locus-tag class description CCY86_RS00005 PF00468 Ribosomal protein L34 CCY86_RS00010 PF00825 Ribonuclease P CCY86_RS00015 PF01809 Putative membrane protein insertion efficiency factor CCY86_RS00020 PF14849 YidC periplasmic domain CCY86_RS00020 PF02096 60Kd inner membrane protein CCY86_RS00025 PF10396 GTP-binding protein TrmE N-terminus CCY86_RS00025 PF12631 MnmE helical domain CCY86_RS00025 PF01926 50S ribosome-binding GTPase CCY86_RS00045 PF00149 Calcineurin-like phosphoesterase CCY86_RS00045 PF10518 TAT (twin-arginine translocation) pathway signal sequence CCY86_RS00055 PF01165 Ribosomal protein S21 CCY86_RS00060 PF02321 Outer membrane efflux protein CCY86_RS00065 PF00873 AcrB/AcrD/AcrF family CCY86_RS00070 PF00529 HlyD membrane-fusion protein of T1SS CCY86_RS00070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS00075 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS00075 PF08361 MAATS-type transcriptional repressor, C-terminal region CCY86_RS00085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCY86_RS00085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS00090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CCY86_RS00095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS00095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCY86_RS00105 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CCY86_RS00105 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CCY86_RS00110 PF00072 Response regulator receiver domain CCY86_RS00110 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS00120 PF01261 Xylose isomerase-like TIM barrel CCY86_RS00125 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS00125 PF00072 Response regulator receiver domain CCY86_RS00130 PF17200 Single Cache domain 2 CCY86_RS00130 PF07730 Histidine kinase CCY86_RS00135 PF13722 5TM C-terminal transporter carbon starvation CstA CCY86_RS00135 PF02554 Carbon starvation protein CstA CCY86_RS00140 PF04328 Selenoprotein, putative CCY86_RS00160 PF00561 alpha/beta hydrolase fold CCY86_RS00165 PF00171 Aldehyde dehydrogenase family CCY86_RS00170 PF00202 Aminotransferase class-III CCY86_RS00175 PF00155 Aminotransferase class I and II CCY86_RS00175 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS00190 PF04185 Phosphoesterase family CCY86_RS00195 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS00205 PF00696 Amino acid kinase family CCY86_RS00210 PF04542 Sigma-70 region 2 CCY86_RS00210 PF08281 Sigma-70, region 4 CCY86_RS00240 PF00072 Response regulator receiver domain CCY86_RS00265 PF02195 ParB-like nuclease domain CCY86_RS00285 PF01355 High potential iron-sulfur protein CCY86_RS00290 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS00290 PF00072 Response regulator receiver domain CCY86_RS00295 PF03401 Tripartite tricarboxylate transporter family receptor CCY86_RS00300 PF13609 Gram-negative porin CCY86_RS00310 PF07687 Peptidase dimerisation domain CCY86_RS00310 PF01546 Peptidase family M20/M25/M40 CCY86_RS00370 PF01062 Bestrophin, RFP-TM, chloride channel CCY86_RS00375 PF02203 Tar ligand binding domain homologue CCY86_RS00375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS00375 PF00672 HAMP domain CCY86_RS00385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS00395 PF00005 ABC transporter CCY86_RS00400 PF01266 FAD dependent oxidoreductase CCY86_RS00415 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS00415 PF00072 Response regulator receiver domain CCY86_RS00420 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS00420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS00420 PF08521 Two-component sensor kinase N-terminal CCY86_RS00440 PF07690 Major Facilitator Superfamily CCY86_RS00455 PF00042 Globin CCY86_RS00455 PF00970 Oxidoreductase FAD-binding domain CCY86_RS00455 PF00175 Oxidoreductase NAD-binding domain CCY86_RS00460 PF02082 Transcriptional regulator CCY86_RS00465 PF02384 N-6 DNA Methylase CCY86_RS00465 PF12161 HsdM N-terminal domain CCY86_RS00475 PF08463 EcoEI R protein C-terminal CCY86_RS00475 PF00271 Helicase conserved C-terminal domain CCY86_RS00475 PF04851 Type III restriction enzyme, res subunit CCY86_RS00475 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CCY86_RS00480 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS00485 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS00485 PF00072 Response regulator receiver domain CCY86_RS00505 PF00857 Isochorismatase family CCY86_RS00510 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS00510 PF00072 Response regulator receiver domain CCY86_RS00515 PF00563 EAL domain CCY86_RS00515 PF05231 MASE1 CCY86_RS00520 PF03180 NLPA lipoprotein CCY86_RS00525 PF13492 GAF domain CCY86_RS00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS00525 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS00525 PF02702 Osmosensitive K+ channel His kinase sensor domain CCY86_RS00525 PF13493 Domain of unknown function (DUF4118) CCY86_RS00530 PF02669 K+-transporting ATPase, c chain CCY86_RS00540 PF03814 Potassium-transporting ATPase A subunit CCY86_RS00555 PF01048 Phosphorylase superfamily CCY86_RS00570 PF00005 ABC transporter CCY86_RS00580 PF00708 Acylphosphatase CCY86_RS00590 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CCY86_RS00595 PF02515 CoA-transferase family III CCY86_RS00600 PF03776 Septum formation topological specificity factor MinE CCY86_RS00605 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCY86_RS00610 PF03775 Septum formation inhibitor MinC, C-terminal domain CCY86_RS00610 PF05209 Septum formation inhibitor MinC, N-terminal domain CCY86_RS00615 PF02872 5'-nucleotidase, C-terminal domain CCY86_RS00615 PF00149 Calcineurin-like phosphoesterase CCY86_RS00625 PF02558 Ketopantoate reductase PanE/ApbA CCY86_RS00625 PF08546 Ketopantoate reductase PanE/ApbA C terminal CCY86_RS00635 PF00216 Bacterial DNA-binding protein CCY86_RS00645 PF08521 Two-component sensor kinase N-terminal CCY86_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS00645 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS00650 PF00072 Response regulator receiver domain CCY86_RS00650 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS00660 PF01329 Pterin 4 alpha carbinolamine dehydratase CCY86_RS00665 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CCY86_RS00670 PF01037 Lrp/AsnC ligand binding domain CCY86_RS00675 PF07947 YhhN family CCY86_RS00680 PF02423 Ornithine cyclodeaminase/mu-crystallin family CCY86_RS00685 PF03922 OmpW family CCY86_RS00695 PF00403 Heavy-metal-associated domain CCY86_RS00700 PF00376 MerR family regulatory protein CCY86_RS00700 PF09278 MerR, DNA binding CCY86_RS00705 PF12147 Putative methyltransferase CCY86_RS00705 PF12146 Serine aminopeptidase, S33 CCY86_RS00710 PF00732 GMC oxidoreductase CCY86_RS00710 PF05199 GMC oxidoreductase CCY86_RS00715 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS00715 PF00005 ABC transporter CCY86_RS00720 PF00005 ABC transporter CCY86_RS00730 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS00750 PF01925 Sulfite exporter TauE/SafE CCY86_RS00780 PF03466 LysR substrate binding domain CCY86_RS00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS00785 PF12843 Putative quorum-sensing-regulated virulence factor CCY86_RS00790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS00790 PF03466 LysR substrate binding domain CCY86_RS00805 PF13932 GidA associated domain CCY86_RS00805 PF01134 Glucose inhibited division protein A CCY86_RS00810 PF02527 rRNA small subunit methyltransferase G CCY86_RS00815 PF13614 AAA domain CCY86_RS00820 PF02195 ParB-like nuclease domain CCY86_RS00820 PF17762 HTH domain found in ParB protein CCY86_RS00830 PF00119 ATP synthase A chain CCY86_RS00835 PF00137 ATP synthase subunit C CCY86_RS00840 PF00430 ATP synthase B/B' CF(0) CCY86_RS00845 PF00213 ATP synthase delta (OSCP) subunit CCY86_RS00850 PF00306 ATP synthase alpha/beta chain, C terminal domain CCY86_RS00850 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCY86_RS00850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCY86_RS00855 PF00231 ATP synthase CCY86_RS00860 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCY86_RS00860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCY86_RS00865 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CCY86_RS00865 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CCY86_RS00880 PF13380 CoA binding domain CCY86_RS00885 PF07859 alpha/beta hydrolase fold CCY86_RS00895 PF12849 PBP superfamily domain CCY86_RS00900 PF00043 Glutathione S-transferase, C-terminal domain CCY86_RS00900 PF02798 Glutathione S-transferase, N-terminal domain CCY86_RS00915 PF02743 Cache domain CCY86_RS00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS00915 PF00672 HAMP domain CCY86_RS00935 PF01208 Uroporphyrinogen decarboxylase (URO-D) CCY86_RS00940 PF17764 3′ DNA-binding domain (3′BD) CCY86_RS00940 PF00271 Helicase conserved C-terminal domain CCY86_RS00940 PF00270 DEAD/DEAH box helicase CCY86_RS00940 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CCY86_RS00940 PF18074 Primosomal protein N C-terminal domain CCY86_RS00945 PF01619 Proline dehydrogenase CCY86_RS00945 PF00171 Aldehyde dehydrogenase family CCY86_RS00945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CCY86_RS00945 PF14850 DNA-binding domain of Proline dehydrogenase CCY86_RS00950 PF13458 Periplasmic binding protein CCY86_RS00960 PF04107 Glutamate-cysteine ligase family 2(GCS2) CCY86_RS00965 PF03169 OPT oligopeptide transporter protein CCY86_RS00975 PF05114 Protein of unknown function (DUF692) CCY86_RS00985 PF03315 Serine dehydratase beta chain CCY86_RS00985 PF03313 Serine dehydratase alpha chain CCY86_RS00990 PF02347 Glycine cleavage system P-protein CCY86_RS00995 PF01597 Glycine cleavage H-protein CCY86_RS01000 PF08669 Glycine cleavage T-protein C-terminal barrel domain CCY86_RS01000 PF01571 Aminomethyltransferase folate-binding domain CCY86_RS01020 PF00580 UvrD/REP helicase N-terminal domain CCY86_RS01020 PF13361 UvrD-like helicase