydrolase CDC46_RS02750 PF00571 CBS domain CDC46_RS02750 PF03471 Transporter associated domain CDC46_RS02755 PF02130 Uncharacterized protein family UPF0054 CDC46_RS02760 PF02562 PhoH-like protein CDC46_RS02765 PF04055 Radical SAM superfamily CDC46_RS02765 PF01938 TRAM domain CDC46_RS02765 PF00919 Uncharacterized protein family UPF0004 CDC46_RS02775 PF13247 4Fe-4S dicluster domain CDC46_RS02775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDC46_RS02775 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS02805 PF09317 Domain of unknown function (DUF1974) CDC46_RS02805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS02805 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS02805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS02810 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS02820 PF00270 DEAD/DEAH box helicase CDC46_RS02820 PF00271 Helicase conserved C-terminal domain CDC46_RS02825 PF01636 Phosphotransferase enzyme family CDC46_RS02830 PF02678 Pirin CDC46_RS02830 PF05726 Pirin C-terminal cupin domain CDC46_RS02835 PF03466 LysR substrate binding domain CDC46_RS02835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS02840 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS02840 PF00072 Response regulator receiver domain CDC46_RS02850 PF01494 FAD binding domain CDC46_RS02865 PF00083 Sugar (and other) transporter CDC46_RS02865 PF08946 Osmosensory transporter coiled coil CDC46_RS02875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS02875 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS02875 PF08521 Two-component sensor kinase N-terminal CDC46_RS02880 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS02880 PF00072 Response regulator receiver domain CDC46_RS02885 PF00154 recA bacterial DNA recombination protein CDC46_RS02890 PF02631 RecX family CDC46_RS02900 PF08442 ATP-grasp domain CDC46_RS02900 PF00549 CoA-ligase CDC46_RS02905 PF02629 CoA binding domain CDC46_RS02905 PF00549 CoA-ligase CDC46_RS02910 PF03741 Integral membrane protein TerC family CDC46_RS02915 PF00114 Pilin (bacterial filament) CDC46_RS02915 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS02920 PF00114 Pilin (bacterial filament) CDC46_RS02920 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS02930 PF01967 MoaC family CDC46_RS02935 PF01435 Peptidase family M48 CDC46_RS02945 PF00561 alpha/beta hydrolase fold CDC46_RS02955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CDC46_RS02965 PF01063 Amino-transferase class IV CDC46_RS02980 PF00892 EamA-like transporter family CDC46_RS02985 PF00162 Phosphoglycerate kinase CDC46_RS02990 PF02887 Pyruvate kinase, alpha/beta domain CDC46_RS02990 PF00224 Pyruvate kinase, barrel domain CDC46_RS02995 PF01116 Fructose-bisphosphate aldolase class-II CDC46_RS03000 PF01259 SAICAR synthetase CDC46_RS03005 PF00731 AIR carboxylase CDC46_RS03015 PF03481 Putative GTP-binding controlling metal-binding CDC46_RS03015 PF01300 Telomere recombination CDC46_RS03030 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS03040 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CDC46_RS03045 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CDC46_RS03050 PF07690 Major Facilitator Superfamily CDC46_RS03065 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS03065 PF00563 EAL domain CDC46_RS03065 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS03070 PF01425 Amidase CDC46_RS03085 PF01966 HD domain CDC46_RS03085 PF11871 Domain of unknown function (DUF3391) CDC46_RS03115 PF00155 Aminotransferase class I and II CDC46_RS03115 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS03125 PF02470 MlaD protein CDC46_RS03130 PF04403 Paraquat-inducible protein A CDC46_RS03145 PF00756 Putative esterase CDC46_RS03150 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS03150 PF00107 Zinc-binding dehydrogenase CDC46_RS03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS03155 PF02203 Tar ligand binding domain homologue CDC46_RS03155 PF00672 HAMP domain CDC46_RS03160 PF13417 Glutathione S-transferase, N-terminal domain CDC46_RS03200 PF00892 EamA-like transporter family CDC46_RS03205 PF03466 LysR substrate binding domain CDC46_RS03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS03225 PF04381 Putative exonuclease, RdgC CDC46_RS03230 PF01292 Prokaryotic cytochrome b561 CDC46_RS03235 PF00174 Oxidoreductase molybdopterin binding domain CDC46_RS03250 PF03880 DbpA RNA binding domain CDC46_RS03250 PF00270 DEAD/DEAH box helicase CDC46_RS03250 PF00271 Helicase conserved C-terminal domain CDC46_RS03265 PF13823 Alcohol dehydrogenase GroES-associated CDC46_RS03265 PF00107 Zinc-binding dehydrogenase CDC46_RS03265 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS03270 PF12833 Helix-turn-helix domain CDC46_RS03270 PF06719 AraC-type transcriptional regulator N-terminus CDC46_RS03275 PF01799 [2Fe-2S] binding domain CDC46_RS03275 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS03280 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDC46_RS03290 PF00034 Cytochrome c CDC46_RS03305 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS03305 PF00107 Zinc-binding dehydrogenase CDC46_RS03310 PF03358 NADPH-dependent FMN reductase CDC46_RS03315 PF03466 LysR substrate binding domain CDC46_RS03315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS03325 PF17754 MftR C-terminal domain CDC46_RS03325 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS03330 PF00107 Zinc-binding dehydrogenase CDC46_RS03330 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS03345 PF00012 Hsp70 protein CDC46_RS03355 PF00166 Chaperonin 10 Kd subunit CDC46_RS03360 PF00118 TCP-1/cpn60 chaperonin family CDC46_RS03365 PF05987 Bacterial protein of unknown function (DUF898) CDC46_RS03410 PF00437 Type II/IV secretion system protein CDC46_RS03425 PF00263 Bacterial type II and III secretion system protein CDC46_RS03425 PF13629 Pilus formation protein N terminal region CDC46_RS03425 PF04972 BON domain CDC46_RS03470 PF04011 LemA family CDC46_RS03480 PF00701 Dihydrodipicolinate synthetase family CDC46_RS03485 PF00202 Aminotransferase class-III CDC46_RS03490 PF00301 Rubredoxin CDC46_RS03495 PF00072 Response regulator receiver domain CDC46_RS03500 PF00072 Response regulator receiver domain CDC46_RS03510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CDC46_RS03510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS03515 PF01627 Hpt domain CDC46_RS03515 PF01584 CheW-like domain CDC46_RS03515 PF02895 Signal transducing histidine kinase, homodimeric domain CDC46_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS03515 PF01627 Hpt domain CDC46_RS03515 PF00072 Response regulator receiver domain CDC46_RS03515 PF01584 CheW-like domain CDC46_RS03515 PF02895 Signal transducing histidine kinase, homodimeric domain CDC46_RS03515 PF00072 Response regulator receiver domain CDC46_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS03525 PF00849 RNA pseudouridylate synthase CDC46_RS03525 PF01479 S4 domain CDC46_RS03530 PF02622 Uncharacterized ACR, COG1678 CDC46_RS03535 PF03652 Holliday junction resolvase CDC46_RS03540 PF00156 Phosphoribosyl transferase domain CDC46_RS03545 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDC46_RS03545 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDC46_RS03550 PF01979 Amidohydrolase family CDC46_RS03555 PF01553 Acyltransferase CDC46_RS03560 PF00149 Calcineurin-like phosphoesterase CDC46_RS03565 PF16363 GDP-mannose 4,6 dehydratase CDC46_RS03570 PF04321 RmlD substrate binding domain CDC46_RS03575 PF00483 Nucleotidyl transferase CDC46_RS03580 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDC46_RS03600 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDC46_RS03600 PF00953 Glycosyl transferase family 4 CDC46_RS03610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDC46_RS03610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDC46_RS03610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDC46_RS03610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDC46_RS03615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CDC46_RS03620 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CDC46_RS03620 PF00534 Glycosyl transferases group 1 CDC46_RS03635 PF00581 Rhodanese-like domain CDC46_RS03635 PF01206 Sulfurtransferase TusA CDC46_RS03645 PF08361 MAATS-type transcriptional repressor, C-terminal region CDC46_RS03645 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS03655 PF03692 Putative zinc- or iron-chelating domain CDC46_RS03665 PF02673 Bacitracin resistance protein BacA CDC46_RS03670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDC46_RS03675 PF02390 Putative methyltransferase CDC46_RS03705 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CDC46_RS03710 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CDC46_RS03710 PF01464 Transglycosylase SLT domain CDC46_RS03715 PF00155 Aminotransferase class I and II CDC46_RS03720 PF01029 NusB family CDC46_RS03725 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDC46_RS03730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDC46_RS03730 PF00925 GTP cyclohydrolase II CDC46_RS03735 PF00677 Lumazine binding domain CDC46_RS03740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDC46_RS03740 PF01872 RibD C-terminal domain CDC46_RS03785 PF05567 Neisseria PilC beta-propeller domain CDC46_RS03805 PF03477 ATP cone domain CDC46_RS03810 PF00464 Serine hydroxymethyltransferase CDC46_RS03815 PF00106 short chain dehydrogenase CDC46_RS03820 PF03061 Thioesterase superfamily CDC46_RS03825 PF01618 MotA/TolQ/ExbB proton channel family CDC46_RS03830 PF02472 Biopolymer transport protein ExbD/TolR CDC46_RS03840 PF07676 WD40-like Beta Propeller Repeat CDC46_RS03840 PF04052 TolB amino-terminal domain CDC46_RS03845 PF00691 OmpA family CDC46_RS03855 PF06508 Queuosine biosynthesis protein QueC CDC46_RS03860 PF04143 Sulphur transport CDC46_RS03875 PF00072 Response regulator receiver domain CDC46_RS03880 PF04344 Chemotaxis phosphatase, CheZ CDC46_RS03885 PF00793 DAHP synthetase I family CDC46_RS03900 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CDC46_RS03905 PF00293 NUDIX domain CDC46_RS03910 PF03649 Uncharacterised protein family (UPF0014) CDC46_RS03915 PF00005 ABC transporter CDC46_RS03935 PF05957 Bacterial protein of unknown function (DUF883) CDC46_RS03940 PF00578 AhpC/TSA family CDC46_RS03940 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDC46_RS03950 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS03950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS03950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS03960 PF03301 Tryptophan 2,3-dioxygenase CDC46_RS03965 PF00266 Aminotransferase class-V CDC46_RS03970 PF04199 Putative cyclase CDC46_RS03975 PF01037 Lrp/AsnC ligand binding domain CDC46_RS03990 PF01625 Peptide methionine sulfoxide reductase CDC46_RS04005 PF01243 Pyridoxamine 5'-phosphate oxidase CDC46_RS04005 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CDC46_RS04010 PF00933 Glycosyl hydrolase family 3 N terminal domain CDC46_RS04020 PF00732 GMC oxidoreductase CDC46_RS04020 PF05199 GMC oxidoreductase CDC46_RS04025 PF00034 Cytochrome c CDC46_RS04025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CDC46_RS04030 PF05170 AsmA family CDC46_RS04035 PF00899 ThiF family CDC46_RS04045 PF01814 Hemerythrin HHE cation binding domain CDC46_RS04055 PF00085 Thioredoxin CDC46_RS04060 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS04060 PF00501 AMP-binding enzyme CDC46_RS04070 PF04752 ChaC-like protein CDC46_RS04085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDC46_RS04090 PF07152 YaeQ protein CDC46_RS04120 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDC46_RS04120 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDC46_RS04130 PF01970 Tripartite tricarboxylate transporter TctA family CDC46_RS04135 PF07331 Tripartite tricarboxylate transporter TctB family CDC46_RS04145 PF02515 CoA-transferase family III CDC46_RS04165 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS04165 PF00593 TonB dependent receptor CDC46_RS04175 PF01145 SPFH domain / Band 7 family CDC46_RS04185 PF03466 LysR substrate binding domain CDC46_RS04185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS04190 PF06779 Uncharacterised MFS-type transporter YbfB CDC46_RS04195 PF00596 Class II Aldolase and Adducin N-terminal domain CDC46_RS04200 PF01361 Tautomerase enzyme CDC46_RS04205 PF01212 Beta-eliminating lyase CDC46_RS04210 PF13344 Haloacid dehalogenase-like hydrolase CDC46_RS04210 PF00293 NUDIX domain CDC46_RS04215 PF01206 Sulfurtransferase TusA CDC46_RS04230 PF01810 LysE type translocator CDC46_RS04245 PF00043 Glutathione S-transferase, C-terminal domain CDC46_RS04245 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS04250 PF03330 Lytic transglycolase CDC46_RS04265 PF00881 Nitroreductase family CDC46_RS04285 PF03421 YopJ Serine/Threonine acetyltransferase CDC46_RS04305 PF07516 SecA Wing and Scaffold domain CDC46_RS04305 PF02810 SEC-C motif CDC46_RS04305 PF07517 SecA DEAD-like domain CDC46_RS04305 PF01043 SecA preprotein cross-linking domain CDC46_RS04360 PF05598 Transposase domain (DUF772) CDC46_RS04365 PF01555 DNA methylase CDC46_RS04370 PF01555 DNA methylase CDC46_RS04495 PF01850 PIN domain CDC46_RS04585 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CDC46_RS04585 PF08479 POTRA domain, ShlB-type CDC46_RS04585 PF17287 POTRA domain CDC46_RS04605 PF00239 Resolvase, N terminal domain CDC46_RS04605 PF02796 Helix-turn-helix domain of resolvase CDC46_RS04645 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS04660 PF00691 OmpA family CDC46_RS04665 PF00521 DNA gyrase/topoisomerase IV, subunit A CDC46_RS04665 PF03989 DNA gyrase C-terminal domain, beta-propeller CDC46_RS04675 PF00266 Aminotransferase class-V CDC46_RS04680 PF01817 Chorismate mutase type II CDC46_RS04680 PF00800 Prephenate dehydratase CDC46_RS04680 PF01842 ACT domain CDC46_RS04685 PF00155 Aminotransferase class I and II CDC46_RS04690 PF02153 Prephenate dehydrogenase CDC46_RS04690 PF01842 ACT domain CDC46_RS04695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDC46_RS04700 PF02224 Cytidylate kinase CDC46_RS04705 PF00575 S1 RNA binding domain CDC46_RS04710 PF00216 Bacterial DNA-binding protein CDC46_RS04720 PF18073 Rubredoxin metal binding domain CDC46_RS04725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDC46_RS04725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDC46_RS04725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDC46_RS04730 PF00294 pfkB family carbohydrate kinase CDC46_RS04735 PF01370 NAD dependent epimerase/dehydratase family CDC46_RS04745 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS04750 PF13406 Transglycosylase SLT domain CDC46_RS04755 PF00850 Histone deacetylase domain CDC46_RS04760 PF09383 NIL domain CDC46_RS04760 PF00005 ABC transporter CDC46_RS04765 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS04770 PF03180 NLPA lipoprotein CDC46_RS04775 PF01012 Electron transfer flavoprotein domain CDC46_RS04780 PF00766 Electron transfer flavoprotein FAD-binding domain CDC46_RS04780 PF01012 Electron transfer flavoprotein domain CDC46_RS04785 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDC46_RS04785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS04785 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS04785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS04790 PF01266 FAD dependent oxidoreductase CDC46_RS04795 PF01037 Lrp/AsnC ligand binding domain CDC46_RS04800 PF04055 Radical SAM superfamily CDC46_RS04820 PF07995 Glucose / Sorbosone dehydrogenase CDC46_RS04825 PF00886 Ribosomal protein S16 CDC46_RS04830 PF01782 RimM N-terminal domain CDC46_RS04830 PF05239 PRC-barrel domain CDC46_RS04835 PF01746 tRNA (Guanine-1)-methyltransferase CDC46_RS04840 PF01245 Ribosomal protein L19 CDC46_RS04845 PF00293 NUDIX domain CDC46_RS04850 PF17113 Regulatory signalling modulator protein AmpE CDC46_RS04850 PF03186 CobD/Cbib protein CDC46_RS04860 PF03193 RsgA GTPase CDC46_RS04865 PF01435 Peptidase family M48 CDC46_RS04870 PF00929 Exonuclease CDC46_RS04875 PF00994 Probable molybdopterin binding domain CDC46_RS04880 PF04751 Protein of unknown function (DUF615) CDC46_RS04890 PF00186 Dihydrofolate reductase CDC46_RS04895 PF00303 Thymidylate synthase CDC46_RS04900 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS04905 PF03741 Integral membrane protein TerC family CDC46_RS04910 PF10017 Histidine-specific methyltransferase, SAM-dependent CDC46_RS04915 PF12867 DinB superfamily CDC46_RS04915 PF03781 Sulfatase-modifying factor enzyme 1 CDC46_RS04920 PF00271 Helicase conserved C-terminal domain CDC46_RS04920 PF00270 DEAD/DEAH box helicase CDC46_RS04935 PF13296 Putative type VI secretion system Rhs element Vgr CDC46_RS04935 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS04935 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CDC46_RS04985 PF00589 Phage integrase family CDC46_RS04985 PF13356 Arm DNA-binding domain CDC46_RS05010 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS05020 PF00005 ABC transporter CDC46_RS05020 PF16326 ABC transporter C-terminal domain CDC46_RS05020 PF12848 ABC transporter CDC46_RS05025 PF00986 DNA gyrase B subunit, carboxyl terminus CDC46_RS05025 PF01751 Toprim domain CDC46_RS05025 PF00204 DNA gyrase B CDC46_RS05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS05035 PF00521 DNA gyrase/topoisomerase IV, subunit A CDC46_RS05050 PF02652 L-lactate permease CDC46_RS05065 PF13417 Glutathione S-transferase, N-terminal domain CDC46_RS05065 PF00043 Glutathione S-transferase, C-terminal domain CDC46_RS05070 PF00155 Aminotransferase class I and II CDC46_RS05080 PF00892 EamA-like transporter family CDC46_RS05085 PF02272 DHHA1 domain CDC46_RS05085 PF01411 tRNA synthetases class II (A) CDC46_RS05085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDC46_RS05090 PF00155 Aminotransferase class I and II CDC46_RS05095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS05095 PF00183 Hsp90 protein CDC46_RS05135 PF10431 C-terminal, D2-small domain, of ClpB protein CDC46_RS05135 PF07724 AAA domain (Cdc48 subfamily) CDC46_RS05135 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS05135 PF02861 Clp amino terminal domain, pathogenicity island component CDC46_RS05135 PF17871 AAA lid domain CDC46_RS05140 PF00034 Cytochrome c CDC46_RS05145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CDC46_RS05165 PF00881 Nitroreductase family CDC46_RS05170 PF10576 Iron-sulfur binding domain of endonuclease III CDC46_RS05170 PF00633 Helix-hairpin-helix motif CDC46_RS05170 PF00730 HhH-GPD superfamily base excision DNA repair protein CDC46_RS05175 PF04060 Putative Fe-S cluster CDC46_RS05180 PF17938 Tetracyclin repressor-like, C-terminal domain CDC46_RS05180 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS05200 PF00155 Aminotransferase class I and II CDC46_RS05205 PF12344 Ultra-violet resistance protein B CDC46_RS05205 PF00271 Helicase conserved C-terminal domain CDC46_RS05205 PF04851 Type III restriction enzyme, res subunit CDC46_RS05205 PF02151 UvrB/uvrC motif CDC46_RS05205 PF17757 UvrB interaction domain CDC46_RS05215 PF00294 pfkB family carbohydrate kinase CDC46_RS05220 PF00356 Bacterial regulatory proteins, lacI family CDC46_RS05225 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS05230 PF00005 ABC transporter CDC46_RS05235 PF13407 Periplasmic binding protein domain CDC46_RS05240 PF02082 Transcriptional regulator CDC46_RS05245 PF00266 Aminotransferase class-V CDC46_RS05250 PF01592 NifU-like N terminal domain CDC46_RS05255 PF01521 Iron-sulphur cluster biosynthesis CDC46_RS05265 PF00226 DnaJ domain CDC46_RS05265 PF07743 HSCB C-terminal oligomerisation domain CDC46_RS05270 PF00012 Hsp70 protein CDC46_RS05275 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS05280 PF04384 Iron-sulphur cluster assembly CDC46_RS05290 PF01336 OB-fold nucleic acid binding domain CDC46_RS05290 PF00152 tRNA synthetases class II (D, K and N) CDC46_RS05295 PF00106 short chain dehydrogenase CDC46_RS05310 PF02589 LUD domain CDC46_RS05320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC46_RS05320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC46_RS05335 PF03454 MoeA C-terminal region (domain IV) CDC46_RS05335 PF00994 Probable molybdopterin binding domain CDC46_RS05335 PF03453 MoeA N-terminal region (domain I and II) CDC46_RS05340 PF12804 MobA-like NTP transferase domain CDC46_RS05345 PF04055 Radical SAM superfamily CDC46_RS05345 PF06463 Molybdenum Cofactor Synthesis C CDC46_RS05350 PF00575 S1 RNA binding domain CDC46_RS05350 PF12111 Polyribonucleotide phosphorylase C terminal CDC46_RS05350 PF10150 Ribonuclease E/G family CDC46_RS05355 PF00849 RNA pseudouridylate synthase CDC46_RS05355 PF01479 S4 domain CDC46_RS05360 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS05370 PF06965 Na+/H+ antiporter 1 CDC46_RS05370 PF01343 Peptidase family S49 CDC46_RS05375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS05380 PF02545 Maf-like protein CDC46_RS05385 PF02620 Large ribosomal RNA subunit accumulation protein YceD CDC46_RS05390 PF01783 Ribosomal L32p protein family CDC46_RS05395 PF02504 Fatty acid synthesis protein CDC46_RS05400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDC46_RS05400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDC46_RS05405 PF00698 Acyl transferase domain CDC46_RS05415 PF00550 Phosphopantetheine attachment site CDC46_RS05420 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS05420 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS05430 PF04542 Sigma-70 region 2 CDC46_RS05430 PF08281 Sigma-70, region 4 CDC46_RS05445 PF17820 PDZ domain CDC46_RS05445 PF13180 PDZ domain CDC46_RS05455 PF06421 GTP-binding protein LepA C-terminus CDC46_RS05455 PF03144 Elongation factor Tu domain 2 CDC46_RS05455 PF00679 Elongation factor G C-terminus CDC46_RS05455 PF00009 Elongation factor Tu GTP binding domain CDC46_RS05460 PF10502 Signal peptidase, peptidase S26 CDC46_RS05470 PF14622 Ribonuclease-III-like CDC46_RS05470 PF00035 Double-stranded RNA binding motif CDC46_RS05475 PF01926 50S ribosome-binding GTPase CDC46_RS05475 PF07650 KH domain CDC46_RS05480 PF11967 Recombination protein O N terminal CDC46_RS05480 PF02565 Recombination protein O C terminal CDC46_RS05485 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CDC46_RS05490 PF01648 4'-phosphopantetheinyl transferase superfamily CDC46_RS05495 PF00933 Glycosyl hydrolase family 3 N terminal domain CDC46_RS05500 PF09285 Elongation factor P, C-terminal CDC46_RS05500 PF08207 Elongation factor P (EF-P) KOW-like domain CDC46_RS05500 PF01132 Elongation factor P (EF-P) OB domain CDC46_RS05510 PF02151 UvrB/uvrC motif CDC46_RS05510 PF08459 UvrC Helix-hairpin-helix N-terminal CDC46_RS05510 PF01541 GIY-YIG catalytic domain CDC46_RS05515 PF01066 CDP-alcohol phosphatidyltransferase CDC46_RS05540 PF00072 Response regulator receiver domain CDC46_RS05540 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS05550 PF16736 Single Cache-like CDC46_RS05550 PF00989 PAS fold CDC46_RS05550 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS05560 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS05560 PF00072 Response regulator receiver domain CDC46_RS05570 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS05570 PF07729 FCD domain CDC46_RS05575 PF13378 Enolase C-terminal domain-like CDC46_RS05575 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDC46_RS05580 PF07690 Major Facilitator Superfamily CDC46_RS05585 PF17137 Domain of unknown function (DUF5110) CDC46_RS05585 PF01055 Glycosyl hydrolases family 31 CDC46_RS05585 PF13802 Galactose mutarotase-like CDC46_RS05585 PF16338 Domain of unknown function (DUF4968) CDC46_RS05590 PF13609 Gram-negative porin CDC46_RS05600 PF13609 Gram-negative porin CDC46_RS05605 PF14497 Glutathione S-transferase, C-terminal domain CDC46_RS05605 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS05610 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDC46_RS05615 PF07883 Cupin domain CDC46_RS05620 PF00355 Rieske [2Fe-2S] domain CDC46_RS05625 PF13577 SnoaL-like domain CDC46_RS05630 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CDC46_RS05630 PF00355 Rieske [2Fe-2S] domain CDC46_RS05635 PF00970 Oxidoreductase FAD-binding domain CDC46_RS05635 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS05635 PF00175 Oxidoreductase NAD-binding domain CDC46_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS05640 PF03466 LysR substrate binding domain CDC46_RS05645 PF07690 Major Facilitator Superfamily CDC46_RS05650 PF03466 LysR substrate binding domain CDC46_RS05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS05660 PF00155 Aminotransferase class I and II CDC46_RS05665 PF01381 Helix-turn-helix CDC46_RS05670 PF12833 Helix-turn-helix domain CDC46_RS05670 PF01965 DJ-1/PfpI family CDC46_RS05680 PF01266 FAD dependent oxidoreductase CDC46_RS05685 PF04267 Sarcosine oxidase, delta subunit family CDC46_RS05690 PF17806 Sarcosine oxidase A3 domain CDC46_RS05690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS05690 PF01571 Aminomethyltransferase folate-binding domain CDC46_RS05690 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDC46_RS05705 PF00551 Formyl transferase CDC46_RS05715 PF12833 Helix-turn-helix domain CDC46_RS05715 PF01965 DJ-1/PfpI family CDC46_RS05730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS05730 PF03466 LysR substrate binding domain CDC46_RS05735 PF03601 Conserved hypothetical protein 698 CDC46_RS05760 PF11953 Domain of unknown function (DUF3470) CDC46_RS05760 PF00037 4Fe-4S binding domain CDC46_RS05765 PF01368 DHH family CDC46_RS05765 PF17768 RecJ OB domain CDC46_RS05765 PF02272 