locus-tag	class	description
LBM341_RS00035	COG2189	Belongs to the N(4) N(6)-methyltransferase family
LBM341_RS00055	COG3609	addiction module antidote protein, CC2985 family
LBM341_RS00110	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LBM341_RS00110	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
LBM341_RS00110	COG1703	isobutyryl-CoA mutase activity
LBM341_RS00140	COG0583	DNA-binding transcription factor activity
LBM341_RS00145	COG1250	3-hydroxyacyl-CoA dehydrogenase
LBM341_RS00160	COG3039	Transposase
LBM341_RS00190	COG0596	Alpha beta hydrolase
LBM341_RS00220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LBM341_RS00235	COG4770	biotin carboxylase activity
LBM341_RS00240	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LBM341_RS00245	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LBM341_RS00250	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LBM341_RS00255	COG3012	SEC-C Motif Domain Protein
LBM341_RS00260	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LBM341_RS00275	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS00280	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS00285	COG0183	Belongs to the thiolase family
LBM341_RS00290	COG0288	reversible hydration of carbon dioxide
LBM341_RS00295	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
LBM341_RS00300	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS00305	COG0789	Transcriptional regulator
LBM341_RS00315	COG2329	Antibiotic biosynthesis monooxygenase
LBM341_RS00350	COG3039	Transposase
LBM341_RS00360	COG4221	oxidoreductase activity
LBM341_RS00365	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LBM341_RS00375	COG0018	arginyl-trna synthetase
LBM341_RS00400	COG2197	response regulator
LBM341_RS00410	COG1410	methionine synthase
LBM341_RS00410	COG0646	methionine synthase
LBM341_RS00430	COG2267	carboxylic ester hydrolase activity
LBM341_RS00460	COG1024	Enoyl-CoA hydratase
LBM341_RS00485	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LBM341_RS00495	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LBM341_RS00500	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
LBM341_RS00500	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
LBM341_RS00505	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LBM341_RS00545	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LBM341_RS00550	COG0321	lipoyl(octanoyl) transferase activity
LBM341_RS00560	COG0583	DNA-binding transcription factor activity
LBM341_RS00565	COG2921	Belongs to the UPF0250 family
LBM341_RS00570	COG1686	Belongs to the peptidase S11 family
LBM341_RS00580	COG3411	Ferredoxin
LBM341_RS00585	COG1301	dicarboxylic acid transport
LBM341_RS00590	COG4191	Histidine kinase
LBM341_RS00595	COG2204	response regulator
LBM341_RS00605	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
LBM341_RS00710	COG3039	Transposase
LBM341_RS00745	COG3039	Transposase
LBM341_RS00790	COG0004	ammonium transporteR
LBM341_RS00800	COG0189	ligase activity
LBM341_RS00810	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LBM341_RS00815	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LBM341_RS00835	COG0793	Belongs to the peptidase S41A family
LBM341_RS00840	COG0588	phosphoglycerate mutase activity
LBM341_RS00845	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LBM341_RS00850	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LBM341_RS00855	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
LBM341_RS00860	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LBM341_RS00870	COG1040	competence protein
LBM341_RS00875	COG2226	methyltransferase
LBM341_RS00890	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LBM341_RS00895	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
LBM341_RS00925	COG1612	heme a metabolic process
LBM341_RS00930	COG0109	protoheme IX farnesyltransferase activity
LBM341_RS00935	COG1999	signal sequence binding
LBM341_RS00940	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LBM341_RS00955	COG1741	Belongs to the pirin family
LBM341_RS00960	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LBM341_RS00965	COG1116	anion transmembrane transporter activity
LBM341_RS00970	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LBM341_RS00975	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LBM341_RS00980	COG3707	response regulator
LBM341_RS00990	COG0625	glutathione transferase activity
LBM341_RS01005	COG0612	Peptidase, M16
LBM341_RS01010	COG0612	Peptidase, M16
LBM341_RS01015	COG3385	transposase activity
LBM341_RS01020	COG0742	ribosomal rna small subunit methyltransferase
LBM341_RS01025	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LBM341_RS01030	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LBM341_RS01040	COG0193	aminoacyl-tRNA hydrolase activity
LBM341_RS01045	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LBM341_RS01050	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LBM341_RS01060	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LBM341_RS01065	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
LBM341_RS01075	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LBM341_RS01085	COG1194	a g-specific adenine glycosylase
LBM341_RS01095	COG1660	Displays ATPase and GTPase activities
LBM341_RS01105	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LBM341_RS01115	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LBM341_RS01120	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LBM341_RS01125	COG1137	ATPase activity
LBM341_RS01140	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LBM341_RS01160	COG0693	protein deglycase activity
LBM341_RS01165	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LBM341_RS01170	COG1280	lysine exporter protein (LysE YggA)
LBM341_RS01185	COG2814	Major facilitator Superfamily
LBM341_RS01190	COG0629	single-stranded DNA binding
LBM341_RS01195	COG3039	Transposase
LBM341_RS01235	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LBM341_RS01260	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LBM341_RS01275	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS01290	COG2391	methyltransferase activity
LBM341_RS01305	COG3265	gluconokinase activity
LBM341_RS01310	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS01340	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LBM341_RS01340	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LBM341_RS01345	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LBM341_RS01360	COG0700	Nucleoside recognition
LBM341_RS01365	COG1238	metal cluster binding
LBM341_RS01380	COG4178	(ABC) transporter
LBM341_RS01390	COG2226	methyltransferase
LBM341_RS01405	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LBM341_RS01430	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LBM341_RS01440	COG0494	nUDIX hydrolase
LBM341_RS01445	COG3568	Endonuclease Exonuclease Phosphatase
LBM341_RS01450	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LBM341_RS01465	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS01470	COG1024	Enoyl-CoA hydratase
LBM341_RS01470	COG1250	3-hydroxyacyl-CoA dehydrogenase
LBM341_RS01475	COG0183	Belongs to the thiolase family
LBM341_RS01480	COG1024	Enoyl-CoA hydratase
LBM341_RS01490	COG5265	(ABC) transporter
LBM341_RS01500	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LBM341_RS01510	COG0765	amino acid transport
LBM341_RS01515	COG0765	amino acid transport
LBM341_RS01520	COG1126	abc transporter atp-binding protein
LBM341_RS01525	COG0121	glutamine amidotransferase
LBM341_RS01530	COG0473	3-isopropylmalate dehydrogenase activity
LBM341_RS01540	COG0418	dihydroorotase activity
LBM341_RS01560	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LBM341_RS01565	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LBM341_RS01580	COG0316	Belongs to the HesB IscA family
LBM341_RS01585	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
LBM341_RS01590	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LBM341_RS01595	COG1490	D-aminoacyl-tRNA deacylase activity
LBM341_RS01610	COG2255	four-way junction helicase activity
LBM341_RS01615	COG0632	four-way junction helicase activity
LBM341_RS01625	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LBM341_RS01630	COG0138	bifunctional purine biosynthesis protein purh
LBM341_RS01635	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
LBM341_RS01655	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LBM341_RS01660	COG0006	proline dipeptidase activity
LBM341_RS01670	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LBM341_RS01690	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
LBM341_RS01695	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LBM341_RS01700	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
LBM341_RS01705	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LBM341_RS01710	COG0697	spore germination
LBM341_RS01715	COG0346	lactoylglutathione lyase activity
LBM341_RS01725	COG0204	Acyl-transferase
LBM341_RS01730	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LBM341_RS01735	COG0751	glycine-tRNA ligase activity
LBM341_RS01745	COG0752	glycyl-tRNA synthetase alpha subunit
LBM341_RS01750	COG0815	Transfers the fatty acyl group on membrane lipoproteins
LBM341_RS01755	COG4535	Mg2 and Co2 transporter CorC
LBM341_RS01760	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LBM341_RS01765	COG1702	phosphate starvation-inducible protein PhoH
LBM341_RS01770	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LBM341_RS01790	COG3039	Transposase
LBM341_RS01800	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS01825	COG0513	Belongs to the DEAD box helicase family
LBM341_RS01870	COG0477	Major facilitator Superfamily
LBM341_RS01880	COG0642	Histidine kinase
LBM341_RS01890	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LBM341_RS01895	COG2137	regulation of response to DNA damage stimulus
LBM341_RS01905	COG0045	succinate-CoA ligase (ADP-forming) activity
LBM341_RS01915	COG0861	Integral membrane protein TerC family
LBM341_RS01920	COG4969	Belongs to the N-Me-Phe pilin family
LBM341_RS01925	COG4969	Belongs to the N-Me-Phe pilin family
LBM341_RS01935	COG0315	cyclic pyranopterin monophosphate synthase activity
LBM341_RS01940	COG4783	chaperone-mediated protein folding
LBM341_RS01950	COG0429	hydrolase of the alpha beta-hydrolase fold
LBM341_RS01960	COG0859	PFAM glycosyl transferase family 9
LBM341_RS01990	COG0126	phosphoglycerate kinase activity
LBM341_RS01995	COG0469	pyruvate kinase activity
LBM341_RS02005	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LBM341_RS02010	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LBM341_RS02015	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LBM341_RS02020	COG0009	L-threonylcarbamoyladenylate synthase
LBM341_RS02030	COG0546	phosphoglycolate phosphatase activity
LBM341_RS02045	COG1763	Mo-molybdopterin cofactor biosynthetic process
LBM341_RS02050	COG2027	D-alanyl-D-alanine carboxypeptidase
LBM341_RS02055	COG0738	Major facilitator superfamily
LBM341_RS02120	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LBM341_RS02130	COG3008	intermembrane lipid transfer
LBM341_RS02130	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LBM341_RS02135	COG2995	paraquat-inducible protein a
LBM341_RS02155	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
LBM341_RS02160	COG0840	transmembrane signaling receptor activity
LBM341_RS02200	COG0697	spore germination
LBM341_RS02220	COG2974	May be involved in recombination
LBM341_RS02225	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
LBM341_RS02230	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LBM341_RS02240	COG3039	Transposase
LBM341_RS02255	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LBM341_RS02260	COG0459	protein refolding
LBM341_RS02265	COG4269	membrane
LBM341_RS02325	COG4964	Belongs to the GSP D family
LBM341_RS02370	COG1704	LemA family
LBM341_RS02375	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LBM341_RS02380	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LBM341_RS02385	COG1773	rubredoxin
LBM341_RS02405	COG0840	transmembrane signaling receptor activity
LBM341_RS02410	COG0643	Histidine kinase
LBM341_RS02410	COG2198	Histidine kinase
LBM341_RS02410	COG0784	Response regulator, receiver
LBM341_RS02420	COG1187	pseudouridine synthase activity
LBM341_RS02425	COG1678	Uncharacterized ACR, COG1678
LBM341_RS02430	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LBM341_RS02435	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LBM341_RS02440	COG0540	Belongs to the ATCase OTCase family
LBM341_RS02455	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LBM341_RS02460	COG1088	dTDP-glucose 4,6-dehydratase activity
LBM341_RS02495	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LBM341_RS02510	COG0859	PFAM glycosyl transferase family 9
LBM341_RS02530	COG0425	Belongs to the sulfur carrier protein TusA family
LBM341_RS02530	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LBM341_RS02535	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LBM341_RS02555	COG1968	undecaprenyl-diphosphatase activity
LBM341_RS02560	COG1902	pentaerythritol trinitrate reductase activity
LBM341_RS02565	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LBM341_RS02595	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
LBM341_RS02610	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LBM341_RS02615	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LBM341_RS02630	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LBM341_RS02630	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LBM341_RS02695	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LBM341_RS02700	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LBM341_RS02705	COG4221	oxidoreductase activity
LBM341_RS02710	COG0824	Thioesterase
LBM341_RS02730	COG0823	Involved in the tonB-independent uptake of proteins
LBM341_RS02745	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LBM341_RS02750	COG2391	methyltransferase activity
LBM341_RS02760	COG3385	transposase activity
LBM341_RS02770	COG0745	RESPONSE REGULATOR receiver
LBM341_RS02775	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LBM341_RS02780	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LBM341_RS02805	COG0390	transport system, permease component
LBM341_RS02810	COG1136	(ABC) transporter
LBM341_RS02830	COG4575	ribosome binding
LBM341_RS02835	COG0450	alkyl hydroperoxide reductase
LBM341_RS02840	COG2252	PERMEase
LBM341_RS02845	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS02855	COG3483	tryptophan 2,3-dioxygenase activity
LBM341_RS02865	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
LBM341_RS02870	COG1522	sequence-specific DNA binding