C-terminal domain CCY86_RS01040 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS01040 PF03472 Autoinducer binding domain CCY86_RS01045 PF00765 Autoinducer synthase CCY86_RS01055 PF04055 Radical SAM superfamily CCY86_RS01055 PF06969 HemN C-terminal domain CCY86_RS01060 PF02887 Pyruvate kinase, alpha/beta domain CCY86_RS01060 PF00224 Pyruvate kinase, barrel domain CCY86_RS01065 PF05161 MOFRL family CCY86_RS01065 PF13660 Domain of unknown function (DUF4147) CCY86_RS01070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCY86_RS01070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCY86_RS01075 PF01261 Xylose isomerase-like TIM barrel CCY86_RS01080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCY86_RS01080 PF00205 Thiamine pyrophosphate enzyme, central domain CCY86_RS01080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCY86_RS01085 PF03466 LysR substrate binding domain CCY86_RS01085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS01100 PF01205 Uncharacterized protein family UPF0029 CCY86_RS01100 PF09186 Domain of unknown function (DUF1949) CCY86_RS01110 PF00375 Sodium:dicarboxylate symporter family CCY86_RS01115 PF03561 Allantoicase repeat CCY86_RS01120 PF04115 Ureidoglycolate lyase CCY86_RS01125 PF07687 Peptidase dimerisation domain CCY86_RS01125 PF01546 Peptidase family M20/M25/M40 CCY86_RS01135 PF03960 ArsC family CCY86_RS01150 PF00753 Metallo-beta-lactamase superfamily CCY86_RS01155 PF05036 Sporulation related domain CCY86_RS01155 PF03330 Lytic transglycolase CCY86_RS01160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS01165 PF02021 Uncharacterised protein family UPF0102 CCY86_RS01180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS01180 PF10518 TAT (twin-arginine translocation) pathway signal sequence CCY86_RS01180 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding CCY86_RS01185 PF00892 EamA-like transporter family CCY86_RS01220 PF08534 Redoxin CCY86_RS01225 PF02872 5'-nucleotidase, C-terminal domain CCY86_RS01225 PF00149 Calcineurin-like phosphoesterase CCY86_RS01245 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS01245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCY86_RS01250 PF05175 Methyltransferase small domain CCY86_RS01255 PF17200 Single Cache domain 2 CCY86_RS01255 PF07730 Histidine kinase CCY86_RS01260 PF00072 Response regulator receiver domain CCY86_RS01260 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS01270 PF13181 Tetratricopeptide repeat CCY86_RS01380 PF03466 LysR substrate binding domain CCY86_RS01380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS01415 PF00668 Condensation domain CCY86_RS01415 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS01415 PF00975 Thioesterase domain CCY86_RS01415 PF00501 AMP-binding enzyme CCY86_RS01415 PF00550 Phosphopantetheine attachment site CCY86_RS01430 PF00975 Thioesterase domain CCY86_RS01430 PF00501 AMP-binding enzyme CCY86_RS01430 PF00550 Phosphopantetheine attachment site CCY86_RS01430 PF00668 Condensation domain CCY86_RS01430 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS01435 PF03621 MbtH-like protein CCY86_RS01440 PF01554 MatE CCY86_RS01450 PF00150 Cellulase (glycosyl hydrolase family 5) CCY86_RS01480 PF01638 HxlR-like helix-turn-helix CCY86_RS01495 PF00106 short chain dehydrogenase CCY86_RS01500 PF00266 Aminotransferase class-V CCY86_RS01510 PF03301 Tryptophan 2,3-dioxygenase CCY86_RS01545 PF01381 Helix-turn-helix CCY86_RS01570 PF01590 GAF domain CCY86_RS01570 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS01570 PF00360 Phytochrome region CCY86_RS01570 PF00563 EAL domain CCY86_RS01575 PF01569 PAP2 superfamily CCY86_RS01585 PF13180 PDZ domain CCY86_RS01595 PF00106 short chain dehydrogenase CCY86_RS01605 PF00672 HAMP domain CCY86_RS01605 PF02203 Tar ligand binding domain homologue CCY86_RS01605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS01630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCY86_RS01630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS01635 PF00107 Zinc-binding dehydrogenase CCY86_RS01635 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS01640 PF00158 Sigma-54 interaction domain CCY86_RS01640 PF02954 Bacterial regulatory protein, Fis family CCY86_RS01640 PF01590 GAF domain CCY86_RS01645 PF00171 Aldehyde dehydrogenase family CCY86_RS01650 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CCY86_RS01655 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CCY86_RS01660 PF00929 Exonuclease CCY86_RS01660 PF08411 Exonuclease C-terminal CCY86_RS01675 PF00155 Aminotransferase class I and II CCY86_RS01675 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS01695 PF00482 Type II secretion system (T2SS), protein F CCY86_RS01705 PF00437 Type II/IV secretion system protein CCY86_RS01710 PF03958 Bacterial type II/III secretion system short domain CCY86_RS01710 PF00263 Bacterial type II and III secretion system protein CCY86_RS01735 PF11612 Type II secretion system (T2SS), protein J CCY86_RS01735 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS01740 PF02501 Type II secretion system (T2SS), protein I CCY86_RS01740 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS01745 PF12019 Type II transport protein GspH CCY86_RS01745 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS01750 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS01750 PF08334 Type II secretion system (T2SS), protein G CCY86_RS01765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCY86_RS01770 PF01037 Lrp/AsnC ligand binding domain CCY86_RS01785 PF00082 Subtilase family CCY86_RS01785 PF12951 Passenger-associated-transport-repeat CCY86_RS01785 PF03797 Autotransporter beta-domain CCY86_RS01805 PF02525 Flavodoxin-like fold CCY86_RS01810 PF00999 Sodium/hydrogen exchanger family CCY86_RS01810 PF02254 TrkA-N domain CCY86_RS01875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCY86_RS01895 PF13411 MerR HTH family regulatory protein CCY86_RS01905 PF12697 Alpha/beta hydrolase family CCY86_RS01910 PF00106 short chain dehydrogenase CCY86_RS01915 PF00743 Flavin-binding monooxygenase-like CCY86_RS01920 PF00072 Response regulator receiver domain CCY86_RS01920 PF09456 RcsC Alpha-Beta-Loop (ABL) CCY86_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS01920 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS01925 PF00072 Response regulator receiver domain CCY86_RS01925 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS01930 PF16916 Dimerisation domain of Zinc Transporter CCY86_RS01930 PF01545 Cation efflux family CCY86_RS01965 PF07690 Major Facilitator Superfamily CCY86_RS01970 PF00924 Mechanosensitive ion channel CCY86_RS01990 PF00072 Response regulator receiver domain CCY86_RS01990 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS01995 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS01995 PF00672 HAMP domain CCY86_RS01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS02010 PF07690 Major Facilitator Superfamily CCY86_RS02015 PF07690 Major Facilitator Superfamily CCY86_RS02025 PF04349 Periplasmic glucan biosynthesis protein, MdoG CCY86_RS02050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CCY86_RS02050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CCY86_RS02065 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS02070 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS02075 PF00005 ABC transporter CCY86_RS02075 PF08402 TOBE domain CCY86_RS02080 PF00005 ABC transporter CCY86_RS02080 PF17912 MalK OB fold domain CCY86_RS02085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CCY86_RS02085 PF01266 FAD dependent oxidoreductase CCY86_RS02090 PF08220 DeoR-like helix-turn-helix domain CCY86_RS02090 PF00455 DeoR C terminal sensor domain CCY86_RS02145 PF03143 Elongation factor Tu C-terminal domain CCY86_RS02145 PF00009 Elongation factor Tu GTP binding domain CCY86_RS02145 PF03144 Elongation factor Tu domain 2 CCY86_RS02160 PF02357 Transcription termination factor nusG CCY86_RS02160 PF00467 KOW motif CCY86_RS02165 PF03946 Ribosomal protein L11, N-terminal domain CCY86_RS02165 PF00298 Ribosomal protein L11, RNA binding domain CCY86_RS02170 PF00687 Ribosomal protein L1p/L10e family CCY86_RS02175 PF00466 Ribosomal protein L10 CCY86_RS02180 PF16320 Ribosomal protein L7/L12 dimerisation domain CCY86_RS02180 PF00542 Ribosomal protein L7/L12 C-terminal domain CCY86_RS02185 PF04560 RNA polymerase Rpb2, domain 7 CCY86_RS02185 PF10385 RNA polymerase beta subunit external 1 domain CCY86_RS02185 PF04565 RNA polymerase Rpb2, domain 3 CCY86_RS02185 PF04561 RNA polymerase Rpb2, domain 2 CCY86_RS02185 PF04563 RNA polymerase beta subunit CCY86_RS02185 PF00562 RNA polymerase Rpb2, domain 6 CCY86_RS02190 PF04997 RNA polymerase Rpb1, domain 1 CCY86_RS02190 PF00623 RNA polymerase Rpb1, domain 2 CCY86_RS02190 PF04998 RNA polymerase Rpb1, domain 5 CCY86_RS02190 PF04983 RNA polymerase Rpb1, domain 3 CCY86_RS02190 PF05000 RNA polymerase Rpb1, domain 4 CCY86_RS02195 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CCY86_RS02200 PF06672 Protein of unknown function (DUF1175) CCY86_RS02205 PF07703 Alpha-2-macroglobulin bait region domain CCY86_RS02205 PF01835 MG2 domain CCY86_RS02205 PF00207 Alpha-2-macroglobulin family CCY86_RS02210 PF08486 Stage II sporulation protein CCY86_RS02210 PF10062 Predicted secreted protein (DUF2300) CCY86_RS02215 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CCY86_RS02220 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CCY86_RS02230 PF16124 RecQ zinc-binding CCY86_RS02230 PF09382 RQC domain CCY86_RS02230 PF00570 HRDC domain CCY86_RS02230 PF00271 Helicase conserved C-terminal domain CCY86_RS02230 PF00270 DEAD/DEAH box helicase CCY86_RS02235 PF00164 Ribosomal protein S12/S23 CCY86_RS02240 PF00177 Ribosomal protein S7p/S5e CCY86_RS02245 PF00009 Elongation factor Tu GTP binding domain CCY86_RS02245 PF00679 Elongation factor G C-terminus CCY86_RS02245 PF14492 Elongation Factor G, domain II CCY86_RS02245 PF03144 Elongation factor Tu domain 2 CCY86_RS02245 