DHHA1 domain CDC46_RS05775 PF12704 MacB-like periplasmic core domain CDC46_RS05775 PF02687 FtsX-like permease family CDC46_RS05780 PF00005 ABC transporter CDC46_RS05785 PF01026 TatD related DNase CDC46_RS05790 PF00753 Metallo-beta-lactamase superfamily CDC46_RS05790 PF03772 Competence protein CDC46_RS05795 PF14403 Circularly permuted ATP-grasp type 2 CDC46_RS05805 PF01841 Transglutaminase-like superfamily CDC46_RS05805 PF08379 Bacterial transglutaminase-like N-terminal region CDC46_RS05815 PF08386 TAP-like protein CDC46_RS05815 PF00561 alpha/beta hydrolase fold CDC46_RS05820 PF06418 CTP synthase N-terminus CDC46_RS05820 PF00117 Glutamine amidotransferase class-I CDC46_RS05825 PF00793 DAHP synthetase I family CDC46_RS05835 PF03952 Enolase, N-terminal domain CDC46_RS05835 PF00113 Enolase, C-terminal TIM barrel domain CDC46_RS05840 PF04977 Septum formation initiator CDC46_RS05850 PF01430 Hsp33 protein CDC46_RS05855 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS05860 PF04305 Protein of unknown function (DUF455) CDC46_RS05865 PF00561 alpha/beta hydrolase fold CDC46_RS05885 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS05890 PF02811 PHP domain CDC46_RS05895 PF01300 Telomere recombination CDC46_RS05900 PF02163 Peptidase family M50 CDC46_RS05905 PF00579 tRNA synthetases class I (W and Y) CDC46_RS05915 PF00701 Dihydrodipicolinate synthetase family CDC46_RS05920 PF06804 NlpB/DapX lipoprotein CDC46_RS05925 PF03099 Biotin/lipoate A/B protein ligase family CDC46_RS05925 PF12706 Beta-lactamase superfamily domain CDC46_RS05935 PF08007 Cupin superfamily protein CDC46_RS05940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDC46_RS05950 PF00488 MutS domain V CDC46_RS05950 PF05188 MutS domain II CDC46_RS05950 PF01624 MutS domain I CDC46_RS05950 PF05192 MutS domain III CDC46_RS05950 PF05190 MutS family domain IV CDC46_RS05955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS05955 PF03466 LysR substrate binding domain CDC46_RS05960 PF07690 Major Facilitator Superfamily CDC46_RS05965 PF00248 Aldo/keto reductase family CDC46_RS05970 PF08269 Cache domain CDC46_RS05970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS05980 PF03475 3-alpha domain CDC46_RS05980 PF03473 MOSC domain CDC46_RS05985 PF00117 Glutamine amidotransferase class-I CDC46_RS05990 PF08671 Anti-repressor SinI CDC46_RS05990 PF01381 Helix-turn-helix CDC46_RS05995 PF00459 Inositol monophosphatase family CDC46_RS06000 PF00588 SpoU rRNA Methylase family CDC46_RS06005 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS06010 PF00149 Calcineurin-like phosphoesterase CDC46_RS06015 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDC46_RS06020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDC46_RS06030 PF01406 tRNA synthetases class I (C) catalytic domain CDC46_RS06030 PF09190 DALR domain CDC46_RS06035 PF00730 HhH-GPD superfamily base excision DNA repair protein CDC46_RS06040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDC46_RS06045 PF01171 PP-loop family CDC46_RS06045 PF09179 TilS substrate binding domain CDC46_RS06045 PF11734 TilS substrate C-terminal domain CDC46_RS06050 PF13840 ACT domain CDC46_RS06050 PF01842 ACT domain CDC46_RS06050 PF00696 Amino acid kinase family CDC46_RS06065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC46_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06075 PF12911 N-terminal TM domain of oligopeptide transport permease C CDC46_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06080 PF00005 ABC transporter CDC46_RS06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC46_RS06085 PF00877 NlpC/P60 family CDC46_RS06090 PF01734 Patatin-like phospholipase CDC46_RS06095 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDC46_RS06130 PF01554 MatE CDC46_RS06140 PF01197 Ribosomal protein L31 CDC46_RS06150 PF06167 Glucose-regulated metallo-peptidase M90 CDC46_RS06155 PF00072 Response regulator receiver domain CDC46_RS06155 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS06160 PF02954 Bacterial regulatory protein, Fis family CDC46_RS06160 PF00072 Response regulator receiver domain CDC46_RS06160 PF00158 Sigma-54 interaction domain CDC46_RS06165 PF07498 Rho termination factor, N-terminal domain CDC46_RS06165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC46_RS06165 PF07497 Rho termination factor, RNA-binding domain CDC46_RS06170 PF00085 Thioredoxin CDC46_RS06180 PF12705 PD-(D/E)XK nuclease superfamily CDC46_RS06180 PF00580 UvrD/REP helicase N-terminal domain CDC46_RS06180 PF13361 UvrD-like helicase C-terminal domain CDC46_RS06190 PF12170 DNA polymerase III tau subunit V interacting with alpha CDC46_RS06190 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CDC46_RS06190 PF12169 DNA polymerase III subunits gamma and tau domain III CDC46_RS06195 PF02575 YbaB/EbfC DNA-binding family CDC46_RS06200 PF13662 Toprim domain CDC46_RS06200 PF02132 RecR protein CDC46_RS06215 PF02515 CoA-transferase family III CDC46_RS06225 PF00005 ABC transporter CDC46_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06235 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS06235 PF16925 Tetracyclin repressor-like, C-terminal domain CDC46_RS06240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDC46_RS06245 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS06245 PF16197 Ketoacyl-synthetase C-terminal extension CDC46_RS06245 PF00550 Phosphopantetheine attachment site CDC46_RS06245 PF14765 Polyketide synthase dehydratase CDC46_RS06245 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS06245 PF08990 Erythronolide synthase docking CDC46_RS06245 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS06245 PF00698 Acyl transferase domain CDC46_RS06245 PF08659 KR domain CDC46_RS06250 PF01975 Survival protein SurE CDC46_RS06260 PF01551 Peptidase family M23 CDC46_RS06260 PF01476 LysM domain CDC46_RS06265 PF04542 Sigma-70 region 2 CDC46_RS06265 PF04545 Sigma-70, region 4 CDC46_RS06265 PF00140 Sigma-70 factor, region 1.2 CDC46_RS06265 PF04539 Sigma-70 region 3 CDC46_RS06275 PF05958 tRNA (Uracil-5-)-methyltransferase CDC46_RS06275 PF01938 TRAM domain CDC46_RS06280 PF01027 Inhibitor of apoptosis-promoting Bax1 CDC46_RS06285 PF00334 Nucleoside diphosphate kinase CDC46_RS06290 PF04055 Radical SAM superfamily CDC46_RS06305 PF04551 GcpE protein CDC46_RS06310 PF03129 Anticodon binding domain CDC46_RS06310 PF13393 Histidyl-tRNA synthetase CDC46_RS06315 PF09976 Tetratricopeptide repeat-like domain CDC46_RS06320 PF13360 PQQ-like domain CDC46_RS06325 PF01926 50S ribosome-binding GTPase CDC46_RS06325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDC46_RS06330 PF17209 Hfq protein CDC46_RS06335 PF16360 GTP-binding GTPase Middle Region CDC46_RS06335 PF13167 GTP-binding GTPase N-terminal CDC46_RS06335 PF01926 50S ribosome-binding GTPase CDC46_RS06340 PF01145 SPFH domain / Band 7 family CDC46_RS06340 PF12221 Bacterial membrane protein N terminal CDC46_RS06345 PF01145 SPFH domain / Band 7 family CDC46_RS06355 PF13393 Histidyl-tRNA synthetase CDC46_RS06360 PF00709 Adenylosuccinate synthetase CDC46_RS06365 PF00156 Phosphoribosyl transferase domain CDC46_RS06375 PF17876 Cold shock domain CDC46_RS06375 PF00575 S1 RNA binding domain CDC46_RS06375 PF00773 RNB domain CDC46_RS06375 PF08206 Ribonuclease B OB domain CDC46_RS06375 PF08461 Ribonuclease R winged-helix domain CDC46_RS06380 PF00588 SpoU rRNA Methylase family CDC46_RS06380 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDC46_RS06385 PF02146 Sir2 family CDC46_RS06390 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDC46_RS06395 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CDC46_RS06400 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CDC46_RS06405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS06405 PF00672 HAMP domain CDC46_RS06410 PF04362 Bacterial Fe(2+) trafficking CDC46_RS06415 PF00267 Gram-negative porin CDC46_RS06420 PF04962 KduI/IolB family CDC46_RS06425 PF01261 Xylose isomerase-like TIM barrel CDC46_RS06430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC46_RS06430 PF00205 Thiamine pyrophosphate enzyme, central domain CDC46_RS06430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC46_RS06435 PF00294 pfkB family carbohydrate kinase CDC46_RS06440 PF13407 Periplasmic binding protein domain CDC46_RS06445 PF00005 ABC transporter CDC46_RS06450 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS06455 PF01261 Xylose isomerase-like TIM barrel CDC46_RS06465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDC46_RS06465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDC46_RS06475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDC46_RS06475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDC46_RS06480 PF01380 SIS domain CDC46_RS06480 PF01418 Helix-turn-helix domain, rpiR family CDC46_RS06485 PF00696 Amino acid kinase family CDC46_RS06485 PF00583 Acetyltransferase (GNAT) family CDC46_RS06515 PF02464 Competence-damaged protein CDC46_RS06515 PF18146 Damage-inducible protein CinA KH domain CDC46_RS06515 PF00994 Probable molybdopterin binding domain CDC46_RS06525 PF00120 Glutamine synthetase, catalytic domain CDC46_RS06525 PF03951 Glutamine synthetase, beta-Grasp domain CDC46_RS06535 PF00989 PAS fold CDC46_RS06535 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS06540 PF02954 Bacterial regulatory protein, Fis family CDC46_RS06540 PF00072 Response regulator receiver domain CDC46_RS06540 PF00158 Sigma-54 interaction domain CDC46_RS06550 PF00403 Heavy-metal-associated domain CDC46_RS06555 PF13416 Bacterial extracellular solute-binding protein CDC46_RS06560 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06565 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06570 PF17912 MalK OB fold domain CDC46_RS06570 PF00005 ABC transporter CDC46_RS06575 PF03009 Glycerophosphoryl diester phosphodiesterase family CDC46_RS06580 PF00676 Dehydrogenase E1 component CDC46_RS06580 PF02779 Transketolase, pyrimidine binding domain CDC46_RS06580 PF16078 2-oxoglutarate dehydrogenase N-terminus CDC46_RS06580 PF16870 2-oxoglutarate dehydrogenase C-terminal CDC46_RS06585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDC46_RS06585 PF00364 Biotin-requiring enzyme CDC46_RS06585 PF02817 e3 binding domain CDC46_RS06590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDC46_RS06590 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS06595 PF03969 AFG1-like ATPase CDC46_RS06605 PF00403 Heavy-metal-associated domain CDC46_RS06615 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS06630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CDC46_RS06630 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CDC46_RS06635 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CDC46_RS06635 PF12801 4Fe-4S binding domain CDC46_RS06635 PF13746 4Fe-4S dicluster domain CDC46_RS06650 PF13545 Crp-like helix-turn-helix domain CDC46_RS06650 PF00027 Cyclic nucleotide-binding domain CDC46_RS06660 PF04079 Segregation and condensation complex subunit ScpB CDC46_RS06665 PF01479 S4 domain CDC46_RS06665 PF00849 RNA pseudouridylate synthase CDC46_RS06670 PF17384 RimP C-terminal SH3 domain CDC46_RS06670 PF02576 RimP N-terminal domain CDC46_RS06675 PF08529 NusA N-terminal domain CDC46_RS06675 PF13184 NusA-like KH domain CDC46_RS06680 PF08364 Bacterial translation initiation factor IF-2 associated region CDC46_RS06680 PF00009 Elongation factor Tu GTP binding domain CDC46_RS06680 PF04760 Translation initiation factor IF-2, N-terminal region CDC46_RS06680 PF11987 Translation-initiation factor 2 CDC46_RS06685 PF02033 Ribosome-binding factor A CDC46_RS06690 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDC46_RS06690 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDC46_RS06690 PF09157 Pseudouridine synthase II TruB, C-terminal CDC46_RS06695 PF07690 Major Facilitator Superfamily CDC46_RS06700 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS06700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS06705 PF02321 Outer membrane efflux protein CDC46_RS06710 PF01047 MarR family CDC46_RS06715 PF03144 Elongation factor Tu domain 2 CDC46_RS06715 PF00009 Elongation factor Tu GTP binding domain CDC46_RS06715 PF00679 Elongation factor G C-terminus CDC46_RS06725 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS06730 PF01207 Dihydrouridine synthase (Dus) CDC46_RS06750 PF07687 Peptidase dimerisation domain CDC46_RS06750 PF01546 Peptidase family M20/M25/M40 CDC46_RS06765 PF01726 LexA DNA binding domain CDC46_RS06765 PF00717 Peptidase S24-like CDC46_RS06770 PF00970 Oxidoreductase FAD-binding domain CDC46_RS06770 PF00175 Oxidoreductase NAD-binding domain CDC46_RS06775 PF17763 Glutaminase/Asparaginase C-terminal domain CDC46_RS06775 PF00710 Asparaginase, N-terminal CDC46_RS06780 PF01250 Ribosomal protein S6 CDC46_RS06790 PF01084 Ribosomal protein S18 CDC46_RS06795 PF03948 Ribosomal protein L9, C-terminal domain CDC46_RS06795 PF01281 Ribosomal protein L9, N-terminal domain CDC46_RS06800 PF00772 DnaB-like helicase N terminal domain CDC46_RS06800 PF03796 DnaB-like helicase C terminal domain CDC46_RS06810 PF01384 Phosphate transporter family CDC46_RS06815 PF00877 NlpC/P60 family CDC46_RS06825 PF02562 PhoH-like protein CDC46_RS06825 PF13638 PIN domain CDC46_RS06830 PF00578 AhpC/TSA family CDC46_RS06835 PF01522 Polysaccharide deacetylase CDC46_RS06840 PF02911 Formyl transferase, C-terminal domain CDC46_RS06840 PF01370 NAD dependent epimerase/dehydratase family CDC46_RS06840 PF00551 Formyl transferase CDC46_RS06845 PF00551 Formyl transferase CDC46_RS06845 PF02911 Formyl transferase, C-terminal domain CDC46_RS06845 PF01370 NAD dependent epimerase/dehydratase family CDC46_RS06850 PF00535 Glycosyl transferase family 2 CDC46_RS06855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDC46_RS06860 PF00892 EamA-like transporter family CDC46_RS06865 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CDC46_RS06875 PF00155 Aminotransferase class I and II CDC46_RS06880 PF01842 ACT domain CDC46_RS06880 PF00742 Homoserine dehydrogenase CDC46_RS06880 PF03447 Homoserine dehydrogenase, NAD binding domain CDC46_RS06885 PF14821 Threonine synthase N terminus CDC46_RS06885 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS06890 PF03167 Uracil DNA glycosylase superfamily CDC46_RS06895 PF03454 MoeA C-terminal region (domain IV) CDC46_RS06895 PF03453 MoeA N-terminal region (domain I and II) CDC46_RS06895 PF00994 Probable molybdopterin binding domain CDC46_RS06900 PF02597 ThiS family CDC46_RS06905 PF02391 MoaE protein CDC46_RS06910 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CDC46_RS06915 PF10605 3HB-oligomer hydrolase (3HBOH) CDC46_RS06920 PF02861 Clp amino terminal domain, pathogenicity island component CDC46_RS06920 PF10431 C-terminal, D2-small domain, of ClpB protein CDC46_RS06920 PF07724 AAA domain (Cdc48 subfamily) CDC46_RS06920 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS06920 PF17871 AAA lid domain CDC46_RS06930 PF03358 NADPH-dependent FMN reductase CDC46_RS06935 PF09084 NMT1/THI5 like CDC46_RS06940 PF00296 Luciferase-like monooxygenase CDC46_RS06945 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06950 PF00005 ABC transporter CDC46_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06975 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS06985 PF03466 LysR substrate binding domain CDC46_RS07000 PF07694 5TMR of 5TMR-LYT CDC46_RS07000 PF06580 Histidine kinase CDC46_RS07005 PF00072 Response regulator receiver domain CDC46_RS07005 PF04397 LytTr DNA-binding domain CDC46_RS07010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC46_RS07010 PF00205 Thiamine pyrophosphate enzyme, central domain CDC46_RS07010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC46_RS07015 PF03737 Aldolase/RraA CDC46_RS07035 PF00463 Isocitrate lyase family CDC46_RS07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS07045 PF03466 LysR substrate binding domain CDC46_RS07060 PF01274 Malate synthase CDC46_RS07070 PF07690 Major Facilitator Superfamily CDC46_RS07080 PF00814 Glycoprotease family CDC46_RS07085 PF00583 Acetyltransferase (GNAT) family CDC46_RS07090 PF03167 Uracil DNA glycosylase superfamily CDC46_RS07095 PF07690 Major Facilitator Superfamily CDC46_RS07100 PF01168 Alanine racemase, N-terminal domain CDC46_RS07100 PF00842 Alanine racemase, C-terminal domain CDC46_RS07105 PF18073 Rubredoxin metal binding domain CDC46_RS07110 PF02600 Disulfide bond formation protein DsbB CDC46_RS07115 PF04463 Protein of unknown function (DUF523) CDC46_RS07120 PF02515 CoA-transferase family III CDC46_RS07125 PF12848 ABC transporter CDC46_RS07125 PF00005 ABC transporter CDC46_RS07135 PF01112 Asparaginase CDC46_RS07140 PF00005 ABC transporter CDC46_RS07140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC46_RS07145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC46_RS07150 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS07155 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS07155 PF12911 N-terminal TM domain of oligopeptide transport permease C CDC46_RS07160 PF03576 Peptidase family S58 CDC46_RS07180 PF01227 GTP cyclohydrolase I CDC46_RS07185 PF05175 Methyltransferase small domain CDC46_RS07195 PF01546 Peptidase family M20/M25/M40 CDC46_RS07195 PF07687 Peptidase dimerisation domain CDC46_RS07200 PF03960 ArsC family CDC46_RS07210 PF14602 Hexapeptide repeat of succinyl-transferase CDC46_RS07210 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CDC46_RS07210 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS07215 PF00155 Aminotransferase class I and II CDC46_RS07225 PF00561 alpha/beta hydrolase fold CDC46_RS07240 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDC46_RS07240 PF01653 NAD-dependent DNA ligase adenylation domain CDC46_RS07240 PF03120 NAD-dependent DNA ligase OB-fold domain CDC46_RS07240 PF12826 Helix-hairpin-helix motif CDC46_RS07240 PF00533 BRCA1 C Terminus (BRCT) domain CDC46_RS07245 PF01327 Polypeptide deformylase CDC46_RS07255 PF00849 RNA pseudouridylate synthase CDC46_RS07255 PF01479 S4 domain CDC46_RS07260 PF01966 HD domain CDC46_RS07260 PF01909 Nucleotidyltransferase domain CDC46_RS07260 PF08335 GlnD PII-uridylyltransferase CDC46_RS07265 PF00557 Metallopeptidase family M24 CDC46_RS07270 PF00318 Ribosomal protein S2 CDC46_RS07275 PF00889 Elongation factor TS CDC46_RS07280 PF00696 Amino acid kinase family CDC46_RS07285 PF01765 Ribosome recycling factor CDC46_RS07290 PF01255 Putative undecaprenyl diphosphate synthase CDC46_RS07300 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDC46_RS07300 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDC46_RS07300 PF13288 DXP reductoisomerase C-terminal domain CDC46_RS07305 PF02163 Peptidase family M50 CDC46_RS07305 PF17820 PDZ domain CDC46_RS07310 PF01103 Surface antigen CDC46_RS07310 PF07244 Surface antigen variable number repeat CDC46_RS07315 PF03938 Outer membrane protein (OmpH-like) CDC46_RS07320 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS07320 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CDC46_RS07325 PF07977 FabA-like domain CDC46_RS07330 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CDC46_RS07330 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS07335 PF02684 Lipid-A-disaccharide synthetase CDC46_RS07340 PF01351 Ribonuclease HII CDC46_RS07345 PF00588 SpoU rRNA Methylase family CDC46_RS07345 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDC46_RS07350 PF03618 Kinase/pyrophosphorylase CDC46_RS07355 PF00391 PEP-utilising enzyme, mobile domain CDC46_RS07355 PF02896 PEP-utilising enzyme, TIM barrel domain CDC46_RS07355 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDC46_RS07365 PF01145 SPFH domain / Band 7 family CDC46_RS07365 PF16200 C-terminal region of band_7 CDC46_RS07370 PF01668 SmpB protein CDC46_RS07375 PF03364 Polyketide cyclase / dehydrase and lipid transport CDC46_RS07380 PF03658 RnfH family Ubiquitin CDC46_RS07390 PF00892 EamA-like transporter family CDC46_RS07395 PF00571 CBS domain CDC46_RS07395 PF00478 IMP dehydrogenase / GMP reductase domain CDC46_RS07405 PF00117 Glutamine amidotransferase class-I CDC46_RS07405 PF00958 GMP synthase C terminal domain CDC46_RS07405 PF02540 NAD synthase CDC46_RS07465 PF03466 LysR substrate binding domain CDC46_RS07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS07470 PF00775 Dioxygenase CDC46_RS07470 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CDC46_RS07475 PF00775 Dioxygenase CDC46_RS07495 PF07804 HipA-like C-terminal domain CDC46_RS07495 PF13657 HipA N-terminal domain CDC46_RS07520 PF01242 6-pyruvoyl tetrahydropterin synthase CDC46_RS07525 PF14437 MafB19-like deaminase CDC46_RS07530 PF17676 LD-carboxypeptidase C-terminal domain CDC46_RS07530 PF02016 LD-carboxypeptidase N-terminal domain CDC46_RS07535 PF00005 ABC transporter CDC46_RS07535 PF12848 ABC transporter CDC46_RS07550 PF00171 Aldehyde dehydrogenase family CDC46_RS07560 PF00723 Glycosyl hydrolases family 15 CDC46_RS07570 PF00672 HAMP domain CDC46_RS07570 PF02203 Tar ligand binding domain homologue CDC46_RS07570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS07575 PF02308 MgtC family CDC46_RS07580 PF07993 Male sterility protein CDC46_RS07580 PF00550 Phosphopantetheine attachment site CDC46_RS07580 PF00501 AMP-binding enzyme CDC46_RS07585 PF13478 XdhC Rossmann domain CDC46_RS07585 PF02625 XdhC and CoxI family CDC46_RS07610 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDC46_RS07610 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDC46_RS07615 PF01799 [2Fe-2S] binding domain CDC46_RS07615 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS07620 PF05981 CreA protein CDC46_RS07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS07625 PF03466 LysR substrate binding domain CDC46_RS07650 PF00202 Aminotransferase class-III CDC46_RS07655 PF00155 Aminotransferase class I and II CDC46_RS07725 PF13356 Arm DNA-binding domain CDC46_RS07725 PF00589 Phage integrase family CDC46_RS07755 PF00248 Aldo/keto reductase family CDC46_RS07760 PF00264 Common central domain of tyrosinase CDC46_RS07775 PF00582 Universal stress protein family CDC46_RS07815 PF00075 RNase H CDC46_RS07820 PF08241 Methyltransferase domain CDC46_RS07825 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDC46_RS07825 PF00753 Metallo-beta-lactamase superfamily CDC46_RS07830 PF01476 LysM domain CDC46_RS07830 PF01464 Transglycosylase SLT domain CDC46_RS07835 PF16177 Acetyl-coenzyme A synthetase N-terminus CDC46_RS07835 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS07835 PF00501 AMP-binding enzyme CDC46_RS07840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDC46_RS07840 PF00117 Glutamine amidotransferase class-I CDC46_RS07845 PF01810 LysE type translocator CDC46_RS07850 PF02142 MGS-like domain CDC46_RS07850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDC46_RS07850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDC46_RS07855 PF03449 Transcription elongation factor, N-terminal CDC46_RS07855 PF01272 Transcription elongation factor, GreA/GreB, C-term CDC46_RS07865 PF01985 CRS1 / YhbY (CRM) domain CDC46_RS07870 PF01728 FtsJ-like methyltransferase CDC46_RS07875 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS07875 PF17862 AAA+ lid domain CDC46_RS07875 PF06480 FtsH Extracellular CDC46_RS07875 PF01434 Peptidase family M41 CDC46_RS07880 PF00809 Pterin binding enzyme CDC46_RS07885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDC46_RS07885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDC46_RS07885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDC46_RS07885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDC46_RS07890 PF12849 PBP superfamily domain CDC46_RS07895 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS07900 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS07905 PF00005 ABC transporter CDC46_RS07910 PF01895 PhoU domain CDC46_RS07915 PF00072 Response regulator receiver domain CDC46_RS07915 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS07920 PF00989 PAS fold CDC46_RS07920 PF11808 Phosphate regulon sensor protein PhoR CDC46_RS07920 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS07925 PF13089 Polyphosphate kinase N-terminal domain CDC46_RS07925 PF13090 Polyphosphate kinase C-terminal domain 2 CDC46_RS07925 PF02503 Polyphosphate kinase middle domain CDC46_RS07925 PF17941 Polyphosphate kinase C-terminal domain 1 CDC46_RS07930 PF02541 Ppx/GppA phosphatase family CDC46_RS07955 PF01925 Sulfite exporter TauE/SafE CDC46_RS07970 PF00753 Metallo-beta-lactamase superfamily CDC46_RS07975 PF00563 EAL domain CDC46_RS07975 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS07975 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS07975 PF13188 PAS domain CDC46_RS07985 PF00202 Aminotransferase class-III CDC46_RS08015 PF01527 Transposase CDC46_RS08040 PF00589 Phage integrase family CDC46_RS08060 PF01565 FAD binding domain CDC46_RS08060 PF02913 FAD linked oxidases, C-terminal domain CDC46_RS08070 PF03358 NADPH-dependent FMN reductase CDC46_RS08075 PF03631 Virulence factor BrkB CDC46_RS08090 PF01053 Cys/Met metabolism PLP-dependent enzyme CDC46_RS08100 PF07690 Major Facilitator Superfamily CDC46_RS08105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDC46_RS08105 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CDC46_RS08110 PF01264 Chorismate synthase CDC46_RS08125 PF00072 Response regulator receiver domain CDC46_RS08125 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS08130 PF01144 Coenzyme A transferase CDC46_RS08135 PF01144 Coenzyme A transferase CDC46_RS08140 PF00106 short chain dehydrogenase CDC46_RS08150 PF01042 Endoribonuclease L-PSP CDC46_RS08155 PF04607 Region found in RelA / SpoT proteins