LBM341_RS02880	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LBM341_RS02885	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LBM341_RS02895	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LBM341_RS02900	COG0259	pyridoxamine-phosphate oxidase activity
LBM341_RS02925	COG2982	Protein involved in outer membrane biogenesis
LBM341_RS02930	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LBM341_RS02935	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
LBM341_RS02940	COG2703	oxygen carrier activity
LBM341_RS02950	COG3118	belongs to the thioredoxin family
LBM341_RS02955	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS02965	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
LBM341_RS02980	COG4681	YaeQ
LBM341_RS03010	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LBM341_RS03035	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LBM341_RS03040	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LBM341_RS03065	COG0330	HflC and HflK could
LBM341_RS03080	COG0477	Major facilitator Superfamily
LBM341_RS03085	COG0235	Class ii aldolase
LBM341_RS03090	COG1942	4-Oxalocrotonate Tautomerase
LBM341_RS03105	COG0425	Belongs to the sulfur carrier protein TusA family
LBM341_RS03120	COG1280	lysine exporter protein (LysE YggA)
LBM341_RS03135	COG4305	rare lipoprotein A
LBM341_RS03150	COG0778	Nitroreductase
LBM341_RS03155	COG3039	Transposase
LBM341_RS03225	COG2085	NADP oxidoreductase coenzyme F420-dependent
LBM341_RS03235	COG4221	oxidoreductase activity
LBM341_RS03345	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LBM341_RS03370	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LBM341_RS03375	COG1605	Chorismate mutase
LBM341_RS03375	COG0077	Prephenate dehydratase
LBM341_RS03380	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LBM341_RS03385	COG0287	Prephenate dehydrogenase
LBM341_RS03390	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LBM341_RS03395	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LBM341_RS03405	COG0776	regulation of translation
LBM341_RS03415	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LBM341_RS03425	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LBM341_RS03430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LBM341_RS03445	COG2951	lytic endotransglycosylase activity
LBM341_RS03450	COG0123	including yeast histone deacetylase and acetoin utilization protein
LBM341_RS03455	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LBM341_RS03460	COG2011	ABC-type metal ion transport system permease component
LBM341_RS03480	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS03485	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS03520	COG0228	four-way junction DNA binding
LBM341_RS03525	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LBM341_RS03530	COG0336	Belongs to the RNA methyltransferase TrmD family
LBM341_RS03535	COG0335	large ribosomal subunit rRNA binding
LBM341_RS03540	COG0494	nUDIX hydrolase
LBM341_RS03545	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
LBM341_RS03555	COG1162	GTPase activity
LBM341_RS03560	COG0501	Belongs to the peptidase M48B family
LBM341_RS03565	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
LBM341_RS03570	COG0521	Mo-molybdopterin cofactor biosynthetic process
LBM341_RS03575	COG3028	Belongs to the UPF0307 family
LBM341_RS03580	COG0312	modulator of DNA gyrase
LBM341_RS03590	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LBM341_RS03600	COG0861	Integral membrane protein TerC family
LBM341_RS03610	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LBM341_RS03615	COG0513	Belongs to the DEAD box helicase family
LBM341_RS03665	COG0741	lytic transglycosylase activity
LBM341_RS03685	COG1620	l-lactate permease
LBM341_RS03700	COG0625	glutathione transferase activity
LBM341_RS03705	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LBM341_RS03715	COG0697	spore germination
LBM341_RS03720	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LBM341_RS03725	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LBM341_RS03730	COG0326	Molecular chaperone. Has ATPase activity
LBM341_RS03770	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LBM341_RS03805	COG0778	Nitroreductase
LBM341_RS03810	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LBM341_RS03815	COG2878	Part of a membrane complex involved in electron transport
LBM341_RS03820	COG1309	transcriptional regulator
LBM341_RS03835	COG0556	nucleotide-excision repair
LBM341_RS03845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LBM341_RS03850	COG1609	Transcriptional regulator
LBM341_RS03855	COG1172	Belongs to the binding-protein-dependent transport system permease family
LBM341_RS03865	COG1879	ABC-type sugar transport system periplasmic component
LBM341_RS03875	COG1104	cysteine desulfurase activity
LBM341_RS03880	COG0822	iron-sulfur transferase activity
LBM341_RS03885	COG0316	Belongs to the HesB IscA family
LBM341_RS03895	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
LBM341_RS03900	COG0443	Heat shock 70 kDa protein
LBM341_RS03915	COG3385	transposase activity
LBM341_RS03925	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LBM341_RS03930	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS03945	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LBM341_RS03960	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LBM341_RS03965	COG1322	Protein conserved in bacteria
LBM341_RS03980	COG0746	molybdenum cofactor guanylyltransferase activity
LBM341_RS03985	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LBM341_RS03990	COG1530	ribonuclease E activity
LBM341_RS04000	COG0546	phosphoglycolate phosphatase activity
LBM341_RS04010	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LBM341_RS04010	COG0616	signal peptide processing
LBM341_RS04020	COG0424	maF-like protein
LBM341_RS04025	COG1399	metal-binding, possibly nucleic acid-binding protein
LBM341_RS04030	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LBM341_RS04035	COG0416	fatty acid biosynthetic process
LBM341_RS04040	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LBM341_RS04050	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS04055	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LBM341_RS04060	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LBM341_RS04080	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LBM341_RS04090	COG0481	GTPase activity
LBM341_RS04095	COG0681	Belongs to the peptidase S26 family
LBM341_RS04105	COG0571	ribonuclease III activity
LBM341_RS04110	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LBM341_RS04115	COG1381	Involved in DNA repair and RecF pathway recombination
LBM341_RS04120	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
LBM341_RS04125	COG0736	holo-[acyl-carrier-protein] synthase activity
LBM341_RS04135	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LBM341_RS04145	COG0322	excinuclease ABC activity
LBM341_RS04170	COG0745	RESPONSE REGULATOR receiver
LBM341_RS04180	COG5002	protein histidine kinase activity
LBM341_RS04185	COG0745	RESPONSE REGULATOR receiver
LBM341_RS04195	COG3039	Transposase
LBM341_RS04205	COG2186	Transcriptional regulator
LBM341_RS04215	COG2271	Major facilitator Superfamily
LBM341_RS04225	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS04235	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS04240	COG0625	glutathione transferase activity
LBM341_RS04280	COG2271	Major facilitator Superfamily
LBM341_RS04285	COG0583	DNA-binding transcription factor activity
LBM341_RS04295	COG0436	Aminotransferase
LBM341_RS04380	COG0583	DNA-binding transcription factor activity
LBM341_RS04385	COG2855	membrane
LBM341_RS04410	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LBM341_RS04415	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LBM341_RS04430	COG1136	(ABC) transporter
LBM341_RS04435	COG0084	hydrolase, TatD family'
LBM341_RS04445	COG2308	Evidence 4 Homologs of previously reported genes of
LBM341_RS04465	COG2267	carboxylic ester hydrolase activity
LBM341_RS04470	COG0504	CTP synthase activity
LBM341_RS04475	COG2877	3-deoxy-8-phosphooctulonate synthase activity
LBM341_RS04485	COG0148	phosphopyruvate hydratase activity
LBM341_RS04490	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LBM341_RS04500	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LBM341_RS04510	COG2833	Protein of unknown function (DUF455)
LBM341_RS04515	COG2267	carboxylic ester hydrolase activity
LBM341_RS04520	COG3011	Protein conserved in bacteria
LBM341_RS04535	COG0492	ferredoxin-NADP+ reductase activity
LBM341_RS04540	COG0613	PHP domain protein
LBM341_RS04545	COG0009	L-threonylcarbamoyladenylate synthase
LBM341_RS04550	COG1994	Peptidase M50
LBM341_RS04555	COG0180	Tryptophanyl-tRNA synthetase
LBM341_RS04565	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LBM341_RS04570	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
LBM341_RS04575	COG1234	tRNA 3'-trailer cleavage
LBM341_RS04580	COG2850	peptidyl-arginine hydroxylation
LBM341_RS04595	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LBM341_RS04600	COG0583	DNA-binding transcription factor activity
LBM341_RS04605	COG2814	Major facilitator Superfamily
LBM341_RS04615	COG0840	transmembrane signaling receptor activity
LBM341_RS04620	COG0840	transmembrane signaling receptor activity
LBM341_RS04625	COG2258	MOSC domain
LBM341_RS04635	COG1396	sequence-specific DNA binding
LBM341_RS04650	COG1045	serine acetyltransferase
LBM341_RS04655	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LBM341_RS04660	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LBM341_RS04675	COG0215	cysteine-tRNA ligase activity
LBM341_RS04680	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LBM341_RS04685	COG0825	malonyl-CoA metabolic process
LBM341_RS04690	COG0037	tRNA processing
LBM341_RS04695	COG0527	aspartate kinase activity
LBM341_RS04710	COG4166	transmembrane transport
LBM341_RS04715	COG4174	ABC transporter (Permease)
LBM341_RS04720	COG4239	(ABC) transporter, permease
LBM341_RS04725	COG4172	Belongs to the ABC transporter superfamily
LBM341_RS04730	COG0791	NLP P60 protein
LBM341_RS04735	COG1752	Esterase of the alpha-beta hydrolase superfamily
LBM341_RS04740	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LBM341_RS04775	COG0534	Mate efflux family protein
LBM341_RS04785	COG0254	rRNA binding
LBM341_RS04795	COG3228	Belongs to the MtfA family
LBM341_RS04800	COG2197	response regulator
LBM341_RS04805	COG2204	response regulator
LBM341_RS04810	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LBM341_RS04825	COG1074	ATP-dependent DNA helicase activity
LBM341_RS04835	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LBM341_RS04840	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LBM341_RS04845	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LBM341_RS04860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LBM341_RS04865	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LBM341_RS04875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LBM341_RS04880	COG1309	transcriptional regulator
LBM341_RS04885	COG1902	pentaerythritol trinitrate reductase activity
LBM341_RS04890	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS04890	COG3321	synthase
LBM341_RS04890	COG0604	alcohol dehydrogenase
LBM341_RS04895	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
LBM341_RS04900	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LBM341_RS04920	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LBM341_RS04930	COG0105	UTP biosynthetic process
LBM341_RS04935	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LBM341_RS04950	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LBM341_RS04955	COG0124	histidyl-tRNA synthetase
LBM341_RS04960	COG2976	Protein conserved in bacteria
LBM341_RS04970	COG1160	GTP binding
LBM341_RS04975	COG1923	regulation of RNA biosynthetic process
LBM341_RS04980	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LBM341_RS04985	COG0330	HflC and HflK could
LBM341_RS04990	COG0330	HflC and HflK could
LBM341_RS05000	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LBM341_RS05005	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LBM341_RS05010	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
LBM341_RS05020	COG0557	exoribonuclease II activity
LBM341_RS05025	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LBM341_RS05030	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LBM341_RS05035	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LBM341_RS05040	COG1953	Uracil, thiamine, allantoin
LBM341_RS05050	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
LBM341_RS05060	COG3718	enzyme involved in inositol metabolism
LBM341_RS05070	COG3962	Belongs to the TPP enzyme family
LBM341_RS05075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LBM341_RS05085	COG1129	ABC transporter
LBM341_RS05090	COG1172	Belongs to the binding-protein-dependent transport system permease family
LBM341_RS05095	COG1082	Xylose isomerase domain protein TIM barrel
LBM341_RS05105	COG0673	inositol 2-dehydrogenase activity
LBM341_RS05115	COG0673	inositol 2-dehydrogenase activity
LBM341_RS05120	COG1737	Transcriptional regulator
LBM341_RS05125	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
LBM341_RS05125	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LBM341_RS05130	COG1643	Atp-dependent helicase
LBM341_RS05155	COG1546	Belongs to the CinA family
LBM341_RS05155	COG1058	Belongs to the CinA family
LBM341_RS05165	COG0174	glutamine synthetase
LBM341_RS05180	COG2204	response regulator
LBM341_RS05195	COG1653	transport
LBM341_RS05200	COG1175	transmembrane transport
LBM341_RS05210	COG3842	ATPase activity
LBM341_RS05215	COG0584	glycerophosphoryl diester phosphodiesterase
LBM341_RS05220	COG0567	Dehydrogenase, E1 component
LBM341_RS05225	COG0508	dehydrogenase complex catalyzes the overall conversion of
LBM341_RS05230	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LBM341_RS05235	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LBM341_RS05245	COG2217	Heavy metal translocating P-type atpase
LBM341_RS05255	COG3278	Belongs to the heme-copper respiratory oxidase family
LBM341_RS05290	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LBM341_RS05300	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LBM341_RS05305	COG1187	pseudouridine synthase activity
LBM341_RS05310	COG0779	Required for maturation of 30S ribosomal subunits
LBM341_RS05315	COG0195	Participates in both transcription termination and antitermination
LBM341_RS05315	COG2251	uridine kinase activity
LBM341_RS05320	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LBM341_RS05325	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LBM341_RS05330	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LBM341_RS05335	COG2814	Major facilitator Superfamily
LBM341_RS05340	COG1566	PFAM secretion protein HlyD family protein