PF03764 Elongation factor G, domain IV CCY86_RS02250 PF03144 Elongation factor Tu domain 2 CCY86_RS02250 PF00009 Elongation factor Tu GTP binding domain CCY86_RS02250 PF03143 Elongation factor Tu C-terminal domain CCY86_RS02255 PF00338 Ribosomal protein S10p/S20e CCY86_RS02260 PF00297 Ribosomal protein L3 CCY86_RS02265 PF00573 Ribosomal protein L4/L1 family CCY86_RS02270 PF00276 Ribosomal protein L23 CCY86_RS02275 PF03947 Ribosomal Proteins L2, C-terminal domain CCY86_RS02275 PF00181 Ribosomal Proteins L2, RNA binding domain CCY86_RS02280 PF00203 Ribosomal protein S19 CCY86_RS02285 PF00237 Ribosomal protein L22p/L17e CCY86_RS02290 PF00189 Ribosomal protein S3, C-terminal domain CCY86_RS02290 PF07650 KH domain CCY86_RS02295 PF00252 Ribosomal protein L16p/L10e CCY86_RS02300 PF00831 Ribosomal L29 protein CCY86_RS02305 PF00366 Ribosomal protein S17 CCY86_RS02310 PF00238 Ribosomal protein L14p/L23e CCY86_RS02315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CCY86_RS02320 PF00673 ribosomal L5P family C-terminus CCY86_RS02320 PF00281 Ribosomal protein L5 CCY86_RS02325 PF00253 Ribosomal protein S14p/S29e CCY86_RS02330 PF00410 Ribosomal protein S8 CCY86_RS02335 PF00347 Ribosomal protein L6 CCY86_RS02340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CCY86_RS02345 PF03719 Ribosomal protein S5, C-terminal domain CCY86_RS02345 PF00333 Ribosomal protein S5, N-terminal domain CCY86_RS02350 PF00327 Ribosomal protein L30p/L7e CCY86_RS02355 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CCY86_RS02360 PF00344 SecY translocase CCY86_RS02365 PF01176 Translation initiation factor 1A / IF-1 CCY86_RS02370 PF00444 Ribosomal protein L36 CCY86_RS02375 PF00416 Ribosomal protein S13/S18 CCY86_RS02380 PF00411 Ribosomal protein S11 CCY86_RS02385 PF00163 Ribosomal protein S4/S9 N-terminal domain CCY86_RS02385 PF01479 S4 domain CCY86_RS02390 PF01000 RNA polymerase Rpb3/RpoA insert domain CCY86_RS02390 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CCY86_RS02390 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CCY86_RS02395 PF01196 Ribosomal protein L17 CCY86_RS02405 PF02683 Cytochrome C biogenesis protein transmembrane region CCY86_RS02405 PF11412 Disulphide bond corrector protein DsbC CCY86_RS02410 PF00490 Delta-aminolevulinic acid dehydratase CCY86_RS02415 PF01926 50S ribosome-binding GTPase CCY86_RS02420 PF00034 Cytochrome c CCY86_RS02425 PF05140 ResB-like family CCY86_RS02430 PF01578 Cytochrome C assembly protein CCY86_RS02440 PF08281 Sigma-70, region 4 CCY86_RS02440 PF04542 Sigma-70 region 2 CCY86_RS02450 PF00174 Oxidoreductase molybdopterin binding domain CCY86_RS02455 PF01794 Ferric reductase like transmembrane component CCY86_RS02460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCY86_RS02460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CCY86_RS02470 PF01491 Frataxin-like domain CCY86_RS02475 PF17092 Penicillin-binding protein OB-like domain CCY86_RS02475 PF00912 Transglycosylase CCY86_RS02475 PF00905 Penicillin binding protein transpeptidase domain CCY86_RS02480 PF11104 Type IV pilus assembly protein PilM; CCY86_RS02485 PF05137 Fimbrial assembly protein (PilN) CCY86_RS02500 PF07660 Secretin and TonB N terminus short domain CCY86_RS02500 PF03958 Bacterial type II/III secretion system short domain CCY86_RS02500 PF00263 Bacterial type II and III secretion system protein CCY86_RS02500 PF11741 AMIN domain CCY86_RS02505 PF01202 Shikimate kinase CCY86_RS02510 PF01761 3-dehydroquinate synthase CCY86_RS02515 PF01966 HD domain CCY86_RS02515 PF13286 Phosphohydrolase-associated domain CCY86_RS02520 PF03922 OmpW family CCY86_RS02530 PF04898 Glutamate synthase central domain CCY86_RS02530 PF01493 GXGXG motif CCY86_RS02530 PF00310 Glutamine amidotransferases class-II CCY86_RS02530 PF01645 Conserved region in glutamate synthase CCY86_RS02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS02535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCY86_RS02545 PF00005 ABC transporter CCY86_RS02550 PF02405 Permease MlaE CCY86_RS02555 PF02470 MlaD protein CCY86_RS02560 PF04333 MlaA lipoprotein CCY86_RS02575 PF00005 ABC transporter CCY86_RS02580 PF01061 ABC-2 type transporter CCY86_RS02590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCY86_RS02595 PF01634 ATP phosphoribosyltransferase CCY86_RS02600 PF00815 Histidinol dehydrogenase CCY86_RS02605 PF00155 Aminotransferase class I and II CCY86_RS02610 PF00475 Imidazoleglycerol-phosphate dehydratase CCY86_RS02615 PF00117 Glutamine amidotransferase class-I CCY86_RS02620 PF00977 Histidine biosynthesis protein CCY86_RS02625 PF00977 Histidine biosynthesis protein CCY86_RS02630 PF01502 Phosphoribosyl-AMP cyclohydrolase CCY86_RS02635 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CCY86_RS02645 PF02416 mttA/Hcf106 family CCY86_RS02650 PF02416 mttA/Hcf106 family CCY86_RS02655 PF00902 Sec-independent protein translocase protein (TatC) CCY86_RS02660 PF00005 ABC transporter CCY86_RS02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS02675 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS02680 PF00072 Response regulator receiver domain CCY86_RS02680 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS02690 PF13609 Gram-negative porin CCY86_RS02695 PF13180 PDZ domain CCY86_RS02695 PF17820 PDZ domain CCY86_RS02700 PF01784 NIF3 (NGG1p interacting factor 3) CCY86_RS02705 PF01741 Large-conductance mechanosensitive channel, MscL CCY86_RS02710 PF00355 Rieske [2Fe-2S] domain CCY86_RS02710 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CCY86_RS02715 PF00032 Cytochrome b(C-terminal)/b6/petD CCY86_RS02715 PF00033 Cytochrome b/b6/petB CCY86_RS02720 PF02167 Cytochrome C1 family CCY86_RS02725 PF02798 Glutathione S-transferase, N-terminal domain CCY86_RS02725 PF00043 Glutathione S-transferase, C-terminal domain CCY86_RS02730 PF04386 Stringent starvation protein B CCY86_RS02740 PF00072 Response regulator receiver domain CCY86_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS02755 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS02755 PF00593 TonB dependent receptor CCY86_RS02760 PF16220 Domain of unknown function (DUF4880) CCY86_RS02760 PF04773 FecR protein CCY86_RS02770 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCY86_RS02770 PF06481 COX Aromatic Rich Motif CCY86_RS02775 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCY86_RS02780 PF00510 Cytochrome c oxidase subunit III CCY86_RS02785 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CCY86_RS02790 PF00005 ABC transporter CCY86_RS02790 PF12848 ABC transporter CCY86_RS02810 PF00535 Glycosyl transferase family 2 CCY86_RS02815 PF04349 Periplasmic glucan biosynthesis protein, MdoG CCY86_RS02825 PF02441 Flavoprotein CCY86_RS02830 PF00462 Glutaredoxin CCY86_RS02835 PF17827 PrmC N-terminal domain CCY86_RS02835 PF05175 Methyltransferase small domain CCY86_RS02845 PF00472 RF-1 domain CCY86_RS02845 PF03462 PCRF domain CCY86_RS02850 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CCY86_RS02850 PF01488 Shikimate / quinate 5-dehydrogenase CCY86_RS02850 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CCY86_RS02860 PF06071 Protein of unknown function (DUF933) CCY86_RS02860 PF01926 50S ribosome-binding GTPase CCY86_RS02870 PF01464 Transglycosylase SLT domain CCY86_RS02885 PF01494 FAD binding domain CCY86_RS02890 PF13098 Thioredoxin-like domain CCY86_RS02890 PF10411 Disulfide bond isomerase protein N-terminus CCY86_RS02895 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS02895 PF00107 Zinc-binding dehydrogenase CCY86_RS02900 PF13180 PDZ domain CCY86_RS02905 PF12805 FUSC-like inner membrane protein yccS CCY86_RS02910 PF03167 Uracil DNA glycosylase superfamily CCY86_RS02920 PF00218 Indole-3-glycerol phosphate synthase CCY86_RS02925 PF00591 Glycosyl transferase family, a/b domain CCY86_RS02925 PF02885 Glycosyl transferase family, helical bundle domain CCY86_RS02935 PF00117 Glutamine amidotransferase class-I CCY86_RS02940 PF04715 Anthranilate synthase component I, N terminal region CCY86_RS02940 PF00425 chorismate binding enzyme CCY86_RS02945 PF13419 Haloacid dehalogenase-like hydrolase CCY86_RS02950 PF00834 Ribulose-phosphate 3 epimerase family CCY86_RS02955 PF04379 ApaG domain CCY86_RS02970 PF14535 AMP-binding enzyme C-terminal domain CCY86_RS02970 PF00501 AMP-binding enzyme CCY86_RS02975 PF03061 Thioesterase superfamily CCY86_RS02980 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS03015 PF07687 Peptidase dimerisation domain CCY86_RS03015 PF01546 Peptidase family M20/M25/M40 CCY86_RS03020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS03025 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS03030 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS03030 PF12911 N-terminal TM domain of oligopeptide transport permease C CCY86_RS03035 PF00005 ABC transporter CCY86_RS03035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS03040 PF00005 ABC transporter CCY86_RS03040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS03045 PF07687 Peptidase dimerisation domain CCY86_RS03045 PF01546 Peptidase family M20/M25/M40 CCY86_RS03055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CCY86_RS03060 PF00294 pfkB family carbohydrate kinase CCY86_RS03065 PF00381 PTS HPr component phosphorylation site CCY86_RS03065 PF00391 PEP-utilising enzyme, mobile domain CCY86_RS03065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCY86_RS03065 PF05524 PEP-utilising enzyme, N-terminal CCY86_RS03065 PF02896 PEP-utilising enzyme, TIM barrel domain CCY86_RS03070 PF00356 Bacterial regulatory proteins, lacI family CCY86_RS03075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CCY86_RS03075 PF00384 Molybdopterin oxidoreductase CCY86_RS03075 PF01568 Molydopterin dinucleotide binding domain CCY86_RS03085 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS03085 PF00501 AMP-binding enzyme CCY86_RS03090 PF00083 Sugar (and other) transporter CCY86_RS03090 PF07690 Major Facilitator Superfamily CCY86_RS03100 PF03232 Ubiquinone biosynthesis