CDC46_RS08155 PF02824 TGS domain CDC46_RS08155 PF13291 ACT domain CDC46_RS08165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDC46_RS08165 PF02824 TGS domain CDC46_RS08165 PF03129 Anticodon binding domain CDC46_RS08165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDC46_RS08170 PF00707 Translation initiation factor IF-3, C-terminal domain CDC46_RS08170 PF05198 Translation initiation factor IF-3, N-terminal domain CDC46_RS08175 PF01632 Ribosomal protein L35 CDC46_RS08180 PF00453 Ribosomal protein L20 CDC46_RS08185 PF01409 tRNA synthetases class II core domain (F) CDC46_RS08185 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDC46_RS08190 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDC46_RS08190 PF01588 Putative tRNA binding domain CDC46_RS08190 PF03483 B3/4 domain CDC46_RS08190 PF03484 tRNA synthetase B5 domain CDC46_RS08190 PF03147 Ferredoxin-fold anticodon binding domain CDC46_RS08195 PF00216 Bacterial DNA-binding protein CDC46_RS08220 PF00817 impB/mucB/samB family CDC46_RS08220 PF11799 impB/mucB/samB family C-terminal domain CDC46_RS08225 PF13520 Amino acid permease CDC46_RS08240 PF03328 HpcH/HpaI aldolase/citrate lyase family CDC46_RS08245 PF01047 MarR family CDC46_RS08255 PF07969 Amidohydrolase family CDC46_RS08260 PF01432 Peptidase family M3 CDC46_RS08265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDC46_RS08265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDC46_RS08270 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS08270 PF00072 Response regulator receiver domain CDC46_RS08275 PF00989 PAS fold CDC46_RS08275 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS08280 PF17831 Pyruvate dehydrogenase E1 component middle domain CDC46_RS08280 PF00456 Transketolase, thiamine diphosphate binding domain CDC46_RS08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS08295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDC46_RS08305 PF09361 Phasin protein CDC46_RS08310 PF00850 Histone deacetylase domain CDC46_RS08325 PF00881 Nitroreductase family CDC46_RS08330 PF00768 D-alanyl-D-alanine carboxypeptidase CDC46_RS08335 PF01614 Bacterial transcriptional regulator CDC46_RS08335 PF09339 IclR helix-turn-helix domain CDC46_RS08340 PF02754 Cysteine-rich domain CDC46_RS08345 PF13183 4Fe-4S dicluster domain CDC46_RS08345 PF11870 Domain of unknown function (DUF3390) CDC46_RS08345 PF02589 LUD domain CDC46_RS08360 PF04377 Arginine-tRNA-protein transferase, C terminus CDC46_RS08360 PF04376 Arginine-tRNA-protein transferase, N terminus CDC46_RS08365 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CDC46_RS08385 PF01180 Dihydroorotate dehydrogenase CDC46_RS08395 PF02705 K+ potassium transporter CDC46_RS08405 PF17674 HHH domain CDC46_RS08405 PF00575 S1 RNA binding domain CDC46_RS08405 PF09371 Tex-like protein N-terminal domain CDC46_RS08405 PF16921 Tex protein YqgF-like domain CDC46_RS08420 PF04851 Type III restriction enzyme, res subunit CDC46_RS08420 PF13307 Helicase C-terminal domain CDC46_RS08425 PF13525 Outer membrane lipoprotein CDC46_RS08430 PF01479 S4 domain CDC46_RS08430 PF00849 RNA pseudouridylate synthase CDC46_RS08435 PF02578 Multi-copper polyphenol oxidoreductase laccase CDC46_RS08445 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CDC46_RS08450 PF00108 Thiolase, N-terminal domain CDC46_RS08450 PF02803 Thiolase, C-terminal domain CDC46_RS08455 PF00106 short chain dehydrogenase CDC46_RS08460 PF07879 PHB/PHA accumulation regulator DNA-binding domain CDC46_RS08460 PF05233 PHB accumulation regulatory domain CDC46_RS08465 PF01207 Dihydrouridine synthase (Dus) CDC46_RS08470 PF18693 TRAM domain CDC46_RS08470 PF00919 Uncharacterized protein family UPF0004 CDC46_RS08470 PF04055 Radical SAM superfamily CDC46_RS08475 PF00108 Thiolase, N-terminal domain CDC46_RS08475 PF02803 Thiolase, C-terminal domain CDC46_RS08485 PF01053 Cys/Met metabolism PLP-dependent enzyme CDC46_RS08495 PF07687 Peptidase dimerisation domain CDC46_RS08495 PF01546 Peptidase family M20/M25/M40 CDC46_RS08505 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDC46_RS08510 PF02542 YgbB family CDC46_RS08515 PF02627 Carboxymuconolactone decarboxylase family CDC46_RS08520 PF00578 AhpC/TSA family CDC46_RS08525 PF00672 HAMP domain CDC46_RS08525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS08525 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS08530 PF00072 Response regulator receiver domain CDC46_RS08530 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS08560 PF00873 AcrB/AcrD/AcrF family CDC46_RS08570 PF00589 Phage integrase family CDC46_RS08700 PF03354 Phage Terminase CDC46_RS08755 PF06791 Prophage tail length tape measure protein CDC46_RS08765 PF07484 Phage Tail Collar Domain CDC46_RS08835 PF05598 Transposase domain (DUF772) CDC46_RS08835 PF01609 Transposase DDE domain CDC46_RS08845 PF01476 LysM domain CDC46_RS08855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CDC46_RS08855 PF01266 FAD dependent oxidoreductase CDC46_RS08860 PF05697 Bacterial trigger factor protein (TF) CDC46_RS08860 PF05698 Bacterial trigger factor protein (TF) C-terminus CDC46_RS08860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDC46_RS08865 PF00574 Clp protease CDC46_RS08870 PF10431 C-terminal, D2-small domain, of ClpB protein CDC46_RS08870 PF06689 ClpX C4-type zinc finger CDC46_RS08870 PF07724 AAA domain (Cdc48 subfamily) CDC46_RS08875 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDC46_RS08875 PF05362 Lon protease (S16) C-terminal proteolytic domain CDC46_RS08875 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS08880 PF00216 Bacterial DNA-binding protein CDC46_RS08900 PF10502 Signal peptidase, peptidase S26 CDC46_RS08905 PF13472 GDSL-like Lipase/Acylhydrolase family CDC46_RS08910 PF00005 ABC transporter CDC46_RS08915 PF00342 Phosphoglucose isomerase CDC46_RS08920 PF01256 Carbohydrate kinase CDC46_RS08930 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CDC46_RS08930 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDC46_RS08930 PF02769 AIR synthase related protein, C-terminal domain CDC46_RS08950 PF04055 Radical SAM superfamily CDC46_RS08950 PF13186 Iron-sulfur cluster-binding domain CDC46_RS08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS08955 PF03466 LysR substrate binding domain CDC46_RS08965 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS08970 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS08980 PF08402 TOBE domain CDC46_RS08980 PF00005 ABC transporter CDC46_RS08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS08985 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS08985 PF08521 Two-component sensor kinase N-terminal CDC46_RS08990 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS08990 PF00072 Response regulator receiver domain CDC46_RS08995 PF13609 Gram-negative porin CDC46_RS09000 PF00005 ABC transporter CDC46_RS09025 PF00005 ABC transporter CDC46_RS09035 PF01722 BolA-like protein CDC46_RS09040 PF04279 Intracellular septation protein A CDC46_RS09045 PF01641 SelR domain CDC46_RS09050 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CDC46_RS09055 PF00501 AMP-binding enzyme CDC46_RS09055 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS09060 PF13458 Periplasmic binding protein CDC46_RS09065 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS09075 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS09075 PF00005 ABC transporter CDC46_RS09080 PF00005 ABC transporter CDC46_RS09090 PF00295 Glycosyl hydrolases family 28 CDC46_RS09095 PF00324 Amino acid permease CDC46_RS09100 PF00324 Amino acid permease CDC46_RS09105 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS09105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDC46_RS09105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDC46_RS09110 PF00857 Isochorismatase family CDC46_RS09115 PF00108 Thiolase, N-terminal domain CDC46_RS09115 PF02803 Thiolase, C-terminal domain CDC46_RS09120 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS09120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS09120 PF12806 Acetyl-CoA dehydrogenase C-terminal like CDC46_RS09120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS09135 PF00144 Beta-lactamase CDC46_RS09140 PF00107 Zinc-binding dehydrogenase CDC46_RS09140 PF16884 N-terminal domain of oxidoreductase CDC46_RS09145 PF00596 Class II Aldolase and Adducin N-terminal domain CDC46_RS09155 PF00106 short chain dehydrogenase CDC46_RS09160 PF00561 alpha/beta hydrolase fold CDC46_RS09165 PF00465 Iron-containing alcohol dehydrogenase CDC46_RS09170 PF07859 alpha/beta hydrolase fold CDC46_RS09185 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS09185 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CDC46_RS09185 PF13332 Hemagglutinin repeat CDC46_RS09185 PF05594 Haemagluttinin repeat CDC46_RS09185 PF05860 haemagglutination activity domain CDC46_RS09200 PF08479 POTRA domain, ShlB-type CDC46_RS09200 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CDC46_RS09200 PF17287 POTRA domain CDC46_RS09215 PF01571 Aminomethyltransferase folate-binding domain CDC46_RS09220 PF02618 YceG-like family CDC46_RS09225 PF02223 Thymidylate kinase CDC46_RS09230 PF09115 DNA polymerase III, delta subunit, C terminal CDC46_RS09240 PF01026 TatD related DNase CDC46_RS09250 PF12867 DinB superfamily CDC46_RS09250 PF03781 Sulfatase-modifying factor enzyme 1 CDC46_RS09255 PF00356 Bacterial regulatory proteins, lacI family CDC46_RS09260 PF01547 Bacterial extracellular solute-binding protein CDC46_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS09275 PF00005 ABC transporter CDC46_RS09275 PF12857 TOBE-like domain CDC46_RS09280 PF00149 Calcineurin-like phosphoesterase CDC46_RS09285 PF01510 N-acetylmuramoyl-L-alanine amidase CDC46_RS09290 PF00676 Dehydrogenase E1 component CDC46_RS09295 PF02780 Transketolase, C-terminal domain CDC46_RS09295 PF02779 Transketolase, pyrimidine binding domain CDC46_RS09300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDC46_RS09300 PF02817 e3 binding domain CDC46_RS09300 PF00364 Biotin-requiring enzyme CDC46_RS09315 PF01965 DJ-1/PfpI family CDC46_RS09320 PF00654 Voltage gated chloride channel CDC46_RS09325 PF08241 Methyltransferase domain CDC46_RS09340 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS09340 PF00593 TonB dependent receptor CDC46_RS09345 PF00005 ABC transporter CDC46_RS09345 PF00664 ABC transporter transmembrane region CDC46_RS09345 PF04954 Siderophore-interacting protein CDC46_RS09345 PF08021 Siderophore-interacting FAD-binding domain CDC46_RS09350 PF04954 Siderophore-interacting protein CDC46_RS09350 PF08021 Siderophore-interacting FAD-binding domain CDC46_RS09350 PF00664 ABC transporter transmembrane region CDC46_RS09350 PF00005 ABC transporter CDC46_RS09355 PF00698 Acyl transferase domain CDC46_RS09355 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS09355 PF00550 Phosphopantetheine attachment site CDC46_RS09355 PF16197 Ketoacyl-synthetase C-terminal extension CDC46_RS09355 PF00668 Condensation domain CDC46_RS09355 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS09360 PF08242 Methyltransferase domain CDC46_RS09360 PF00668 Condensation domain CDC46_RS09360 PF00501 AMP-binding enzyme CDC46_RS09360 PF00550 Phosphopantetheine attachment site CDC46_RS09370 PF02311 AraC-like ligand binding domain CDC46_RS09370 PF12833 Helix-turn-helix domain CDC46_RS09375 PF03377 TAL effector repeat CDC46_RS09380 PF00583 Acetyltransferase (GNAT) family CDC46_RS09385 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CDC46_RS09415 PF17645 Arylmalonate decarboxylase CDC46_RS09420 PF00795 Carbon-nitrogen hydrolase CDC46_RS09425 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDC46_RS09430 PF07883 Cupin domain CDC46_RS09435 PF01494 FAD binding domain CDC46_RS09460 PF14525 AraC-binding-like domain CDC46_RS09460 PF12833 Helix-turn-helix domain CDC46_RS09475 PF04199 Putative cyclase CDC46_RS09480 PF01613 Flavin reductase like domain CDC46_RS09485 PF17885 Styrene monooxygenase A putative substrate binding domain CDC46_RS09505 PF00155 Aminotransferase class I and II CDC46_RS09585 PF07690 Major Facilitator Superfamily CDC46_RS09590 PF13533 Biotin-lipoyl like CDC46_RS09595 PF02321 Outer membrane efflux protein CDC46_RS09610 PF00155 Aminotransferase class I and II CDC46_RS09610 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS09615 PF06481 COX Aromatic Rich Motif CDC46_RS09615 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDC46_RS09620 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS09625 PF00510 Cytochrome c oxidase subunit III CDC46_RS09680 PF13356 Arm DNA-binding domain CDC46_RS09680 PF00589 Phage integrase family CDC46_RS09690 PF00929 Exonuclease CDC46_RS09695 PF00551 Formyl transferase CDC46_RS09730 PF03466 LysR substrate binding domain CDC46_RS09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS09735 PF13454 FAD-NAD(P)-binding CDC46_RS09740 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS09745 PF12911 N-terminal TM domain of oligopeptide transport permease C CDC46_RS09745 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS09750 PF00005 ABC transporter CDC46_RS09750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC46_RS09755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC46_RS09755 PF00005 ABC transporter CDC46_RS09760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC46_RS09770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDC46_RS09775 PF01799 [2Fe-2S] binding domain CDC46_RS09775 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS09790 PF17158 Membrane-associated sensor, integral membrane domain CDC46_RS09790 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS09795 PF00672 HAMP domain CDC46_RS09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS09795 PF02203 Tar ligand binding domain homologue CDC46_RS09800 PF03472 Autoinducer binding domain CDC46_RS09800 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS09920 PF07484 Phage Tail Collar Domain CDC46_RS10025 PF06715 Gp5 C-terminal repeat (3 copies) CDC46_RS10025 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS10045 PF00474 Sodium:solute symporter family CDC46_RS10050 PF00501 AMP-binding enzyme CDC46_RS10050 PF16177 Acetyl-coenzyme A synthetase N-terminus CDC46_RS10050 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS10055 PF00892 EamA-like transporter family CDC46_RS10070 PF01177 Asp/Glu/Hydantoin racemase CDC46_RS10075 PF00375 Sodium:dicarboxylate symporter family CDC46_RS10095 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS10095 PF17862 AAA+ lid domain CDC46_RS10095 PF01434 Peptidase family M41 CDC46_RS10105 PF01618 MotA/TolQ/ExbB proton channel family CDC46_RS10110 PF02472 Biopolymer transport protein ExbD/TolR CDC46_RS10120 PF03928 Haem-degrading CDC46_RS10150 PF00005 ABC transporter CDC46_RS10155 PF01061 ABC-2 type transporter CDC46_RS10160 PF00156 Phosphoribosyl transferase domain CDC46_RS10175 PF08245 Mur ligase middle domain CDC46_RS10175 PF02875 Mur ligase family, glutamate ligase domain CDC46_RS10180 PF17848 Acetyl-coA carboxylase zinc finger domain CDC46_RS10180 PF01039 Carboxyl transferase domain CDC46_RS10185 PF00290 Tryptophan synthase alpha chain CDC46_RS10190 PF01555 DNA methylase CDC46_RS10195 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS10205 PF01416 tRNA pseudouridine synthase CDC46_RS10215 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDC46_RS10215 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDC46_RS10220 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC46_RS10225 PF00694 Aconitase C-terminal domain CDC46_RS10230 PF00330 Aconitase family (aconitate hydratase) CDC46_RS10235 PF00285 Citrate synthase, C-terminal domain CDC46_RS10240 PF03937 Flavinator of succinate dehydrogenase CDC46_RS10245 PF13085 2Fe-2S iron-sulfur cluster binding domain CDC46_RS10250 PF00890 FAD binding domain CDC46_RS10250 PF02910 Fumarate reductase flavoprotein C-term CDC46_RS10255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CDC46_RS10265 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS10265 PF00155 Aminotransferase class I and II CDC46_RS10270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDC46_RS10270 PF00056 lactate/malate dehydrogenase, NAD binding domain CDC46_RS10290 PF03972 MmgE/PrpD family CDC46_RS10295 PF00694 Aconitase C-terminal domain CDC46_RS10295 PF00330 Aconitase family (aconitate hydratase) CDC46_RS10310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC46_RS10320 PF18027 Cytosolic carboxypeptidase N-terminal domain CDC46_RS10320 PF00246 Zinc carboxypeptidase CDC46_RS10325 PF03883 Peroxide stress protein YaaA CDC46_RS10335 PF00155 Aminotransferase class I and II CDC46_RS10340 PF14497 Glutathione S-transferase, C-terminal domain CDC46_RS10340 PF13417 Glutathione S-transferase, N-terminal domain CDC46_RS10345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDC46_RS10345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDC46_RS10345 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CDC46_RS10350 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS10370 PF03466 LysR substrate binding domain CDC46_RS10380 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS10380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS10380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS10385 PF00043 Glutathione S-transferase, C-terminal domain CDC46_RS10385 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS10400 PF01810 LysE type translocator CDC46_RS10415 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC46_RS10420 PF01730 UreF CDC46_RS10425 PF02814 UreE urease accessory protein, N-terminal domain CDC46_RS10425 PF05194 UreE urease accessory protein, C-terminal domain CDC46_RS10435 PF00699 Urease beta subunit CDC46_RS10445 PF00547 Urease, gamma subunit CDC46_RS10450 PF01774 UreD urease accessory protein CDC46_RS10455 PF00005 ABC transporter CDC46_RS10460 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS10460 PF00005 ABC transporter CDC46_RS10465 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS10470 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS10480 PF01575 MaoC like domain CDC46_RS10485 PF00171 Aldehyde dehydrogenase family CDC46_RS10485 PF01575 MaoC like domain CDC46_RS10490 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS10490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS10490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS10495 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS10495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS10495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS10515 PF00361 Proton-conducting membrane transporter CDC46_RS10520 PF00361 Proton-conducting membrane transporter CDC46_RS10520 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CDC46_RS10525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDC46_RS10525 PF00361 Proton-conducting membrane transporter CDC46_RS10530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDC46_RS10535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CDC46_RS10540 PF12838 4Fe-4S dicluster domain CDC46_RS10545 PF00146 NADH dehydrogenase CDC46_RS10550 PF00384 Molybdopterin oxidoreductase CDC46_RS10550 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CDC46_RS10550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDC46_RS10555 PF10531 SLBB domain CDC46_RS10555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDC46_RS10555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDC46_RS10565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDC46_RS10570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDC46_RS10575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDC46_RS10580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CDC46_RS10590 PF03840 Preprotein translocase SecG subunit CDC46_RS10595 PF00121 Triosephosphate isomerase CDC46_RS10600 PF00107 Zinc-binding dehydrogenase CDC46_RS10600 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS10610 PF03725 3' exoribonuclease family, domain 2 CDC46_RS10610 PF01138 3' exoribonuclease family, domain 1 CDC46_RS10610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDC46_RS10610 PF00013 KH domain CDC46_RS10610 PF00575 S1 RNA binding domain CDC46_RS10615 PF00312 Ribosomal protein S15 CDC46_RS10620 PF13458 Periplasmic binding protein CDC46_RS10630 PF00682 HMGL-like CDC46_RS10630 PF08502 LeuA allosteric (dimerisation) domain CDC46_RS10635 PF01066 CDP-alcohol phosphatidyltransferase CDC46_RS10640 PF02666 Phosphatidylserine decarboxylase CDC46_RS10645 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDC46_RS10645 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDC46_RS10650 PF10369 Small subunit of acetolactate synthase CDC46_RS10655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC46_RS10655 PF00205 Thiamine pyrophosphate enzyme, central domain CDC46_RS10655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC46_RS10690 PF13439 Glycosyltransferase Family 4 CDC46_RS10690 PF00534 Glycosyl transferases group 1 CDC46_RS10695 PF01219 Prokaryotic diacylglycerol kinase CDC46_RS10700 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS10700 PF08359 YsiA-like protein, C-terminal region CDC46_RS10705 PF03641 Possible lysine decarboxylase CDC46_RS10735 PF12849 PBP superfamily domain CDC46_RS10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS10740 PF03466 LysR substrate binding domain CDC46_RS10745 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS10745 PF01799 [2Fe-2S] binding domain CDC46_RS10750 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDC46_RS10750 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDC46_RS10760 PF00962 Adenosine/AMP deaminase CDC46_RS10765 PF01979 Amidohydrolase family CDC46_RS10770 PF01169 Uncharacterized protein family UPF0016 CDC46_RS10790 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS10790 PF07729 FCD domain CDC46_RS10800 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS10805 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS10810 PF00005 ABC transporter CDC46_RS10820 PF13609 Gram-negative porin CDC46_RS10825 PF00892 EamA-like transporter family CDC46_RS10830 PF00171 Aldehyde dehydrogenase family CDC46_RS10835 PF00701 Dihydrodipicolinate synthetase family CDC46_RS10840 PF00083 Sugar (and other) transporter CDC46_RS10845 PF01266 FAD dependent oxidoreductase CDC46_RS10860 PF00576 HIUase/Transthyretin family CDC46_RS10870 PF00860 Permease family CDC46_RS10875 PF01979 Amidohydrolase family CDC46_RS10885 PF01014 Uricase CDC46_RS10885 PF09349 OHCU decarboxylase CDC46_RS10895 PF01515 Phosphate acetyl/butaryl transferase CDC46_RS10895 PF00390 Malic enzyme, N-terminal domain CDC46_RS10895 PF03949 Malic enzyme, NAD binding domain CDC46_RS10905 PF11940 Domain of unknown function (DUF3458) Ig-like fold CDC46_RS10905 PF01433 Peptidase family M1 domain CDC46_RS10905 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CDC46_RS10910 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CDC46_RS10920 PF00325 Bacterial regulatory proteins, crp family CDC46_RS10920 PF04198 Putative sugar-binding domain CDC46_RS10925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDC46_RS10925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDC46_RS10930 PF08125 Mannitol dehydrogenase C-terminal domain CDC46_RS10930 PF01232 Mannitol dehydrogenase Rossmann domain CDC46_RS10955 PF13609 Gram-negative porin CDC46_RS10960 PF00342 Phosphoglucose isomerase CDC46_RS10960 PF00342 Phosphoglucose isomerase CDC46_RS10965 PF01638 HxlR-like helix-turn-helix CDC46_RS10975 PF17912 MalK OB fold domain CDC46_RS10975 PF00005 ABC transporter CDC46_RS10980 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS10985 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS10990 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS11000 PF08013 Tagatose 6 phosphate kinase CDC46_RS11005 PF00294 pfkB family carbohydrate kinase CDC46_RS11015 PF01476 LysM domain CDC46_RS11015 PF04972 BON domain CDC46_RS11035 PF03449 Transcription elongation factor, N-terminal CDC46_RS11035 PF01272 Transcription elongation factor, GreA/GreB, C-term CDC46_RS11045 PF04607 Region found in RelA / SpoT proteins CDC46_RS11045 PF13291 ACT domain CDC46_RS11045 PF02824 TGS domain CDC46_RS11050 PF01192 RNA polymerase Rpb6 CDC46_RS11055 PF00625 Guanylate kinase CDC46_RS11060 PF08340 Domain of unknown function (DUF1732) CDC46_RS11060 PF03755 YicC-like family, N-terminal region CDC46_RS11065 PF00069 Protein kinase domain CDC46_RS11065 PF08239 Bacterial SH3 domain CDC46_RS11075 PF01138 3' exoribonuclease family, domain 1 CDC46_RS11075 PF03725 3' exoribonuclease family, domain 2 CDC46_RS11080 PF01725 Ham1 family CDC46_RS11085 PF06969 HemN C-terminal domain CDC46_RS11085 PF04055 Radical SAM superfamily CDC46_RS11095 PF12706 Beta-lactamase superfamily domain CDC46_RS11110 PF01470 Pyroglutamyl peptidase CDC46_RS11115 PF03480 Bacterial extracellular solute-binding protein, family 7 CDC46_RS11130 PF03746 LamB/YcsF family CDC46_RS11135 PF02626 Carboxyltransferase domain, subdomain A and B CDC46_RS11140 PF02682 Carboxyltransferase domain, subdomain C and D CDC46_RS11145 PF07690 Major Facilitator Superfamily CDC46_RS11150 PF00005 ABC transporter CDC46_RS11155 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS11170 PF02608 ABC transporter substrate-binding protein PnrA-like CDC46_RS11205 PF00107 Zinc-binding dehydrogenase CDC46_RS11205 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS11210 PF02142 MGS-like domain CDC46_RS11230 PF05872 Bacterial protein of unknown function (DUF853) CDC46_RS11235 PF01709 Transcriptional regulator CDC46_RS11240 PF02844 Phosphoribosylglycinamide synthetase, N