LBM341_RS05370	COG1024	Enoyl-CoA hydratase
LBM341_RS05395	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LBM341_RS05405	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LBM341_RS05420	COG0360	Binds together with S18 to 16S ribosomal RNA
LBM341_RS05430	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LBM341_RS05435	COG0359	binds to the 23S rRNA
LBM341_RS05440	COG0305	Participates in initiation and elongation during chromosome replication
LBM341_RS05450	COG0306	phosphate transporter
LBM341_RS05455	COG0791	NLP P60 protein
LBM341_RS05465	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LBM341_RS05470	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LBM341_RS05480	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LBM341_RS05480	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LBM341_RS05495	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LBM341_RS05500	COG2076	Multidrug Resistance protein
LBM341_RS05505	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LBM341_RS05515	COG0436	Aminotransferase
LBM341_RS05530	COG1573	uracil-dna glycosylase
LBM341_RS05535	COG0303	'Molybdopterin
LBM341_RS05540	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LBM341_RS05545	COG0314	molybdopterin synthase activity
LBM341_RS05550	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LBM341_RS05560	COG0542	response to heat
LBM341_RS05570	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LBM341_RS05580	COG4191	Histidine kinase
LBM341_RS05595	COG0281	malic enzyme
LBM341_RS05600	COG2985	domain, Protein
LBM341_RS05605	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LBM341_RS05610	COG0431	NADPH-dependent FMN reductase
LBM341_RS05615	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LBM341_RS05620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LBM341_RS05625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LBM341_RS05630	COG1116	anion transmembrane transporter activity
LBM341_RS05655	COG4208	sulfate ABC transporter
LBM341_RS05660	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LBM341_RS05665	COG0583	DNA-binding transcription factor activity
LBM341_RS05680	COG3275	phosphorelay sensor kinase activity
LBM341_RS05695	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LBM341_RS05715	COG2224	Isocitrate lyase
LBM341_RS05725	COG0583	DNA-binding transcription factor activity
LBM341_RS05735	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LBM341_RS05745	COG2814	Major facilitator Superfamily
LBM341_RS05755	COG1214	PFAM Peptidase M22, glycoprotease
LBM341_RS05760	COG0456	acetyltransferase
LBM341_RS05765	COG1573	uracil-dna glycosylase
LBM341_RS05770	COG0477	Major facilitator Superfamily
LBM341_RS05775	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LBM341_RS05785	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LBM341_RS05790	COG1683	Conserved Protein
LBM341_RS05800	COG0488	(ABC) transporter
LBM341_RS05815	COG4172	Belongs to the ABC transporter superfamily
LBM341_RS05820	COG0747	negative chemotaxis
LBM341_RS05825	COG0601	transmembrane transport
LBM341_RS05830	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBM341_RS05855	COG0302	gtp cyclohydrolase
LBM341_RS05860	COG2890	protein-(glutamine-N5) methyltransferase activity
LBM341_RS05870	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LBM341_RS05875	COG1393	Belongs to the ArsC family
LBM341_RS05885	COG2171	N-acyltransferase activity
LBM341_RS05900	COG0596	Alpha beta hydrolase
LBM341_RS05915	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LBM341_RS05920	COG0242	peptide deformylase activity
LBM341_RS05930	COG1187	pseudouridine synthase activity
LBM341_RS05935	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
LBM341_RS05940	COG0024	Methionine aminopeptidase
LBM341_RS05945	COG0052	Belongs to the universal ribosomal protein uS2 family
LBM341_RS05950	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LBM341_RS05955	COG0528	UMP kinase activity
LBM341_RS05960	COG0233	cytoplasmic translational termination
LBM341_RS05965	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LBM341_RS05970	COG0575	Belongs to the CDS family
LBM341_RS05975	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
LBM341_RS05980	COG0750	zinc metalloprotease
LBM341_RS05995	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LBM341_RS06000	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LBM341_RS06005	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LBM341_RS06010	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LBM341_RS06015	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LBM341_RS06020	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LBM341_RS06025	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LBM341_RS06040	COG0330	HflC and HflK could
LBM341_RS06045	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LBM341_RS06050	COG2867	negative regulation of translational initiation
LBM341_RS06055	COG2914	Belongs to the UPF0125 (RnfH) family
LBM341_RS06065	COG0697	spore germination
LBM341_RS06080	COG0519	Catalyzes the synthesis of GMP from XMP
LBM341_RS06080	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LBM341_RS06110	COG1002	Type II restriction enzyme, methylase subunits
LBM341_RS06120	COG1061	Type III restriction enzyme res subunit
LBM341_RS06125	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LBM341_RS06170	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS06190	COG1063	alcohol dehydrogenase
LBM341_RS06195	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS06200	COG3265	gluconokinase activity
LBM341_RS06210	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LBM341_RS06215	COG0436	Aminotransferase
LBM341_RS06225	COG0511	ligase activity, forming carbon-carbon bonds
LBM341_RS06235	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LBM341_RS06240	COG1984	allophanate hydrolase subunit 2
LBM341_RS06250	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LBM341_RS06255	COG4221	oxidoreductase activity
LBM341_RS06260	COG0765	amino acid transport
LBM341_RS06265	COG0765	amino acid transport
LBM341_RS06270	COG1126	abc transporter atp-binding protein
LBM341_RS06275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LBM341_RS06295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS06315	COG4974	Belongs to the 'phage' integrase family
LBM341_RS06360	COG0596	Alpha beta hydrolase
LBM341_RS06380	COG2130	NADP-dependent
LBM341_RS06395	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS06400	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS06405	COG0183	Belongs to the thiolase family
LBM341_RS06410	COG1335	isochorismatase
LBM341_RS06420	COG0833	amino acid
LBM341_RS06425	COG0833	amino acid
LBM341_RS06455	COG0559	Belongs to the binding-protein-dependent transport system permease family
LBM341_RS06465	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS06470	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
LBM341_RS06475	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LBM341_RS06480	COG2917	probably involved in intracellular septation
LBM341_RS06490	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LBM341_RS06495	COG1126	abc transporter atp-binding protein
LBM341_RS06520	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LBM341_RS06525	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS06535	COG0642	Histidine kinase
LBM341_RS06540	COG3842	ATPase activity
LBM341_RS06550	COG1176	ABC-type spermidine putrescine transport system, permease component I
LBM341_RS06560	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS06565	COG0583	DNA-binding transcription factor activity
LBM341_RS06585	COG0535	radical SAM domain protein
LBM341_RS06605	COG0047	phosphoribosylformylglycinamidine synthase activity
LBM341_RS06605	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LBM341_RS06615	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LBM341_RS06620	COG0166	Belongs to the GPI family
LBM341_RS06625	COG4181	ATPase activity
LBM341_RS06640	COG3385	transposase activity
LBM341_RS06645	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LBM341_RS06660	COG0776	regulation of translation
LBM341_RS06665	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LBM341_RS06670	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LBM341_RS06675	COG0740	serine-type endopeptidase activity
LBM341_RS06680	COG0544	peptidyl-prolyl cis-trans isomerase activity
LBM341_RS06685	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LBM341_RS06685	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS06695	COG1652	LysM domain
LBM341_RS06750	COG4381	Mu-like prophage protein gp46
LBM341_RS06765	COG4228	DNA circulation
LBM341_RS06785	COG4386	tail sheath protein
LBM341_RS06920	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
LBM341_RS06945	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS06950	COG1562	ergosterol biosynthetic process
LBM341_RS06970	COG0745	RESPONSE REGULATOR receiver
LBM341_RS06980	COG0450	alkyl hydroperoxide reductase
LBM341_RS06985	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LBM341_RS06990	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
LBM341_RS06995	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LBM341_RS07000	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LBM341_RS07010	COG0560	Phosphoserine phosphatase
LBM341_RS07025	COG0183	Belongs to the thiolase family
LBM341_RS07030	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LBM341_RS07035	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LBM341_RS07045	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS07050	COG0183	Belongs to the thiolase family
LBM341_RS07055	COG3243	poly(R)-hydroxyalkanoic acid synthase
LBM341_RS07070	COG0564	pseudouridine synthase activity
LBM341_RS07080	COG1199	ATP-dependent helicase activity
LBM341_RS07095	COG2183	response to ionizing radiation
LBM341_RS07105	COG3158	transport of potassium into the cell
LBM341_RS07115	COG0167	dihydroorotate dehydrogenase activity
LBM341_RS07135	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
LBM341_RS07140	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
LBM341_RS07165	COG1414	Transcriptional regulator
LBM341_RS07185	COG0123	including yeast histone deacetylase and acetoin utilization protein
LBM341_RS07200	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LBM341_RS07210	COG0508	dehydrogenase complex catalyzes the overall conversion of
LBM341_RS07215	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
LBM341_RS07225	COG4566	intracellular signal transduction
LBM341_RS07230	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LBM341_RS07235	COG0339	signal peptide processing
LBM341_RS07240	COG0402	S-adenosylhomocysteine deaminase activity
LBM341_RS07250	COG1846	Transcriptional regulator
LBM341_RS07270	COG0531	amino acid
LBM341_RS07275	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LBM341_RS07300	COG0776	regulation of translation
LBM341_RS07305	COG0072	phenylalanine-tRNA ligase activity
LBM341_RS07305	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LBM341_RS07310	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LBM341_RS07315	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LBM341_RS07320	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LBM341_RS07325	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LBM341_RS07330	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LBM341_RS07340	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LBM341_RS07345	COG0251	oxidation-reduction process
LBM341_RS07355	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS07370	COG4566	intracellular signal transduction
LBM341_RS07375	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS07385	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LBM341_RS07390	COG0545	Peptidyl-prolyl cis-trans isomerase
LBM341_RS07395	COG0477	Major facilitator Superfamily
LBM341_RS07420	COG1295	ribonuclease BN
LBM341_RS07435	COG0277	FAD linked oxidase domain protein
LBM341_RS07505	COG0640	Transcriptional regulator
LBM341_RS07515	COG0730	response to heat
LBM341_RS07540	COG0248	Ppx GppA phosphatase
LBM341_RS07545	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LBM341_RS07555	COG0745	RESPONSE REGULATOR receiver
LBM341_RS07565	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LBM341_RS07570	COG0581	inorganic phosphate transmembrane transporter activity
LBM341_RS07575	COG0573	inorganic phosphate transmembrane transporter activity
LBM341_RS07580	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LBM341_RS07585	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LBM341_RS07590	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LBM341_RS07595	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LBM341_RS07600	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
LBM341_RS07605	COG1534	Rna-binding protein
LBM341_RS07615	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LBM341_RS07620	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LBM341_RS07630	COG0505	Belongs to the CarA family
LBM341_RS07635	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LBM341_RS07640	COG1388	LysM domain
LBM341_RS07640	COG0741	lytic transglycosylase activity
LBM341_RS07645	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LBM341_RS07650	COG2226	methyltransferase
LBM341_RS07655	COG0328	RNA-DNA hybrid ribonuclease activity
LBM341_RS07690	COG0589	response to stress
LBM341_RS07705	COG2304	oxidoreductase activity
LBM341_RS07710	COG0656	L-ascorbic acid biosynthetic process
LBM341_RS07740	COG0582	viral genome integration into host DNA
LBM341_RS07750	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LBM341_RS07795	COG2072	flavoprotein involved in K transport
LBM341_RS07800	COG0601	transmembrane transport
LBM341_RS07820	COG0747	negative chemotaxis
LBM341_RS07860	COG0840	transmembrane signaling receptor activity
LBM341_RS07865	COG2197	response regulator
LBM341_RS07890	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LBM341_RS07895	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LBM341_RS07900	COG0697	spore germination
LBM341_RS07915	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LBM341_RS07920	COG1301	dicarboxylic acid transport
LBM341_RS07965	COG3193	protein, possibly involved in utilization of glycolate and propanediol
LBM341_RS07995	COG1131	(ABC) transporter
LBM341_RS08000	COG0842	Transport permease protein
LBM341_RS08020	COG0285	dihydrofolate synthase activity
LBM341_RS08025	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LBM341_RS08030	COG0159	tryptophan synthase activity
LBM341_RS08040	COG0133	tryptophan synthase activity
LBM341_RS08045	COG0135	phosphoribosylanthranilate isomerase activity
LBM341_RS08050	COG0101	tRNA pseudouridine synthase activity