protein COQ7 CCY86_RS03105 PF02381 MraZ protein, putative antitoxin-like CCY86_RS03110 PF01795 MraW methylase family CCY86_RS03115 PF04999 Cell division protein FtsL CCY86_RS03120 PF03717 Penicillin-binding Protein dimerisation domain CCY86_RS03120 PF00905 Penicillin binding protein transpeptidase domain CCY86_RS03125 PF02875 Mur ligase family, glutamate ligase domain CCY86_RS03125 PF08245 Mur ligase middle domain CCY86_RS03130 PF02875 Mur ligase family, glutamate ligase domain CCY86_RS03130 PF01225 Mur ligase family, catalytic domain CCY86_RS03130 PF08245 Mur ligase middle domain CCY86_RS03135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CCY86_RS03135 PF00953 Glycosyl transferase family 4 CCY86_RS03140 PF02875 Mur ligase family, glutamate ligase domain CCY86_RS03140 PF08245 Mur ligase middle domain CCY86_RS03145 PF01098 Cell cycle protein CCY86_RS03150 PF04101 Glycosyltransferase family 28 C-terminal domain CCY86_RS03150 PF03033 Glycosyltransferase family 28 N-terminal domain CCY86_RS03155 PF08245 Mur ligase middle domain CCY86_RS03155 PF02875 Mur ligase family, glutamate ligase domain CCY86_RS03155 PF01225 Mur ligase family, catalytic domain CCY86_RS03160 PF07478 D-ala D-ala ligase C-terminus CCY86_RS03160 PF01820 D-ala D-ala ligase N-terminus CCY86_RS03165 PF03799 Cell division protein FtsQ CCY86_RS03165 PF08478 POTRA domain, FtsQ-type CCY86_RS03170 PF02491 SHS2 domain inserted in FTSA CCY86_RS03175 PF00091 Tubulin/FtsZ family, GTPase domain CCY86_RS03175 PF12327 FtsZ family, C-terminal domain CCY86_RS03180 PF08534 Redoxin CCY86_RS03185 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CCY86_RS03195 PF01476 LysM domain CCY86_RS03195 PF08525 Opacity-associated protein A N-terminal motif CCY86_RS03195 PF01551 Peptidase family M23 CCY86_RS03200 PF07517 SecA DEAD-like domain CCY86_RS03200 PF02810 SEC-C motif CCY86_RS03200 PF01043 SecA preprotein cross-linking domain CCY86_RS03200 PF07516 SecA Wing and Scaffold domain CCY86_RS03205 PF01960 ArgJ family CCY86_RS03215 PF00293 NUDIX domain CCY86_RS03220 PF03884 DNA gyrase inhibitor YacG CCY86_RS03225 PF07072 Cell division protein CCY86_RS03230 PF01121 Dephospho-CoA kinase CCY86_RS03235 PF01478 Type IV leader peptidase family CCY86_RS03235 PF06750 Bacterial Peptidase A24 N-terminal domain CCY86_RS03240 PF00482 Type II secretion system (T2SS), protein F CCY86_RS03245 PF00437 Type II/IV secretion system protein CCY86_RS03245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CCY86_RS03250 PF00571 CBS domain CCY86_RS03250 PF01595 Cyclin M transmembrane N-terminal domain CCY86_RS03250 PF03471 Transporter associated domain CCY86_RS03260 PF00348 Polyprenyl synthetase CCY86_RS03265 PF00829 Ribosomal prokaryotic L21 protein CCY86_RS03270 PF01016 Ribosomal L27 protein CCY86_RS03275 PF01926 50S ribosome-binding GTPase CCY86_RS03275 PF01018 GTP1/OBG CCY86_RS03280 PF00696 Amino acid kinase family CCY86_RS03280 PF01472 PUA domain CCY86_RS03290 PF00293 NUDIX domain CCY86_RS03295 PF04073 Aminoacyl-tRNA editing domain CCY86_RS03295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCY86_RS03295 PF03129 Anticodon binding domain CCY86_RS03300 PF01464 Transglycosylase SLT domain CCY86_RS03310 PF01914 MarC family integral membrane protein CCY86_RS03315 PF00156 Phosphoribosyl transferase domain CCY86_RS03320 PF02978 Signal peptide binding domain CCY86_RS03320 PF02881 SRP54-type protein, helical bundle domain CCY86_RS03320 PF00448 SRP54-type protein, GTPase domain CCY86_RS03325 PF01578 Cytochrome C assembly protein CCY86_RS03335 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS03340 PF00072 Response regulator receiver domain CCY86_RS03340 PF00158 Sigma-54 interaction domain CCY86_RS03340 PF02954 Bacterial regulatory protein, Fis family CCY86_RS03345 PF01510 N-acetylmuramoyl-L-alanine amidase CCY86_RS03350 PF02867 Ribonucleotide reductase, barrel domain CCY86_RS03350 PF00317 Ribonucleotide reductase, all-alpha domain CCY86_RS03350 PF03477 ATP cone domain CCY86_RS03355 PF00268 Ribonucleotide reductase, small chain CCY86_RS03365 PF00892 EamA-like transporter family CCY86_RS03370 PF01037 Lrp/AsnC ligand binding domain CCY86_RS03380 PF02203 Tar ligand binding domain homologue CCY86_RS03380 PF00672 HAMP domain CCY86_RS03380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS03420 PF00294 pfkB family carbohydrate kinase CCY86_RS03425 PF08534 Redoxin CCY86_RS03445 PF00364 Biotin-requiring enzyme CCY86_RS03450 PF01220 Dehydroquinase class II CCY86_RS03455 PF00085 Thioredoxin CCY86_RS03465 PF01225 Mur ligase family, catalytic domain CCY86_RS03465 PF08245 Mur ligase middle domain CCY86_RS03465 PF02875 Mur ligase family, glutamate ligase domain CCY86_RS03470 PF05728 Uncharacterised protein family (UPF0227) CCY86_RS03475 PF04345 Chorismate lyase CCY86_RS03480 PF00773 RNB domain CCY86_RS03490 PF01488 Shikimate / quinate 5-dehydrogenase CCY86_RS03490 PF08501 Shikimate dehydrogenase substrate binding domain CCY86_RS03490 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CCY86_RS03495 PF00912 Transglycosylase CCY86_RS03505 PF01544 CorA-like Mg2+ transporter protein CCY86_RS03510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CCY86_RS03515 PF01545 Cation efflux family CCY86_RS03520 PF02464 Competence-damaged protein CCY86_RS03520 PF00994 Probable molybdopterin binding domain CCY86_RS03520 PF18146 Damage-inducible protein CinA KH domain CCY86_RS03525 PF04608 Phosphatidylglycerophosphatase A CCY86_RS03530 PF02769 AIR synthase related protein, C-terminal domain CCY86_RS03530 PF00586 AIR synthase related protein, N-terminal domain CCY86_RS03535 PF01515 Phosphate acetyl/butaryl transferase CCY86_RS03535 PF03949 Malic enzyme, NAD binding domain CCY86_RS03535 PF00390 Malic enzyme, N-terminal domain CCY86_RS03555 PF04452 RNA methyltransferase CCY86_RS03565 PF02780 Transketolase, C-terminal domain CCY86_RS03565 PF02779 Transketolase, pyrimidine binding domain CCY86_RS03565 PF00456 Transketolase, thiamine diphosphate binding domain CCY86_RS03570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CCY86_RS03570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CCY86_RS03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS03575 PF03466 LysR substrate binding domain CCY86_RS03580 PF01475 Ferric uptake regulator family CCY86_RS03585 PF04355 SmpA / OmlA family CCY86_RS03590 PF05173 Dihydrodipicolinate reductase, C-terminus CCY86_RS03590 PF01113 Dihydrodipicolinate reductase, N-terminus CCY86_RS03595 PF13603 Leucyl-tRNA synthetase, Domain 2 CCY86_RS03595 PF09334 tRNA synthetases class I (M) CCY86_RS03595 PF08264 Anticodon-binding domain of tRNA CCY86_RS03595 PF00133 tRNA synthetases class I (I, L, M and V) CCY86_RS03605 PF06144 DNA polymerase III, delta subunit CCY86_RS03605 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CCY86_RS03610 PF00171 Aldehyde dehydrogenase family CCY86_RS03615 PF03653 Uncharacterised protein family (UPF0093) CCY86_RS03620 PF01170 Putative RNA methylase family UPF0020 CCY86_RS03620 PF02926 THUMP domain CCY86_RS03625 PF02954 Bacterial regulatory protein, Fis family CCY86_RS03625 PF00072 Response regulator receiver domain CCY86_RS03625 PF00158 Sigma-54 interaction domain CCY86_RS03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS03630 PF00989 PAS fold CCY86_RS03630 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS03635 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS03645 PF00072 Response regulator receiver domain CCY86_RS03650 PF02233 NAD(P) transhydrogenase beta subunit CCY86_RS03655 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CCY86_RS03660 PF02261 Aspartate decarboxylase CCY86_RS03665 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CCY86_RS03665 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CCY86_RS03670 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS03670 PF00593 TonB dependent receptor CCY86_RS03680 PF07690 Major Facilitator Superfamily CCY86_RS03685 PF13533 Biotin-lipoyl like CCY86_RS03695 PF00293 NUDIX domain CCY86_RS03705 PF01645 Conserved region in glutamate synthase CCY86_RS03710 PF00043 Glutathione S-transferase, C-terminal domain CCY86_RS03710 PF13417 Glutathione S-transferase, N-terminal domain CCY86_RS03715 PF08328 Adenylosuccinate lyase C-terminal CCY86_RS03715 PF00206 Lyase CCY86_RS03720 PF01292 Prokaryotic cytochrome b561 CCY86_RS03725 PF04264 YceI-like domain CCY86_RS03730 PF04264 YceI-like domain CCY86_RS03735 PF07549 SecD/SecF GG Motif CCY86_RS03735 PF02355 Protein export membrane protein CCY86_RS03740 PF07549 SecD/SecF GG Motif CCY86_RS03740 PF02355 Protein export membrane protein CCY86_RS03740 PF13721 SecD export protein N-terminal TM region CCY86_RS03745 PF02699 Preprotein translocase subunit CCY86_RS03750 PF01702 Queuine tRNA-ribosyltransferase CCY86_RS03755 PF02547 Queuosine biosynthesis protein CCY86_RS03760 PF17191 RecG wedge domain CCY86_RS03760 PF00271 Helicase conserved C-terminal domain CCY86_RS03760 PF00270 DEAD/DEAH box helicase CCY86_RS03775 PF01168 Alanine racemase, N-terminal domain CCY86_RS03775 PF14031 Putative serine dehydratase domain CCY86_RS03780 PF03466 LysR substrate binding domain CCY86_RS03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS03790 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS03795 PF07687 Peptidase dimerisation domain CCY86_RS03795 PF01546 Peptidase family M20/M25/M40 CCY86_RS03800 PF01037 Lrp/AsnC ligand binding domain CCY86_RS03805 PF07687 Peptidase dimerisation domain CCY86_RS03805 PF01546 Peptidase family M20/M25/M40 CCY86_RS03815 PF01266 FAD dependent oxidoreductase CCY86_RS03820 PF00083 Sugar (and other) transporter CCY86_RS03825 PF00701 Dihydrodipicolinate synthetase family CCY86_RS03830 PF00171 Aldehyde dehydrogenase family CCY86_RS03835 PF00892 EamA-like transporter family CCY86_RS03840 PF13609 Gram-negative porin CCY86_RS03855 PF03466 LysR substrate binding domain CCY86_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS03865 PF00210 Ferritin-like domain CCY86_RS03870 