domain CDC46_RS11240 PF02843 Phosphoribosylglycinamide synthetase, C domain CDC46_RS11240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDC46_RS11245 PF01218 Coproporphyrinogen III oxidase CDC46_RS11250 PF01467 Cytidylyltransferase-like CDC46_RS11260 PF02590 Predicted SPOUT methyltransferase CDC46_RS11265 PF10150 Ribonuclease E/G family CDC46_RS11265 PF00575 S1 RNA binding domain CDC46_RS11280 PF00664 ABC transporter transmembrane region CDC46_RS11280 PF00005 ABC transporter CDC46_RS11290 PF00535 Glycosyl transferase family 2 CDC46_RS11305 PF01336 OB-fold nucleic acid binding domain CDC46_RS11305 PF14579 Helix-hairpin-helix motif CDC46_RS11305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDC46_RS11305 PF02811 PHP domain CDC46_RS11305 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDC46_RS11310 PF17773 UPF0176 acylphosphatase like domain CDC46_RS11315 PF03358 NADPH-dependent FMN reductase CDC46_RS11320 PF17954 Quercetinase C-terminal cupin domain CDC46_RS11320 PF02678 Pirin CDC46_RS11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS11325 PF03466 LysR substrate binding domain CDC46_RS11330 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDC46_RS11335 PF00270 DEAD/DEAH box helicase CDC46_RS11335 PF00271 Helicase conserved C-terminal domain CDC46_RS11340 PF00258 Flavodoxin CDC46_RS11340 PF01613 Flavin reductase like domain CDC46_RS11350 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDC46_RS11350 PF10996 Beta-Casp domain CDC46_RS11350 PF00753 Metallo-beta-lactamase superfamily CDC46_RS11360 PF04545 Sigma-70, region 4 CDC46_RS11360 PF04539 Sigma-70 region 3 CDC46_RS11360 PF04546 Sigma-70, non-essential region CDC46_RS11360 PF03979 Sigma-70 factor, region 1.1 CDC46_RS11360 PF00140 Sigma-70 factor, region 1.2 CDC46_RS11360 PF04542 Sigma-70 region 2 CDC46_RS11365 PF08275 DNA primase catalytic core, N-terminal domain CDC46_RS11365 PF08278 DNA primase DnaG DnaB-binding CDC46_RS11365 PF01807 CHC2 zinc finger CDC46_RS11365 PF10410 DnaB-helicase binding domain of primase CDC46_RS11370 PF09424 Yqey-like protein CDC46_RS11380 PF00814 Glycoprotease family CDC46_RS11385 PF02649 Type I GTP cyclohydrolase folE2 CDC46_RS11390 PF02779 Transketolase, pyrimidine binding domain CDC46_RS11390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDC46_RS11390 PF02780 Transketolase, C-terminal domain CDC46_RS11395 PF00348 Polyprenyl synthetase CDC46_RS11400 PF02609 Exonuclease VII small subunit CDC46_RS11415 PF00581 Rhodanese-like domain CDC46_RS11425 PF01738 Dienelactone hydrolase family CDC46_RS11430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS11435 PF01367 5'-3' exonuclease, C-terminal SAM fold CDC46_RS11435 PF00476 DNA polymerase family A CDC46_RS11435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDC46_RS11435 PF01612 3'-5' exonuclease CDC46_RS11440 PF03641 Possible lysine decarboxylase CDC46_RS11450 PF01636 Phosphotransferase enzyme family CDC46_RS11460 PF00580 UvrD/REP helicase N-terminal domain CDC46_RS11460 PF13361 UvrD-like helicase C-terminal domain CDC46_RS11465 PF10458 Valyl tRNA synthetase tRNA binding arm CDC46_RS11465 PF00133 tRNA synthetases class I (I, L, M and V) CDC46_RS11465 PF08264 Anticodon-binding domain of tRNA CDC46_RS11470 PF00483 Nucleotidyl transferase CDC46_RS11480 PF01176 Translation initiation factor 1A / IF-1 CDC46_RS11490 PF03537 Glycoside-hydrolase family GH114 CDC46_RS11495 PF01494 FAD binding domain CDC46_RS11500 PF03466 LysR substrate binding domain CDC46_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS11505 PF13458 Periplasmic binding protein CDC46_RS11510 PF00005 ABC transporter CDC46_RS11515 PF00005 ABC transporter CDC46_RS11515 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS11530 PF02627 Carboxymuconolactone decarboxylase family CDC46_RS11535 PF12146 Serine aminopeptidase, S33 CDC46_RS11540 PF10397 Adenylosuccinate lyase C-terminus CDC46_RS11540 PF00206 Lyase CDC46_RS11545 PF00108 Thiolase, N-terminal domain CDC46_RS11545 PF02803 Thiolase, C-terminal domain CDC46_RS11550 PF01144 Coenzyme A transferase CDC46_RS11555 PF01144 Coenzyme A transferase CDC46_RS11560 PF01614 Bacterial transcriptional regulator CDC46_RS11560 PF09339 IclR helix-turn-helix domain CDC46_RS11570 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS11580 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS11585 PF00005 ABC transporter CDC46_RS11590 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS11595 PF01266 FAD dependent oxidoreductase CDC46_RS11660 PF01595 Cyclin M transmembrane N-terminal domain CDC46_RS11660 PF03471 Transporter associated domain CDC46_RS11660 PF00571 CBS domain CDC46_RS11700 PF06629 MltA-interacting protein MipA CDC46_RS11705 PF06903 VirK protein CDC46_RS11715 PF00578 AhpC/TSA family CDC46_RS11735 PF01464 Transglycosylase SLT domain CDC46_RS11770 PF07732 Multicopper oxidase CDC46_RS11770 PF00394 Multicopper oxidase CDC46_RS11785 PF08334 Type II secretion system (T2SS), protein G CDC46_RS11785 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS11795 PF00263 Bacterial type II and III secretion system protein CDC46_RS11795 PF03958 Bacterial type II/III secretion system short domain CDC46_RS11820 PF00437 Type II/IV secretion system protein CDC46_RS11825 PF00482 Type II secretion system (T2SS), protein F CDC46_RS11830 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS11830 PF08334 Type II secretion system (T2SS), protein G CDC46_RS11835 PF07730 Histidine kinase CDC46_RS11835 PF17200 Single Cache domain 2 CDC46_RS11840 PF00072 Response regulator receiver domain CDC46_RS11840 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS11855 PF07690 Major Facilitator Superfamily CDC46_RS11865 PF01037 Lrp/AsnC ligand binding domain CDC46_RS11875 PF01037 Lrp/AsnC ligand binding domain CDC46_RS11875 PF13404 AsnC-type helix-turn-helix domain CDC46_RS11880 PF00106 short chain dehydrogenase CDC46_RS11885 PF13411 MerR HTH family regulatory protein CDC46_RS11895 PF07690 Major Facilitator Superfamily CDC46_RS11900 PF01047 MarR family CDC46_RS11910 PF01381 Helix-turn-helix CDC46_RS11915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS11915 PF03466 LysR substrate binding domain CDC46_RS11925 PF02525 Flavodoxin-like fold CDC46_RS11940 PF02796 Helix-turn-helix domain of resolvase CDC46_RS11940 PF00665 Integrase core domain CDC46_RS11945 PF01695 IstB-like ATP binding protein CDC46_RS11965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDC46_RS11965 PF02403 Seryl-tRNA synthetase N-terminal domain CDC46_RS11970 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS11970 PF12002 MgsA AAA+ ATPase C terminal CDC46_RS11970 PF16193 AAA C-terminal domain CDC46_RS11980 PF03548 Outer membrane lipoprotein carrier protein LolA CDC46_RS11985 PF01580 FtsK/SpoIIIE family CDC46_RS11985 PF09397 Ftsk gamma domain CDC46_RS11985 PF17854 FtsK alpha domain CDC46_RS11985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CDC46_RS12000 PF03458 UPF0126 domain CDC46_RS12005 PF00543 Nitrogen regulatory protein P-II CDC46_RS12010 PF01209 ubiE/COQ5 methyltransferase family CDC46_RS12015 PF02540 NAD synthase CDC46_RS12015 PF00795 Carbon-nitrogen hydrolase CDC46_RS12030 PF00719 Inorganic pyrophosphatase CDC46_RS12035 PF00171 Aldehyde dehydrogenase family CDC46_RS12045 PF07690 Major Facilitator Superfamily CDC46_RS12065 PF02602 Uroporphyrinogen-III synthase HemD CDC46_RS12070 PF03900 Porphobilinogen deaminase, C-terminal domain CDC46_RS12070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDC46_RS12075 PF00311 Phosphoenolpyruvate carboxylase CDC46_RS12090 PF08281 Sigma-70, region 4 CDC46_RS12090 PF04542 Sigma-70 region 2 CDC46_RS12100 PF14698 Argininosuccinate lyase C-terminal CDC46_RS12100 PF00206 Lyase CDC46_RS12110 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CDC46_RS12110 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDC46_RS12110 PF01276 Orn/Lys/Arg decarboxylase, major domain CDC46_RS12115 PF00692 dUTPase CDC46_RS12120 PF02634 FdhD/NarQ family CDC46_RS12125 PF00080 Copper/zinc superoxide dismutase (SODC) CDC46_RS12145 PF13247 4Fe-4S dicluster domain CDC46_RS12150 PF00384 Molybdopterin oxidoreductase CDC46_RS12150 PF01568 Molydopterin dinucleotide binding domain CDC46_RS12150 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDC46_RS12180 PF10609 NUBPL iron-transfer P-loop NTPase CDC46_RS12185 PF05736 OprF membrane domain CDC46_RS12185 PF00691 OmpA family CDC46_RS12190 PF09334 tRNA synthetases class I (M) CDC46_RS12190 PF01588 Putative tRNA binding domain CDC46_RS12200 PF04357 TamB, inner membrane protein subunit of TAM complex CDC46_RS12215 PF02616 Segregation and condensation protein ScpA CDC46_RS12220 PF02569 Pantoate-beta-alanine ligase CDC46_RS12235 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDC46_RS12235 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDC46_RS12240 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDC46_RS12245 PF17113 Regulatory signalling modulator protein AmpE CDC46_RS12245 PF03186 CobD/Cbib protein CDC46_RS12250 PF00155 Aminotransferase class I and II CDC46_RS12255 PF01497 Periplasmic binding protein CDC46_RS12265 PF02654 Cobalamin-5-phosphate synthase CDC46_RS12270 PF02277 Phosphoribosyltransferase CDC46_RS12280 PF00005 ABC transporter CDC46_RS12285 PF01032 FecCD transport family CDC46_RS12290 PF00593 TonB dependent receptor CDC46_RS12290 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS12330 PF01790 Prolipoprotein diacylglyceryl transferase CDC46_RS12335 PF03466 LysR substrate binding domain CDC46_RS12335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS12340 PF00920 Dehydratase family CDC46_RS12350 PF04364 DNA polymerase III chi subunit, HolC CDC46_RS12355 PF00883 Cytosol aminopeptidase family, catalytic domain CDC46_RS12355 PF02789 Cytosol aminopeptidase family, N-terminal domain CDC46_RS12380 PF10414 Sirohaem synthase dimerisation region CDC46_RS12380 PF14824 Sirohaem biosynthesis protein central CDC46_RS12380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS12385 PF00009 Elongation factor Tu GTP binding domain CDC46_RS12390 PF01507 Phosphoadenosine phosphosulfate reductase family CDC46_RS12395 PF01507 Phosphoadenosine phosphosulfate reductase family CDC46_RS12405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC46_RS12405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDC46_RS12410 PF01925 Sulfite exporter TauE/SafE CDC46_RS12415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS12415 PF03466 LysR substrate binding domain CDC46_RS12425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDC46_RS12425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDC46_RS12445 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS12445 PF00072 Response regulator receiver domain CDC46_RS12455 PF00970 Oxidoreductase FAD-binding domain CDC46_RS12455 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS12455 PF00175 Oxidoreductase NAD-binding domain CDC46_RS12460 PF00202 Aminotransferase class-III CDC46_RS12470 PF00005 ABC transporter CDC46_RS12475 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS12475 PF00005 ABC transporter CDC46_RS12480 PF11862 Domain of unknown function (DUF3382) CDC46_RS12480 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS12485 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS12490 PF13458 Periplasmic binding protein CDC46_RS12495 PF02401 LytB protein CDC46_RS12500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDC46_RS12505 PF04002 RadC-like JAB domain CDC46_RS12510 PF00830 Ribosomal L28 family CDC46_RS12515 PF00471 Ribosomal protein L33 CDC46_RS12520 PF02910 Fumarate reductase flavoprotein C-term CDC46_RS12520 PF00890 FAD binding domain CDC46_RS12525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDC46_RS12525 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDC46_RS12530 PF02445 Quinolinate synthetase A protein CDC46_RS12540 PF00924 Mechanosensitive ion channel CDC46_RS12540 PF12795 Mechanosensitive ion channel porin domain CDC46_RS12540 PF12794 Mechanosensitive ion channel inner membrane domain 1 CDC46_RS12545 PF13091 PLD-like domain CDC46_RS12550 PF01029 NusB family CDC46_RS12550 PF01189 16S rRNA methyltransferase RsmB/F CDC46_RS12555 PF00551 Formyl transferase CDC46_RS12560 PF00072 Response regulator receiver domain CDC46_RS12560 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS12565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS12565 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS12565 PF09308 LuxQ, periplasmic CDC46_RS12565 PF00072 Response regulator receiver domain CDC46_RS12570 PF06574 FAD synthetase CDC46_RS12570 PF01687 Riboflavin kinase CDC46_RS12575 PF00133 tRNA synthetases class I (I, L, M and V) CDC46_RS12575 PF08264 Anticodon-binding domain of tRNA CDC46_RS12575 PF06827 Zinc finger found in FPG and IleRS CDC46_RS12580 PF01252 Signal peptidase (SPase) II CDC46_RS12590 PF04127 DNA / pantothenate metabolism flavoprotein CDC46_RS12590 PF02441 Flavoprotein CDC46_RS12595 PF00296 Luciferase-like monooxygenase CDC46_RS12600 PF00692 dUTPase CDC46_RS12605 PF07724 AAA domain (Cdc48 subfamily) CDC46_RS12605 PF02861 Clp amino terminal domain, pathogenicity island component CDC46_RS12605 PF10431 C-terminal, D2-small domain, of ClpB protein CDC46_RS12605 PF17871 AAA lid domain CDC46_RS12605 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS12610 PF02617 ATP-dependent Clp protease adaptor protein ClpS CDC46_RS12615 PF00313 'Cold-shock' DNA-binding domain CDC46_RS12690 PF12307 Protein of unknown function (DUF3631) CDC46_RS12725 PF13356 Arm DNA-binding domain CDC46_RS12725 PF00589 Phage integrase family CDC46_RS12725 PF14659 Phage integrase, N-terminal SAM-like domain CDC46_RS12730 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC46_RS12745 PF03150 Di-haem cytochrome c peroxidase CDC46_RS12755 PF12706 Beta-lactamase superfamily domain CDC46_RS12760 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CDC46_RS12765 PF03466 LysR substrate binding domain CDC46_RS12765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS12770 PF03466 LysR substrate binding domain CDC46_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS12775 PF07690 Major Facilitator Superfamily CDC46_RS12780 PF07681 DoxX CDC46_RS12795 PF04228 Putative neutral zinc metallopeptidase CDC46_RS12805 PF02805 Metal binding domain of Ada CDC46_RS12805 PF12833 Helix-turn-helix domain CDC46_RS12805 PF00730 HhH-GPD superfamily base excision DNA repair protein CDC46_RS12805 PF06029 AlkA N-terminal domain CDC46_RS12810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDC46_RS12810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDC46_RS12835 PF07687 Peptidase dimerisation domain CDC46_RS12835 PF01546 Peptidase family M20/M25/M40 CDC46_RS12840 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS12855 PF11871 Domain of unknown function (DUF3391) CDC46_RS12855 PF01966 HD domain CDC46_RS12860 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS12885 PF00216 Bacterial DNA-binding protein CDC46_RS12900 PF02163 Peptidase family M50 CDC46_RS12900 PF00571 CBS domain CDC46_RS12915 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDC46_RS12915 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDC46_RS12920 PF13742 OB-fold nucleic acid binding domain CDC46_RS12920 PF02601 Exonuclease VII, large subunit CDC46_RS12925 PF01618 MotA/TolQ/ExbB proton channel family CDC46_RS12930 PF02472 Biopolymer transport protein ExbD/TolR CDC46_RS12935 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDC46_RS12940 PF03966 Trm112p-like protein CDC46_RS12945 PF02348 Cytidylyltransferase CDC46_RS12950 PF05191 Adenylate kinase, active site lid CDC46_RS12955 PF00106 short chain dehydrogenase CDC46_RS12960 PF03466 LysR substrate binding domain CDC46_RS12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS12965 PF00171 Aldehyde dehydrogenase family CDC46_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS12970 PF03466 LysR substrate binding domain CDC46_RS12975 PF13593 SBF-like CPA transporter family (DUF4137) CDC46_RS12980 PF11741 AMIN domain CDC46_RS12980 PF01520 N-acetylmuramoyl-L-alanine amidase CDC46_RS12985 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDC46_RS12990 PF08331 Domain of unknown function (DUF1730) CDC46_RS13000 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDC46_RS13000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDC46_RS13005 PF02899 Phage integrase, N-terminal SAM-like domain CDC46_RS13005 PF00589 Phage integrase family CDC46_RS13010 PF04073 Aminoacyl-tRNA editing domain CDC46_RS13015 PF02660 Glycerol-3-phosphate acyltransferase CDC46_RS13020 PF01804 Penicillin amidase CDC46_RS13025 PF01156 Inosine-uridine preferring nucleoside hydrolase CDC46_RS13030 PF04461 Protein of unknown function (DUF520) CDC46_RS13035 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDC46_RS13035 PF01565 FAD binding domain CDC46_RS13045 PF06865 Pyrimidine/purine nucleoside phosphorylase CDC46_RS13050 PF00764 Arginosuccinate synthase CDC46_RS13055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDC46_RS13055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDC46_RS13065 PF01649 Ribosomal protein S20 CDC46_RS13070 PF03023 Lipid II flippase MurJ CDC46_RS13075 PF13369 Transglutaminase-like superfamily CDC46_RS13080 PF09335 SNARE associated Golgi protein CDC46_RS13095 PF02470 MlaD protein CDC46_RS13100 PF01119 DNA mismatch repair protein, C-terminal domain CDC46_RS13100 PF08676 MutL C terminal dimerisation domain CDC46_RS13115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDC46_RS13115 PF02805 Metal binding domain of Ada CDC46_RS13115 PF12833 Helix-turn-helix domain CDC46_RS13115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDC46_RS13120 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CDC46_RS13125 PF13532 2OG-Fe(II) oxygenase superfamily CDC46_RS13135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDC46_RS13135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDC46_RS13135 PF12833 Helix-turn-helix domain CDC46_RS13135 PF02805 Metal binding domain of Ada CDC46_RS13150 PF01610 Transposase CDC46_RS13150 PF13542 Helix-turn-helix domain of transposase family ISL3 CDC46_RS13150 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CDC46_RS13160 PF03743 Bacterial conjugation TrbI-like protein CDC46_RS13165 PF03524 Conjugal transfer protein CDC46_RS13190 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CDC46_RS13200 PF04956 TrbC/VIRB2 family CDC46_RS13205 PF00437 Type II/IV secretion system protein CDC46_RS13215 PF02534 Type IV secretory system Conjugative DNA transfer CDC46_RS13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS13225 PF03466 LysR substrate binding domain CDC46_RS13240 PF06719 AraC-type transcriptional regulator N-terminus CDC46_RS13240 PF12833 Helix-turn-helix domain CDC46_RS13245 PF04237 YjbR CDC46_RS13250 PF00135 Carboxylesterase family CDC46_RS13255 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS13265 PF00857 Isochorismatase family CDC46_RS13275 PF12833 Helix-turn-helix domain CDC46_RS13275 PF06719 AraC-type transcriptional regulator N-terminus CDC46_RS13280 PF08494 DEAD/H associated CDC46_RS13280 PF00271 Helicase conserved C-terminal domain CDC46_RS13280 PF00270 DEAD/DEAH box helicase CDC46_RS13300 PF10502 Signal peptidase, peptidase S26 CDC46_RS13315 PF13614 AAA domain CDC46_RS13360 PF05284 Protein of unknown function (DUF736) CDC46_RS13395 PF06067 Domain of unknown function (DUF932) CDC46_RS13405 PF04002 RadC-like JAB domain CDC46_RS13410 PF06250 YhcG PDDEXK nuclease domain CDC46_RS13410 PF17761 DUF1016 N-terminal domain CDC46_RS13420 PF00586 AIR synthase related protein, N-terminal domain CDC46_RS13420 PF02769 AIR synthase related protein, C-terminal domain CDC46_RS13425 PF01594 AI-2E family transporter CDC46_RS13430 PF00308 Bacterial dnaA protein CDC46_RS13440 PF12627 Probable RNA and SrmB- binding site of polymerase A CDC46_RS13440 PF01743 Poly A polymerase head domain CDC46_RS13440 PF12626 Polymerase A arginine-rich C-terminus CDC46_RS13445 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDC46_RS13455 PF02548 Ketopantoate hydroxymethyltransferase CDC46_RS13460 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS13465 PF08402 TOBE domain CDC46_RS13465 PF00005 ABC transporter CDC46_RS13470 PF04715 Anthranilate synthase component I, N terminal region CDC46_RS13470 PF00117 Glutamine amidotransferase class-I CDC46_RS13470 PF00425 chorismate binding enzyme CDC46_RS13475 PF00684 DnaJ central domain CDC46_RS13475 PF01556 DnaJ C terminal domain CDC46_RS13475 PF00226 DnaJ domain CDC46_RS13480 PF00012 Hsp70 protein CDC46_RS13485 PF14760 Rnk N-terminus CDC46_RS13485 PF01272 Transcription elongation factor, GreA/GreB, C-term CDC46_RS13495 PF01025 GrpE CDC46_RS13510 PF01479 S4 domain CDC46_RS13515 PF00762 Ferrochelatase CDC46_RS13520 PF01979 Amidohydrolase family CDC46_RS13525 PF00491 Arginase family CDC46_RS13530 PF00221 Aromatic amino acid lyase CDC46_RS13535 PF17391 Urocanase N-terminal domain CDC46_RS13535 PF01175 Urocanase Rossmann-like domain CDC46_RS13535 PF17392 Urocanase C-terminal domain CDC46_RS13540 PF07702 UTRA domain CDC46_RS13540 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS13545 PF01628 HrcA protein C terminal domain CDC46_RS13550 PF01513 ATP-NAD kinase CDC46_RS13555 PF02463 RecF/RecN/SMC N terminal domain CDC46_RS13565 PF00082 Subtilase family CDC46_RS13565 PF04151 Bacterial pre-peptidase C-terminal domain CDC46_RS13570 PF00082 Subtilase family CDC46_RS13570 PF01483 Proprotein convertase P-domain CDC46_RS13580 PF03710 Glutamate-ammonia ligase adenylyltransferase CDC46_RS13580 PF08335 GlnD PII-uridylyltransferase CDC46_RS13590 PF00795 Carbon-nitrogen hydrolase CDC46_RS13595 PF01523 Putative modulator of DNA gyrase CDC46_RS13600 PF00793 DAHP synthetase I family CDC46_RS13610 PF05552 Conserved TM helix CDC46_RS13610 PF00924 Mechanosensitive ion channel CDC46_RS13615 PF01923 Cobalamin adenosyltransferase CDC46_RS13620 PF02913 FAD linked oxidases, C-terminal domain CDC46_RS13620 PF01565 FAD binding domain CDC46_RS13625 PF03466 LysR substrate binding domain CDC46_RS13625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS13630 PF01565 FAD binding domain CDC46_RS13630 PF02913 FAD linked oxidases, C-terminal domain CDC46_RS13635 PF01565 FAD binding domain CDC46_RS13640 PF13183 4Fe-4S dicluster domain CDC46_RS13640 PF02754 Cysteine-rich domain CDC46_RS13645 PF03788 LrgA family CDC46_RS13650 PF04172 LrgB-like family CDC46_RS13660 PF07883 Cupin domain CDC46_RS13670 PF00255 Glutathione peroxidase CDC46_RS13705 PF00437 Type II/IV secretion system protein CDC46_RS13710 PF00437 Type II/IV secretion system protein CDC46_RS13715 PF01168 Alanine racemase, N-terminal domain CDC46_RS13720 PF03807 NADP oxidoreductase coenzyme F420-dependent CDC46_RS13720 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDC46_RS13730 PF01040 UbiA prenyltransferase family CDC46_RS13735 PF00210 Ferritin-like domain CDC46_RS13750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS13750 PF03466 LysR substrate binding domain CDC46_RS13825 PF00313 'Cold-shock' DNA-binding domain CDC46_RS13860 PF01168 Alanine racemase, N-terminal domain CDC46_RS13860 PF14031 Putative serine dehydratase domain CDC46_RS13875 PF00270 DEAD/DEAH box helicase CDC46_RS13875 PF00271 Helicase conserved C-terminal domain CDC46_RS13875 PF17191 RecG wedge domain CDC46_RS13880 PF02547 Queuosine biosynthesis protein CDC46_RS13885 PF01702 Queuine tRNA-ribosyltransferase CDC46_RS13890 PF02699 Preprotein translocase subunit CDC46_RS13895 PF02355 Protein export membrane protein CDC46_RS13895 PF13721 SecD export protein N-terminal TM region CDC46_RS13895 PF07549 SecD/SecF GG Motif CDC46_RS13900 PF07549 SecD/SecF GG Motif CDC46_RS13900 PF02355 Protein export membrane protein CDC46_RS13905 PF04264 YceI-like domain CDC46_RS13910 PF04264 YceI-like domain CDC46_RS13915 PF01292 Prokaryotic cytochrome b561 CDC46_RS13920 PF00206 Lyase CDC46_RS13920 PF08328 Adenylosuccinate lyase C-terminal CDC46_RS13925 PF00043 Glutathione S-transferase, C-terminal domain CDC46_RS13925 PF13417 Glutathione S-transferase, N-terminal domain CDC46_RS13930 PF01645 Conserved region in glutamate synthase CDC46_RS13940 PF00293 NUDIX domain CDC46_RS13950 PF13533 Biotin-lipoyl like CDC46_RS13955 PF07690 Major Facilitator Superfamily CDC46_RS13970 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDC46_RS13970 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDC46_RS13975 PF02261 Aspartate decarboxylase CDC46_RS13980 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CDC46_RS13985 PF02233 NAD(P) transhydrogenase beta subunit CDC46_RS13990 PF00072 Response regulator receiver domain CDC46_RS14000 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS14005 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS14005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS14005 PF00989 PAS fold CDC46_RS14010 PF02954 Bacterial regulatory protein, Fis family CDC46_RS14010 PF00072 Response regulator receiver domain CDC46_RS14010 PF00158 Sigma-54 interaction domain CDC46_RS14015 PF01170 Putative RNA methylase family UPF0020 CDC46_RS14015 PF02926 THUMP domain CDC46_RS14020 PF03653 Uncharacterised protein family (UPF0093) CDC46_RS14025 PF00171 Aldehyde dehydrogenase family CDC46_RS14030 PF06144 DNA polymerase III, delta subunit CDC46_RS14030 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CDC46_RS14040 PF13603 Leucyl-tRNA synthetase, Domain 2 CDC46_RS14040 PF00133 tRNA synthetases class I (I, L, M and V) CDC46_RS14040 PF08264 Anticodon-binding domain of tRNA CDC46_RS14040 PF09334 tRNA synthetases class I (M) CDC46_RS14045 PF05173 Dihydrodipicolinate reductase, C-terminus CDC46_RS14045 PF01113 Dihydrodipicolinate reductase, N-terminus CDC46_RS14050 PF04355 SmpA / OmlA family CDC46_RS14055 PF01475 Ferric uptake regulator family CDC46_RS14060 PF03466 LysR substrate binding domain CDC46_RS14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS14065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDC46_RS14065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDC46_RS14070 PF00456 Transketolase, thiamine diphosphate binding domain CDC46_RS14070 PF02780 Transketolase, C-terminal domain CDC46_RS14070 PF02779 Transketolase, pyrimidine binding domain CDC46_RS14075 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDC46_RS14075 PF13378 Enolase C-terminal domain-like CDC46_RS14080 PF01081 KDPG and KHG aldolase CDC46_RS14095 PF08450 SMP-30/Gluconolactonase/LRE-like region CDC46_RS14100 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS14105 PF00005 ABC transporter CDC46_RS14110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CDC46_RS14120 PF13609 Gram-negative porin CDC46_RS14125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS14125 PF03466 LysR substrate binding domain CDC46_RS14135 PF04452 RNA methyltransferase CDC46_RS14155 PF01515 Phosphate acetyl/butaryl transferase CDC46_RS14155 PF03949 Malic enzyme, NAD binding domain CDC46_RS14155 PF00390 Malic enzyme, N-terminal domain CDC46_RS14160 PF00586 AIR synthase related protein, N-terminal domain CDC46_RS14160 PF02769 AIR synthase related protein, C-terminal domain CDC46_RS14165 PF04608 Phosphatidylglycerophosphatase A CDC46_RS14170 PF00994 Probable molybdopterin binding domain CDC46_RS14170 PF18146 Damage-inducible protein CinA KH domain CDC46_RS14170 PF02464 Competence-damaged protein CDC46_RS14180 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDC46_RS14185 PF01544 CorA-like Mg2+ transporter protein CDC46_RS14195 PF00912 Transglycosylase CDC46_RS14200 PF08501 Shikimate dehydrogenase substrate binding domain CDC46_RS14200 PF01488 Shikimate / quinate 5-dehydrogenase CDC46_RS14200 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDC46_RS14210 PF00773 RNB domain CDC46_RS14215 PF04345 Chorismate lyase CDC46_RS14220 PF05728 Uncharacterised protein family (UPF0227) CDC46_RS14225 PF08245 Mur ligase middle domain CDC46_RS14225 PF02875 Mur ligase family, glutamate ligase domain CDC46_RS14225 PF01225 Mur ligase family, catalytic domain CDC46_RS14235 PF00085 Thioredoxin CDC46_RS14240 PF01220 Dehydroquinase class II CDC46_RS14245 PF00364 Biotin-requiring enzyme CDC46_RS14250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDC46_RS14250 PF00289 Biotin carboxylase, N-terminal domain CDC46_RS14250 PF02785 Biotin carboxylase C-terminal domain CDC46_RS14265 PF08534 Redoxin CDC46_RS14270 PF00294 pfkB family carbohydrate kinase CDC46_RS14315 PF00672 HAMP domain CDC46_RS14315 PF02203 Tar ligand binding domain homologue CDC46_RS14315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS14325 PF01037 Lrp/AsnC ligand binding domain CDC46_RS14340 PF00268 Ribonucleotide reductase, small chain CDC46_RS14345 PF00317 Ribonucleotide reductase, all-alpha domain CDC46_RS14345 PF02867 Ribonucleotide reductase, barrel domain CDC46_RS14345 PF03477 ATP cone domain CDC46_RS14350 PF01510 N-acetylmuramoyl-L-alanine amidase CDC46_RS14355 PF00072 Response regulator receiver domain CDC46_RS14355 PF00158 Sigma-54 interaction domain CDC46_RS14355 PF02954 Bacterial regulatory protein, Fis family CDC46_RS14360 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS14360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS14370 PF01578 Cytochrome C assembly protein CDC46_RS14375 PF00448 SRP54-type protein, GTPase domain CDC46_RS14375 PF02978 Signal peptide binding domain CDC46_RS14375 PF02881 SRP54-type protein, helical bundle domain CDC46_RS14380 PF00156 Phosphoribosyl transferase domain CDC46_RS14385 PF01914 MarC family integral membrane protein CDC46_RS14395 PF01464 Transglycosylase SLT domain CDC46_RS14400 PF04073 Aminoacyl-tRNA editing domain CDC46_RS14400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDC46_RS14400 PF03129 Anticodon binding domain CDC46_RS14405 PF00293 NUDIX domain CDC46_RS14415 PF01472 PUA domain CDC46_RS14415 PF00696 Amino acid kinase family CDC46_RS14420 PF01018 GTP1/OBG CDC46_RS14420 PF01926 50S ribosome-binding GTPase CDC46_RS14425 PF01016 Ribosomal L27 protein CDC46_RS14430 PF00829 Ribosomal prokaryotic L21 protein CDC46_RS14435 PF00348 Polyprenyl synthetase CDC46_RS14445 PF00571 CBS domain CDC46_RS14445 PF01595 Cyclin M transmembrane N-terminal domain CDC46_RS14445 PF03471 Transporter associated domain CDC46_RS14450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDC46_RS14450 PF00437 Type II/IV secretion system protein CDC46_RS14455 PF00482 Type II secretion system (T2SS), protein F CDC46_RS14460 PF01478 Type IV leader peptidase family CDC46_RS14460 PF06750 Bacterial Peptidase A24 N-terminal domain CDC46_RS14465 PF01121 Dephospho-CoA kinase CDC46_RS14470 PF07072 Cell division protein CDC46_RS14475 PF03884 DNA gyrase inhibitor YacG CDC46_RS14480 PF00293 NUDIX domain CDC46_RS14490 PF01960 ArgJ family CDC46_RS14495 PF07516 SecA Wing and Scaffold domain CDC46_RS14495 PF01043 SecA preprotein cross-linking domain CDC46_RS14495 PF02810 SEC-C motif CDC46_RS14495 PF07517 SecA DEAD-like domain CDC46_RS14500 PF01476 LysM domain CDC46_RS14500 PF01551 Peptidase family M23 CDC46_RS14500 PF08525 Opacity-associated protein A N-terminal motif CDC46_RS14510 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CDC46_RS14515 PF08534 Redoxin CDC46_RS14520 PF12327 FtsZ family, C-terminal domain CDC46_RS14520 PF00091 Tubulin/FtsZ family, GTPase domain CDC46_RS14525 PF02491 SHS2 domain inserted in FTSA CDC46_RS14530 PF03799 Cell division protein FtsQ CDC46_RS14530 PF08478 POTRA domain, FtsQ-type CDC46_RS14535 PF01820 D-ala D-ala ligase N-terminus CDC46_RS14535 PF07478 D-ala D-ala ligase C-terminus CDC46_RS14540 PF01225 Mur ligase family, catalytic domain CDC46_RS14540 PF08245 Mur ligase middle domain CDC46_RS14540 PF02875 Mur ligase family, glutamate ligase domain CDC46_RS14545 PF03033 Glycosyltransferase family 28 N-terminal domain CDC46_RS14545 PF04101 Glycosyltransferase family 28 C-terminal domain CDC46_RS14550 PF01098 Cell cycle protein CDC46_RS14555 PF08245 Mur ligase middle domain CDC46_RS14555 PF02875 Mur ligase family, glutamate ligase domain CDC46_RS14560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDC46_RS14560 PF00953 Glycosyl transferase family 4 CDC46_RS14565 PF08245 Mur ligase middle domain CDC46_RS14565 PF01225 Mur ligase family, catalytic domain CDC46_RS14565 PF02875 Mur ligase family, glutamate ligase domain CDC46_RS14570 PF08245 Mur ligase middle domain CDC46_RS14570 PF02875 Mur ligase family, glutamate ligase domain CDC46_RS14575 PF03717 Penicillin-binding Protein dimerisation domain CDC46_RS14575 PF00905 Penicillin binding protein transpeptidase domain CDC46_RS14580 PF04999 Cell division protein FtsL CDC46_RS14585 PF01795 MraW methylase family CDC46_RS14590 PF02381 MraZ protein, putative antitoxin-like CDC46_RS14595 PF03232 Ubiquinone biosynthesis protein COQ7 CDC46_RS14600 PF13609 Gram-negative porin CDC46_RS14605 PF00083 Sugar (and other) transporter CDC46_RS14605 PF07690 Major Facilitator Superfamily CDC46_RS14610 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS14610 PF00501 AMP-binding enzyme CDC46_RS14620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDC46_RS14620 PF00384 Molybdopterin oxidoreductase CDC46_RS14620 PF01568 Molydopterin dinucleotide binding domain CDC46_RS14625 PF00356 Bacterial regulatory proteins, lacI family CDC46_RS14630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDC46_RS14630 PF00391 PEP-utilising enzyme, mobile domain CDC46_RS14630 PF05524 PEP-utilising enzyme, N-terminal CDC46_RS14630 PF02896 PEP-utilising enzyme, TIM barrel domain CDC46_RS14630 PF00381 PTS HPr component phosphorylation site CDC46_RS14635 PF00294 pfkB family carbohydrate kinase CDC46_RS14640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDC46_RS14650 PF00005 ABC transporter CDC46_RS14650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC46_RS14655 PF00005 ABC transporter CDC46_RS14655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDC46_RS14660 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS14660 PF12911 N-terminal TM domain of oligopeptide transport permease C CDC46_RS14665 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS14670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDC46_RS14675 PF07687 Peptidase dimerisation domain CDC46_RS14675 PF01546 Peptidase family M20/M25/M40 CDC46_RS14705 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS14710 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS14715 PF03061 Thioesterase superfamily CDC46_RS14720 PF14535 AMP-binding enzyme C-terminal domain CDC46_RS14720 PF00501 AMP-binding enzyme CDC46_RS14735 PF04379 ApaG domain CDC46_RS14740 PF00834 Ribulose-phosphate 3 epimerase family CDC46_RS14745 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS14750 PF04715 Anthranilate synthase component I, N terminal region CDC46_RS14750 PF00425 chorismate binding enzyme CDC46_RS14755 PF00117 Glutamine amidotransferase class-I CDC46_RS14765 PF02885 Glycosyl transferase family, helical bundle domain CDC46_RS14765 PF00591 Glycosyl transferase family, a/b domain CDC46_RS14770 PF00218 Indole-3-glycerol phosphate synthase CDC46_RS14775 PF01928 CYTH domain CDC46_RS14780 PF03167 Uracil DNA glycosylase superfamily CDC46_RS14795 PF12805 FUSC-like inner membrane protein yccS CDC46_RS14805 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS14805 PF00107 Zinc-binding dehydrogenase CDC46_RS14810 PF10411 Disulfide bond isomerase protein N-terminus CDC46_RS14810 PF13098 Thioredoxin-like domain CDC46_RS14835 PF01464 Transglycosylase SLT domain CDC46_RS14845 PF06071 Protein of unknown function (DUF933) CDC46_RS14845 PF01926 50S ribosome-binding GTPase CDC46_RS14855 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CDC46_RS14855 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CDC46_RS14855 PF01488 Shikimate / quinate 5-dehydrogenase CDC46_RS14860 PF03462 PCRF domain CDC46_RS14860 PF00472 RF-1 domain CDC46_RS14870 PF17827 PrmC N-terminal domain CDC46_RS14870 PF05175 Methyltransferase small domain CDC46_RS14875 PF00462 Glutaredoxin CDC46_RS14880 PF02441 Flavoprotein CDC46_RS14890 PF04349 Periplasmic glucan biosynthesis protein, MdoG CDC46_RS14895 PF00535 Glycosyl transferase family 2 CDC46_RS14915 PF12848 ABC transporter CDC46_RS14915 PF00005 ABC transporter CDC46_RS14920 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CDC46_RS14925 PF00510 Cytochrome c oxidase subunit III CDC46_RS14930 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS14935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDC46_RS14935 PF06481 COX Aromatic Rich Motif CDC46_RS14945 PF16220 Domain of unknown function (DUF4880) CDC46_RS14945 PF04773 FecR protein CDC46_RS14950 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS14950 PF00593 TonB dependent receptor CDC46_RS14965 PF00072 Response regulator receiver domain CDC46_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS14980 PF04386 Stringent starvation protein B CDC46_RS14985 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS14985 PF00043 Glutathione S-transferase, C-terminal domain CDC46_RS14990 PF02167 Cytochrome C1 family CDC46_RS14995 PF00032 Cytochrome b(C-terminal)/b6/petD CDC46_RS14995 PF00033 Cytochrome b/b6/petB CDC46_RS15000 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CDC46_RS15000 PF00355 Rieske [2Fe-2S] domain CDC46_RS15005 PF01741 Large-conductance mechanosensitive channel, MscL CDC46_RS15010 PF01784 NIF3 (NGG1p interacting factor 3) CDC46_RS15015 PF17820 PDZ domain CDC46_RS15015 PF13180 PDZ domain CDC46_RS15020 PF13609 Gram-negative porin CDC46_RS15030 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS15030 PF00072 Response regulator receiver domain CDC46_RS15035 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS15035 PF08521 Two-component sensor kinase N-terminal CDC46_RS15035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS15050 PF00005 ABC transporter CDC46_RS15050 PF17912 MalK OB fold domain CDC46_RS15050 PF03459 TOBE domain CDC46_RS15055 PF00902 Sec-independent protein translocase protein (TatC) CDC46_RS15060 PF02416 mttA/Hcf106 family CDC46_RS15065 PF02416 mttA/Hcf106 family CDC46_RS15075 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CDC46_RS15080 PF01502 Phosphoribosyl-AMP cyclohydrolase CDC46_RS15085 PF00977 Histidine biosynthesis protein CDC46_RS15090 PF00977 Histidine biosynthesis protein CDC46_RS15095 PF00117 Glutamine amidotransferase class-I CDC46_RS15100 PF01914 MarC family integral membrane protein CDC46_RS15105 PF00475 Imidazoleglycerol-phosphate dehydratase CDC46_RS15110 PF00155 Aminotransferase class I and II CDC46_RS15115 PF00815 Histidinol dehydrogenase CDC46_RS15120 PF01634 ATP phosphoribosyltransferase CDC46_RS15125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDC46_RS15135 PF01061 ABC-2 type transporter CDC46_RS15140 PF00005 ABC transporter CDC46_RS15160 PF02470 MlaD protein CDC46_RS15165 PF02405 Permease MlaE CDC46_RS15170 PF00005 ABC transporter CDC46_RS15180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS15180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDC46_RS15195 PF03922 OmpW family CDC46_RS15200 PF13286 Phosphohydrolase-associated domain CDC46_RS15200 PF01966 HD domain CDC46_RS15205 PF01761 3-dehydroquinate synthase CDC46_RS15210 PF01202 Shikimate kinase CDC46_RS15215 PF00263 Bacterial type II and III secretion system protein CDC46_RS15215 PF11741 AMIN domain CDC46_RS15215 PF07660 Secretin and TonB N terminus short domain CDC46_RS15215 PF03958 Bacterial type II/III secretion system short domain CDC46_RS15230 PF05137 Fimbrial assembly protein (PilN) CDC46_RS15235 PF11104 Type IV pilus assembly protein PilM; CDC46_RS15240 PF00905 Penicillin binding protein transpeptidase domain CDC46_RS15240 PF17092 Penicillin-binding protein OB-like domain CDC46_RS15240 PF00912 Transglycosylase CDC46_RS15245 PF01491 Frataxin-like domain CDC46_RS15255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDC46_RS15255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDC46_RS15260 PF01794 Ferric reductase like transmembrane component CDC46_RS15265 PF00174 Oxidoreductase molybdopterin binding domain CDC46_RS15275 PF08281 Sigma-70, region 4 CDC46_RS15275 PF04542 Sigma-70 region 2 CDC46_RS15285 PF01578 Cytochrome C assembly protein CDC46_RS15290 PF05140 ResB-like family CDC46_RS15295 PF00034 Cytochrome c CDC46_RS15300 PF01926 50S ribosome-binding GTPase CDC46_RS15305 PF00490 Delta-aminolevulinic acid dehydratase CDC46_RS15310 PF02683 Cytochrome C biogenesis protein transmembrane region CDC46_RS15310 PF11412 Disulphide bond corrector protein DsbC CDC46_RS15320 PF01196 Ribosomal protein L17 CDC46_RS15325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDC46_RS15325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDC46_RS15325 PF01000 RNA polymerase Rpb3/RpoA insert domain CDC46_RS15330 PF00163 Ribosomal protein S4/S9 N-terminal domain CDC46_RS15330 PF01479 S4 domain CDC46_RS15335 PF00411 Ribosomal protein S11 CDC46_RS15340 PF00416 Ribosomal protein S13/S18 CDC46_RS15345 PF00444 Ribosomal protein L36 CDC46_RS15350 PF01176 Translation initiation factor 1A / IF-1 CDC46_RS15355 PF00344 SecY translocase CDC46_RS15360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDC46_RS15365 PF00327 Ribosomal protein L30p/L7e CDC46_RS15370 PF00333 Ribosomal protein S5, N-terminal domain CDC46_RS15370 PF03719 Ribosomal protein S5, C-terminal domain CDC46_RS15375 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDC46_RS15380 PF00347 Ribosomal protein L6 CDC46_RS15385 PF00410 Ribosomal protein S8 CDC46_RS15390 PF00253 Ribosomal protein S14p/S29e CDC46_RS15395 PF00673 ribosomal L5P family C-terminus CDC46_RS15395 PF00281 Ribosomal protein L5 CDC46_RS15400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDC46_RS15405 PF00238 Ribosomal protein L14p/L23e CDC46_RS15410 PF00366 Ribosomal protein S17 CDC46_RS15415 PF00831 Ribosomal L29 protein CDC46_RS15420 PF00252 Ribosomal protein L16p/L10e CDC46_RS15425 PF07650 KH domain CDC46_RS15425 PF00189 Ribosomal protein S3, C-terminal domain CDC46_RS15430 PF00237 Ribosomal protein L22p/L17e CDC46_RS15435 PF00203 Ribosomal protein S19 CDC46_RS15440 PF03947 Ribosomal Proteins L2, C-terminal domain CDC46_RS15440 PF00181 Ribosomal Proteins L2, RNA binding domain CDC46_RS15445 PF00276 Ribosomal protein L23 CDC46_RS15450 PF00573 Ribosomal protein L4/L1 family CDC46_RS15455 PF00297 Ribosomal protein L3 CDC46_RS15460 PF00338 Ribosomal protein S10p/S20e CDC46_RS15465 PF00009 Elongation factor Tu GTP binding domain CDC46_RS15465 PF03144 Elongation factor Tu domain 2 CDC46_RS15465 PF03143 Elongation factor Tu C-terminal domain CDC46_RS15475 PF00177 Ribosomal protein S7p/S5e CDC46_RS15480 PF00164 Ribosomal protein S12/S23 CDC46_RS15485 PF16124 RecQ zinc-binding CDC46_RS15485 PF09382 RQC domain CDC46_RS15485 PF00270 DEAD/DEAH box helicase CDC46_RS15485 PF00271 Helicase conserved C-terminal domain CDC46_RS15485 PF00570 HRDC domain CDC46_RS15495 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CDC46_RS15500 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CDC46_RS15505 PF10062 Predicted secreted protein (DUF2300) CDC46_RS15505 PF08486 Stage II sporulation protein CDC46_RS15510 PF00207 Alpha-2-macroglobulin family CDC46_RS15510 PF07703 Alpha-2-macroglobulin bait region domain CDC46_RS15510 PF01835 MG2 domain CDC46_RS15515 PF06672 Protein of unknown function (DUF1175) CDC46_RS15520 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CDC46_RS15525 PF05000 RNA polymerase Rpb1, domain 4 CDC46_RS15525 PF04983 RNA polymerase Rpb1, domain 3 CDC46_RS15525 PF00623 RNA polymerase Rpb1, domain 2 CDC46_RS15525 PF04997 RNA polymerase Rpb1, domain 1 CDC46_RS15525 PF04998 RNA polymerase Rpb1, domain 5 CDC46_RS15530 PF04560 RNA polymerase Rpb2, domain 7 CDC46_RS15530 PF04563 RNA polymerase beta subunit CDC46_RS15530 PF04561 RNA polymerase Rpb2, domain 2 CDC46_RS15530 PF00562 RNA polymerase Rpb2, domain 6 CDC46_RS15530 PF04565 RNA polymerase Rpb2, domain 3 CDC46_RS15530 PF10385 RNA polymerase beta subunit external 1 domain CDC46_RS15535 PF16320 Ribosomal protein L7/L12 dimerisation domain CDC46_RS15535 PF00542 Ribosomal protein L7/L12 C-terminal domain CDC46_RS15540 PF00466 Ribosomal protein L10 CDC46_RS15545 PF00687 Ribosomal protein L1p/L10e family CDC46_RS15550 PF00298 Ribosomal protein L11, RNA binding domain CDC46_RS15550 PF03946 Ribosomal protein L11, N-terminal domain CDC46_RS15555 PF02357 Transcription termination factor nusG CDC46_RS15555 PF00467 KOW motif CDC46_RS15570 PF00009 Elongation factor Tu GTP binding domain CDC46_RS15570 PF03144 Elongation factor Tu domain 2 CDC46_RS15570 PF03143 Elongation factor Tu C-terminal domain CDC46_RS15625 PF00455 DeoR C terminal sensor domain CDC46_RS15625 PF08220 DeoR-like helix-turn-helix domain CDC46_RS15630 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CDC46_RS15630 PF01266 FAD dependent oxidoreductase CDC46_RS15635 PF00005 ABC transporter CDC46_RS15635 PF08402 TOBE domain CDC46_RS15640 PF00005 ABC transporter CDC46_RS15640 PF17912 MalK OB fold domain CDC46_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS15650 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS15665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDC46_RS15665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDC46_RS15685 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CDC46_RS15690 PF04349 Periplasmic glucan biosynthesis protein, MdoG CDC46_RS15700 PF07690 Major Facilitator Superfamily CDC46_RS15705 PF07690 Major Facilitator Superfamily CDC46_RS15720 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS15720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS15720 PF00672 HAMP domain CDC46_RS15725 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS15725 PF00072 Response regulator receiver domain CDC46_RS15750 PF00924 Mechanosensitive ion channel CDC46_RS15755 PF07690 Major Facilitator Superfamily CDC46_RS15790 PF16916 Dimerisation domain of Zinc Transporter CDC46_RS15790 PF01545 Cation efflux family CDC46_RS15795 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS15795 PF00072 Response regulator receiver domain CDC46_RS15825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CDC46_RS15845 PF01355 High potential iron-sulfur protein CDC46_RS15850 PF00072 Response regulator receiver domain CDC46_RS15850 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS15855 PF03401 Tripartite tricarboxylate transporter family receptor CDC46_RS15865 PF13609 Gram-negative porin CDC46_RS15875 PF01546 Peptidase family M20/M25/M40 CDC46_RS15875 PF07687 Peptidase dimerisation domain CDC46_RS15890 PF02254 TrkA-N domain CDC46_RS15890 PF00999 Sodium/hydrogen exchanger family CDC46_RS15915 PF03797 Autotransporter beta-domain CDC46_RS15915 PF00082 Subtilase family CDC46_RS15915 PF12951 Passenger-associated-transport-repeat CDC46_RS15925 PF01037 Lrp/AsnC ligand binding domain CDC46_RS15930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC46_RS15945 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS15945 PF08334 Type II secretion system (T2SS), protein G CDC46_RS15950 PF12019 Type II transport protein GspH CDC46_RS15950 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS15955 PF02501 Type II secretion system (T2SS), protein I CDC46_RS15955 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS15960 PF11612 Type II secretion system (T2SS), protein J CDC46_RS15960 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS15990 PF00437 Type II/IV secretion system protein CDC46_RS15995 PF00482 Type II secretion system (T2SS), protein F CDC46_RS16010 PF00155 Aminotransferase class I and II CDC46_RS16010 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS16030 PF05598 Transposase domain (DUF772) CDC46_RS16050 PF08411 Exonuclease C-terminal CDC46_RS16050 PF00929 Exonuclease CDC46_RS16055 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CDC46_RS16060 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CDC46_RS16065 PF00171 Aldehyde dehydrogenase family CDC46_RS16070 PF01590 GAF domain CDC46_RS16070 PF02954 Bacterial regulatory protein, Fis family CDC46_RS16070 PF00158 Sigma-54 interaction domain CDC46_RS16075 PF00107 Zinc-binding dehydrogenase CDC46_RS16075 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS16080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC46_RS16080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC46_RS16115 PF00106 short chain dehydrogenase CDC46_RS16125 PF13180 PDZ domain CDC46_RS16135 PF01569 PAP2 superfamily CDC46_RS16140 PF00360 Phytochrome region CDC46_RS16140 PF00563 EAL domain CDC46_RS16140 PF01590 GAF domain CDC46_RS16140 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS16150 PF05598 Transposase domain (DUF772) CDC46_RS16170 PF01381 Helix-turn-helix CDC46_RS16210 PF00313 'Cold-shock' DNA-binding domain CDC46_RS16225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDC46_RS16225 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS16230 PF05175 Methyltransferase small domain CDC46_RS16240 PF00072 Response regulator receiver domain CDC46_RS16240 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS16250 PF13181 Tetratricopeptide repeat CDC46_RS16285 PF00375 Sodium:dicarboxylate symporter family CDC46_RS16300 PF02796 Helix-turn-helix domain of resolvase CDC46_RS16300 PF00239 Resolvase, N terminal domain CDC46_RS16340 PF02463 RecF/RecN/SMC N terminal domain CDC46_RS16355 PF13145 PPIC-type PPIASE domain CDC46_RS16360 PF08479 POTRA domain, ShlB-type CDC46_RS16360 PF17287 POTRA domain CDC46_RS16360 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CDC46_RS16365 PF05594 Haemagluttinin repeat CDC46_RS16365 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS16365 PF05860 haemagglutination activity domain CDC46_RS16365 PF13332 Hemagglutinin repeat CDC46_RS16390 PF05594 Haemagluttinin repeat CDC46_RS16390 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CDC46_RS16390 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS16390 PF13332 Hemagglutinin repeat CDC46_RS16390 PF05860 haemagglutination activity domain CDC46_RS16465 PF00873 AcrB/AcrD/AcrF family CDC46_RS16475 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS16480 PF02321 Outer membrane efflux protein CDC46_RS16485 PF00106 short chain dehydrogenase CDC46_RS16575 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CDC46_RS16645 PF12728 Helix-turn-helix domain CDC46_RS16690 PF00239 Resolvase, N terminal domain CDC46_RS16690 PF02796 Helix-turn-helix domain of resolvase CDC46_RS16730 PF00149 Calcineurin-like phosphoesterase CDC46_RS16730 PF02872 5'-nucleotidase, C-terminal domain CDC46_RS16770 PF00892 EamA-like transporter family CDC46_RS16775 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDC46_RS16775 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS16775 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding CDC46_RS16790 PF02021 Uncharacterised protein family UPF0102 CDC46_RS16795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS16800 PF03330 Lytic transglycolase CDC46_RS16800 PF05036 Sporulation related domain CDC46_RS16805 PF00753 Metallo-beta-lactamase superfamily CDC46_RS16820 PF03960 ArsC family CDC46_RS16830 PF01546 Peptidase family M20/M25/M40 CDC46_RS16830 PF07687 Peptidase dimerisation domain