LBM341_RS08065	COG0473	3-isopropylmalate dehydrogenase activity
LBM341_RS08070	COG0066	3-isopropylmalate dehydratase activity
LBM341_RS08075	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LBM341_RS08080	COG0372	Belongs to the citrate synthase family
LBM341_RS08085	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LBM341_RS08090	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LBM341_RS08095	COG1053	succinate dehydrogenase
LBM341_RS08100	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
LBM341_RS08110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LBM341_RS08115	COG0039	L-malate dehydrogenase activity
LBM341_RS08140	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LBM341_RS08155	COG0747	negative chemotaxis
LBM341_RS08165	COG2866	Carboxypeptidase
LBM341_RS08170	COG3022	response to hydroperoxide
LBM341_RS08180	COG0436	Aminotransferase
LBM341_RS08185	COG0625	glutathione transferase activity
LBM341_RS08190	COG1250	3-hydroxyacyl-CoA dehydrogenase
LBM341_RS08195	COG1024	Enoyl-CoA hydratase
LBM341_RS08225	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS08230	COG0625	glutathione transferase activity
LBM341_RS08260	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LBM341_RS08265	COG0830	nickel cation binding
LBM341_RS08270	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
LBM341_RS08275	COG0804	urea catabolic process
LBM341_RS08280	COG0832	Belongs to the urease beta subunit family
LBM341_RS08290	COG0831	urea catabolic process
LBM341_RS08295	COG0829	nickel cation binding
LBM341_RS08330	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS08330	COG2030	dehydratase
LBM341_RS08335	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS08370	COG1007	ATP synthesis coupled electron transport
LBM341_RS08385	COG0713	ATP synthesis coupled electron transport
LBM341_RS08395	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LBM341_RS08400	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
LBM341_RS08405	COG1034	ATP synthesis coupled electron transport
LBM341_RS08420	COG0649	NAD binding
LBM341_RS08425	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LBM341_RS08430	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LBM341_RS08435	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LBM341_RS08445	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LBM341_RS08450	COG0149	triose-phosphate isomerase activity
LBM341_RS08465	COG1185	polyribonucleotide nucleotidyltransferase activity
LBM341_RS08470	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LBM341_RS08475	COG0683	leucine binding
LBM341_RS08485	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LBM341_RS08490	COG1183	phosphatidylcholine synthase activity
LBM341_RS08495	COG0688	phosphatidylethanolamine metabolic process
LBM341_RS08500	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LBM341_RS08510	COG0028	Belongs to the TPP enzyme family
LBM341_RS08545	COG0438	transferase activity, transferring glycosyl groups
LBM341_RS08555	COG1309	transcriptional regulator
LBM341_RS08580	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
LBM341_RS08605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
LBM341_RS08615	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LBM341_RS08620	COG0402	S-adenosylhomocysteine deaminase activity
LBM341_RS08625	COG2119	membrane
LBM341_RS08635	COG2186	Transcriptional regulator
LBM341_RS08645	COG0765	amino acid transport
LBM341_RS08650	COG0765	amino acid transport
LBM341_RS08655	COG1126	abc transporter atp-binding protein
LBM341_RS08665	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS08675	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS08680	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LBM341_RS08685	COG2271	Major facilitator Superfamily
LBM341_RS08690	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS08695	COG3039	Transposase
LBM341_RS08710	COG2351	hydroxyisourate hydrolase activity
LBM341_RS08720	COG2233	PERMEase
LBM341_RS08735	COG3648	Uricase
LBM341_RS08735	COG3195	allantoin biosynthetic process
LBM341_RS08745	COG0281	malic enzyme
LBM341_RS08745	COG0280	phosphate acetyltransferase
LBM341_RS08755	COG0308	aminopeptidase N
LBM341_RS08760	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
LBM341_RS08770	COG2390	Transcriptional regulator
LBM341_RS08775	COG1070	Carbohydrate kinase
LBM341_RS08780	COG0246	Mannitol dehydrogenase
LBM341_RS08805	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS08810	COG0166	Belongs to the GPI family
LBM341_RS08810	COG0166	Belongs to the GPI family
LBM341_RS08815	COG1733	regulation of RNA biosynthetic process
LBM341_RS08825	COG3842	ATPase activity
LBM341_RS08830	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LBM341_RS08855	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LBM341_RS08865	COG1652	LysM domain
LBM341_RS08895	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LBM341_RS08900	COG1758	RNA polymerase activity
LBM341_RS08905	COG0194	GDP metabolic process
LBM341_RS08910	COG1561	YicC-like family, N-terminal region
LBM341_RS08915	COG4991	sh3 domain protein
LBM341_RS08915	COG0515	serine threonine protein kinase
LBM341_RS08915	COG3064	Membrane
LBM341_RS08925	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LBM341_RS08930	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LBM341_RS08935	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LBM341_RS08945	COG1234	tRNA 3'-trailer cleavage
LBM341_RS08960	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LBM341_RS08965	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
LBM341_RS08980	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LBM341_RS08985	COG1984	allophanate hydrolase subunit 2
LBM341_RS08990	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LBM341_RS08995	COG2814	Major facilitator Superfamily
LBM341_RS09000	COG1129	ABC transporter
LBM341_RS09055	COG1803	Methylglyoxal synthase
LBM341_RS09060	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS09065	COG0697	spore germination
LBM341_RS09070	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LBM341_RS09075	COG0433	COG0433 Predicted ATPase
LBM341_RS09080	COG0217	transcriptional regulatory protein
LBM341_RS09085	COG0151	Belongs to the GarS family
LBM341_RS09090	COG0408	coproporphyrinogen oxidase activity
LBM341_RS09100	COG0799	negative regulation of ribosome biogenesis
LBM341_RS09105	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LBM341_RS09110	COG0424	maF-like protein
LBM341_RS09115	COG1530	ribonuclease E activity
LBM341_RS09135	COG1132	(ABC) transporter
LBM341_RS09145	COG0463	Glycosyl transferase, family 2
LBM341_RS09175	COG1741	Belongs to the pirin family
LBM341_RS09180	COG0583	DNA-binding transcription factor activity
LBM341_RS09185	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LBM341_RS09190	COG0513	Belongs to the DEAD box helicase family
LBM341_RS09195	COG0426	domain, Protein
LBM341_RS09195	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LBM341_RS09205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LBM341_RS09225	COG1610	YqeY-like protein
LBM341_RS09230	COG2081	HI0933 family
LBM341_RS09235	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LBM341_RS09240	COG1469	GTP cyclohydrolase I activity
LBM341_RS09245	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LBM341_RS09250	COG0142	geranyltranstransferase activity
LBM341_RS09255	COG1722	exodeoxyribonuclease VII activity
LBM341_RS09275	COG3385	transposase activity
LBM341_RS09285	COG0412	Dienelactone hydrolase
LBM341_RS09290	COG1252	NADH dehydrogenase
LBM341_RS09295	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LBM341_RS09295	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LBM341_RS09300	COG1611	Belongs to the LOG family
LBM341_RS09310	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LBM341_RS09320	COG0210	DNA helicase
LBM341_RS09325	COG0525	valine-tRNA ligase activity
LBM341_RS09340	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LBM341_RS09350	COG2342	PFAM TM1410 hypothetical-related protein
LBM341_RS09365	COG0683	leucine binding
LBM341_RS09375	COG0411	ABC transporter
LBM341_RS09390	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LBM341_RS09395	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LBM341_RS09410	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LBM341_RS09420	COG1414	Transcriptional regulator
LBM341_RS09430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LBM341_RS09435	COG0765	amino acid transport
LBM341_RS09440	COG0765	amino acid transport
LBM341_RS09455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS09495	COG1253	flavin adenine dinucleotide binding
LBM341_RS09545	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LBM341_RS09615	COG2165	general secretion pathway protein
LBM341_RS09670	COG2197	response regulator
LBM341_RS09685	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS09705	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LBM341_RS09710	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LBM341_RS09720	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LBM341_RS09725	COG1674	ftsk spoiiie
LBM341_RS09730	COG0492	ferredoxin-NADP+ reductase activity
LBM341_RS09765	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LBM341_RS09780	COG2271	Major facilitator Superfamily
LBM341_RS09805	COG0181	hydroxymethylbilane synthase activity
LBM341_RS09810	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LBM341_RS09835	COG0165	Argininosuccinate lyase
LBM341_RS09880	COG1982	Orn Lys Arg decarboxylase major
LBM341_RS09885	COG0717	Belongs to the dCTP deaminase family
LBM341_RS09890	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LBM341_RS09895	COG2032	superoxide dismutase activity
LBM341_RS09915	COG0437	4 iron, 4 sulfur cluster binding
LBM341_RS09920	COG3383	formate dehydrogenase (NAD+) activity
LBM341_RS09920	COG0243	molybdopterin cofactor binding
LBM341_RS09950	COG0489	protein tyrosine kinase activity
LBM341_RS09955	COG3047	cAMP biosynthetic process
LBM341_RS09955	COG2885	chlorophyll binding
LBM341_RS09960	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LBM341_RS09960	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LBM341_RS09970	COG2911	Protein conserved in bacteria
LBM341_RS09985	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LBM341_RS09990	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LBM341_RS10000	COG1492	cobalamin metabolic process
LBM341_RS10010	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
LBM341_RS10020	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LBM341_RS10030	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
LBM341_RS10035	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
LBM341_RS10040	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
LBM341_RS10050	COG4206	TonB-dependent receptor
LBM341_RS10080	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LBM341_RS10085	COG0583	DNA-binding transcription factor activity
LBM341_RS10090	COG0129	dihydroxy-acid dehydratase activity
LBM341_RS10095	COG3385	transposase activity
LBM341_RS10110	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LBM341_RS10140	COG2895	sulfate adenylyltransferase (ATP) activity
LBM341_RS10150	COG0175	sulfate reduction
LBM341_RS10160	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LBM341_RS10170	COG0583	DNA-binding transcription factor activity
LBM341_RS10180	COG2084	Dehydrogenase
LBM341_RS10215	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LBM341_RS10250	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LBM341_RS10255	COG1047	Peptidyl-prolyl cis-trans
LBM341_RS10260	COG2003	Belongs to the UPF0758 family
LBM341_RS10265	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LBM341_RS10270	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LBM341_RS10275	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LBM341_RS10285	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LBM341_RS10295	COG1511	domain protein
LBM341_RS10295	COG3264	Mechanosensitive ion channel
LBM341_RS10305	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LBM341_RS10305	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LBM341_RS10310	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LBM341_RS10320	COG5002	protein histidine kinase activity
LBM341_RS10320	COG0784	Response regulator, receiver
LBM341_RS10325	COG0196	riboflavin kinase activity
LBM341_RS10330	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LBM341_RS10335	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LBM341_RS10345	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LBM341_RS10350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LBM341_RS10355	COG0756	dUTP diphosphatase activity
LBM341_RS10360	COG0542	response to heat
LBM341_RS10365	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
LBM341_RS10370	COG1278	Cold shock
LBM341_RS10405	COG1858	cytochrome C peroxidase
LBM341_RS10425	COG0583	DNA-binding transcription factor activity
LBM341_RS10430	COG0583	DNA-binding transcription factor activity
LBM341_RS10440	COG2259	Doxx family
LBM341_RS10455	COG2321	neutral zinc metallopeptidase
LBM341_RS10460	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS10495	COG1473	amidohydrolase
LBM341_RS10530	COG2610	gluconate transmembrane transporter activity
LBM341_RS10570	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LBM341_RS10575	COG1570	exodeoxyribonuclease VII activity
LBM341_RS10580	COG0811	peptide transport
LBM341_RS10590	COG1663	tetraacyldisaccharide 4'-kinase activity
LBM341_RS10595	COG2835	tetraacyldisaccharide 4'-kinase activity
LBM341_RS10600	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
LBM341_RS10605	COG0563	adenylate kinase activity
LBM341_RS10625	COG0583	DNA-binding transcription factor activity
LBM341_RS10635	COG0860	N-Acetylmuramoyl-L-alanine amidase
LBM341_RS10640	COG0802	atpase or kinase
LBM341_RS10645	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LBM341_RS10660	COG4974	Belongs to the 'phage' integrase family
LBM341_RS10670	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LBM341_RS10675	COG2366	antibiotic biosynthetic process
LBM341_RS10685	COG1666	GTP binding
LBM341_RS10690	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LBM341_RS10700	COG3123	guanosine phosphorylase activity
LBM341_RS10705	COG0137	argininosuccinate synthase activity
LBM341_RS10720	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LBM341_RS10730	COG0268	Binds directly to 16S ribosomal RNA
LBM341_RS10735	COG0728	peptidoglycan biosynthetic process
LBM341_RS10745	COG0586	Pfam SNARE associated Golgi protein
LBM341_RS10760	COG3008	intermembrane lipid transfer