PF01040 UbiA prenyltransferase family CCY86_RS03880 PF03807 NADP oxidoreductase coenzyme F420-dependent CCY86_RS03880 PF14748 Pyrroline-5-carboxylate reductase dimerisation CCY86_RS03885 PF01168 Alanine racemase, N-terminal domain CCY86_RS03890 PF00437 Type II/IV secretion system protein CCY86_RS03895 PF00437 Type II/IV secretion system protein CCY86_RS03930 PF00255 Glutathione peroxidase CCY86_RS03940 PF07883 Cupin domain CCY86_RS03950 PF04172 LrgB-like family CCY86_RS03955 PF03788 LrgA family CCY86_RS03960 PF13183 4Fe-4S dicluster domain CCY86_RS03960 PF02754 Cysteine-rich domain CCY86_RS03965 PF01565 FAD binding domain CCY86_RS03970 PF01565 FAD binding domain CCY86_RS03970 PF02913 FAD linked oxidases, C-terminal domain CCY86_RS03980 PF01565 FAD binding domain CCY86_RS03980 PF02913 FAD linked oxidases, C-terminal domain CCY86_RS03985 PF01923 Cobalamin adenosyltransferase CCY86_RS03990 PF00924 Mechanosensitive ion channel CCY86_RS03990 PF05552 Conserved TM helix CCY86_RS04000 PF00793 DAHP synthetase I family CCY86_RS04005 PF01523 Putative modulator of DNA gyrase CCY86_RS04010 PF00795 Carbon-nitrogen hydrolase CCY86_RS04020 PF08335 GlnD PII-uridylyltransferase CCY86_RS04020 PF03710 Glutamate-ammonia ligase adenylyltransferase CCY86_RS04030 PF00082 Subtilase family CCY86_RS04030 PF04151 Bacterial pre-peptidase C-terminal domain CCY86_RS04035 PF04151 Bacterial pre-peptidase C-terminal domain CCY86_RS04035 PF00082 Subtilase family CCY86_RS04045 PF02463 RecF/RecN/SMC N terminal domain CCY86_RS04050 PF01513 ATP-NAD kinase CCY86_RS04055 PF01628 HrcA protein C terminal domain CCY86_RS04060 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS04060 PF07702 UTRA domain CCY86_RS04065 PF01175 Urocanase Rossmann-like domain CCY86_RS04065 PF17392 Urocanase C-terminal domain CCY86_RS04065 PF17391 Urocanase N-terminal domain CCY86_RS04070 PF00221 Aromatic amino acid lyase CCY86_RS04075 PF00491 Arginase family CCY86_RS04080 PF01979 Amidohydrolase family CCY86_RS04085 PF00762 Ferrochelatase CCY86_RS04090 PF01479 S4 domain CCY86_RS04105 PF01025 GrpE CCY86_RS04120 PF14760 Rnk N-terminus CCY86_RS04120 PF01272 Transcription elongation factor, GreA/GreB, C-term CCY86_RS04125 PF00012 Hsp70 protein CCY86_RS04130 PF00684 DnaJ central domain CCY86_RS04130 PF00226 DnaJ domain CCY86_RS04130 PF01556 DnaJ C terminal domain CCY86_RS04135 PF00425 chorismate binding enzyme CCY86_RS04135 PF04715 Anthranilate synthase component I, N terminal region CCY86_RS04135 PF00117 Glutamine amidotransferase class-I CCY86_RS04140 PF00005 ABC transporter CCY86_RS04145 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS04150 PF02548 Ketopantoate hydroxymethyltransferase CCY86_RS04160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CCY86_RS04165 PF01743 Poly A polymerase head domain CCY86_RS04165 PF12626 Polymerase A arginine-rich C-terminus CCY86_RS04165 PF12627 Probable RNA and SrmB- binding site of polymerase A CCY86_RS04175 PF00308 Bacterial dnaA protein CCY86_RS04180 PF01594 AI-2E family transporter CCY86_RS04185 PF02769 AIR synthase related protein, C-terminal domain CCY86_RS04185 PF00586 AIR synthase related protein, N-terminal domain CCY86_RS04200 PF02805 Metal binding domain of Ada CCY86_RS04200 PF12833 Helix-turn-helix domain CCY86_RS04200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CCY86_RS04200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCY86_RS04210 PF13532 2OG-Fe(II) oxygenase superfamily CCY86_RS04215 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CCY86_RS04220 PF02805 Metal binding domain of Ada CCY86_RS04220 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CCY86_RS04220 PF12833 Helix-turn-helix domain CCY86_RS04220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCY86_RS04235 PF01119 DNA mismatch repair protein, C-terminal domain CCY86_RS04235 PF08676 MutL C terminal dimerisation domain CCY86_RS04240 PF02470 MlaD protein CCY86_RS04255 PF09335 SNARE associated Golgi protein CCY86_RS04260 PF13369 Transglutaminase-like superfamily CCY86_RS04265 PF03023 Lipid II flippase MurJ CCY86_RS04270 PF01649 Ribosomal protein S20 CCY86_RS04280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCY86_RS04280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCY86_RS04285 PF00764 Arginosuccinate synthase CCY86_RS04290 PF06865 Pyrimidine/purine nucleoside phosphorylase CCY86_RS04320 PF00535 Glycosyl transferase family 2 CCY86_RS04350 PF00437 Type II/IV secretion system protein CCY86_RS04365 PF00263 Bacterial type II and III secretion system protein CCY86_RS04365 PF04972 BON domain CCY86_RS04365 PF13629 Pilus formation protein N terminal region CCY86_RS04410 PF00701 Dihydrodipicolinate synthetase family CCY86_RS04415 PF00202 Aminotransferase class-III CCY86_RS04420 PF00301 Rubredoxin CCY86_RS04425 PF00072 Response regulator receiver domain CCY86_RS04430 PF00072 Response regulator receiver domain CCY86_RS04435 PF01584 CheW-like domain CCY86_RS04440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS04440 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CCY86_RS04445 PF00072 Response regulator receiver domain CCY86_RS04445 PF01627 Hpt domain CCY86_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS04445 PF02895 Signal transducing histidine kinase, homodimeric domain CCY86_RS04445 PF01584 CheW-like domain CCY86_RS04445 PF00072 Response regulator receiver domain CCY86_RS04445 PF01627 Hpt domain CCY86_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS04445 PF02895 Signal transducing histidine kinase, homodimeric domain CCY86_RS04445 PF01584 CheW-like domain CCY86_RS04450 PF00875 DNA photolyase CCY86_RS04450 PF03441 FAD binding domain of DNA photolyase CCY86_RS04455 PF00849 RNA pseudouridylate synthase CCY86_RS04455 PF01479 S4 domain CCY86_RS04460 PF02622 Uncharacterized ACR, COG1678 CCY86_RS04465 PF03652 Holliday junction resolvase CCY86_RS04470 PF00156 Phosphoribosyl transferase domain CCY86_RS04475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CCY86_RS04475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CCY86_RS04480 PF01979 Amidohydrolase family CCY86_RS04485 PF01553 Acyltransferase CCY86_RS04490 PF00149 Calcineurin-like phosphoesterase CCY86_RS04495 PF16363 GDP-mannose 4,6 dehydratase CCY86_RS04500 PF04321 RmlD substrate binding domain CCY86_RS04505 PF00483 Nucleotidyl transferase CCY86_RS04510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CCY86_RS04530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CCY86_RS04530 PF00953 Glycosyl transferase family 4 CCY86_RS04540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCY86_RS04540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCY86_RS04540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCY86_RS04540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCY86_RS04545 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCY86_RS04550 PF00534 Glycosyl transferases group 1 CCY86_RS04550 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CCY86_RS04560 PF02321 Outer membrane efflux protein CCY86_RS04565 PF01206 Sulfurtransferase TusA CCY86_RS04565 PF00581 Rhodanese-like domain CCY86_RS04575 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS04575 PF08361 MAATS-type transcriptional repressor, C-terminal region CCY86_RS04585 PF03692 Putative zinc- or iron-chelating domain CCY86_RS04595 PF02673 Bacitracin resistance protein BacA CCY86_RS04600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCY86_RS04605 PF02390 Putative methyltransferase CCY86_RS04635 PF00171 Aldehyde dehydrogenase family CCY86_RS04640 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CCY86_RS04645 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CCY86_RS04645 PF01464 Transglycosylase SLT domain CCY86_RS04650 PF00155 Aminotransferase class I and II CCY86_RS04655 PF01029 NusB family CCY86_RS04660 PF00885 6,7-dimethyl-8-ribityllumazine synthase CCY86_RS04665 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CCY86_RS04665 PF00925 GTP cyclohydrolase II CCY86_RS04670 PF00677 Lumazine binding domain CCY86_RS04675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CCY86_RS04675 PF01872 RibD C-terminal domain CCY86_RS04685 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CCY86_RS04685 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS04690 PF05567 Neisseria PilC beta-propeller domain CCY86_RS04710 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS04710 PF12019 Type II transport protein GspH CCY86_RS04720 PF05567 Neisseria PilC beta-propeller domain CCY86_RS04740 PF03477 ATP cone domain CCY86_RS04745 PF00464 Serine hydroxymethyltransferase CCY86_RS04750 PF00106 short chain dehydrogenase CCY86_RS04755 PF03061 Thioesterase superfamily CCY86_RS04760 PF01618 MotA/TolQ/ExbB proton channel family CCY86_RS04765 PF02472 Biopolymer transport protein ExbD/TolR CCY86_RS04775 PF04052 TolB amino-terminal domain CCY86_RS04775 PF07676 WD40-like Beta Propeller Repeat CCY86_RS04780 PF00691 OmpA family CCY86_RS04785 PF16331 TolA binding protein trimerisation CCY86_RS04785 PF13174 Tetratricopeptide repeat CCY86_RS04790 PF06508 Queuosine biosynthesis protein QueC CCY86_RS04795 PF04143 Sulphur transport CCY86_RS04805 PF00793 DAHP synthetase I family CCY86_RS04825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS04825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS04830 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CCY86_RS04835 PF00293 NUDIX domain CCY86_RS04840 PF03649 Uncharacterised protein family (UPF0014) CCY86_RS04845 PF00005 ABC transporter CCY86_RS04865 PF05957 Bacterial protein of unknown function (DUF883) CCY86_RS04870 PF00578 AhpC/TSA family CCY86_RS04870 PF10417 C-terminal domain of 1-Cys peroxiredoxin CCY86_RS04875 PF00860 Permease family CCY86_RS04880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS04880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS04880 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS04890 PF03301 Tryptophan 2,3-dioxygenase CCY86_RS04895 