CDC46_RS16835 PF04115 Ureidoglycolate lyase CDC46_RS16840 PF03561 Allantoicase repeat CDC46_RS16845 PF00375 Sodium:dicarboxylate symporter family CDC46_RS16855 PF01205 Uncharacterized protein family UPF0029 CDC46_RS16855 PF09186 Domain of unknown function (DUF1949) CDC46_RS16870 PF03466 LysR substrate binding domain CDC46_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS16875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDC46_RS16875 PF00205 Thiamine pyrophosphate enzyme, central domain CDC46_RS16875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDC46_RS16880 PF01261 Xylose isomerase-like TIM barrel CDC46_RS16890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDC46_RS16890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDC46_RS16895 PF04055 Radical SAM superfamily CDC46_RS16895 PF06969 HemN C-terminal domain CDC46_RS16905 PF00765 Autoinducer synthase CDC46_RS16910 PF03472 Autoinducer binding domain CDC46_RS16910 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS16920 PF00580 UvrD/REP helicase N-terminal domain CDC46_RS16920 PF13361 UvrD-like helicase C-terminal domain CDC46_RS16940 PF01571 Aminomethyltransferase folate-binding domain CDC46_RS16940 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDC46_RS16945 PF01597 Glycine cleavage H-protein CDC46_RS16950 PF02347 Glycine cleavage system P-protein CDC46_RS16955 PF03315 Serine dehydratase beta chain CDC46_RS16955 PF03313 Serine dehydratase alpha chain CDC46_RS16960 PF03169 OPT oligopeptide transporter protein CDC46_RS16965 PF04107 Glutamate-cysteine ligase family 2(GCS2) CDC46_RS16975 PF13458 Periplasmic binding protein CDC46_RS16980 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CDC46_RS16980 PF01619 Proline dehydrogenase CDC46_RS16980 PF00171 Aldehyde dehydrogenase family CDC46_RS16980 PF14850 DNA-binding domain of Proline dehydrogenase CDC46_RS16990 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDC46_RS17010 PF00672 HAMP domain CDC46_RS17010 PF02743 Cache domain CDC46_RS17010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS17020 PF00043 Glutathione S-transferase, C-terminal domain CDC46_RS17020 PF02798 Glutathione S-transferase, N-terminal domain CDC46_RS17025 PF12849 PBP superfamily domain CDC46_RS17035 PF07859 alpha/beta hydrolase fold CDC46_RS17040 PF13380 CoA binding domain CDC46_RS17055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDC46_RS17055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDC46_RS17060 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDC46_RS17060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC46_RS17065 PF00231 ATP synthase CDC46_RS17070 PF00306 ATP synthase alpha/beta chain, C terminal domain CDC46_RS17070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC46_RS17070 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDC46_RS17075 PF00213 ATP synthase delta (OSCP) subunit CDC46_RS17080 PF00430 ATP synthase B/B' CF(0) CDC46_RS17085 PF00137 ATP synthase subunit C CDC46_RS17090 PF00119 ATP synthase A chain CDC46_RS17100 PF02195 ParB-like nuclease domain CDC46_RS17100 PF17762 HTH domain found in ParB protein CDC46_RS17110 PF02527 rRNA small subunit methyltransferase G CDC46_RS17115 PF13932 GidA associated domain CDC46_RS17115 PF01134 Glucose inhibited division protein A CDC46_RS17135 PF03466 LysR substrate binding domain CDC46_RS17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS17140 PF12843 Putative quorum-sensing-regulated virulence factor CDC46_RS17145 PF03466 LysR substrate binding domain CDC46_RS17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS17160 PF01925 Sulfite exporter TauE/SafE CDC46_RS17180 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS17190 PF00005 ABC transporter CDC46_RS17195 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS17195 PF00005 ABC transporter CDC46_RS17200 PF05199 GMC oxidoreductase CDC46_RS17200 PF00732 GMC oxidoreductase CDC46_RS17205 PF12147 Putative methyltransferase CDC46_RS17205 PF12146 Serine aminopeptidase, S33 CDC46_RS17210 PF09278 MerR, DNA binding CDC46_RS17210 PF00376 MerR family regulatory protein CDC46_RS17215 PF00403 Heavy-metal-associated domain CDC46_RS17225 PF03922 OmpW family CDC46_RS17240 PF02423 Ornithine cyclodeaminase/mu-crystallin family CDC46_RS17245 PF07947 YhhN family CDC46_RS17250 PF01037 Lrp/AsnC ligand binding domain CDC46_RS17255 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CDC46_RS17260 PF01329 Pterin 4 alpha carbinolamine dehydratase CDC46_RS17275 PF00216 Bacterial DNA-binding protein CDC46_RS17285 PF02558 Ketopantoate reductase PanE/ApbA CDC46_RS17285 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDC46_RS17295 PF00149 Calcineurin-like phosphoesterase CDC46_RS17295 PF02872 5'-nucleotidase, C-terminal domain CDC46_RS17300 PF05209 Septum formation inhibitor MinC, N-terminal domain CDC46_RS17300 PF03775 Septum formation inhibitor MinC, C-terminal domain CDC46_RS17305 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDC46_RS17310 PF03776 Septum formation topological specificity factor MinE CDC46_RS17315 PF02515 CoA-transferase family III CDC46_RS17320 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CDC46_RS17330 PF00708 Acylphosphatase CDC46_RS17340 PF00005 ABC transporter CDC46_RS17350 PF01048 Phosphorylase superfamily CDC46_RS17385 PF03814 Potassium-transporting ATPase A subunit CDC46_RS17395 PF02669 K+-transporting ATPase, c chain CDC46_RS17400 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS17400 PF13492 GAF domain CDC46_RS17400 PF13493 Domain of unknown function (DUF4118) CDC46_RS17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS17400 PF02702 Osmosensitive K+ channel His kinase sensor domain CDC46_RS17410 PF03180 NLPA lipoprotein CDC46_RS17415 PF00563 EAL domain CDC46_RS17415 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS17415 PF01590 GAF domain CDC46_RS17415 PF00360 Phytochrome region CDC46_RS17420 PF00072 Response regulator receiver domain CDC46_RS17420 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS17440 PF00072 Response regulator receiver domain CDC46_RS17440 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS17445 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS17465 PF02384 N-6 DNA Methylase CDC46_RS17465 PF12161 HsdM N-terminal domain CDC46_RS17470 PF02082 Transcriptional regulator CDC46_RS17475 PF00175 Oxidoreductase NAD-binding domain CDC46_RS17475 PF00042 Globin CDC46_RS17475 PF00970 Oxidoreductase FAD-binding domain CDC46_RS17485 PF07690 Major Facilitator Superfamily CDC46_RS17500 PF08521 Two-component sensor kinase N-terminal CDC46_RS17500 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS17500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS17505 PF00072 Response regulator receiver domain CDC46_RS17505 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS17520 PF01266 FAD dependent oxidoreductase CDC46_RS17525 PF00005 ABC transporter CDC46_RS17530 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS17535 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS17545 PF00672 HAMP domain CDC46_RS17545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS17550 PF02661 Fic/DOC family CDC46_RS17555 PF01062 Bestrophin, RFP-TM, chloride channel CDC46_RS17595 PF05598 Transposase domain (DUF772) CDC46_RS17635 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS17650 PF08676 MutL C terminal dimerisation domain CDC46_RS17650 PF01119 DNA mismatch repair protein, C-terminal domain CDC46_RS17655 PF00145 C-5 cytosine-specific DNA methylase CDC46_RS17660 PF03852 DNA mismatch endonuclease Vsr CDC46_RS17665 PF00204 DNA gyrase B CDC46_RS17665 PF00986 DNA gyrase B subunit, carboxyl terminus CDC46_RS17665 PF18053 DNA gyrase B subunit insert domain CDC46_RS17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS17665 PF01751 Toprim domain CDC46_RS17670 PF00712 DNA polymerase III beta subunit, N-terminal domain CDC46_RS17670 PF02767 DNA polymerase III beta subunit, central domain CDC46_RS17670 PF02768 DNA polymerase III beta subunit, C-terminal domain CDC46_RS17675 PF00308 Bacterial dnaA protein CDC46_RS17675 PF08299 Bacterial dnaA protein helix-turn-helix CDC46_RS17675 PF11638 DnaA N-terminal domain CDC46_RS17690 PF00313 'Cold-shock' DNA-binding domain CDC46_RS17695 PF13614 AAA domain CDC46_RS17700 PF17762 HTH domain found in ParB protein CDC46_RS17700 PF02195 ParB-like nuclease domain CDC46_RS17710 PF00483 Nucleotidyl transferase CDC46_RS17715 PF00083 Sugar (and other) transporter CDC46_RS17720 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS17720 PF02743 Cache domain CDC46_RS17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS17725 PF00158 Sigma-54 interaction domain CDC46_RS17725 PF00072 Response regulator receiver domain CDC46_RS17725 PF02954 Bacterial regulatory protein, Fis family CDC46_RS17730 PF10086 YhfC intramembrane metalloprotease CDC46_RS17740 PF08448 PAS fold CDC46_RS17740 PF13426 PAS domain CDC46_RS17740 PF00563 EAL domain CDC46_RS17740 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS17740 PF05231 MASE1 CDC46_RS17740 PF08447 PAS fold CDC46_RS17745 PF13458 Periplasmic binding protein CDC46_RS17750 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS17755 PF11862 Domain of unknown function (DUF3382) CDC46_RS17755 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS17760 PF00005 ABC transporter CDC46_RS17760 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS17765 PF00005 ABC transporter CDC46_RS17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS17770 PF03466 LysR substrate binding domain CDC46_RS17785 PF00654 Voltage gated chloride channel CDC46_RS17800 PF01161 Phosphatidylethanolamine-binding protein CDC46_RS17830 PF00816 H-NS histone family CDC46_RS17840 PF00905 Penicillin binding protein transpeptidase domain CDC46_RS17850 PF01494 FAD binding domain CDC46_RS17865 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS17870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS17870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS17870 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS17875 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS17875 PF00501 AMP-binding enzyme CDC46_RS17905 PF01965 DJ-1/PfpI family CDC46_RS17905 PF12833 Helix-turn-helix domain CDC46_RS17910 PF03315 Serine dehydratase beta chain CDC46_RS17910 PF03313 Serine dehydratase alpha chain CDC46_RS17915 PF01266 FAD dependent oxidoreductase CDC46_RS17920 PF04267 Sarcosine oxidase, delta subunit family CDC46_RS17925 PF17806 Sarcosine oxidase A3 domain CDC46_RS17925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS17925 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDC46_RS17925 PF01571 Aminomethyltransferase folate-binding domain CDC46_RS17940 PF13609 Gram-negative porin CDC46_RS17945 PF07690 Major Facilitator Superfamily CDC46_RS17950 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS17950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDC46_RS17955 PF01965 DJ-1/PfpI family CDC46_RS17955 PF12833 Helix-turn-helix domain CDC46_RS17965 PF00464 Serine hydroxymethyltransferase CDC46_RS17970 PF01244 Membrane dipeptidase (Peptidase family M19) CDC46_RS17980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDC46_RS17985 PF13183 4Fe-4S dicluster domain CDC46_RS17985 PF02754 Cysteine-rich domain CDC46_RS17990 PF00766 Electron transfer flavoprotein FAD-binding domain CDC46_RS17990 PF01012 Electron transfer flavoprotein domain CDC46_RS18000 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CDC46_RS18000 PF00355 Rieske [2Fe-2S] domain CDC46_RS18005 PF00175 Oxidoreductase NAD-binding domain CDC46_RS18005 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS18005 PF00970 Oxidoreductase FAD-binding domain CDC46_RS18010 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CDC46_RS18015 PF00551 Formyl transferase CDC46_RS18020 PF00571 CBS domain CDC46_RS18020 PF00005 ABC transporter CDC46_RS18025 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS18030 PF01965 DJ-1/PfpI family CDC46_RS18030 PF12833 Helix-turn-helix domain CDC46_RS18035 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS18035 PF00107 Zinc-binding dehydrogenase CDC46_RS18065 PF00083 Sugar (and other) transporter CDC46_RS18070 PF01381 Helix-turn-helix CDC46_RS18075 PF05973 Phage derived protein Gp49-like (DUF891) CDC46_RS18080 PF07690 Major Facilitator Superfamily CDC46_RS18090 PF01638 HxlR-like helix-turn-helix CDC46_RS18115 PF05593 RHS Repeat CDC46_RS18115 PF03527 RHS protein CDC46_RS18125 PF00589 Phage integrase family CDC46_RS18125 PF13495 Phage integrase, N-terminal SAM-like domain CDC46_RS18135 PF03527 RHS protein CDC46_RS18135 PF05593 RHS Repeat CDC46_RS18155 PF00593 TonB dependent receptor CDC46_RS18155 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS18170 PF13296 Putative type VI secretion system Rhs element Vgr CDC46_RS18170 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS18170 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CDC46_RS18205 PF17863 AAA lid domain CDC46_RS18205 PF07726 ATPase family associated with various cellular activities (AAA) CDC46_RS18215 PF13559 Domain of unknown function (DUF4129) CDC46_RS18215 PF11992 Domain of unknown function (DUF3488) CDC46_RS18215 PF01841 Transglutaminase-like superfamily CDC46_RS18220 PF00484 Carbonic anhydrase CDC46_RS18225 PF00916 Sulfate permease family CDC46_RS18225 PF01740 STAS domain CDC46_RS18260 PF04303 PrpF protein CDC46_RS18270 PF00285 Citrate synthase, C-terminal domain CDC46_RS18280 PF02954 Bacterial regulatory protein, Fis family CDC46_RS18280 PF00158 Sigma-54 interaction domain CDC46_RS18280 PF06506 Propionate catabolism activator CDC46_RS18310 PF13361 UvrD-like helicase C-terminal domain CDC46_RS18310 PF00580 UvrD/REP helicase N-terminal domain CDC46_RS18320 PF00072 Response regulator receiver domain CDC46_RS18320 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS18350 PF01095 Pectinesterase CDC46_RS18365 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS18365 PF14245 Type IV pilin PilA CDC46_RS18370 PF08334 Type II secretion system (T2SS), protein G CDC46_RS18370 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS18375 PF00263 Bacterial type II and III secretion system protein CDC46_RS18375 PF03958 Bacterial type II/III secretion system short domain CDC46_RS18400 PF00437 Type II/IV secretion system protein CDC46_RS18405 PF00482 Type II secretion system (T2SS), protein F CDC46_RS18410 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS18410 PF08334 Type II secretion system (T2SS), protein G CDC46_RS18425 PF05598 Transposase domain (DUF772) CDC46_RS18460 PF00150 Cellulase (glycosyl hydrolase family 5) CDC46_RS18470 PF01554 MatE CDC46_RS18475 PF03621 MbtH-like protein CDC46_RS18520 PF00266 Aminotransferase class-V CDC46_RS18525 PF08241 Methyltransferase domain CDC46_RS18580 PF07690 Major Facilitator Superfamily CDC46_RS18585 PF10282 Lactonase, 7-bladed beta-propeller CDC46_RS18615 PF01925 Sulfite exporter TauE/SafE CDC46_RS18635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDC46_RS18635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDC46_RS18645 PF00561 alpha/beta hydrolase fold CDC46_RS18655 PF02600 Disulfide bond formation protein DsbB CDC46_RS18660 PF00202 Aminotransferase class-III CDC46_RS18680 PF03061 Thioesterase superfamily CDC46_RS18700 PF05598 Transposase domain (DUF772) CDC46_RS18700 PF01609 Transposase DDE domain CDC46_RS18740 PF01048 Phosphorylase superfamily CDC46_RS18740 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CDC46_RS18775 PF01593 Flavin containing amine oxidoreductase CDC46_RS18790 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS18800 PF00072 Response regulator receiver domain CDC46_RS18805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS18805 PF03466 LysR substrate binding domain CDC46_RS18810 PF00355 Rieske [2Fe-2S] domain CDC46_RS18815 PF00175 Oxidoreductase NAD-binding domain CDC46_RS18815 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS18820 PF01047 MarR family CDC46_RS18825 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS18830 PF00171 Aldehyde dehydrogenase family CDC46_RS18835 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS18835 PF00501 AMP-binding enzyme CDC46_RS18840 PF06505 Activator of aromatic catabolism CDC46_RS18840 PF02954 Bacterial regulatory protein, Fis family CDC46_RS18840 PF00158 Sigma-54 interaction domain CDC46_RS18840 PF02830 V4R domain CDC46_RS18845 PF00171 Aldehyde dehydrogenase family CDC46_RS18860 PF07859 alpha/beta hydrolase fold CDC46_RS18865 PF04909 Amidohydrolase CDC46_RS18870 PF07690 Major Facilitator Superfamily CDC46_RS18875 PF00128 Alpha amylase, catalytic domain CDC46_RS18880 PF02446 4-alpha-glucanotransferase CDC46_RS18890 PF00128 Alpha amylase, catalytic domain CDC46_RS18890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDC46_RS18910 PF11896 Domain of unknown function (DUF3416) CDC46_RS18910 PF00128 Alpha amylase, catalytic domain CDC46_RS18915 PF08323 Starch synthase catalytic domain CDC46_RS18915 PF00534 Glycosyl transferases group 1 CDC46_RS18920 PF05171 Haemin-degrading HemS.ChuX domain CDC46_RS18925 PF00593 TonB dependent receptor CDC46_RS18925 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS18930 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDC46_RS18930 PF00578 AhpC/TSA family CDC46_RS18935 PF13192 Thioredoxin domain CDC46_RS18935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS18940 PF01475 Ferric uptake regulator family CDC46_RS18960 PF04023 FeoA domain CDC46_RS18960 PF07664 Ferrous iron transport protein B C terminus CDC46_RS18960 PF07670 Nucleoside recognition CDC46_RS18960 PF02421 Ferrous iron transport protein B CDC46_RS18960 PF17910 FeoB cytosolic helical domain CDC46_RS18970 PF13426 PAS domain CDC46_RS18970 PF08448 PAS fold CDC46_RS18970 PF08447 PAS fold CDC46_RS18970 PF05231 MASE1 CDC46_RS18970 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS18970 PF00563 EAL domain CDC46_RS18975 PF00563 EAL domain CDC46_RS18975 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS18975 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS18980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS18980 PF08447 PAS fold CDC46_RS19000 PF01470 Pyroglutamyl peptidase CDC46_RS19015 PF04349 Periplasmic glucan biosynthesis protein, MdoG CDC46_RS19025 PF00583 Acetyltransferase (GNAT) family CDC46_RS19065 PF07687 Peptidase dimerisation domain CDC46_RS19065 PF01546 Peptidase family M20/M25/M40 CDC46_RS19085 PF02839 Carbohydrate binding domain CDC46_RS19090 PF00571 CBS domain CDC46_RS19090 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS19095 PF01204 Trehalase CDC46_RS19115 PF07694 5TMR of 5TMR-LYT CDC46_RS19115 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS19120 PF13520 Amino acid permease CDC46_RS19125 PF01554 MatE CDC46_RS19140 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS19160 PF00535 Glycosyl transferase family 2 CDC46_RS19175 PF13533 Biotin-lipoyl like CDC46_RS19180 PF00664 ABC transporter transmembrane region CDC46_RS19180 PF03412 Peptidase C39 family CDC46_RS19180 PF00005 ABC transporter CDC46_RS19215 PF00672 HAMP domain CDC46_RS19215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS19215 PF02203 Tar ligand binding domain homologue CDC46_RS19235 PF03060 Nitronate monooxygenase CDC46_RS19240 PF03466 LysR substrate binding domain CDC46_RS19240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS19245 PF10400 Virulence activator alpha C-term CDC46_RS19245 PF03551 Transcriptional regulator PadR-like family CDC46_RS19260 PF02321 Outer membrane efflux protein CDC46_RS19265 PF00873 AcrB/AcrD/AcrF family CDC46_RS19270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS19270 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS19275 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS19275 PF00072 Response regulator receiver domain CDC46_RS19280 PF00672 HAMP domain CDC46_RS19280 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS19285 PF03060 Nitronate monooxygenase CDC46_RS19295 PF00582 Universal stress protein family CDC46_RS19305 PF00403 Heavy-metal-associated domain CDC46_RS19310 PF13411 MerR HTH family regulatory protein CDC46_RS19320 PF00682 HMGL-like CDC46_RS19320 PF08502 LeuA allosteric (dimerisation) domain CDC46_RS19335 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS19335 PF01799 [2Fe-2S] binding domain CDC46_RS19340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDC46_RS19345 PF02566 OsmC-like protein CDC46_RS19360 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC46_RS19375 PF06434 Aconitate hydratase 2 N-terminus CDC46_RS19375 PF00330 Aconitase family (aconitate hydratase) CDC46_RS19375 PF11791 Aconitate B N-terminal domain CDC46_RS19380 PF05433 Glycine zipper 2TM domain CDC46_RS19385 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS19385 PF00563 EAL domain CDC46_RS19385 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS19390 PF00816 H-NS histone family CDC46_RS19395 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS19395 PF07702 UTRA domain CDC46_RS19400 PF13609 Gram-negative porin CDC46_RS19405 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS19420 PF17656 FlgA N-terminal domain CDC46_RS19420 PF13144 Chaperone for flagella basal body P-ring formation CDC46_RS19425 PF00460 Flagella basal body rod protein CDC46_RS19430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDC46_RS19430 PF00460 Flagella basal body rod protein CDC46_RS19435 PF13860 FlgD Ig-like domain CDC46_RS19435 PF13861 FlgD Tudor-like domain CDC46_RS19435 PF03963 Flagellar hook capping protein - N-terminal region CDC46_RS19440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDC46_RS19440 PF00460 Flagella basal body rod protein CDC46_RS19440 PF07559 Flagellar basal body protein FlaE CDC46_RS19445 PF00460 Flagella basal body rod protein CDC46_RS19445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDC46_RS19450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDC46_RS19450 PF00460 Flagella basal body rod protein CDC46_RS19455 PF02107 Flagellar L-ring protein CDC46_RS19460 PF02119 Flagellar P-ring protein CDC46_RS19465 PF10135 Rod binding protein CDC46_RS19465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDC46_RS19470 PF00460 Flagella basal body rod protein CDC46_RS19470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDC46_RS19475 PF00669 Bacterial flagellin N-terminal helical region CDC46_RS19485 PF04820 Tryptophan halogenase CDC46_RS19490 PF08241 Methyltransferase domain CDC46_RS19500 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS19500 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS19505 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS19505 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS19520 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS19520 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS19540 PF00221 Aromatic amino acid lyase CDC46_RS19550 PF00501 AMP-binding enzyme CDC46_RS19550 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS19560 PF00550 Phosphopantetheine attachment site CDC46_RS19570 PF01553 Acyltransferase CDC46_RS19580 PF01311 Bacterial export proteins, family 1 CDC46_RS19585 PF01313 Bacterial export proteins, family 3 CDC46_RS19590 PF00813 FliP family CDC46_RS19595 PF04347 Flagellar biosynthesis protein, FliO CDC46_RS19600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDC46_RS19605 PF02154 Flagellar motor switch protein FliM CDC46_RS19605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDC46_RS19615 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS19615 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS19615 PF00563 EAL domain CDC46_RS19620 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS19620 PF00072 Response regulator receiver domain CDC46_RS19625 PF00700 Bacterial flagellin C-terminal helical region CDC46_RS19625 PF00669 Bacterial flagellin N-terminal helical region CDC46_RS19630 PF02465 Flagellar hook-associated protein 2 N-terminus CDC46_RS19630 PF07195 Flagellar hook-associated protein 2 C-terminus CDC46_RS19630 PF07196 Flagellin hook IN motif CDC46_RS19635 PF02561 Flagellar protein FliS CDC46_RS19645 PF01047 MarR family CDC46_RS19650 PF00535 Glycosyl transferase family 2 CDC46_RS19660 PF02049 Flagellar hook-basal body complex protein FliE CDC46_RS19665 PF08345 Flagellar M-ring protein C-terminal CDC46_RS19665 PF01514 Secretory protein of YscJ/FliF family CDC46_RS19670 PF01706 FliG C-terminal domain CDC46_RS19670 PF14842 FliG N-terminal domain CDC46_RS19670 PF14841 FliG middle domain CDC46_RS19675 PF02108 Flagellar assembly protein FliH CDC46_RS19680 PF18269 T3SS EscN ATPase C-terminal domain CDC46_RS19680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC46_RS19705 PF01590 GAF domain CDC46_RS19705 PF00563 EAL domain CDC46_RS19705 PF00360 Phytochrome region CDC46_RS19705 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS19715 PF00563 EAL domain CDC46_RS19715 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS19715 PF01590 GAF domain CDC46_RS19715 PF00360 Phytochrome region CDC46_RS19780 PF07690 Major Facilitator Superfamily CDC46_RS19795 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS19795 PF00593 TonB dependent receptor CDC46_RS19800 PF08281 Sigma-70, region 4 CDC46_RS19800 PF04542 Sigma-70 region 2 CDC46_RS19805 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS19805 PF00593 TonB dependent receptor CDC46_RS19810 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS19815 PF02423 Ornithine cyclodeaminase/mu-crystallin family CDC46_RS19820 PF06276 Ferric iron reductase FhuF-like transporter CDC46_RS19820 PF04183 IucA / IucC