LBM341_RS10765	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LBM341_RS10770	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LBM341_RS10775	COG0456	acetyltransferase
LBM341_RS10780	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LBM341_RS10780	COG2169	Transcriptional regulator
LBM341_RS10800	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LBM341_RS10800	COG2169	Transcriptional regulator
LBM341_RS10815	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LBM341_RS10820	COG0628	permease
LBM341_RS10825	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LBM341_RS10840	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LBM341_RS10850	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LBM341_RS10855	COG4662	Binding-protein-dependent transport system inner membrane component
LBM341_RS10860	COG1122	ATPase activity
LBM341_RS10865	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LBM341_RS10865	COG0512	Glutamine amidotransferase of anthranilate synthase
LBM341_RS10870	COG0484	heat shock protein binding
LBM341_RS10875	COG0443	Heat shock 70 kDa protein
LBM341_RS10880	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LBM341_RS10890	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LBM341_RS10905	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LBM341_RS10910	COG1228	amidohydrolase
LBM341_RS10915	COG0010	Belongs to the arginase family
LBM341_RS10920	COG2986	histidine ammonia-lyase
LBM341_RS10925	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LBM341_RS10935	COG1420	regulation of RNA biosynthetic process
LBM341_RS10940	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LBM341_RS10945	COG0497	DNA recombination
LBM341_RS10955	COG1404	Belongs to the peptidase S8 family
LBM341_RS10970	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
LBM341_RS10980	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LBM341_RS10985	COG0312	modulator of DNA gyrase
LBM341_RS10990	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LBM341_RS11000	COG0668	transmembrane transport
LBM341_RS11005	COG2096	Adenosyltransferase
LBM341_RS11010	COG0277	FAD linked oxidase domain protein
LBM341_RS11015	COG0583	DNA-binding transcription factor activity
LBM341_RS11020	COG0277	FAD linked oxidase domain protein
LBM341_RS11025	COG0277	FAD linked oxidase domain protein
LBM341_RS11030	COG0247	lactate metabolic process
LBM341_RS11035	COG1380	Effector of murein hydrolase LrgA
LBM341_RS11040	COG1346	cytolysis
LBM341_RS11060	COG0386	Belongs to the glutathione peroxidase family
LBM341_RS11120	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LBM341_RS11125	COG0783	Belongs to the Dps family
LBM341_RS11235	COG1819	glycosyl
LBM341_RS11240	COG1473	amidohydrolase
LBM341_RS11245	COG1522	sequence-specific DNA binding
LBM341_RS11280	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LBM341_RS11285	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LBM341_RS11290	COG0343	queuine tRNA-ribosyltransferase activity
LBM341_RS11295	COG1862	Preprotein translocase
LBM341_RS11300	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LBM341_RS11305	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LBM341_RS11310	COG2353	YceI-like domain
LBM341_RS11315	COG2353	YceI-like domain
LBM341_RS11320	COG3038	cytochrome b561
LBM341_RS11330	COG0625	glutathione transferase activity
LBM341_RS11335	COG0069	glutamate synthase activity
LBM341_RS11340	COG0482	sulfurtransferase activity
LBM341_RS11380	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LBM341_RS11405	COG4191	Histidine kinase
LBM341_RS11410	COG4191	Histidine kinase
LBM341_RS11415	COG2204	response regulator
LBM341_RS11430	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LBM341_RS11435	COG1466	dna polymerase III delta subunit
LBM341_RS11445	COG0495	leucyl-tRNA aminoacylation
LBM341_RS11450	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LBM341_RS11455	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
LBM341_RS11460	COG0735	belongs to the Fur family
LBM341_RS11465	COG0583	DNA-binding transcription factor activity
LBM341_RS11470	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LBM341_RS11475	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LBM341_RS11480	COG4948	Mandelate Racemase Muconate Lactonizing
LBM341_RS11485	COG0800	Aldolase
LBM341_RS11490	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS11510	COG1129	ABC transporter
LBM341_RS11525	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS11530	COG0583	DNA-binding transcription factor activity
LBM341_RS11540	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LBM341_RS11560	COG0281	malic enzyme
LBM341_RS11560	COG0280	phosphate acetyltransferase
LBM341_RS11570	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LBM341_RS11575	COG1546	Belongs to the CinA family
LBM341_RS11575	COG1058	Belongs to the CinA family
LBM341_RS11585	COG0284	orotidine-5'-phosphate decarboxylase activity
LBM341_RS11600	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LBM341_RS11605	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LBM341_RS11615	COG0557	exoribonuclease II activity
LBM341_RS11620	COG3161	chorismate lyase activity
LBM341_RS11625	COG3150	esterase
LBM341_RS11630	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LBM341_RS11640	COG3118	belongs to the thioredoxin family
LBM341_RS11645	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LBM341_RS11650	COG0511	ligase activity, forming carbon-carbon bonds
LBM341_RS11660	COG2264	protein methyltransferase activity
LBM341_RS11670	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LBM341_RS11675	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LBM341_RS11710	COG0840	transmembrane signaling receptor activity
LBM341_RS11745	COG4974	Belongs to the 'phage' integrase family
LBM341_RS11770	COG3023	N-Acetylmuramoyl-L-alanine amidase
LBM341_RS11795	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LBM341_RS11805	COG2095	MarC family integral membrane protein
LBM341_RS11815	COG0741	lytic transglycosylase activity
LBM341_RS11820	COG0442	prolyl-tRNA aminoacylation
LBM341_RS11825	COG0494	nUDIX hydrolase
LBM341_RS11835	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LBM341_RS11840	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LBM341_RS11845	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LBM341_RS11855	COG0142	geranyltranstransferase activity
LBM341_RS11865	COG4536	flavin adenine dinucleotide binding
LBM341_RS11875	COG1459	type II secretion system
LBM341_RS11885	COG0237	dephospho-CoA kinase activity
LBM341_RS11890	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LBM341_RS11895	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
LBM341_RS11900	COG0494	nUDIX hydrolase
LBM341_RS11910	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LBM341_RS11915	COG0653	protein targeting
LBM341_RS11920	COG0739	heme binding
LBM341_RS11930	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
LBM341_RS11935	COG0678	peroxiredoxin activity
LBM341_RS11950	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LBM341_RS11955	COG1181	Belongs to the D-alanine--D-alanine ligase family
LBM341_RS11960	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LBM341_RS11965	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LBM341_RS11975	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LBM341_RS11980	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LBM341_RS11985	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LBM341_RS11990	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LBM341_RS12005	COG0275	rRNA processing
LBM341_RS12010	COG2001	Belongs to the MraZ family
LBM341_RS12015	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
LBM341_RS12020	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS12025	COG0477	Major facilitator Superfamily
LBM341_RS12030	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS12040	COG0243	molybdopterin cofactor binding
LBM341_RS12045	COG1609	Transcriptional regulator
LBM341_RS12050	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LBM341_RS12050	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
LBM341_RS12055	COG1105	Belongs to the carbohydrate kinase PfkB family
LBM341_RS12060	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LBM341_RS12060	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LBM341_RS12070	COG4608	Belongs to the ABC transporter superfamily
LBM341_RS12075	COG0444	Belongs to the ABC transporter superfamily
LBM341_RS12080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LBM341_RS12085	COG0601	transmembrane transport
LBM341_RS12100	COG1473	amidohydrolase
LBM341_RS12130	COG1024	Enoyl-CoA hydratase
LBM341_RS12135	COG1024	Enoyl-CoA hydratase
LBM341_RS12140	COG2050	protein possibly involved in aromatic compounds catabolism
LBM341_RS12160	COG2967	ApaG domain
LBM341_RS12165	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LBM341_RS12170	COG0546	phosphoglycolate phosphatase activity
LBM341_RS12180	COG0512	Glutamine amidotransferase of anthranilate synthase
LBM341_RS12190	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LBM341_RS12195	COG0134	indole-3-glycerol-phosphate synthase activity
LBM341_RS12205	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LBM341_RS12215	COG1289	transmembrane transporter activity
LBM341_RS12225	COG0604	alcohol dehydrogenase
LBM341_RS12235	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LBM341_RS12260	COG0012	GTP binding
LBM341_RS12270	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LBM341_RS12275	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LBM341_RS12285	COG2890	protein-(glutamine-N5) methyltransferase activity
LBM341_RS12290	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
LBM341_RS12305	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LBM341_RS12310	COG2943	transferase activity, transferring hexosyl groups
LBM341_RS12310	COG3416	Protein conserved in bacteria
LBM341_RS12330	COG0488	(ABC) transporter
LBM341_RS12335	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LBM341_RS12350	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LBM341_RS12360	COG3712	iron ion homeostasis
LBM341_RS12365	COG4774	siderophore transport
LBM341_RS12370	COG0405	Gamma-glutamyltransferase
LBM341_RS12395	COG2969	positive regulation of protein catabolic process
LBM341_RS12400	COG0625	glutathione transferase activity
LBM341_RS12405	COG2857	Cytochrome c1
LBM341_RS12410	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LBM341_RS12415	COG0723	plastoquinol--plastocyanin reductase activity
LBM341_RS12420	COG1970	mechanosensitive ion channel activity
LBM341_RS12425	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LBM341_RS12430	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LBM341_RS12435	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS12460	COG1840	ABC-type Fe3 transport system, periplasmic component
LBM341_RS12470	COG3842	ATPase activity
LBM341_RS12475	COG3385	transposase activity
LBM341_RS12480	COG0805	protein transport
LBM341_RS12485	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LBM341_RS12490	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LBM341_RS12500	COG0140	phosphoribosyl-ATP diphosphatase activity
LBM341_RS12505	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LBM341_RS12510	COG0107	imidazoleglycerol-phosphate synthase activity
LBM341_RS12515	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LBM341_RS12520	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LBM341_RS12525	COG2095	MarC family integral membrane protein
LBM341_RS12530	COG0131	Imidazoleglycerol-phosphate dehydratase
LBM341_RS12535	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LBM341_RS12540	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LBM341_RS12545	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LBM341_RS12550	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LBM341_RS12560	COG0842	Transport permease protein
LBM341_RS12565	COG1131	(ABC) transporter
LBM341_RS12585	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LBM341_RS12590	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LBM341_RS12595	COG1127	ABC transporter
LBM341_RS12610	COG0069	glutamate synthase activity
LBM341_RS12610	COG0070	glutamate synthase
LBM341_RS12610	COG0067	glutamate synthase
LBM341_RS12620	COG3047	cAMP biosynthetic process
LBM341_RS12625	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LBM341_RS12630	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LBM341_RS12635	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LBM341_RS12670	COG3385	transposase activity
LBM341_RS12675	COG1965	Belongs to the frataxin family
LBM341_RS12690	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
LBM341_RS12695	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LBM341_RS12715	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LBM341_RS12720	COG1333	cytochrome c biogenesis protein
LBM341_RS12730	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LBM341_RS12740	COG4232	protein-disulfide reductase activity
LBM341_RS12750	COG0203	ribosomal protein L17
LBM341_RS12755	COG0202	RNA polymerase activity
LBM341_RS12760	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LBM341_RS12765	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LBM341_RS12770	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LBM341_RS12775	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LBM341_RS12780	COG0201	protein transport
LBM341_RS12785	COG0200	Binds to the 23S rRNA
LBM341_RS12790	COG1841	ribosomal large subunit assembly
LBM341_RS12795	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LBM341_RS12800	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LBM341_RS12805	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LBM341_RS12810	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LBM341_RS12815	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LBM341_RS12820	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LBM341_RS12825	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LBM341_RS12830	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LBM341_RS12835	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LBM341_RS12840	COG0255	Belongs to the universal ribosomal protein uL29 family
LBM341_RS12845	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LBM341_RS12850	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LBM341_RS12855	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LBM341_RS12860	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LBM341_RS12865	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LBM341_RS12870	COG0089	rRNA binding
LBM341_RS12875	COG0088	Forms part of the polypeptide exit tunnel
LBM341_RS12880	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LBM341_RS12885	COG0051	transcription antitermination factor activity, RNA binding