PF00266 Aminotransferase class-V CCY86_RS04900 PF04199 Putative cyclase CCY86_RS04905 PF01037 Lrp/AsnC ligand binding domain CCY86_RS04915 PF01613 Flavin reductase like domain CCY86_RS04920 PF01625 Peptide methionine sulfoxide reductase CCY86_RS04935 PF01243 Pyridoxamine 5'-phosphate oxidase CCY86_RS04935 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CCY86_RS04940 PF00933 Glycosyl hydrolase family 3 N terminal domain CCY86_RS04950 PF05199 GMC oxidoreductase CCY86_RS04950 PF00732 GMC oxidoreductase CCY86_RS04955 PF00034 Cytochrome c CCY86_RS04955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCY86_RS04960 PF05170 AsmA family CCY86_RS04965 PF00899 ThiF family CCY86_RS04970 PF00141 Peroxidase CCY86_RS04975 PF01814 Hemerythrin HHE cation binding domain CCY86_RS04985 PF00085 Thioredoxin CCY86_RS04990 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS04990 PF00501 AMP-binding enzyme CCY86_RS05000 PF04752 ChaC-like protein CCY86_RS05010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCY86_RS05015 PF07152 YaeQ protein CCY86_RS05045 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCY86_RS05045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CCY86_RS05050 PF01970 Tripartite tricarboxylate transporter TctA family CCY86_RS05055 PF07331 Tripartite tricarboxylate transporter TctB family CCY86_RS05065 PF02515 CoA-transferase family III CCY86_RS05070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCY86_RS05070 PF01411 tRNA synthetases class II (A) CCY86_RS05070 PF02272 DHHA1 domain CCY86_RS05080 PF06250 YhcG PDDEXK nuclease domain CCY86_RS05080 PF17761 DUF1016 N-terminal domain CCY86_RS05095 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS05095 PF00593 TonB dependent receptor CCY86_RS05105 PF01145 SPFH domain / Band 7 family CCY86_RS05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS05115 PF03466 LysR substrate binding domain CCY86_RS05120 PF06779 Uncharacterised MFS-type transporter YbfB CCY86_RS05125 PF00596 Class II Aldolase and Adducin N-terminal domain CCY86_RS05130 PF01361 Tautomerase enzyme CCY86_RS05135 PF01212 Beta-eliminating lyase CCY86_RS05140 PF13344 Haloacid dehalogenase-like hydrolase CCY86_RS05140 PF00293 NUDIX domain CCY86_RS05145 PF01206 Sulfurtransferase TusA CCY86_RS05160 PF01810 LysE type translocator CCY86_RS05175 PF01638 HxlR-like helix-turn-helix CCY86_RS05180 PF02798 Glutathione S-transferase, N-terminal domain CCY86_RS05180 PF00043 Glutathione S-transferase, C-terminal domain CCY86_RS05185 PF03330 Lytic transglycolase CCY86_RS05205 PF06074 Protein of unknown function (DUF935) CCY86_RS05230 PF01464 Transglycosylase SLT domain CCY86_RS05230 PF10145 Phage-related minor tail protein CCY86_RS05230 PF01551 Peptidase family M23 CCY86_RS05290 PF00216 Bacterial DNA-binding protein CCY86_RS05325 PF10123 Mu-like prophage I protein CCY86_RS05330 PF10124 Mu-like prophage major head subunit gpT CCY86_RS05350 PF17482 Phage tail sheath C-terminal domain CCY86_RS05350 PF04984 Phage tail sheath protein subtilisin-like domain CCY86_RS05415 PF02678 Pirin CCY86_RS05415 PF05726 Pirin C-terminal cupin domain CCY86_RS05420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCY86_RS05430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS05430 PF03466 LysR substrate binding domain CCY86_RS05435 PF01022 Bacterial regulatory protein, arsR family CCY86_RS05460 PF13419 Haloacid dehalogenase-like hydrolase CCY86_RS05475 PF00691 OmpA family CCY86_RS05480 PF00521 DNA gyrase/topoisomerase IV, subunit A CCY86_RS05480 PF03989 DNA gyrase C-terminal domain, beta-propeller CCY86_RS05490 PF00266 Aminotransferase class-V CCY86_RS05495 PF00800 Prephenate dehydratase CCY86_RS05495 PF01817 Chorismate mutase type II CCY86_RS05495 PF01842 ACT domain CCY86_RS05500 PF00155 Aminotransferase class I and II CCY86_RS05505 PF01842 ACT domain CCY86_RS05505 PF02153 Prephenate dehydrogenase CCY86_RS05510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CCY86_RS05515 PF02224 Cytidylate kinase CCY86_RS05520 PF00575 S1 RNA binding domain CCY86_RS05525 PF00216 Bacterial DNA-binding protein CCY86_RS05535 PF18073 Rubredoxin metal binding domain CCY86_RS05540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCY86_RS05540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCY86_RS05540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCY86_RS05545 PF00294 pfkB family carbohydrate kinase CCY86_RS05550 PF01370 NAD dependent epimerase/dehydratase family CCY86_RS05560 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS05565 PF13406 Transglycosylase SLT domain CCY86_RS05590 PF01555 DNA methylase CCY86_RS05610 PF01555 DNA methylase CCY86_RS05630 PF10544 T5orf172 domain CCY86_RS05655 PF00589 Phage integrase family CCY86_RS05665 PF02403 Seryl-tRNA synthetase N-terminal domain CCY86_RS05665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCY86_RS05675 PF00239 Resolvase, N terminal domain CCY86_RS05675 PF02796 Helix-turn-helix domain of resolvase CCY86_RS05765 PF02321 Outer membrane efflux protein CCY86_RS05770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS05775 PF00873 AcrB/AcrD/AcrF family CCY86_RS05785 PF01613 Flavin reductase like domain CCY86_RS05790 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS05795 PF00625 Guanylate kinase CCY86_RS05800 PF00290 Tryptophan synthase alpha chain CCY86_RS05805 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS05815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCY86_RS05815 PF06988 NifT/FixU protein CCY86_RS05830 PF02525 Flavodoxin-like fold CCY86_RS05840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS05840 PF03466 LysR substrate binding domain CCY86_RS05880 PF06903 VirK protein CCY86_RS05905 PF13411 MerR HTH family regulatory protein CCY86_RS05910 PF02627 Carboxymuconolactone decarboxylase family CCY86_RS05915 PF01595 Cyclin M transmembrane N-terminal domain CCY86_RS05915 PF03471 Transporter associated domain CCY86_RS05915 PF00571 CBS domain CCY86_RS05960 PF01266 FAD dependent oxidoreductase CCY86_RS05965 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS05975 PF00005 ABC transporter CCY86_RS05980 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS05990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS06000 PF09339 IclR helix-turn-helix domain CCY86_RS06000 PF01614 Bacterial transcriptional regulator CCY86_RS06005 PF01144 Coenzyme A transferase CCY86_RS06010 PF01144 Coenzyme A transferase CCY86_RS06015 PF02803 Thiolase, C-terminal domain CCY86_RS06015 PF00108 Thiolase, N-terminal domain CCY86_RS06020 PF10397 Adenylosuccinate lyase C-terminus CCY86_RS06020 PF00206 Lyase CCY86_RS06025 PF12146 Serine aminopeptidase, S33 CCY86_RS06030 PF02627 Carboxymuconolactone decarboxylase family CCY86_RS06045 PF00005 ABC transporter CCY86_RS06045 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS06050 PF00005 ABC transporter CCY86_RS06055 PF13458 Periplasmic binding protein CCY86_RS06060 PF03466 LysR substrate binding domain CCY86_RS06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS06065 PF01494 FAD binding domain CCY86_RS06070 PF03537 Glycoside-hydrolase family GH114 CCY86_RS06080 PF01176 Translation initiation factor 1A / IF-1 CCY86_RS06090 PF00483 Nucleotidyl transferase CCY86_RS06095 PF10458 Valyl tRNA synthetase tRNA binding arm CCY86_RS06095 PF08264 Anticodon-binding domain of tRNA CCY86_RS06095 PF00133 tRNA synthetases class I (I, L, M and V) CCY86_RS06100 PF13361 UvrD-like helicase C-terminal domain CCY86_RS06100 PF00580 UvrD/REP helicase N-terminal domain CCY86_RS06110 PF01636 Phosphotransferase enzyme family CCY86_RS06120 PF03641 Possible lysine decarboxylase CCY86_RS06125 PF01612 3'-5' exonuclease CCY86_RS06125 PF00476 DNA polymerase family A CCY86_RS06125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CCY86_RS06125 PF01367 5'-3' exonuclease, C-terminal SAM fold CCY86_RS06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS06135 PF01738 Dienelactone hydrolase family CCY86_RS06145 PF00581 Rhodanese-like domain CCY86_RS06150 PF00892 EamA-like transporter family CCY86_RS06160 PF02609 Exonuclease VII small subunit CCY86_RS06165 PF00348 Polyprenyl synthetase CCY86_RS06170 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CCY86_RS06170 PF02780 Transketolase, C-terminal domain CCY86_RS06170 PF02779 Transketolase, pyrimidine binding domain CCY86_RS06175 PF02649 Type I GTP cyclohydrolase folE2 CCY86_RS06180 PF00814 Glycoprotease family CCY86_RS06190 PF09424 Yqey-like protein CCY86_RS06195 PF08275 DNA primase catalytic core, N-terminal domain CCY86_RS06195 PF10410 DnaB-helicase binding domain of primase CCY86_RS06195 PF08278 DNA primase DnaG DnaB-binding CCY86_RS06195 PF01807 CHC2 zinc finger CCY86_RS06200 PF04542 Sigma-70 region 2 CCY86_RS06200 PF04539 Sigma-70 region 3 CCY86_RS06200 PF00140 Sigma-70 factor, region 1.2 CCY86_RS06200 PF04546 Sigma-70, non-essential region CCY86_RS06200 PF03979 Sigma-70 factor, region 1.1 CCY86_RS06200 PF04545 Sigma-70, region 4 CCY86_RS06220 PF00258 Flavodoxin CCY86_RS06220 PF01613 Flavin reductase like domain CCY86_RS06225 PF00271 Helicase conserved C-terminal domain CCY86_RS06225 PF00270 DEAD/DEAH box helicase CCY86_RS06230 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCY86_RS06235 PF03466 LysR substrate binding domain CCY86_RS06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS06240 PF17954 Quercetinase C-terminal cupin domain CCY86_RS06240 PF02678 Pirin CCY86_RS06245 PF03358 NADPH-dependent FMN reductase CCY86_RS06250 PF17773 UPF0176 acylphosphatase like domain CCY86_RS06255 PF14579 Helix-hairpin-helix motif CCY86_RS06255 PF02811 PHP domain CCY86_RS06255 PF07733 Bacterial DNA polymerase III alpha NTPase domain CCY86_RS06255 PF01336 OB-fold nucleic acid binding domain CCY86_RS06255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CCY86_RS06270 PF00535 Glycosyl transferase family 2 CCY86_RS06280 PF00005 ABC transporter CCY86_RS06280 PF00664 ABC transporter transmembrane region CCY86_RS06295 PF10150 Ribonuclease