family CDC46_RS19825 PF07690 Major Facilitator Superfamily CDC46_RS19830 PF06276 Ferric iron reductase FhuF-like transporter CDC46_RS19830 PF04183 IucA / IucC family CDC46_RS19835 PF04183 IucA / IucC family CDC46_RS19835 PF06276 Ferric iron reductase FhuF-like transporter CDC46_RS19840 PF03328 HpcH/HpaI aldolase/citrate lyase family CDC46_RS19845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDC46_RS19845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDC46_RS19850 PF01738 Dienelactone hydrolase family CDC46_RS19850 PF00156 Phosphoribosyl transferase domain CDC46_RS19870 PF07690 Major Facilitator Superfamily CDC46_RS19875 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS19875 PF00107 Zinc-binding dehydrogenase CDC46_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS19895 PF03466 LysR substrate binding domain CDC46_RS19905 PF07690 Major Facilitator Superfamily CDC46_RS19915 PF13533 Biotin-lipoyl like CDC46_RS19925 PF02321 Outer membrane efflux protein CDC46_RS19940 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDC46_RS19945 PF01370 NAD dependent epimerase/dehydratase family CDC46_RS19950 PF03466 LysR substrate binding domain CDC46_RS19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS19975 PF02796 Helix-turn-helix domain of resolvase CDC46_RS19975 PF00665 Integrase core domain CDC46_RS19980 PF01695 IstB-like ATP binding protein CDC46_RS20050 PF00482 Type II secretion system (T2SS), protein F CDC46_RS20055 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS20055 PF08334 Type II secretion system (T2SS), protein G CDC46_RS20065 PF08334 Type II secretion system (T2SS), protein G CDC46_RS20065 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS20085 PF03958 Bacterial type II/III secretion system short domain CDC46_RS20085 PF00263 Bacterial type II and III secretion system protein CDC46_RS20085 PF07660 Secretin and TonB N terminus short domain CDC46_RS20085 PF11741 AMIN domain CDC46_RS20105 PF00872 Transposase, Mutator family CDC46_RS20110 PF00005 ABC transporter CDC46_RS20115 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS20120 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS20125 PF01037 Lrp/AsnC ligand binding domain CDC46_RS20130 PF02423 Ornithine cyclodeaminase/mu-crystallin family CDC46_RS20140 PF13419 Haloacid dehalogenase-like hydrolase CDC46_RS20155 PF07687 Peptidase dimerisation domain CDC46_RS20155 PF01546 Peptidase family M20/M25/M40 CDC46_RS20160 PF00672 HAMP domain CDC46_RS20160 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS20165 PF00072 Response regulator receiver domain CDC46_RS20165 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS20175 PF02321 Outer membrane efflux protein CDC46_RS20180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS20180 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS20185 PF00873 AcrB/AcrD/AcrF family CDC46_RS20190 PF01230 HIT domain CDC46_RS20235 PF01842 ACT domain CDC46_RS20235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC46_RS20235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC46_RS20245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS20245 PF00672 HAMP domain CDC46_RS20245 PF02203 Tar ligand binding domain homologue CDC46_RS20260 PF02350 UDP-N-acetylglucosamine 2-epimerase CDC46_RS20280 PF00924 Mechanosensitive ion channel CDC46_RS20300 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS20300 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CDC46_RS20300 PF13296 Putative type VI secretion system Rhs element Vgr CDC46_RS20305 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS20305 PF05230 MASE2 domain CDC46_RS20310 PF01566 Natural resistance-associated macrophage protein CDC46_RS20315 PF00012 Hsp70 protein CDC46_RS20325 PF00072 Response regulator receiver domain CDC46_RS20325 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS20330 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS20335 PF13460 NAD(P)H-binding CDC46_RS20355 PF13533 Biotin-lipoyl like CDC46_RS20360 PF00873 AcrB/AcrD/AcrF family CDC46_RS20365 PF00543 Nitrogen regulatory protein P-II CDC46_RS20370 PF11838 ERAP1-like C-terminal domain CDC46_RS20370 PF01433 Peptidase family M1 domain CDC46_RS20380 PF00149 Calcineurin-like phosphoesterase CDC46_RS20385 PF03466 LysR substrate binding domain CDC46_RS20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS20390 PF07690 Major Facilitator Superfamily CDC46_RS20435 PF17287 POTRA domain CDC46_RS20435 PF08479 POTRA domain, ShlB-type CDC46_RS20435 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CDC46_RS20440 PF01979 Amidohydrolase family CDC46_RS20450 PF02583 Metal-sensitive transcriptional repressor CDC46_RS20455 PF09828 Chromate resistance exported protein CDC46_RS20460 PF02417 Chromate transporter CDC46_RS20465 PF09828 Chromate resistance exported protein CDC46_RS20505 PF00578 AhpC/TSA family CDC46_RS20545 PF01555 DNA methylase CDC46_RS20545 PF18755 Restriction Enzyme Adenine Methylase Associated CDC46_RS20595 PF00041 Fibronectin type III domain CDC46_RS20595 PF00553 Cellulose binding domain CDC46_RS20595 PF01341 Glycosyl hydrolases family 6 CDC46_RS20600 PF05598 Transposase domain (DUF772) CDC46_RS20620 PF00106 short chain dehydrogenase CDC46_RS20685 PF01584 CheW-like domain CDC46_RS20685 PF00072 Response regulator receiver domain CDC46_RS20710 PF00082 Subtilase family CDC46_RS20710 PF05922 Peptidase inhibitor I9 CDC46_RS20715 PF05138 Phenylacetic acid catabolic protein CDC46_RS20720 PF06243 Phenylacetic acid degradation B CDC46_RS20725 PF05138 Phenylacetic acid catabolic protein CDC46_RS20730 PF01883 Iron-sulfur cluster assembly protein CDC46_RS20735 PF00111 2Fe-2S iron-sulfur cluster binding domain CDC46_RS20735 PF00175 Oxidoreductase NAD-binding domain CDC46_RS20735 PF00970 Oxidoreductase FAD-binding domain CDC46_RS20765 PF00881 Nitroreductase family CDC46_RS20770 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDC46_RS20770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDC46_RS20775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CDC46_RS20780 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDC46_RS20780 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDC46_RS20785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS20785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC46_RS20795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS20800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS20805 PF01888 CbiD CDC46_RS20810 PF01903 CbiX CDC46_RS20815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDC46_RS20815 PF14824 Sirohaem biosynthesis protein central CDC46_RS20815 PF10414 Sirohaem synthase dimerisation region CDC46_RS20825 PF13519 von Willebrand factor type A domain CDC46_RS20825 PF07728 AAA domain (dynein-related subfamily) CDC46_RS20825 PF17863 AAA lid domain CDC46_RS20830 PF02514 CobN/Magnesium Chelatase CDC46_RS20840 PF03824 High-affinity nickel-transport protein CDC46_RS20845 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS20870 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CDC46_RS20875 PF01757 Acyltransferase family CDC46_RS20880 PF04542 Sigma-70 region 2 CDC46_RS20880 PF08281 Sigma-70, region 4 CDC46_RS20890 PF00005 ABC transporter CDC46_RS20890 PF00664 ABC transporter transmembrane region CDC46_RS20895 PF12706 Beta-lactamase superfamily domain CDC46_RS20895 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain CDC46_RS20900 PF03621 MbtH-like protein CDC46_RS20910 PF00975 Thioesterase domain CDC46_RS20910 PF00550 Phosphopantetheine attachment site CDC46_RS20910 PF00668 Condensation domain CDC46_RS20910 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS20910 PF00501 AMP-binding enzyme CDC46_RS20920 PF01037 Lrp/AsnC ligand binding domain CDC46_RS20925 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS20935 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS20940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDC46_RS20940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDC46_RS20945 PF00171 Aldehyde dehydrogenase family CDC46_RS20950 PF00501 AMP-binding enzyme CDC46_RS20950 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS20955 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS20955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS20955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS20960 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CDC46_RS20960 PF12833 Helix-turn-helix domain CDC46_RS20965 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS20965 PF00672 HAMP domain CDC46_RS20965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS20970 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS20970 PF00072 Response regulator receiver domain CDC46_RS20975 PF00394 Multicopper oxidase CDC46_RS20975 PF07731 Multicopper oxidase CDC46_RS20975 PF07732 Multicopper oxidase CDC46_RS20980 PF05275 Copper resistance protein B precursor (CopB) CDC46_RS20985 PF04234 CopC domain CDC46_RS20990 PF05425 Copper resistance protein D CDC46_RS21000 PF00857 Isochorismatase family CDC46_RS21005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS21005 PF03466 LysR substrate binding domain CDC46_RS21010 PF07690 Major Facilitator Superfamily CDC46_RS21015 PF01047 MarR family CDC46_RS21020 PF01544 CorA-like Mg2+ transporter protein CDC46_RS21025 PF13302 Acetyltransferase (GNAT) domain CDC46_RS21025 PF00958 GMP synthase C terminal domain CDC46_RS21025 PF00117 Glutamine amidotransferase class-I CDC46_RS21025 PF03352 Methyladenine glycosylase CDC46_RS21025 PF13673 Acetyltransferase (GNAT) domain CDC46_RS21030 PF07690 Major Facilitator Superfamily CDC46_RS21040 PF02321 Outer membrane efflux protein CDC46_RS21045 PF00873 AcrB/AcrD/AcrF family CDC46_RS21050 PF00378 Enoyl-CoA hydratase/isomerase CDC46_RS21060 PF03783 Curli production assembly/transport component CsgG CDC46_RS21070 PF05643 Putative bacterial lipoprotein (DUF799) CDC46_RS21080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS21080 PF03466 LysR substrate binding domain CDC46_RS21085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CDC46_RS21085 PF01243 Pyridoxamine 5'-phosphate oxidase CDC46_RS21090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDC46_RS21090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDC46_RS21095 PF00218 Indole-3-glycerol phosphate synthase CDC46_RS21100 PF02885 Glycosyl transferase family, helical bundle domain CDC46_RS21100 PF00591 Glycosyl transferase family, a/b domain CDC46_RS21105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS21105 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDC46_RS21110 PF01168 Alanine racemase, N-terminal domain CDC46_RS21130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDC46_RS21130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDC46_RS21130 PF02770 Acyl-CoA dehydrogenase, middle domain CDC46_RS21150 PF04209 homogentisate 1,2-dioxygenase CDC46_RS21155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS21155 PF03466 LysR substrate binding domain CDC46_RS21165 PF03301 Tryptophan 2,3-dioxygenase CDC46_RS21175 PF00266 Aminotransferase class-V CDC46_RS21180 PF00106 short chain dehydrogenase CDC46_RS21185 PF00155 Aminotransferase class I and II CDC46_RS21190 PF00472 RF-1 domain CDC46_RS21205 PF01494 FAD binding domain CDC46_RS21225 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDC46_RS21225 PF00005 ABC transporter CDC46_RS21230 PF00005 ABC transporter CDC46_RS21240 PF00067 Cytochrome P450 CDC46_RS21245 PF00892 EamA-like transporter family CDC46_RS21265 PF01063 Amino-transferase class IV CDC46_RS21280 PF03150 Di-haem cytochrome c peroxidase CDC46_RS21300 PF01958 Domain of unknown function DUF108 CDC46_RS21300 PF03447 Homoserine dehydrogenase, NAD binding domain CDC46_RS21330 PF00982 Glycosyltransferase family 20 CDC46_RS21360 PF06715 Gp5 C-terminal repeat (3 copies) CDC46_RS21360 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS21370 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CDC46_RS21385 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CDC46_RS21390 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CDC46_RS21400 PF04965 Gene 25-like lysozyme CDC46_RS21405 PF05947 Type VI secretion system, TssF CDC46_RS21415 PF17871 AAA lid domain CDC46_RS21415 PF00004 ATPase family associated with various cellular activities (AAA) CDC46_RS21415 PF07724 AAA domain (Cdc48 subfamily) CDC46_RS21415 PF10431 C-terminal, D2-small domain, of ClpB protein CDC46_RS21420 PF06715 Gp5 C-terminal repeat (3 copies) CDC46_RS21420 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS21460 PF02638 Glycosyl hydrolase-like 10 CDC46_RS21475 PF00691 OmpA family CDC46_RS21475 PF04972 BON domain CDC46_RS21485 PF06761 Intracellular multiplication and human macrophage-killing CDC46_RS21485 PF14331 ImcF-related N-terminal domain CDC46_RS21485 PF06744 Type VI secretion protein IcmF C-terminal CDC46_RS21545 PF03472 Autoinducer binding domain CDC46_RS21545 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS21550 PF00765 Autoinducer synthase CDC46_RS21565 PF00133 tRNA synthetases class I (I, L, M and V) CDC46_RS21565 PF10458 Valyl tRNA synthetase tRNA binding arm CDC46_RS21565 PF08264 Anticodon-binding domain of tRNA CDC46_RS21590 PF00501 AMP-binding enzyme CDC46_RS21595 PF16861 Carbamoyltransferase C-terminus CDC46_RS21595 PF02543 Carbamoyltransferase N-terminus CDC46_RS21610 PF00501 AMP-binding enzyme CDC46_RS21610 PF16197 Ketoacyl-synthetase C-terminal extension CDC46_RS21610 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS21610 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS21610 PF00550 Phosphopantetheine attachment site CDC46_RS21610 PF08659 KR domain CDC46_RS21610 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS21610 PF14765 Polyketide synthase dehydratase CDC46_RS21610 PF00668 Condensation domain CDC46_RS21625 PF00155 Aminotransferase class I and II CDC46_RS21635 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS21640 PF07690 Major Facilitator Superfamily CDC46_RS21655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDC46_RS21655 PF14579 Helix-hairpin-helix motif CDC46_RS21655 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDC46_RS21655 PF02811 PHP domain CDC46_RS21660 PF01381 Helix-turn-helix CDC46_RS21665 PF03600 Citrate transporter CDC46_RS21675 PF03144 Elongation factor Tu domain 2 CDC46_RS21675 PF00009 Elongation factor Tu GTP binding domain CDC46_RS21675 PF03764 Elongation factor G, domain IV CDC46_RS21675 PF14492 Elongation Factor G, domain II CDC46_RS21675 PF00679 Elongation factor G C-terminus CDC46_RS21680 PF13545 Crp-like helix-turn-helix domain CDC46_RS21680 PF00027 Cyclic nucleotide-binding domain CDC46_RS21690 PF00037 4Fe-4S binding domain CDC46_RS21690 PF11953 Domain of unknown function (DUF3470) CDC46_RS21705 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDC46_RS21705 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDC46_RS21710 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS21710 PF00593 TonB dependent receptor CDC46_RS21720 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS21720 PF00563 EAL domain CDC46_RS21720 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS21725 PF06039 Malate:quinone oxidoreductase (Mqo) CDC46_RS21735 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS21735 PF17934 Tetracyclin repressor-like, C-terminal domain CDC46_RS21740 PF02321 Outer membrane efflux protein CDC46_RS21750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS21750 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS21760 PF00892 EamA-like transporter family CDC46_RS21770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS21770 PF03466 LysR substrate binding domain CDC46_RS21785 PF00701 Dihydrodipicolinate synthetase family CDC46_RS21790 PF00171 Aldehyde dehydrogenase family CDC46_RS21795 PF07690 Major Facilitator Superfamily CDC46_RS21800 PF13378 Enolase C-terminal domain-like CDC46_RS21805 PF08666 SAF domain CDC46_RS21805 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDC46_RS21810 PF01370 NAD dependent epimerase/dehydratase family CDC46_RS21815 PF08450 SMP-30/Gluconolactonase/LRE-like region CDC46_RS21820 PF00295 Glycosyl hydrolases family 28 CDC46_RS21825 PF07690 Major Facilitator Superfamily CDC46_RS21830 PF01467 Cytidylyltransferase-like CDC46_RS21830 PF00293 NUDIX domain CDC46_RS21835 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDC46_RS21855 PF02203 Tar ligand binding domain homologue CDC46_RS21855 PF00672 HAMP domain CDC46_RS21855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS21860 PF01464 Transglycosylase SLT domain CDC46_RS21860 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS21905 PF08281 Sigma-70, region 4 CDC46_RS21905 PF04542 Sigma-70 region 2 CDC46_RS21915 PF00072 Response regulator receiver domain CDC46_RS21915 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS21920 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS21920 PF00072 Response regulator receiver domain CDC46_RS21955 PF01313 Bacterial export proteins, family 3 CDC46_RS21960 PF00813 FliP family CDC46_RS21970 PF09483 Type III secretion protein (HpaP) CDC46_RS21975 PF00771 FHIPEP family CDC46_RS21980 PF01312 FlhB HrpN YscU SpaS Family CDC46_RS22010 PF18269 T3SS EscN ATPase C-terminal domain CDC46_RS22010 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDC46_RS22010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDC46_RS22025 PF12833 Helix-turn-helix domain CDC46_RS22030 PF03958 Bacterial type II/III secretion system short domain CDC46_RS22030 PF00263 Bacterial type II and III secretion system protein CDC46_RS22035 PF13855 Leucine rich repeat CDC46_RS22060 PF00295 Glycosyl hydrolases family 28 CDC46_RS22090 PF00120 Glutamine synthetase, catalytic domain CDC46_RS22090 PF03951 Glutamine synthetase, beta-Grasp domain CDC46_RS22095 PF03466 LysR substrate binding domain CDC46_RS22095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS22110 PF00171 Aldehyde dehydrogenase family CDC46_RS22115 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDC46_RS22120 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDC46_RS22125 PF01361 Tautomerase enzyme CDC46_RS22130 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDC46_RS22130 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CDC46_RS22135 PF00682 HMGL-like CDC46_RS22135 PF07836 DmpG-like communication domain CDC46_RS22140 PF07690 Major Facilitator Superfamily CDC46_RS22150 PF13462 Thioredoxin CDC46_RS22160 PF05819 NolX protein CDC46_RS22165 PF00589 Phage integrase family CDC46_RS22165 PF02899 Phage integrase, N-terminal SAM-like domain CDC46_RS22175 PF05199 GMC oxidoreductase CDC46_RS22175 PF00732 GMC oxidoreductase CDC46_RS22205 PF03466 LysR substrate binding domain CDC46_RS22205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS22210 PF01494 FAD binding domain CDC46_RS22215 PF03466 LysR substrate binding domain CDC46_RS22215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS22220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDC46_RS22235 PF04333 MlaA lipoprotein CDC46_RS22245 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS22245 PF00072 Response regulator receiver domain CDC46_RS22300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS22300 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS22305 PF00873 AcrB/AcrD/AcrF family CDC46_RS22320 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS22325 PF00005 ABC transporter CDC46_RS22330 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS22340 PF00106 short chain dehydrogenase CDC46_RS22345 PF03746 LamB/YcsF family CDC46_RS22355 PF02626 Carboxyltransferase domain, subdomain A and B CDC46_RS22360 PF02682 Carboxyltransferase domain, subdomain C and D CDC46_RS22365 PF02785 Biotin carboxylase C-terminal domain CDC46_RS22365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDC46_RS22365 PF00289 Biotin carboxylase, N-terminal domain CDC46_RS22370 PF00364 Biotin-requiring enzyme CDC46_RS22375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS22375 PF03466 LysR substrate binding domain CDC46_RS22380 PF00155 Aminotransferase class I and II CDC46_RS22385 PF03737 Aldolase/RraA CDC46_RS22390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDC46_RS22390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDC46_RS22405 PF00107 Zinc-binding dehydrogenase CDC46_RS22405 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS22410 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CDC46_RS22410 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CDC46_RS22415 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CDC46_RS22425 PF00665 Integrase core domain CDC46_RS22425 PF02796 Helix-turn-helix domain of resolvase CDC46_RS22430 PF01695 IstB-like ATP binding protein CDC46_RS22445 PF13609 Gram-negative porin CDC46_RS22485 PF01814 Hemerythrin HHE cation binding domain CDC46_RS22485 PF04405 Domain of Unknown function (DUF542) CDC46_RS22490 PF00158 Sigma-54 interaction domain CDC46_RS22490 PF02954 Bacterial regulatory protein, Fis family CDC46_RS22495 PF01370 NAD dependent epimerase/dehydratase family CDC46_RS22500 PF00155 Aminotransferase class I and II CDC46_RS22505 PF08671 Anti-repressor SinI CDC46_RS22505 PF01381 Helix-turn-helix CDC46_RS22530 PF08859 DGC domain CDC46_RS22535 PF02036 SCP-2 sterol transfer family CDC46_RS22540 PF01136 Peptidase family U32 CDC46_RS22555 PF07690 Major Facilitator Superfamily CDC46_RS22560 PF07690 Major Facilitator Superfamily CDC46_RS22570 PF13247 4Fe-4S dicluster domain CDC46_RS22570 PF14711 Respiratory nitrate reductase beta C-terminal CDC46_RS22575 PF02613 Nitrate reductase delta subunit CDC46_RS22580 PF02665 Nitrate reductase gamma subunit CDC46_RS22585 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CDC46_RS22590 PF00672 HAMP domain CDC46_RS22590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS22590 PF07730 Histidine kinase CDC46_RS22590 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CDC46_RS22595 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS22595 PF00072 Response regulator receiver domain CDC46_RS22615 PF02581 Thiamine monophosphate synthase CDC46_RS22625 PF00465 Iron-containing alcohol dehydrogenase CDC46_RS22640 PF02630 SCO1/SenC CDC46_RS22645 PF00034 Cytochrome c CDC46_RS22660 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS22665 PF17760 UvrA interaction domain CDC46_RS22665 PF00005 ABC transporter CDC46_RS22665 PF17755 UvrA DNA-binding domain CDC46_RS22670 PF00375 Sodium:dicarboxylate symporter family CDC46_RS22675 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC46_RS22680 PF03466 LysR substrate binding domain CDC46_RS22680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS22710 PF02719 Polysaccharide biosynthesis protein CDC46_RS22720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDC46_RS22725 PF17836 PglD N-terminal domain CDC46_RS22725 PF14602 Hexapeptide repeat of succinyl-transferase CDC46_RS22725 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS22730 PF02397 Bacterial sugar transferase CDC46_RS22745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDC46_RS22745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDC46_RS22750 PF12464 Maltose acetyltransferase CDC46_RS22750 PF14602 Hexapeptide repeat of succinyl-transferase CDC46_RS22770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDC46_RS22770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDC46_RS22770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDC46_RS22775 PF02350 UDP-N-acetylglucosamine 2-epimerase CDC46_RS22780 PF13614 AAA domain CDC46_RS22780 PF02706 Chain length determinant protein CDC46_RS22780 PF13807 G-rich domain on putative tyrosine kinase CDC46_RS22785 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDC46_RS22790 PF10531 SLBB domain CDC46_RS22790 PF02563 Polysaccharide biosynthesis/export protein CDC46_RS22835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS22835 PF02203 Tar ligand binding domain homologue CDC46_RS22835 PF00672 HAMP domain CDC46_RS22870 PF10005 zinc-ribbon domain CDC46_RS22870 PF15887 Putative zinc-binding metallo-peptidase CDC46_RS22885 PF05114 Protein of unknown function (DUF692) CDC46_RS22895 PF07681 DoxX CDC46_RS22910 PF00873 AcrB/AcrD/AcrF family CDC46_RS22915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS22920 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS22920 PF00072 Response regulator receiver domain CDC46_RS22925 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS22925 PF00672 HAMP domain CDC46_RS22945 PF07690 Major Facilitator Superfamily CDC46_RS22960 PF02634 FdhD/NarQ family CDC46_RS22965 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS22965 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS22965 PF00563 EAL domain CDC46_RS22965 PF13188 PAS domain CDC46_RS22970 PF02705 K+ potassium transporter CDC46_RS22975 PF00313 'Cold-shock' DNA-binding domain CDC46_RS22985 PF00171 Aldehyde dehydrogenase family CDC46_RS22990 PF00202 Aminotransferase class-III CDC46_RS22995 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS22995 PF00155 Aminotransferase class I and II CDC46_RS23000 PF06314 Acetoacetate decarboxylase (ADC) CDC46_RS23015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDC46_RS23015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDC46_RS23020 PF00593 TonB dependent receptor CDC46_RS23020 PF07715 TonB-dependent Receptor Plug Domain CDC46_RS23060 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CDC46_RS23060 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS23060 PF05594 Haemagluttinin repeat CDC46_RS23060 PF13332 Hemagglutinin repeat CDC46_RS23060 PF05860 haemagglutination activity