LBM341_RS12890	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LBM341_RS12895	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LBM341_RS12900	COG0049	tRNA binding
LBM341_RS12905	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LBM341_RS12910	COG0514	ATP-dependent DNA helicase (RecQ)
LBM341_RS12920	COG4676	Protein conserved in bacteria
LBM341_RS12925	COG4676	Protein conserved in bacteria
LBM341_RS12930	COG5445	Predicted secreted protein (DUF2300)
LBM341_RS12935	COG2373	Large extracellular alpha-helical protein
LBM341_RS12940	COG3234	Protein of unknown function (DUF1175)
LBM341_RS12945	COG4685	Uncharacterized protein conserved in bacteria (DUF2138)
LBM341_RS12950	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LBM341_RS12955	COG0085	RNA polymerase activity
LBM341_RS12960	COG0222	ribosome binding
LBM341_RS12965	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LBM341_RS12970	COG0081	regulation of translation
LBM341_RS12975	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LBM341_RS12995	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LBM341_RS13045	COG1349	DNA-binding transcription factor activity
LBM341_RS13055	COG3842	ATPase activity
LBM341_RS13060	COG3842	ATPase activity
LBM341_RS13070	COG0395	ABC-type sugar transport system, permease component
LBM341_RS13085	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LBM341_RS13105	COG2336	PFAM SpoVT AbrB
LBM341_RS13110	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LBM341_RS13140	COG2205	protein histidine kinase activity
LBM341_RS13145	COG0745	RESPONSE REGULATOR receiver
LBM341_RS13160	COG0668	transmembrane transport
LBM341_RS13165	COG2814	Major facilitator Superfamily
LBM341_RS13200	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LBM341_RS13205	COG2197	response regulator
LBM341_RS13240	COG0582	viral genome integration into host DNA
LBM341_RS13325	COG0232	Belongs to the dGTPase family. Type 2 subfamily
LBM341_RS13350	COG0745	RESPONSE REGULATOR receiver
LBM341_RS13360	COG3385	transposase activity
LBM341_RS13365	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS13390	COG0475	glutathione-regulated potassium exporter activity
LBM341_RS13390	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LBM341_RS13415	COG1404	Belongs to the peptidase S8 family
LBM341_RS13420	COG1522	sequence-specific DNA binding
LBM341_RS13535	COG2925	Exonuclease
LBM341_RS13540	COG4302	ethanolamine ammonia-lyase activity
LBM341_RS13545	COG4303	Ethanolamine ammonia lyase large subunit
LBM341_RS13550	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS13555	COG3284	Transcriptional regulator
LBM341_RS13565	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LBM341_RS13590	COG0840	transmembrane signaling receptor activity
LBM341_RS13600	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS13610	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LBM341_RS13625	COG2203	Gaf domain
LBM341_RS13625	COG5001	Diguanylate cyclase
LBM341_RS13625	COG4251	negative regulation of phosphorylation
LBM341_RS13625	COG3706	GGDEF domain
LBM341_RS13690	COG3039	Transposase
LBM341_RS13710	COG1278	Cold shock
LBM341_RS13715	COG3385	transposase activity
LBM341_RS13725	COG0493	'glutamate synthase
LBM341_RS13750	COG0457	Tetratricopeptide repeat
LBM341_RS13765	COG0529	Catalyzes the synthesis of activated sulfate
LBM341_RS13785	COG3039	Transposase
LBM341_RS13840	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LBM341_RS13850	COG3210	domain, Protein
LBM341_RS13875	COG4942	peptidase
LBM341_RS13915	COG3436	PFAM IS66 Orf2 family protein
LBM341_RS13945	COG3209	COG3209 Rhs family protein
LBM341_RS14000	COG3039	Transposase
LBM341_RS14030	COG2916	Histone family protein nucleoid-structuring protein H-NS
LBM341_RS14135	COG2189	Belongs to the N(4) N(6)-methyltransferase family
LBM341_RS14150	COG3609	addiction module antidote protein, CC2985 family
LBM341_RS14220	COG3311	Transcriptional regulator
LBM341_RS14260	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LBM341_RS14270	COG0737	Belongs to the 5'-nucleotidase family
LBM341_RS14275	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LBM341_RS14280	COG2010	Cytochrome c
LBM341_RS14305	COG4654	Cytochrome c, class I
LBM341_RS14315	COG0446	pyridine nucleotide-disulphide oxidoreductase
LBM341_RS14330	COG0792	nuclease activity
LBM341_RS14345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LBM341_RS14370	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LBM341_RS14380	COG4266	Belongs to the allantoicase family
LBM341_RS14385	COG1301	dicarboxylic acid transport
LBM341_RS14395	COG1739	Uncharacterized protein family UPF0029
LBM341_RS14410	COG0583	DNA-binding transcription factor activity
LBM341_RS14415	COG3960	tartronate-semialdehyde synthase activity
LBM341_RS14420	COG3622	Belongs to the hyi family
LBM341_RS14425	COG2084	Dehydrogenase
LBM341_RS14430	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LBM341_RS14440	COG3916	Acyl-homoserine-lactone synthase
LBM341_RS14445	COG2197	response regulator
LBM341_RS14465	COG0210	DNA helicase
LBM341_RS14485	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LBM341_RS14490	COG0509	glycine decarboxylation via glycine cleavage system
LBM341_RS14495	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LBM341_RS14495	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LBM341_RS14500	COG1760	l-serine dehydratase
LBM341_RS14505	COG1297	OPT oligopeptide transporter protein
LBM341_RS14510	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
LBM341_RS14520	COG0683	leucine binding
LBM341_RS14525	COG0506	proline dehydrogenase activity
LBM341_RS14525	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LBM341_RS14525	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
LBM341_RS14530	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LBM341_RS14535	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LBM341_RS14565	COG0625	glutathione transferase activity
LBM341_RS14585	COG1832	CoA-binding protein
LBM341_RS14600	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LBM341_RS14605	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LBM341_RS14610	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LBM341_RS14615	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LBM341_RS14620	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LBM341_RS14625	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LBM341_RS14635	COG0356	it plays a direct role in the translocation of protons across the membrane
LBM341_RS14645	COG1475	DNA binding
LBM341_RS14650	COG1192	Involved in chromosome partitioning
LBM341_RS14655	COG0357	Ribosomal RNA small subunit methyltransferase G
LBM341_RS14660	COG0445	tRNA wobble uridine modification
LBM341_RS14680	COG0583	DNA-binding transcription factor activity
LBM341_RS14685	COG3530	Putative quorum-sensing-regulated virulence factor
LBM341_RS14750	COG2267	carboxylic ester hydrolase activity
LBM341_RS14755	COG0789	Transcriptional regulator
LBM341_RS14760	COG2217	Heavy metal translocating P-type atpase
LBM341_RS14770	COG3047	cAMP biosynthetic process
LBM341_RS14775	COG2423	ornithine cyclodeaminase activity
LBM341_RS14790	COG3186	Phenylalanine-4-hydroxylase
LBM341_RS14795	COG2154	pterin-4-alpha-carbinolamine dehydratase
LBM341_RS14820	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LBM341_RS14830	COG0737	Belongs to the 5'-nucleotidase family
LBM341_RS14835	COG0850	regulation of cytokinetic process
LBM341_RS14840	COG2894	cell division
LBM341_RS14845	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
LBM341_RS14860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LBM341_RS14865	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
LBM341_RS14875	COG1254	Belongs to the acylphosphatase family
LBM341_RS14885	COG1116	anion transmembrane transporter activity
LBM341_RS14930	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LBM341_RS14935	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LBM341_RS14940	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
LBM341_RS14945	COG2205	protein histidine kinase activity
LBM341_RS14955	COG5001	Diguanylate cyclase
LBM341_RS14955	COG2203	Gaf domain
LBM341_RS14955	COG4251	negative regulation of phosphorylation
LBM341_RS14955	COG3706	GGDEF domain
LBM341_RS14975	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LBM341_RS14980	COG0745	RESPONSE REGULATOR receiver
LBM341_RS15005	COG1959	2 iron, 2 sulfur cluster binding
LBM341_RS15020	COG2814	Major facilitator Superfamily
LBM341_RS15030	COG0642	Histidine kinase
LBM341_RS15035	COG0745	RESPONSE REGULATOR receiver
LBM341_RS15050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS15055	COG1126	abc transporter atp-binding protein
LBM341_RS15085	COG3781	membrane
LBM341_RS15115	COG3039	Transposase
LBM341_RS15145	COG3385	transposase activity
LBM341_RS15155	COG0592	DNA-directed DNA polymerase activity
LBM341_RS15160	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LBM341_RS15165	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LBM341_RS15170	COG0594	ribonuclease P activity
LBM341_RS15175	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LBM341_RS15180	COG0706	membrane insertase activity
LBM341_RS15185	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LBM341_RS15200	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LBM341_RS15210	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LBM341_RS15215	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS15220	COG1309	transcriptional regulator
LBM341_RS15235	COG3384	dioxygenase
LBM341_RS15240	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LBM341_RS15245	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
LBM341_RS15250	COG0745	RESPONSE REGULATOR receiver
LBM341_RS15260	COG3622	Belongs to the hyi family
LBM341_RS15275	COG1966	Carbon starvation protein
LBM341_RS15280	COG2879	small protein
LBM341_RS15295	COG3385	transposase activity
LBM341_RS15305	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LBM341_RS15315	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LBM341_RS15325	COG3385	transposase activity
LBM341_RS15340	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LBM341_RS15345	COG1595	DNA-templated transcription, initiation
LBM341_RS15375	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
LBM341_RS15385	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LBM341_RS15390	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LBM341_RS15395	COG0747	negative chemotaxis
LBM341_RS15410	COG0523	cobalamin synthesis protein
LBM341_RS15430	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LBM341_RS15435	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LBM341_RS15445	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LBM341_RS15460	COG0154	amidase activity
LBM341_RS15465	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LBM341_RS15470	COG1077	Cell shape determining protein MreB Mrl
LBM341_RS15475	COG1792	Involved in formation and maintenance of cell shape
LBM341_RS15485	COG0768	penicillin binding
LBM341_RS15490	COG0772	Belongs to the SEDS family
LBM341_RS15495	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS15500	COG0583	DNA-binding transcription factor activity
LBM341_RS15515	COG0758	DNA mediated transformation
LBM341_RS15520	COG1652	LysM domain
LBM341_RS15525	COG0242	peptide deformylase activity
LBM341_RS15535	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LBM341_RS15545	COG0501	Belongs to the peptidase M48B family
LBM341_RS15560	COG5000	phosphorelay sensor kinase activity
LBM341_RS15565	COG2204	response regulator
LBM341_RS15590	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LBM341_RS15595	COG3246	L-lysine catabolic process to acetate
LBM341_RS15600	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LBM341_RS15605	COG0617	tRNA 3'-terminal CCA addition
LBM341_RS15625	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LBM341_RS15635	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LBM341_RS15640	COG1950	PFAM Membrane protein of
LBM341_RS15645	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
LBM341_RS15660	COG1785	Belongs to the alkaline phosphatase family
LBM341_RS15665	COG1785	Belongs to the alkaline phosphatase family
LBM341_RS15675	COG0351	phosphomethylpyrimidine kinase
LBM341_RS15700	COG2764	glyoxalase bleomycin resistance protein dioxygenase
LBM341_RS15710	COG2022	thiamine diphosphate biosynthetic process
LBM341_RS15725	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LBM341_RS15730	COG2070	2-Nitropropane dioxygenase
LBM341_RS15765	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS15805	COG1522	sequence-specific DNA binding
LBM341_RS15815	COG0517	IMP dehydrogenase activity
LBM341_RS15835	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LBM341_RS15845	COG1560	Kdo2-lipid A biosynthetic process
LBM341_RS15850	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LBM341_RS15855	COG2326	polyphosphate kinase activity
LBM341_RS15860	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LBM341_RS15865	COG0708	Exodeoxyribonuclease III
LBM341_RS15870	COG4682	membrane
LBM341_RS15875	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LBM341_RS15895	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LBM341_RS15920	COG0697	spore germination
LBM341_RS15935	COG2223	nitrite transmembrane transporter activity
LBM341_RS15960	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LBM341_RS15965	COG0583	DNA-binding transcription factor activity
LBM341_RS15970	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS15985	COG1131	(ABC) transporter
LBM341_RS15990	COG0842	Transport permease protein
LBM341_RS16005	COG0493	'glutamate synthase
LBM341_RS16030	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
LBM341_RS16030	COG0546	phosphoglycolate phosphatase activity
LBM341_RS16035	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LBM341_RS16040	COG0037	tRNA processing
LBM341_RS16050	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LBM341_RS16055	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LBM341_RS16060	COG0589	response to stress
LBM341_RS16080	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LBM341_RS16085	COG3039	Transposase
LBM341_RS16155	COG1674	ftsk spoiiie
LBM341_RS16175	COG5434	Belongs to the glycosyl hydrolase 28 family
LBM341_RS16200	COG4886	Leucine-rich repeat (LRR) protein
LBM341_RS16205	COG1450	Type ii and iii secretion system protein
LBM341_RS16210	COG2207	Transcriptional regulator
LBM341_RS16255	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LBM341_RS16260	COG4789	Type iii secretion
LBM341_RS16275	COG4790	Type iii secretion
LBM341_RS16315	COG0745	RESPONSE REGULATOR receiver
LBM341_RS16320	COG2197	response regulator