E/G family CCY86_RS06295 PF00575 S1 RNA binding domain CCY86_RS06300 PF02545 Maf-like protein CCY86_RS06315 PF01467 Cytidylyltransferase-like CCY86_RS06320 PF01218 Coproporphyrinogen III oxidase CCY86_RS06325 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CCY86_RS06325 PF02843 Phosphoribosylglycinamide synthetase, C domain CCY86_RS06325 PF02844 Phosphoribosylglycinamide synthetase, N domain CCY86_RS06330 PF01709 Transcriptional regulator CCY86_RS06335 PF05872 Bacterial protein of unknown function (DUF853) CCY86_RS06345 PF00892 EamA-like transporter family CCY86_RS06355 PF02142 MGS-like domain CCY86_RS06360 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS06360 PF00107 Zinc-binding dehydrogenase CCY86_RS06395 PF02608 ABC transporter substrate-binding protein PnrA-like CCY86_RS06400 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS06405 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS06410 PF00005 ABC transporter CCY86_RS06415 PF07690 Major Facilitator Superfamily CCY86_RS06420 PF02682 Carboxyltransferase domain, subdomain C and D CCY86_RS06425 PF02626 Carboxyltransferase domain, subdomain A and B CCY86_RS06430 PF03746 LamB/YcsF family CCY86_RS06445 PF03480 Bacterial extracellular solute-binding protein, family 7 CCY86_RS06450 PF01470 Pyroglutamyl peptidase CCY86_RS06465 PF04055 Radical SAM superfamily CCY86_RS06465 PF06969 HemN C-terminal domain CCY86_RS06470 PF01725 Ham1 family CCY86_RS06475 PF01138 3' exoribonuclease family, domain 1 CCY86_RS06475 PF03725 3' exoribonuclease family, domain 2 CCY86_RS06485 PF00069 Protein kinase domain CCY86_RS06485 PF08239 Bacterial SH3 domain CCY86_RS06490 PF03755 YicC-like family, N-terminal region CCY86_RS06490 PF08340 Domain of unknown function (DUF1732) CCY86_RS06495 PF00625 Guanylate kinase CCY86_RS06500 PF01192 RNA polymerase Rpb6 CCY86_RS06505 PF13291 ACT domain CCY86_RS06505 PF04607 Region found in RelA / SpoT proteins CCY86_RS06505 PF02824 TGS domain CCY86_RS06515 PF03449 Transcription elongation factor, N-terminal CCY86_RS06515 PF01272 Transcription elongation factor, GreA/GreB, C-term CCY86_RS06535 PF01476 LysM domain CCY86_RS06535 PF04972 BON domain CCY86_RS06545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CCY86_RS06550 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CCY86_RS06550 PF01433 Peptidase family M1 domain CCY86_RS06550 PF11940 Domain of unknown function (DUF3458) Ig-like fold CCY86_RS06560 PF01515 Phosphate acetyl/butaryl transferase CCY86_RS06560 PF03949 Malic enzyme, NAD binding domain CCY86_RS06560 PF00390 Malic enzyme, N-terminal domain CCY86_RS06565 PF13609 Gram-negative porin CCY86_RS06570 PF01014 Uricase CCY86_RS06570 PF09349 OHCU decarboxylase CCY86_RS06580 PF01979 Amidohydrolase family CCY86_RS06585 PF00860 Permease family CCY86_RS06595 PF00576 HIUase/Transthyretin family CCY86_RS06615 PF00106 short chain dehydrogenase CCY86_RS06630 PF00107 Zinc-binding dehydrogenase CCY86_RS06630 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS06645 PF03466 LysR substrate binding domain CCY86_RS06660 PF01169 Uncharacterized protein family UPF0016 CCY86_RS06665 PF01979 Amidohydrolase family CCY86_RS06670 PF00962 Adenosine/AMP deaminase CCY86_RS06680 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCY86_RS06680 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCY86_RS06685 PF01799 [2Fe-2S] binding domain CCY86_RS06685 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS06695 PF00005 ABC transporter CCY86_RS06695 PF09383 NIL domain CCY86_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS06705 PF03180 NLPA lipoprotein CCY86_RS06710 PF01012 Electron transfer flavoprotein domain CCY86_RS06715 PF01012 Electron transfer flavoprotein domain CCY86_RS06715 PF00766 Electron transfer flavoprotein FAD-binding domain CCY86_RS06720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS06720 PF12806 Acetyl-CoA dehydrogenase C-terminal like CCY86_RS06720 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS06720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS06725 PF01266 FAD dependent oxidoreductase CCY86_RS06730 PF01037 Lrp/AsnC ligand binding domain CCY86_RS06735 PF04055 Radical SAM superfamily CCY86_RS06755 PF07995 Glucose / Sorbosone dehydrogenase CCY86_RS06760 PF00886 Ribosomal protein S16 CCY86_RS06765 PF01782 RimM N-terminal domain CCY86_RS06765 PF05239 PRC-barrel domain CCY86_RS06770 PF01746 tRNA (Guanine-1)-methyltransferase CCY86_RS06775 PF01245 Ribosomal protein L19 CCY86_RS06780 PF00293 NUDIX domain CCY86_RS06785 PF17113 Regulatory signalling modulator protein AmpE CCY86_RS06785 PF03186 CobD/Cbib protein CCY86_RS06795 PF03193 RsgA GTPase CCY86_RS06800 PF01435 Peptidase family M48 CCY86_RS06805 PF00929 Exonuclease CCY86_RS06810 PF00994 Probable molybdopterin binding domain CCY86_RS06815 PF04751 Protein of unknown function (DUF615) CCY86_RS06820 PF01523 Putative modulator of DNA gyrase CCY86_RS06825 PF00186 Dihydrofolate reductase CCY86_RS06830 PF00303 Thymidylate synthase CCY86_RS06835 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS06840 PF03741 Integral membrane protein TerC family CCY86_RS06845 PF10017 Histidine-specific methyltransferase, SAM-dependent CCY86_RS06850 PF03781 Sulfatase-modifying factor enzyme 1 CCY86_RS06850 PF12867 DinB superfamily CCY86_RS06855 PF00270 DEAD/DEAH box helicase CCY86_RS06855 PF00271 Helicase conserved C-terminal domain CCY86_RS06925 PF13356 Arm DNA-binding domain CCY86_RS06925 PF00589 Phage integrase family CCY86_RS06935 PF00654 Voltage gated chloride channel CCY86_RS06950 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS06960 PF12848 ABC transporter CCY86_RS06960 PF16326 ABC transporter C-terminal domain CCY86_RS06960 PF00005 ABC transporter CCY86_RS06975 PF01751 Toprim domain CCY86_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS06975 PF00986 DNA gyrase B subunit, carboxyl terminus CCY86_RS06975 PF00204 DNA gyrase B CCY86_RS06980 PF01464 Transglycosylase SLT domain CCY86_RS06985 PF00521 DNA gyrase/topoisomerase IV, subunit A CCY86_RS07000 PF02652 L-lactate permease CCY86_RS07005 PF01734 Patatin-like phospholipase CCY86_RS07020 PF00043 Glutathione S-transferase, C-terminal domain CCY86_RS07020 PF13417 Glutathione S-transferase, N-terminal domain CCY86_RS07025 PF00155 Aminotransferase class I and II CCY86_RS07035 PF00892 EamA-like transporter family CCY86_RS07040 PF01411 tRNA synthetases class II (A) CCY86_RS07040 PF02272 DHHA1 domain CCY86_RS07040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCY86_RS07045 PF00155 Aminotransferase class I and II CCY86_RS07050 PF00183 Hsp90 protein CCY86_RS07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS07095 PF00034 Cytochrome c CCY86_RS07100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCY86_RS07120 PF00881 Nitroreductase family CCY86_RS07125 PF00730 HhH-GPD superfamily base excision DNA repair protein CCY86_RS07125 PF00633 Helix-hairpin-helix motif CCY86_RS07125 PF10576 Iron-sulfur binding domain of endonuclease III CCY86_RS07130 PF04060 Putative Fe-S cluster CCY86_RS07135 PF17938 Tetracyclin repressor-like, C-terminal domain CCY86_RS07135 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS07145 PF00155 Aminotransferase class I and II CCY86_RS07150 PF00271 Helicase conserved C-terminal domain CCY86_RS07150 PF02151 UvrB/uvrC motif CCY86_RS07150 PF12344 Ultra-violet resistance protein B CCY86_RS07150 PF17757 UvrB interaction domain CCY86_RS07150 PF04851 Type III restriction enzyme, res subunit CCY86_RS07160 PF00294 pfkB family carbohydrate kinase CCY86_RS07165 PF00356 Bacterial regulatory proteins, lacI family CCY86_RS07170 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS07175 PF00005 ABC transporter CCY86_RS07185 PF02082 Transcriptional regulator CCY86_RS07190 PF00266 Aminotransferase class-V CCY86_RS07195 PF01592 NifU-like N terminal domain CCY86_RS07200 PF01521 Iron-sulphur cluster biosynthesis CCY86_RS07210 PF07743 HSCB C-terminal oligomerisation domain CCY86_RS07210 PF00226 DnaJ domain CCY86_RS07215 PF00012 Hsp70 protein CCY86_RS07220 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS07225 PF04384 Iron-sulphur cluster assembly CCY86_RS07235 PF01336 OB-fold nucleic acid binding domain CCY86_RS07235 PF00152 tRNA synthetases class II (D, K and N) CCY86_RS07240 PF00106 short chain dehydrogenase CCY86_RS07250 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CCY86_RS07250 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CCY86_RS07255 PF02589 LUD domain CCY86_RS07265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS07265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCY86_RS07270 PF02646 RmuC family CCY86_RS07280 PF03454 MoeA C-terminal region (domain IV) CCY86_RS07280 PF03453 MoeA N-terminal region (domain I and II) CCY86_RS07280 PF00994 Probable molybdopterin binding domain CCY86_RS07285 PF12804 MobA-like NTP transferase domain CCY86_RS07290 PF04055 Radical SAM superfamily CCY86_RS07290 PF06463 Molybdenum Cofactor Synthesis C CCY86_RS07295 PF12111 Polyribonucleotide phosphorylase C terminal CCY86_RS07295 PF00575 S1 RNA binding domain CCY86_RS07295 PF10150 Ribonuclease E/G family CCY86_RS07300 PF01479 S4 domain CCY86_RS07300 PF00849 RNA pseudouridylate synthase CCY86_RS07305 PF13419 Haloacid dehalogenase-like hydrolase CCY86_RS07315 PF01343 Peptidase family S49 CCY86_RS07315 PF06965 Na+/H+ antiporter 1 CCY86_RS07320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS07325 PF02545 Maf-like protein CCY86_RS07330 PF02620 Large ribosomal RNA subunit accumulation protein YceD CCY86_RS07335 PF01783 Ribosomal L32p protein family CCY86_RS07340 PF02504 Fatty acid synthesis protein CCY86_RS07345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCY86_RS07345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCY86_RS07350 PF00698 Acyl transferase domain CCY86_RS07360 PF00550 Phosphopantetheine attachment site CCY86_RS07365 PF00109 Beta-ketoacyl synthase, N-terminal domain CCY86_RS07365 PF02801 Beta-ketoacyl