domain CDC46_RS23070 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS23070 PF13332 Hemagglutinin repeat CDC46_RS23070 PF05860 haemagglutination activity domain CDC46_RS23070 PF04829 Pre-toxin domain with VENN motif CDC46_RS23075 PF02794 RTX toxin acyltransferase family CDC46_RS23080 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CDC46_RS23080 PF08479 POTRA domain, ShlB-type CDC46_RS23080 PF17287 POTRA domain CDC46_RS23090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDC46_RS23090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDC46_RS23110 PF00072 Response regulator receiver domain CDC46_RS23110 PF02954 Bacterial regulatory protein, Fis family CDC46_RS23110 PF00158 Sigma-54 interaction domain CDC46_RS23140 PF00437 Type II/IV secretion system protein CDC46_RS23150 PF04972 BON domain CDC46_RS23150 PF00263 Bacterial type II and III secretion system protein CDC46_RS23150 PF13629 Pilus formation protein N terminal region CDC46_RS23190 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS23190 PF00072 Response regulator receiver domain CDC46_RS23195 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS23195 PF00563 EAL domain CDC46_RS23195 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS23205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS23205 PF08269 Cache domain CDC46_RS23215 PF16363 GDP-mannose 4,6 dehydratase CDC46_RS23220 PF00589 Phage integrase family CDC46_RS23220 PF02899 Phage integrase, N-terminal SAM-like domain CDC46_RS23225 PF02358 Trehalose-phosphatase CDC46_RS23230 PF00982 Glycosyltransferase family 20 CDC46_RS23235 PF01047 MarR family CDC46_RS23240 PF02566 OsmC-like protein CDC46_RS23245 PF07859 alpha/beta hydrolase fold CDC46_RS23255 PF03466 LysR substrate binding domain CDC46_RS23255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS23260 PF07859 alpha/beta hydrolase fold CDC46_RS23265 PF13533 Biotin-lipoyl like CDC46_RS23270 PF00873 AcrB/AcrD/AcrF family CDC46_RS23275 PF02321 Outer membrane efflux protein CDC46_RS23280 PF12833 Helix-turn-helix domain CDC46_RS23305 PF01638 HxlR-like helix-turn-helix CDC46_RS23310 PF01575 MaoC like domain CDC46_RS23315 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS23320 PF12706 Beta-lactamase superfamily domain CDC46_RS23325 PF00106 short chain dehydrogenase CDC46_RS23330 PF08240 Alcohol dehydrogenase GroES-like domain CDC46_RS23330 PF00107 Zinc-binding dehydrogenase CDC46_RS23335 PF03466 LysR substrate binding domain CDC46_RS23335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS23345 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDC46_RS23365 PF05076 Suppressor of fused protein (SUFU) CDC46_RS23385 PF01609 Transposase DDE domain CDC46_RS23385 PF05598 Transposase domain (DUF772) CDC46_RS23405 PF04717 Type VI secretion system, phage-baseplate injector CDC46_RS23410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS23415 PF00072 Response regulator receiver domain CDC46_RS23415 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS23420 PF00072 Response regulator receiver domain CDC46_RS23420 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS23425 PF04960 Glutaminase CDC46_RS23430 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS23435 PF00005 ABC transporter CDC46_RS23435 PF08402 TOBE domain CDC46_RS23440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS23440 PF03466 LysR substrate binding domain CDC46_RS23470 PF01361 Tautomerase enzyme CDC46_RS23480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS23480 PF03459 TOBE domain CDC46_RS23490 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS23490 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS23490 PF00563 EAL domain CDC46_RS23510 PF06906 Protein of unknown function (DUF1272) CDC46_RS23525 PF00072 Response regulator receiver domain CDC46_RS23525 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS23530 PF00672 HAMP domain CDC46_RS23530 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS23530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS23555 PF05199 GMC oxidoreductase CDC46_RS23580 PF03741 Integral membrane protein TerC family CDC46_RS23580 PF03471 Transporter associated domain CDC46_RS23585 PF03150 Di-haem cytochrome c peroxidase CDC46_RS23590 PF04185 Phosphoesterase family CDC46_RS23615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS23615 PF01627 Hpt domain CDC46_RS23615 PF00989 PAS fold CDC46_RS23615 PF00072 Response regulator receiver domain CDC46_RS23615 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS23615 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS23625 PF05598 Transposase domain (DUF772) CDC46_RS23625 PF01609 Transposase DDE domain CDC46_RS23645 PF00005 ABC transporter CDC46_RS23645 PF03412 Peptidase C39 family CDC46_RS23645 PF00664 ABC transporter transmembrane region CDC46_RS23650 PF00529 HlyD membrane-fusion protein of T1SS CDC46_RS23665 PF01380 SIS domain CDC46_RS23665 PF01418 Helix-turn-helix domain, rpiR family CDC46_RS23665 PF02685 Glucokinase CDC46_RS23670 PF07969 Amidohydrolase family CDC46_RS23680 PF02447 GntP family permease CDC46_RS23685 PF01081 KDPG and KHG aldolase CDC46_RS23690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDC46_RS23695 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS23695 PF00072 Response regulator receiver domain CDC46_RS23700 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CDC46_RS23710 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS23710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS23710 PF00672 HAMP domain CDC46_RS23715 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS23715 PF00072 Response regulator receiver domain CDC46_RS23720 PF13533 Biotin-lipoyl like CDC46_RS23725 PF00873 AcrB/AcrD/AcrF family CDC46_RS23730 PF00873 AcrB/AcrD/AcrF family CDC46_RS23750 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS23750 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS23750 PF00563 EAL domain CDC46_RS23765 PF02322 Cytochrome bd terminal oxidase subunit II CDC46_RS23770 PF01654 Cytochrome bd terminal oxidase subunit I CDC46_RS23775 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS23775 PF03707 Bacterial signalling protein N terminal repeat CDC46_RS23775 PF13188 PAS domain CDC46_RS23775 PF00563 EAL domain CDC46_RS23780 PF02203 Tar ligand binding domain homologue CDC46_RS23780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS23780 PF00672 HAMP domain CDC46_RS23790 PF13396 Phospholipase_D-nuclease N-terminal CDC46_RS23790 PF13091 PLD-like domain CDC46_RS23800 PF01554 MatE CDC46_RS23830 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDC46_RS23830 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDC46_RS23830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC46_RS23830 PF04324 BFD-like [2Fe-2S] binding domain CDC46_RS23830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS23835 PF13806 Rieske-like [2Fe-2S] domain CDC46_RS23840 PF04324 BFD-like [2Fe-2S] binding domain CDC46_RS23840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDC46_RS23840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDC46_RS23840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS23840 PF18267 Rubredoxin NAD+ reductase C-terminal domain CDC46_RS23845 PF07690 Major Facilitator Superfamily CDC46_RS23850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS23850 PF08447 PAS fold CDC46_RS23865 PF00296 Luciferase-like monooxygenase CDC46_RS23880 PF08386 TAP-like protein CDC46_RS23880 PF00561 alpha/beta hydrolase fold CDC46_RS23885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC46_RS23890 PF03737 Aldolase/RraA CDC46_RS23895 PF00155 Aminotransferase class I and II CDC46_RS23900 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC46_RS23900 PF03737 Aldolase/RraA CDC46_RS23910 PF03466 LysR substrate binding domain CDC46_RS23910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS23935 PF13406 Transglycosylase SLT domain CDC46_RS23945 PF01654 Cytochrome bd terminal oxidase subunit I CDC46_RS23950 PF02322 Cytochrome bd terminal oxidase subunit II CDC46_RS23955 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDC46_RS23955 PF02558 Ketopantoate reductase PanE/ApbA CDC46_RS23970 PF12833 Helix-turn-helix domain CDC46_RS24010 PF07690 Major Facilitator Superfamily CDC46_RS24015 PF03466 LysR substrate binding domain CDC46_RS24015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS24020 PF02525 Flavodoxin-like fold CDC46_RS24040 PF00890 FAD binding domain CDC46_RS24040 PF02910 Fumarate reductase flavoprotein C-term CDC46_RS24045 PF01925 Sulfite exporter TauE/SafE CDC46_RS24050 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS24050 PF00501 AMP-binding enzyme CDC46_RS24060 PF03466 LysR substrate binding domain CDC46_RS24060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS24065 PF01925 Sulfite exporter TauE/SafE CDC46_RS24100 PF05552 Conserved TM helix CDC46_RS24105 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CDC46_RS24110 PF13361 UvrD-like helicase C-terminal domain CDC46_RS24110 PF00580 UvrD/REP helicase N-terminal domain CDC46_RS24125 PF07690 Major Facilitator Superfamily CDC46_RS24130 PF10415 Fumarase C C-terminus CDC46_RS24130 PF00206 Lyase CDC46_RS24145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDC46_RS24145 PF00381 PTS HPr component phosphorylation site CDC46_RS24145 PF02896 PEP-utilising enzyme, TIM barrel domain CDC46_RS24145 PF05524 PEP-utilising enzyme, N-terminal CDC46_RS24145 PF00391 PEP-utilising enzyme, mobile domain CDC46_RS24150 PF02264 LamB porin CDC46_RS24155 PF00251 Glycosyl hydrolases family 32 N-terminal domain CDC46_RS24155 PF08244 Glycosyl hydrolases family 32 C terminal CDC46_RS24160 PF02378 Phosphotransferase system, EIIC CDC46_RS24160 PF00367 phosphotransferase system, EIIB CDC46_RS24165 PF00356 Bacterial regulatory proteins, lacI family CDC46_RS24170 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CDC46_RS24170 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS24175 PF05567 Neisseria PilC beta-propeller domain CDC46_RS24195 PF00114 Pilin (bacterial filament) CDC46_RS24195 PF07963 Prokaryotic N-terminal methylation motif CDC46_RS24205 PF02675 S-adenosylmethionine decarboxylase CDC46_RS24225 PF03994 Domain of Unknown Function (DUF350) CDC46_RS24230 PF13458 Periplasmic binding protein CDC46_RS24265 PF03527 RHS protein CDC46_RS24265 PF05593 RHS Repeat CDC46_RS24285 PF01738 Dienelactone hydrolase family CDC46_RS24335 PF01042 Endoribonuclease L-PSP CDC46_RS24340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC46_RS24345 PF01037 Lrp/AsnC ligand binding domain CDC46_RS24350 PF01022 Bacterial regulatory protein, arsR family CDC46_RS24365 PF01810 LysE type translocator CDC46_RS24370 PF01042 Endoribonuclease L-PSP CDC46_RS24385 PF03466 LysR substrate binding domain CDC46_RS24385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS24390 PF01063 Amino-transferase class IV CDC46_RS24395 PF07690 Major Facilitator Superfamily CDC46_RS24425 PF03527 RHS protein CDC46_RS24425 PF05593 RHS Repeat CDC46_RS24445 PF01738 Dienelactone hydrolase family CDC46_RS24495 PF01042 Endoribonuclease L-PSP CDC46_RS24500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC46_RS24505 PF01037 Lrp/AsnC ligand binding domain CDC46_RS24510 PF01022 Bacterial regulatory protein, arsR family CDC46_RS24525 PF01810 LysE type translocator CDC46_RS24530 PF01042 Endoribonuclease L-PSP CDC46_RS24545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS24545 PF03466 LysR substrate binding domain CDC46_RS24550 PF01063 Amino-transferase class IV CDC46_RS24555 PF07690 Major Facilitator Superfamily CDC46_RS24570 PF02203 Tar ligand binding domain homologue CDC46_RS24570 PF00672 HAMP domain CDC46_RS24570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS24575 PF16078 2-oxoglutarate dehydrogenase N-terminus CDC46_RS24575 PF16870 2-oxoglutarate dehydrogenase C-terminal CDC46_RS24575 PF02779 Transketolase, pyrimidine binding domain CDC46_RS24575 PF00676 Dehydrogenase E1 component CDC46_RS24580 PF01553 Acyltransferase CDC46_RS24595 PF18793 Nitrous oxide reductase propeller repeat 2 CDC46_RS24595 PF18764 Nitrous oxide reductase propeller repeat CDC46_RS24595 PF13473 Cupredoxin-like domain CDC46_RS24600 PF04205 FMN-binding domain CDC46_RS24600 PF12801 4Fe-4S binding domain CDC46_RS24605 PF05048 Periplasmic copper-binding protein (NosD) CDC46_RS24610 PF00005 ABC transporter CDC46_RS24615 PF12679 ABC-2 family transporter protein CDC46_RS24620 PF05573 NosL CDC46_RS24640 PF01037 Lrp/AsnC ligand binding domain CDC46_RS24655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDC46_RS24655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDC46_RS24660 PF08274 PhnA Zinc-Ribbon CDC46_RS24660 PF03831 PhnA domain CDC46_RS24670 PF09084 NMT1/THI5 like CDC46_RS24680 PF02325 YGGT family CDC46_RS24695 PF12706 Beta-lactamase superfamily domain CDC46_RS24700 PF04545 Sigma-70, region 4 CDC46_RS24700 PF04539 Sigma-70 region 3 CDC46_RS24700 PF04542 Sigma-70 region 2 CDC46_RS24715 PF00771 FHIPEP family CDC46_RS24720 PF01312 FlhB HrpN YscU SpaS Family CDC46_RS24725 PF00440 Bacterial regulatory proteins, tetR family CDC46_RS24725 PF17938 Tetracyclin repressor-like, C-terminal domain CDC46_RS24730 PF07690 Major Facilitator Superfamily CDC46_RS24735 PF01220 Dehydroquinase class II CDC46_RS24740 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDC46_RS24740 PF08501 Shikimate dehydrogenase substrate binding domain CDC46_RS24745 PF13609 Gram-negative porin CDC46_RS24750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDC46_RS24750 PF01261 Xylose isomerase-like TIM barrel CDC46_RS24755 PF04344 Chemotaxis phosphatase, CheZ CDC46_RS24760 PF00072 Response regulator receiver domain CDC46_RS24765 PF00072 Response regulator receiver domain CDC46_RS24765 PF01339 CheB methylesterase CDC46_RS24770 PF03975 CheD chemotactic sensory transduction CDC46_RS24775 PF03705 CheR methyltransferase, all-alpha domain CDC46_RS24775 PF01739 CheR methyltransferase, SAM binding domain CDC46_RS24780 PF00672 HAMP domain CDC46_RS24780 PF02203 Tar ligand binding domain homologue CDC46_RS24780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDC46_RS24785 PF01584 CheW-like domain CDC46_RS24790 PF01627 Hpt domain CDC46_RS24790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS24790 PF02895 Signal transducing histidine kinase, homodimeric domain CDC46_RS24790 PF01584 CheW-like domain CDC46_RS24790 PF09078 CheY binding CDC46_RS24795 PF00072 Response regulator receiver domain CDC46_RS24800 PF00691 OmpA family CDC46_RS24800 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDC46_RS24805 PF01618 MotA/TolQ/ExbB proton channel family CDC46_RS24810 PF05280 Flagellar transcriptional activator (FlhC) CDC46_RS24815 PF05247 Flagellar transcriptional activator (FlhD) CDC46_RS24830 PF07690 Major Facilitator Superfamily CDC46_RS24835 PF12697 Alpha/beta hydrolase family CDC46_RS24840 PF00109 Beta-ketoacyl synthase, N-terminal domain CDC46_RS24840 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS24840 PF14765 Polyketide synthase dehydratase CDC46_RS24840 PF00550 Phosphopantetheine attachment site CDC46_RS24840 PF08659 KR domain CDC46_RS24840 PF02801 Beta-ketoacyl synthase, C-terminal domain CDC46_RS24840 PF00501 AMP-binding enzyme CDC46_RS24840 PF16197 Ketoacyl-synthetase C-terminal extension CDC46_RS24840 PF00668 Condensation domain CDC46_RS24845 PF02515 CoA-transferase family III CDC46_RS24850 PF00668 Condensation domain CDC46_RS24850 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS24850 PF00501 AMP-binding enzyme CDC46_RS24850 PF00550 Phosphopantetheine attachment site CDC46_RS24855 PF01494 FAD binding domain CDC46_RS24860 PF00202 Aminotransferase class-III CDC46_RS24865 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CDC46_RS24895 PF01266 FAD dependent oxidoreductase CDC46_RS24895 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CDC46_RS24910 PF13193 AMP-binding enzyme C-terminal domain CDC46_RS24910 PF00550 Phosphopantetheine attachment site CDC46_RS24910 PF00501 AMP-binding enzyme CDC46_RS24930 PF01588 Putative tRNA binding domain CDC46_RS24930 PF09334 tRNA synthetases class I (M) CDC46_RS24935 PF06426 Serine acetyltransferase, N-terminal CDC46_RS24935 PF00132 Bacterial transferase hexapeptide (six repeats) CDC46_RS24950 PF00672 HAMP domain CDC46_RS24950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS24950 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS24955 PF00072 Response regulator receiver domain CDC46_RS24955 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS24985 PF02887 Pyruvate kinase, alpha/beta domain CDC46_RS24985 PF00224 Pyruvate kinase, barrel domain CDC46_RS24990 PF05161 MOFRL family CDC46_RS24990 PF13660 Domain of unknown function (DUF4147) CDC46_RS24995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS24995 PF03466 LysR substrate binding domain CDC46_RS25005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS25005 PF16527 Two-component sensor protein CpxA, periplasmic domain CDC46_RS25005 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS25005 PF00672 HAMP domain CDC46_RS25010 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS25010 PF00072 Response regulator receiver domain CDC46_RS25015 PF02321 Outer membrane efflux protein CDC46_RS25025 PF00873 AcrB/AcrD/AcrF family CDC46_RS25030 PF13382 Adenine deaminase C-terminal domain CDC46_RS25030 PF01979 Amidohydrolase family CDC46_RS25055 PF00005 ABC transporter CDC46_RS25060 PF12704 MacB-like periplasmic core domain CDC46_RS25060 PF02687 FtsX-like permease family CDC46_RS25060 PF00005 ABC transporter CDC46_RS25095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS25095 PF03466 LysR substrate binding domain CDC46_RS25105 PF00248 Aldo/keto reductase family CDC46_RS25135 PF03466 LysR substrate binding domain CDC46_RS25135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS25155 PF00691 OmpA family CDC46_RS25165 PF00561 alpha/beta hydrolase fold CDC46_RS25180 PF02543 Carbamoyltransferase N-terminus CDC46_RS25180 PF16861 Carbamoyltransferase C-terminus CDC46_RS25195 PF02543 Carbamoyltransferase N-terminus CDC46_RS25195 PF16861 Carbamoyltransferase C-terminus CDC46_RS25210 PF03358 NADPH-dependent FMN reductase CDC46_RS25215 PF02254 TrkA-N domain CDC46_RS25215 PF00999 Sodium/hydrogen exchanger family CDC46_RS25250 PF07732 Multicopper oxidase CDC46_RS25260 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS25265 PF07702 UTRA domain CDC46_RS25265 PF00392 Bacterial regulatory proteins, gntR family CDC46_RS25270 PF00005 ABC transporter CDC46_RS25275 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS25290 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS25290 PF00072 Response regulator receiver domain CDC46_RS25310 PF03466 LysR substrate binding domain CDC46_RS25310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS25315 PF01042 Endoribonuclease L-PSP CDC46_RS25320 PF00291 Pyridoxal-phosphate dependent enzyme CDC46_RS25325 PF13309 HTH domain CDC46_RS25325 PF08348 YheO-like PAS domain CDC46_RS25335 PF01740 STAS domain CDC46_RS25335 PF00916 Sulfate permease family CDC46_RS25350 PF03706 Lysylphosphatidylglycerol synthase TM region CDC46_RS25350 PF09924 Uncharacterised conserved protein (DUF2156) CDC46_RS25360 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS25360 PF00072 Response regulator receiver domain CDC46_RS25365 PF01694 Rhomboid family CDC46_RS25385 PF03171 2OG-Fe(II) oxygenase superfamily CDC46_RS25385 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CDC46_RS25390 PF07732 Multicopper oxidase CDC46_RS25390 PF07731 Multicopper oxidase CDC46_RS25410 PF13145 PPIC-type PPIASE domain CDC46_RS25415 PF08479 POTRA domain, ShlB-type CDC46_RS25415 PF17287 POTRA domain CDC46_RS25415 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CDC46_RS25455 PF15526 Novel toxin 21 CDC46_RS25455 PF05860 haemagglutination activity domain CDC46_RS25455 PF05594 Haemagluttinin repeat CDC46_RS25455 PF04829 Pre-toxin domain with VENN motif CDC46_RS25455 PF13332 Hemagglutinin repeat CDC46_RS25465 PF01610 Transposase CDC46_RS25465 PF13542 Helix-turn-helix domain of transposase family ISL3 CDC46_RS25465 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CDC46_RS25490 PF13180 PDZ domain CDC46_RS25495 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS25495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS25495 PF08521 Two-component sensor kinase N-terminal CDC46_RS25500 PF00072 Response regulator receiver domain CDC46_RS25500 PF00486 Transcriptional regulatory protein, C terminal CDC46_RS25505 PF05819 NolX protein CDC46_RS25510 PF02685 Glucokinase CDC46_RS25510 PF01380 SIS domain CDC46_RS25510 PF01418 Helix-turn-helix domain, rpiR family CDC46_RS25515 PF02685 Glucokinase CDC46_RS25520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDC46_RS25525 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CDC46_RS25525 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CDC46_RS25530 PF00920 Dehydratase family CDC46_RS25535 PF00582 Universal stress protein family CDC46_RS25550 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CDC46_RS25555 PF00115 Cytochrome C and Quinol oxidase polypeptide I CDC46_RS25565 PF00510 Cytochrome c oxidase subunit III CDC46_RS25590 PF07690 Major Facilitator Superfamily CDC46_RS25600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS25600 PF03466 LysR substrate binding domain CDC46_RS25605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDC46_RS25615 PF00528 Binding-protein-dependent transport system inner membrane component CDC46_RS25620 PF00491 Arginase family CDC46_RS25625 PF00196 Bacterial regulatory proteins, luxR family CDC46_RS25625 PF03472 Autoinducer binding domain CDC46_RS25640 PF06628 Catalase-related immune-responsive CDC46_RS25640 PF00199 Catalase CDC46_RS25655 PF01053 Cys/Met metabolism PLP-dependent enzyme CDC46_RS25665 PF13936 Helix-turn-helix domain CDC46_RS25665 PF00665 Integrase core domain CDC46_RS25670 PF01266 FAD dependent oxidoreductase CDC46_RS25670 PF05690 Thiazole biosynthesis protein ThiG CDC46_RS25675 PF00171 Aldehyde dehydrogenase family CDC46_RS25680 PF13458 Periplasmic binding protein CDC46_RS25685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDC46_RS25685 PF03466 LysR substrate binding domain CDC46_RS25690 PF13609 Gram-negative porin CDC46_RS25695 PF07690 Major Facilitator Superfamily CDC46_RS25705 PF00873 AcrB/AcrD/AcrF family CDC46_RS25710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDC46_RS25715 PF02321 Outer membrane efflux protein CDC46_RS25770 PF00171 Aldehyde dehydrogenase family CDC46_RS25775 PF00180 Isocitrate/isopropylmalate dehydrogenase CDC46_RS25780 PF03328 HpcH/HpaI aldolase/citrate lyase family CDC46_RS25785 PF07690 Major Facilitator Superfamily CDC46_RS25790 PF08666 SAF domain CDC46_RS25790 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDC46_RS25800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CDC46_RS25800 PF00356 Bacterial regulatory proteins, lacI family CDC46_RS25805 PF02195 ParB-like nuclease domain CDC46_RS25815 PF11922 Domain of unknown function (DUF3440) CDC46_RS25815 PF01507 Phosphoadenosine phosphosulfate reductase family CDC46_RS25820 PF03895 YadA-like membrane anchor domain CDC46_RS25820 PF05658 Head domain of trimeric autotransporter adhesin CDC46_RS25820 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS25820 PF05662 Coiled stalk of trimeric autotransporter adhesin CDC46_RS25820 PF13018 Extended Signal Peptide of Type V secretion system CDC46_RS25820 PF03895 YadA-like membrane anchor domain CDC46_RS25820 PF05658 Head domain of trimeric autotransporter adhesin CDC46_RS25820 PF05662 Coiled stalk of trimeric autotransporter adhesin CDC46_RS25830 PF09456 RcsC Alpha-Beta-Loop (ABL) CDC46_RS25830 PF00072 Response regulator receiver domain CDC46_RS25830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS25830 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS25835 PF00563 EAL domain CDC46_RS25835 PF01590 GAF domain CDC46_RS25835 PF00360 Phytochrome region CDC46_RS25835 PF00990 Diguanylate cyclase, GGDEF domain CDC46_RS25840 PF13683 Integrase core domain CDC46_RS25840 PF13276 HTH-like domain CDC46_RS25855 PF13683 Integrase core domain CDC46_RS25855 PF13276 HTH-like domain CDC46_RS25865 PF04966 Carbohydrate-selective porin, OprB family CDC46_RS25870 PF13407 Periplasmic binding protein domain CDC46_RS25875 PF00005 ABC transporter CDC46_RS25880 PF02653 Branched-chain amino acid transport system / permease component CDC46_RS25890 PF00356 Bacterial regulatory proteins, lacI family CDC46_RS25920 PF03929 PepSY-associated TM region CDC46_RS25935 PF01739 CheR methyltransferase, SAM binding domain CDC46_RS25950 PF04542 Sigma-70 region 2 CDC46_RS25950 PF08281 Sigma-70, region 4 CDC46_RS25990 PF00550 Phosphopantetheine attachment site CDC46_RS26000 PF03144 Elongation factor Tu domain 2 CDC46_RS26000 PF00009 Elongation factor Tu GTP binding domain CDC46_RS26000 PF16658 Class II release factor RF3, C-terminal domain CDC46_RS26025 PF00158 Sigma-54 interaction domain CDC46_RS26025 PF00072 Response regulator receiver domain CDC46_RS26025 PF02954 Bacterial regulatory protein, Fis family CDC46_RS26030 PF01590 GAF domain CDC46_RS26030 PF02954 Bacterial regulatory protein, Fis family CDC46_RS26030 PF00158 Sigma-54 interaction domain CDC46_RS26040 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDC46_RS26040 PF04552 Sigma-54, DNA binding domain CDC46_RS26040 PF04963 Sigma-54 factor, core binding domain CDC46_RS26065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDC46_RS26065 PF00512 His Kinase A (phospho-acceptor) domain CDC46_RS26075 PF00860 Permease family