LBM341_RS16330	COG1595	DNA-templated transcription, initiation
LBM341_RS16380	COG0840	transmembrane signaling receptor activity
LBM341_RS16405	COG1056	cytidyltransferase-related domain
LBM341_RS16405	COG1051	belongs to the nudix hydrolase family
LBM341_RS16410	COG2271	Major facilitator Superfamily
LBM341_RS16425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LBM341_RS16430	COG2721	sulfolactate sulfo-lyase activity
LBM341_RS16440	COG2271	Major facilitator Superfamily
LBM341_RS16450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LBM341_RS16455	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LBM341_RS16465	COG0583	DNA-binding transcription factor activity
LBM341_RS16490	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LBM341_RS16500	COG1309	transcriptional regulator
LBM341_RS16510	COG0579	oxidoreductase
LBM341_RS16525	COG4206	TonB-dependent receptor
LBM341_RS16530	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LBM341_RS16545	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
LBM341_RS16560	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LBM341_RS16570	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LBM341_RS16575	COG3620	sequence-specific DNA binding
LBM341_RS16580	COG0587	DNA-directed DNA polymerase activity
LBM341_RS16600	COG2814	Major facilitator Superfamily
LBM341_RS16615	COG0436	Aminotransferase
LBM341_RS16630	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS16630	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS16630	COG0300	oxidoreductase activity
LBM341_RS16630	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LBM341_RS16630	COG3321	synthase
LBM341_RS16645	COG2192	nodulation
LBM341_RS16650	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS16675	COG0525	valine-tRNA ligase activity
LBM341_RS16690	COG3916	Acyl-homoserine-lactone synthase
LBM341_RS16695	COG2197	response regulator
LBM341_RS16810	COG3039	Transposase
LBM341_RS16840	COG3501	Rhs element vgr protein
LBM341_RS16900	COG3501	Rhs element vgr protein
LBM341_RS16925	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
LBM341_RS16950	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
LBM341_RS16970	COG1730	sister chromatid segregation
LBM341_RS16975	COG1858	cytochrome C peroxidase
LBM341_RS17060	COG1690	Belongs to the RtcB family
LBM341_RS17065	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LBM341_RS17090	COG3483	tryptophan 2,3-dioxygenase activity
LBM341_RS17105	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
LBM341_RS17125	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS17155	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LBM341_RS17160	COG0134	indole-3-glycerol-phosphate synthase activity
LBM341_RS17165	COG0019	diaminopimelate decarboxylase activity
LBM341_RS17170	COG0259	pyridoxamine-phosphate oxidase activity
LBM341_RS17175	COG0583	DNA-binding transcription factor activity
LBM341_RS17180	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LBM341_RS17205	COG1024	Enoyl-CoA hydratase
LBM341_RS17230	COG2807	transmembrane transport
LBM341_RS17235	COG2818	Glycosylase
LBM341_RS17250	COG2814	Major facilitator Superfamily
LBM341_RS17260	COG1335	isochorismatase
LBM341_RS17270	COG1846	Transcriptional regulator
LBM341_RS17275	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS17300	COG0745	RESPONSE REGULATOR receiver
LBM341_RS17305	COG5002	protein histidine kinase activity
LBM341_RS17315	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS17320	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LBM341_RS17340	COG1024	Enoyl-CoA hydratase
LBM341_RS17345	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LBM341_RS17390	COG3251	PFAM MbtH domain protein
LBM341_RS17395	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LBM341_RS17410	COG4941	Belongs to the sigma-70 factor family
LBM341_RS17415	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
LBM341_RS17435	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
LBM341_RS17440	COG3411	Ferredoxin
LBM341_RS17455	COG1648	precorrin-2 dehydrogenase activity
LBM341_RS17455	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
LBM341_RS17460	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
LBM341_RS17465	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
LBM341_RS17500	COG1797	cobyrinic acid a,c-diamide synthase activity
LBM341_RS17505	COG0778	Nitroreductase
LBM341_RS17535	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LBM341_RS17540	COG2151	metal-sulfur cluster biosynthetic enzyme
LBM341_RS17545	COG3396	Phenylacetate-CoA oxygenase
LBM341_RS17550	COG3460	Phenylacetate-CoA oxygenase
LBM341_RS17555	COG3396	Phenylacetate-CoA oxygenase
LBM341_RS17570	COG3039	Transposase
LBM341_RS17580	COG2951	lytic endotransglycosylase activity
LBM341_RS17590	COG1271	oxidase subunit
LBM341_RS17595	COG1294	oxidase, subunit
LBM341_RS17600	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LBM341_RS17610	COG0251	oxidation-reduction process
LBM341_RS17645	COG3550	peptidyl-serine autophosphorylation
LBM341_RS17665	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LBM341_RS17680	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LBM341_RS17685	COG0730	response to heat
LBM341_RS17690	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LBM341_RS17700	COG0583	DNA-binding transcription factor activity
LBM341_RS17705	COG0730	response to heat
LBM341_RS17735	COG3039	Transposase
LBM341_RS17745	COG3039	Transposase
LBM341_RS17810	COG5444	nuclease activity
LBM341_RS17820	COG3501	Rhs element vgr protein
LBM341_RS17830	COG2197	response regulator
LBM341_RS17840	COG2066	Belongs to the glutaminase family
LBM341_RS17845	COG4149	molybdate abc transporter
LBM341_RS17850	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
LBM341_RS17860	COG5001	Diguanylate cyclase
LBM341_RS17860	COG3300	MHYT domain
LBM341_RS17880	COG3813	Protein conserved in bacteria
LBM341_RS17895	COG0745	RESPONSE REGULATOR receiver
LBM341_RS17900	COG2205	protein histidine kinase activity
LBM341_RS17930	COG1858	cytochrome C peroxidase
LBM341_RS17950	COG1253	flavin adenine dinucleotide binding
LBM341_RS17955	COG1858	cytochrome C peroxidase
LBM341_RS17980	COG2205	protein histidine kinase activity
LBM341_RS17980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LBM341_RS17995	COG2274	protein secretion by the type I secretion system
LBM341_RS18020	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
LBM341_RS18035	COG0800	Aldolase
LBM341_RS18040	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LBM341_RS18045	COG2197	response regulator
LBM341_RS18065	COG0745	RESPONSE REGULATOR receiver
LBM341_RS18110	COG1294	oxidase, subunit
LBM341_RS18115	COG1271	oxidase subunit
LBM341_RS18120	COG5001	Diguanylate cyclase
LBM341_RS18120	COG3300	MHYT domain
LBM341_RS18125	COG0840	transmembrane signaling receptor activity
LBM341_RS18135	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LBM341_RS18145	COG0534	Mate efflux family protein
LBM341_RS18160	COG0243	molybdopterin cofactor binding
LBM341_RS18165	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LBM341_RS18175	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LBM341_RS18180	COG2223	nitrite transmembrane transporter activity
LBM341_RS18185	COG0840	transmembrane signaling receptor activity
LBM341_RS18190	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LBM341_RS18200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LBM341_RS18220	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LBM341_RS18225	COG0436	Aminotransferase
LBM341_RS18230	COG0473	3-isopropylmalate dehydrogenase activity
LBM341_RS18230	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LBM341_RS18270	COG3039	Transposase
LBM341_RS18305	COG0840	transmembrane signaling receptor activity
LBM341_RS18310	COG0567	Dehydrogenase, E1 component
LBM341_RS18315	COG0204	Acyl-transferase
LBM341_RS18330	COG4263	nitrous-oxide reductase activity
LBM341_RS18385	COG2831	hemolysin activation secretion protein
LBM341_RS18420	COG2824	Alkylphosphonate utilization operon protein PhnA
LBM341_RS18435	COG0762	integral membrane protein
LBM341_RS18460	COG1191	sigma factor activity
LBM341_RS18475	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LBM341_RS18485	COG1309	transcriptional regulator
LBM341_RS18490	COG2271	Major facilitator Superfamily
LBM341_RS18495	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
LBM341_RS18500	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LBM341_RS18505	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS18515	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
LBM341_RS18520	COG0745	RESPONSE REGULATOR receiver
LBM341_RS18525	COG2201	protein-glutamate methylesterase activity
LBM341_RS18530	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
LBM341_RS18540	COG0840	transmembrane signaling receptor activity
LBM341_RS18545	COG0835	chemotaxis
LBM341_RS18555	COG0745	RESPONSE REGULATOR receiver
LBM341_RS18560	COG1360	Flagellar Motor Protein
LBM341_RS18590	COG0477	Major facilitator Superfamily
LBM341_RS18665	COG0776	regulation of translation
LBM341_RS18685	COG3039	Transposase
LBM341_RS18695	COG3039	Transposase
LBM341_RS18700	COG1804	L-carnitine dehydratase bile acid-inducible protein F
LBM341_RS18710	COG0644	oxidoreductase
LBM341_RS18715	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LBM341_RS18720	COG3486	L-lysine 6-monooxygenase (NADPH) activity
LBM341_RS18750	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LBM341_RS18750	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS18785	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LBM341_RS18785	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LBM341_RS18790	COG1045	serine acetyltransferase
LBM341_RS18825	COG3039	Transposase
LBM341_RS18835	COG3039	Transposase
LBM341_RS18875	COG0667	Aldo Keto reductase
LBM341_RS18960	COG2192	nodulation
LBM341_RS18975	COG4651	solute:proton antiporter activity
LBM341_RS18975	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LBM341_RS19025	COG2188	Transcriptional regulator
LBM341_RS19030	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
LBM341_RS19035	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LBM341_RS19070	COG0583	DNA-binding transcription factor activity
LBM341_RS19145	COG0705	Rhomboid family
LBM341_RS19170	COG3491	Belongs to the iron ascorbate-dependent oxidoreductase family
LBM341_RS19190	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LBM341_RS19200	COG3210	domain, Protein
LBM341_RS19240	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LBM341_RS19245	COG0642	Histidine kinase
LBM341_RS19250	COG0745	RESPONSE REGULATOR receiver
LBM341_RS19265	COG0837	glucose binding
LBM341_RS19275	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LBM341_RS19285	COG0589	response to stress
LBM341_RS19300	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LBM341_RS19305	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LBM341_RS19315	COG1845	cytochrome c oxidase, subunit III
LBM341_RS19340	COG2271	Major facilitator Superfamily
LBM341_RS19355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LBM341_RS19365	COG0765	amino acid transport
LBM341_RS19370	COG0010	Belongs to the arginase family
LBM341_RS19375	COG2197	response regulator
LBM341_RS19395	COG4677	pectinesterase activity
LBM341_RS19405	COG1902	pentaerythritol trinitrate reductase activity
LBM341_RS19405	COG0446	pyridine nucleotide-disulphide oxidoreductase
LBM341_RS19420	COG0697	spore germination
LBM341_RS19480	COG3039	Transposase
LBM341_RS19485	COG0210	DNA helicase
LBM341_RS19490	COG3039	Transposase
LBM341_RS19545	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LBM341_RS19590	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LBM341_RS19615	COG4796	Type ii and iii secretion system protein
LBM341_RS19625	COG4968	Prepilin-type N-terminal cleavage methylation domain
LBM341_RS19660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LBM341_RS19665	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS19675	COG0583	DNA-binding transcription factor activity
LBM341_RS19700	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS19705	COG2814	Major facilitator Superfamily
LBM341_RS19715	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS19785	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS19790	COG0473	3-isopropylmalate dehydrogenase activity
LBM341_RS19800	COG2271	Major facilitator Superfamily
LBM341_RS19805	COG2721	sulfolactate sulfo-lyase activity
LBM341_RS19815	COG1475	DNA binding
LBM341_RS19825	COG3969	phosphoadenosine phosphosulfate
LBM341_RS19830	COG5295	Hep Hag repeat protein
LBM341_RS19840	COG2205	protein histidine kinase activity
LBM341_RS19840	COG0784	Response regulator, receiver
LBM341_RS19845	COG2203	Gaf domain
LBM341_RS19845	COG5001	Diguanylate cyclase
LBM341_RS19845	COG3706	GGDEF domain
LBM341_RS19845	COG4251	negative regulation of phosphorylation
LBM341_RS19905	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
LBM341_RS19915	COG4213	ABC transporter substrate-binding protein
LBM341_RS19920	COG1129	ABC transporter
LBM341_RS19925	COG4214	carbohydrate transport
LBM341_RS19930	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LBM341_RS19935	COG1609	Transcriptional regulator
LBM341_RS19945	COG2207	Transcriptional regulator
LBM341_RS19990	COG1595	DNA-templated transcription, initiation
LBM341_RS20020	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
LBM341_RS20030	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LBM341_RS20045	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LBM341_RS20080	COG2204	response regulator
LBM341_RS20090	COG3039	Transposase
LBM341_RS20100	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LBM341_RS20120	COG2205	protein histidine kinase activity
LBM341_RS20130	COG2252	PERMEase
LBM341_RS20140	COG1278	Cold shock
LBM341_RS20165	COG0477	Major facilitator Superfamily
LBM341_RS20170	COG4191	Histidine kinase
LBM341_RS20180	COG4377	Putative membrane peptidase family (DUF2324)
LBM341_RS20240	COG1960	acyl-CoA dehydrogenase activity
LBM341_RS20245	COG1024	Enoyl-CoA hydratase
LBM341_RS20255	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS20275	COG2916	Histone family protein nucleoid-structuring protein H-NS
LBM341_RS20300	COG1881	PFAM PEBP family protein
LBM341_RS20310	COG0038	chloride channel
LBM341_RS20365	COG0477	Major facilitator Superfamily
LBM341_RS20370	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LBM341_RS20375	COG3657	addiction module killer protein
LBM341_RS20380	COG2814	Major facilitator Superfamily
LBM341_RS20415	COG0725	ABC transporter, periplasmic molybdate-binding protein
LBM341_RS20430	COG0714	Associated with various cellular activities
LBM341_RS20445	COG0288	reversible hydration of carbon dioxide
LBM341_RS20495	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LBM341_RS20505	COG2944	sequence-specific DNA binding
LBM341_RS20515	COG3039	Transposase
LBM341_RS20530	COG1607	acyl-coa hydrolase
LBM341_RS20560	COG0529	Catalyzes the synthesis of activated sulfate
LBM341_RS20570	COG3251	PFAM MbtH domain protein
LBM341_RS20575	COG0534	Mate efflux family protein
LBM341_RS20585	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
LBM341_RS20630	COG3039	Transposase
LBM341_RS20640	COG3039	Transposase
LBM341_RS20665	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LBM341_RS20680	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LBM341_RS20700	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS20710	COG0028	Belongs to the TPP enzyme family
LBM341_RS20745	COG1846	Transcriptional regulator
LBM341_RS20750	COG1024	Enoyl-CoA hydratase
LBM341_RS20755	COG1012	belongs to the aldehyde dehydrogenase family
LBM341_RS20795	COG2814	Major facilitator Superfamily
LBM341_RS20805	COG1640	4-alpha-glucanotransferase
LBM341_RS20810	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LBM341_RS20820	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LBM341_RS20825	COG0366	Alpha amylase catalytic
LBM341_RS20830	COG0366	Alpha amylase catalytic
LBM341_RS20835	COG0297	glycogen (starch) synthase activity
LBM341_RS20840	COG3720	iron ion transport
LBM341_RS20845	COG4771	TonB-dependent receptor
LBM341_RS20855	COG3634	alkyl hydroperoxide reductase activity
LBM341_RS20860	COG0735	belongs to the Fur family
LBM341_RS20880	COG1918	ferrous iron import across plasma membrane
LBM341_RS20880	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LBM341_RS20890	COG5001	Diguanylate cyclase
LBM341_RS20890	COG3447	MASE1 domain protein
LBM341_RS20890	COG5002	protein histidine kinase activity
LBM341_RS20900	COG0840	transmembrane signaling receptor activity
LBM341_RS20920	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LBM341_RS20935	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
LBM341_RS20945	COG0454	-acetyltransferase
LBM341_RS20945	COG0456	acetyltransferase
LBM341_RS20985	COG3039	Transposase
LBM341_RS21015	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
LBM341_RS21030	COG3706	GGDEF domain
LBM341_RS21035	COG0531	amino acid
LBM341_RS21040	COG0534	Mate efflux family protein
LBM341_RS21050	COG2197	response regulator
LBM341_RS21060	COG0726	polysaccharide deacetylase
LBM341_RS21060	COG1649	PFAM Uncharacterised BCR, COG1649
LBM341_RS21065	COG1215	transferase activity, transferring glycosyl groups
LBM341_RS21080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS21085	COG2274	protein secretion by the type I secretion system
LBM341_RS21115	COG0840	transmembrane signaling receptor activity
LBM341_RS21125	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS21135	COG2070	2-Nitropropane dioxygenase
LBM341_RS21140	COG0583	DNA-binding transcription factor activity
LBM341_RS21145	COG1695	Transcriptional regulator
LBM341_RS21160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LBM341_RS21165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS21170	COG0745	RESPONSE REGULATOR receiver
LBM341_RS21175	COG2205	protein histidine kinase activity
LBM341_RS21190	COG0589	response to stress
LBM341_RS21225	COG0789	Transcriptional regulator
LBM341_RS21235	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LBM341_RS21255	COG1764	response to oxidative stress
LBM341_RS21270	COG0473	3-isopropylmalate dehydrogenase activity
LBM341_RS21300	COG2916	Histone family protein nucleoid-structuring protein H-NS
LBM341_RS21305	COG2188	Transcriptional regulator
LBM341_RS21310	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
LBM341_RS21325	COG3039	Transposase
LBM341_RS21350	COG1815	bacterial-type flagellum-dependent cell motility
LBM341_RS21360	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
LBM341_RS21365	COG1749	Flagellar hook protein flgE
LBM341_RS21370	COG4787	bacterial-type flagellum-dependent cell motility
LBM341_RS21380	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
LBM341_RS21385	COG1706	bacterial-type flagellum-dependent cell motility
LBM341_RS21395	COG1256	bacterial-type flagellum assembly
LBM341_RS21415	COG2226	methyltransferase
LBM341_RS21430	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LBM341_RS21435	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS21445	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LBM341_RS21465	COG2986	histidine ammonia-lyase
LBM341_RS21475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LBM341_RS21485	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LBM341_RS21495	COG0204	Acyl-transferase
LBM341_RS21510	COG1987	bacterial-type flagellum assembly
LBM341_RS21515	COG1338	Plays a role in the flagellum-specific transport system
LBM341_RS21545	COG2197	response regulator
LBM341_RS21570	COG1846	Transcriptional regulator
LBM341_RS21585	COG1677	Flagellar hook-basal body complex protein FliE
LBM341_RS21595	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LBM341_RS21630	COG3706	GGDEF domain
LBM341_RS21630	COG2203	Gaf domain
LBM341_RS21630	COG5001	Diguanylate cyclase
LBM341_RS21630	COG4251	negative regulation of phosphorylation
LBM341_RS21640	COG5001	Diguanylate cyclase
LBM341_RS21640	COG4251	negative regulation of phosphorylation
LBM341_RS21640	COG3706	GGDEF domain
LBM341_RS21640	COG2203	Gaf domain
LBM341_RS21660	COG3385	transposase activity
LBM341_RS21685	COG0318	PFAM AMP-dependent synthetase and ligase
LBM341_RS21735	COG4774	siderophore transport
LBM341_RS21750	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LBM341_RS21755	COG2423	ornithine cyclodeaminase activity
LBM341_RS21760	COG4264	IucA IucC family
LBM341_RS21765	COG2814	Major facilitator Superfamily
LBM341_RS21770	COG4264	IucA IucC family
LBM341_RS21775	COG4264	IucA IucC family
LBM341_RS21785	COG0019	diaminopimelate decarboxylase activity
LBM341_RS21865	COG0583	DNA-binding transcription factor activity
LBM341_RS21870	COG1126	abc transporter atp-binding protein
LBM341_RS21880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LBM341_RS21885	COG1522	sequence-specific DNA binding
LBM341_RS21890	COG2423	ornithine cyclodeaminase activity
LBM341_RS21945	COG0537	adenosine 5'-monophosphoramidase activity
LBM341_RS21990	COG3039	Transposase
LBM341_RS21995	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LBM341_RS22005	COG0840	transmembrane signaling receptor activity
LBM341_RS22020	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LBM341_RS22040	COG0668	transmembrane transport
LBM341_RS22075	COG3039	Transposase
LBM341_RS22105	COG0402	S-adenosylhomocysteine deaminase activity
LBM341_RS22115	COG3039	Transposase
LBM341_RS22155	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LBM341_RS22180	COG0683	leucine binding
LBM341_RS22185	COG3039	Transposase
LBM341_RS22200	COG3766	membrane
LBM341_RS22220	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LBM341_RS22250	COG4968	Prepilin-type N-terminal cleavage methylation domain
LBM341_RS22255	COG1609	Transcriptional regulator
LBM341_RS22265	COG1621	beta-fructofuranosidase activity
LBM341_RS22290	COG0114	fumarate hydratase activity
LBM341_RS22295	COG0477	Major facilitator Superfamily
LBM341_RS22320	COG1742	UPF0060 membrane protein
LBM341_RS22325	COG0668	transmembrane transport
LBM341_RS22330	COG3039	Transposase
LBM341_RS22345	COG0300	oxidoreductase activity
LBM341_RS22375	COG3501	Rhs element vgr protein
LBM341_RS22380	COG3706	GGDEF domain
LBM341_RS22385	COG1914	H( )-stimulated, divalent metal cation uptake system
LBM341_RS22390	COG0443	Heat shock 70 kDa protein
LBM341_RS22410	COG2910	NAD(P)H-binding
LBM341_RS22465	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LBM341_RS22500	COG1404	Belongs to the peptidase S8 family
LBM341_RS22525	COG0835	chemotaxis
LBM341_RS22525	COG0784	Response regulator, receiver
LBM341_RS22535	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LBM341_RS22585	COG0640	Transcriptional regulator
LBM341_RS22590	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LBM341_RS22595	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LBM341_RS22605	COG1064	alcohol dehydrogenase
LBM341_RS22640	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
LBM341_RS22660	COG1064	alcohol dehydrogenase
LBM341_RS22670	COG0583	DNA-binding transcription factor activity
LBM341_RS22680	COG3321	synthase
LBM341_RS22680	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS22680	COG0604	alcohol dehydrogenase
LBM341_RS22690	COG2030	dehydratase
LBM341_RS22730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LBM341_RS22740	COG0583	DNA-binding transcription factor activity
LBM341_RS22755	COG1764	response to oxidative stress
LBM341_RS22760	COG1846	Transcriptional regulator
LBM341_RS22765	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
LBM341_RS22770	COG1877	trehalose-phosphatase activity
LBM341_RS22780	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LBM341_RS22805	COG2197	response regulator
LBM341_RS22845	COG4964	Belongs to the GSP D family
LBM341_RS22900	COG0673	inositol 2-dehydrogenase activity
LBM341_RS22905	COG2831	hemolysin activation secretion protein
LBM341_RS22975	COG0673	inositol 2-dehydrogenase activity
LBM341_RS22985	COG1028	Short-chain dehydrogenase reductase Sdr
LBM341_RS22990	COG4689	acetoacetate decarboxylase
LBM341_RS23015	COG1278	Cold shock
LBM341_RS23020	COG3158	transport of potassium into the cell
LBM341_RS23025	COG5001	Diguanylate cyclase
LBM341_RS23025	COG3300	MHYT domain
LBM341_RS23030	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LBM341_RS23040	COG0243	molybdopterin cofactor binding
LBM341_RS23045	COG2223	nitrite transmembrane transporter activity
LBM341_RS23070	COG0745	RESPONSE REGULATOR receiver
LBM341_RS23105	COG3220	belongs to the UPF0276 family
LBM341_RS23155	COG0840	transmembrane signaling receptor activity
LBM341_RS23195	COG3039	Transposase
LBM341_RS23200	COG1596	polysaccharide export
LBM341_RS23205	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LBM341_RS23210	COG0489	protein tyrosine kinase activity
LBM341_RS23210	COG3206	protein involved in exopolysaccharide biosynthesis
LBM341_RS23215	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LBM341_RS23220	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
LBM341_RS23225	COG2244	polysaccharide biosynthetic process
LBM341_RS23240	COG0110	maltose O-acetyltransferase activity
LBM341_RS23260	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LBM341_RS23270	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LBM341_RS23285	COG3039	Transposase
LBM341_RS23330	COG1301	dicarboxylic acid transport
LBM341_RS23335	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LBM341_RS23355	COG1999	signal sequence binding
LBM341_RS23365	COG3039	Transposase
LBM341_RS23370	COG1454	alcohol dehydrogenase
LBM341_RS23375	COG0477	Major facilitator Superfamily
LBM341_RS23380	COG0352	thiamine-phosphate diphosphorylase activity
LBM341_RS23400	COG2197	response regulator
LBM341_RS23405	COG3850	Histidine kinase
LBM341_RS23410	COG1763	Mo-molybdopterin cofactor biosynthetic process
LBM341_RS23415	COG2181	nitrate reductase activity
LBM341_RS23420	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LBM341_RS23425	COG1140	nitrate reductase beta subunit
LBM341_RS23430	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LBM341_RS23435	COG2223	nitrite transmembrane transporter activity
LBM341_RS23450	COG0826	peptidase U32
LBM341_RS23455	COG0826	peptidase U32
LBM341_RS23460	COG3154	lipid carrier protein
LBM341_RS23485	COG1396	sequence-specific DNA binding
LBM341_RS23495	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LBM341_RS23500	COG3604	Transcriptional regulator
LBM341_RS23505	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
LBM341_RS23565	COG0583	DNA-binding transcription factor activity
LBM341_RS23570	COG3485	protocatechuate 3,4-dioxygenase
LBM341_RS23575	COG3485	protocatechuate 3,4-dioxygenase
LBM341_RS23595	COG3550	peptidyl-serine autophosphorylation
LBM341_RS23610	COG0602	queuosine metabolic process
LBM341_RS23615	COG0720	synthase
LBM341_RS23625	COG1619	proteins homologs of microcin C7 resistance protein MccF
LBM341_RS23630	COG0488	(ABC) transporter
LBM341_RS23655	COG3387	PFAM Glycoside hydrolase 15-related
LBM341_RS23665	COG0840	transmembrane signaling receptor activity
LBM341_RS23680	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LBM341_RS23715	COG3045	CreA protein
LBM341_RS23750	COG0156	8-amino-7-oxononanoate synthase activity
LBM341_RS23755	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LBM341_RS23800	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LBM341_RS23810	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LBM341_RS23835	COG2814	Major facilitator Superfamily
LBM341_RS23925	COG4974	Belongs to the 'phage' integrase family
LBM341_RS23960	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LBM341_RS23985	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
LBM341_RS24035	COG0179	Fumarylacetoacetate (FAA) hydrolase
LBM341_RS24075	COG0456	acetyltransferase
LBM341_RS24100	COG3433	isochorismatase activity
LBM341_RS24100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LBM341_RS24100	COG2226	methyltransferase
LBM341_RS24120	COG4771	TonB-dependent receptor
LBM341_RS24125	COG3433	isochorismatase activity
LBM341_RS24125	COG2226	methyltransferase
LBM341_RS24125	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LBM341_RS24135	COG2226	methyltransferase
LBM341_RS24140	COG0038	chloride channel
LBM341_RS24180	COG3023	N-Acetylmuramoyl-L-alanine amidase
LBM341_RS24185	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LBM341_RS24190	COG3842	ATPase activity
LBM341_RS24195	COG4208	sulfate ABC transporter
LBM341_RS24205	COG1840	ABC-type Fe3 transport system, periplasmic component
LBM341_RS24210	COG1609	Transcriptional regulator
LBM341_RS24215	COG1262	PFAM Formylglycine-generating sulfatase enzyme
LBM341_RS24225	COG0084	hydrolase, TatD family'
LBM341_RS24235	COG0470	DNA polymerase III
LBM341_RS24240	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LBM341_RS24245	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LBM341_RS24265	COG2831	hemolysin activation secretion protein
LBM341_RS24375	COG4680	protein conserved in bacteria
LBM341_RS24590	COG1278	Cold shock
LBM341_RS24635	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LBM341_RS24655	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LBM341_RS24780	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LBM341_RS24925	COG5297	Belongs to the glycosyl hydrolase family 6
LBM341_RS25235	COG5297	Belongs to the glycosyl hydrolase family 6
LBM341_RS25660	COG1396	sequence-specific DNA binding