synthase, C-terminal domain CCY86_RS07375 PF08281 Sigma-70, region 4 CCY86_RS07375 PF04542 Sigma-70 region 2 CCY86_RS07390 PF13180 PDZ domain CCY86_RS07390 PF17820 PDZ domain CCY86_RS07400 PF06421 GTP-binding protein LepA C-terminus CCY86_RS07400 PF00679 Elongation factor G C-terminus CCY86_RS07400 PF00009 Elongation factor Tu GTP binding domain CCY86_RS07400 PF03144 Elongation factor Tu domain 2 CCY86_RS07405 PF10502 Signal peptidase, peptidase S26 CCY86_RS07415 PF14622 Ribonuclease-III-like CCY86_RS07415 PF00035 Double-stranded RNA binding motif CCY86_RS07420 PF07650 KH domain CCY86_RS07420 PF01926 50S ribosome-binding GTPase CCY86_RS07425 PF02565 Recombination protein O C terminal CCY86_RS07425 PF11967 Recombination protein O N terminal CCY86_RS07430 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CCY86_RS07435 PF01648 4'-phosphopantetheinyl transferase superfamily CCY86_RS07440 PF00933 Glycosyl hydrolase family 3 N terminal domain CCY86_RS07445 PF08207 Elongation factor P (EF-P) KOW-like domain CCY86_RS07445 PF09285 Elongation factor P, C-terminal CCY86_RS07445 PF01132 Elongation factor P (EF-P) OB domain CCY86_RS07455 PF01541 GIY-YIG catalytic domain CCY86_RS07455 PF08459 UvrC Helix-hairpin-helix N-terminal CCY86_RS07455 PF02151 UvrB/uvrC motif CCY86_RS07460 PF01066 CDP-alcohol phosphatidyltransferase CCY86_RS07480 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS07480 PF00072 Response regulator receiver domain CCY86_RS07490 PF16736 Single Cache-like CCY86_RS07490 PF00989 PAS fold CCY86_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS07490 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS07500 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS07500 PF00072 Response regulator receiver domain CCY86_RS07510 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS07510 PF07729 FCD domain CCY86_RS07515 PF13378 Enolase C-terminal domain-like CCY86_RS07515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCY86_RS07520 PF07690 Major Facilitator Superfamily CCY86_RS07525 PF17137 Domain of unknown function (DUF5110) CCY86_RS07525 PF01055 Glycosyl hydrolases family 31 CCY86_RS07525 PF16338 Domain of unknown function (DUF4968) CCY86_RS07525 PF13802 Galactose mutarotase-like CCY86_RS07530 PF13609 Gram-negative porin CCY86_RS07540 PF13609 Gram-negative porin CCY86_RS07545 PF13417 Glutathione S-transferase, N-terminal domain CCY86_RS07550 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCY86_RS07555 PF07883 Cupin domain CCY86_RS07560 PF00355 Rieske [2Fe-2S] domain CCY86_RS07565 PF13577 SnoaL-like domain CCY86_RS07570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CCY86_RS07570 PF00355 Rieske [2Fe-2S] domain CCY86_RS07575 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS07575 PF00970 Oxidoreductase FAD-binding domain CCY86_RS07575 PF00175 Oxidoreductase NAD-binding domain CCY86_RS07580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS07580 PF03466 LysR substrate binding domain CCY86_RS07585 PF07690 Major Facilitator Superfamily CCY86_RS07590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS07590 PF03466 LysR substrate binding domain CCY86_RS07600 PF01381 Helix-turn-helix CCY86_RS07605 PF00665 Integrase core domain CCY86_RS07605 PF13276 HTH-like domain CCY86_RS07615 PF00067 Cytochrome P450 CCY86_RS07640 PF03466 LysR substrate binding domain CCY86_RS07640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS07645 PF03601 Conserved hypothetical protein 698 CCY86_RS07670 PF11953 Domain of unknown function (DUF3470) CCY86_RS07670 PF00037 4Fe-4S binding domain CCY86_RS07675 PF01368 DHH family CCY86_RS07675 PF17768 RecJ OB domain CCY86_RS07675 PF02272 DHHA1 domain CCY86_RS07685 PF12704 MacB-like periplasmic core domain CCY86_RS07685 PF02687 FtsX-like permease family CCY86_RS07690 PF00005 ABC transporter CCY86_RS07695 PF01026 TatD related DNase CCY86_RS07700 PF03772 Competence protein CCY86_RS07700 PF00753 Metallo-beta-lactamase superfamily CCY86_RS07705 PF14403 Circularly permuted ATP-grasp type 2 CCY86_RS07715 PF08379 Bacterial transglutaminase-like N-terminal region CCY86_RS07715 PF01841 Transglutaminase-like superfamily CCY86_RS07725 PF08386 TAP-like protein CCY86_RS07725 PF00561 alpha/beta hydrolase fold CCY86_RS07730 PF06418 CTP synthase N-terminus CCY86_RS07730 PF00117 Glutamine amidotransferase class-I CCY86_RS07735 PF00793 DAHP synthetase I family CCY86_RS07745 PF00113 Enolase, C-terminal TIM barrel domain CCY86_RS07745 PF03952 Enolase, N-terminal domain CCY86_RS07750 PF04977 Septum formation initiator CCY86_RS07760 PF01430 Hsp33 protein CCY86_RS07765 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS07770 PF04305 Protein of unknown function (DUF455) CCY86_RS07775 PF00561 alpha/beta hydrolase fold CCY86_RS07780 PF04134 Protein of unknown function, DUF393 CCY86_RS07795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS07800 PF02811 PHP domain CCY86_RS07805 PF01300 Telomere recombination CCY86_RS07810 PF02163 Peptidase family M50 CCY86_RS07815 PF00579 tRNA synthetases class I (W and Y) CCY86_RS07820 PF08241 Methyltransferase domain CCY86_RS07825 PF00701 Dihydrodipicolinate synthetase family CCY86_RS07830 PF06804 NlpB/DapX lipoprotein CCY86_RS07835 PF00753 Metallo-beta-lactamase superfamily CCY86_RS07835 PF16123 Hydroxyacylglutathione hydrolase C-terminus CCY86_RS07845 PF08007 Cupin superfamily protein CCY86_RS07850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCY86_RS07860 PF00488 MutS domain V CCY86_RS07860 PF05192 MutS domain III CCY86_RS07860 PF05188 MutS domain II CCY86_RS07860 PF01624 MutS domain I CCY86_RS07860 PF05190 MutS family domain IV CCY86_RS07865 PF03466 LysR substrate binding domain CCY86_RS07865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS07870 PF07690 Major Facilitator Superfamily CCY86_RS07875 PF00248 Aldo/keto reductase family CCY86_RS07880 PF08269 Cache domain CCY86_RS07880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS07885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS07885 PF02203 Tar ligand binding domain homologue CCY86_RS07885 PF00672 HAMP domain CCY86_RS07895 PF00117 Glutamine amidotransferase class-I CCY86_RS07905 PF00459 Inositol monophosphatase family CCY86_RS07910 PF00588 SpoU rRNA Methylase family CCY86_RS07915 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS07920 PF00149 Calcineurin-like phosphoesterase CCY86_RS07925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCY86_RS07930 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCY86_RS07940 PF09190 DALR domain CCY86_RS07940 PF01406 tRNA synthetases class I (C) catalytic domain CCY86_RS07945 PF00730 HhH-GPD superfamily base excision DNA repair protein CCY86_RS07950 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCY86_RS07955 PF01171 PP-loop family CCY86_RS07955 PF09179 TilS substrate binding domain CCY86_RS07955 PF11734 TilS substrate C-terminal domain CCY86_RS07960 PF00696 Amino acid kinase family CCY86_RS07960 PF01842 ACT domain CCY86_RS07960 PF13840 ACT domain CCY86_RS07975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS07980 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS07985 PF12911 N-terminal TM domain of oligopeptide transport permease C CCY86_RS07985 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS07990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS07990 PF00005 ABC transporter CCY86_RS07995 PF00877 NlpC/P60 family CCY86_RS08000 PF01734 Patatin-like phospholipase CCY86_RS08005 PF00749 tRNA synthetases class I (E and Q), catalytic domain CCY86_RS08040 PF01554 MatE CCY86_RS08050 PF01197 Ribosomal protein L31 CCY86_RS08060 PF06167 Glucose-regulated metallo-peptidase M90 CCY86_RS08065 PF00072 Response regulator receiver domain CCY86_RS08065 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS08070 PF02954 Bacterial regulatory protein, Fis family CCY86_RS08070 PF00072 Response regulator receiver domain CCY86_RS08070 PF00158 Sigma-54 interaction domain CCY86_RS08075 PF07498 Rho termination factor, N-terminal domain CCY86_RS08075 PF07497 Rho termination factor, RNA-binding domain CCY86_RS08075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCY86_RS08080 PF00085 Thioredoxin CCY86_RS08090 PF12705 PD-(D/E)XK nuclease superfamily CCY86_RS08090 PF13361 UvrD-like helicase C-terminal domain CCY86_RS08090 PF00580 UvrD/REP helicase N-terminal domain CCY86_RS08100 PF12170 DNA polymerase III tau subunit V interacting with alpha CCY86_RS08100 PF12169 DNA polymerase III subunits gamma and tau domain III CCY86_RS08100 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CCY86_RS08105 PF02575 YbaB/EbfC DNA-binding family CCY86_RS08110 PF03992 Antibiotic biosynthesis monooxygenase CCY86_RS08115 PF02132 RecR protein CCY86_RS08115 PF13662 Toprim domain CCY86_RS08130 PF02515 CoA-transferase family III CCY86_RS08140 PF00005 ABC transporter CCY86_RS08145 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS08150 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS08150 PF16925 Tetracyclin repressor-like, C-terminal domain CCY86_RS08155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCY86_RS08160 PF08659 KR domain CCY86_RS08160 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS08160 PF00109 Beta-ketoacyl synthase, N-terminal domain CCY86_RS08160 PF00550 Phosphopantetheine attachment site CCY86_RS08160 PF14765 Polyketide synthase dehydratase CCY86_RS08160 PF16197 Ketoacyl-synthetase C-terminal extension CCY86_RS08160 PF00698 Acyl transferase domain CCY86_RS08160 PF02801 Beta-ketoacyl synthase, C-terminal domain CCY86_RS08160 PF08990 Erythronolide synthase docking CCY86_RS08165 PF01975 Survival protein SurE CCY86_RS08175 PF01476 LysM domain CCY86_RS08175 PF01551 Peptidase family M23 CCY86_RS08180 PF04539 Sigma-70 region 3 CCY86_RS08180 PF00140 Sigma-70 factor, region 1.2 CCY86_RS08180 PF04542 Sigma-70 region 2 CCY86_RS08180 PF04545 Sigma-70, region 4 CCY86_RS08190 PF05958 tRNA (Uracil-5-)-methyltransferase CCY86_RS08190 PF01938 TRAM domain CCY86_RS08195 PF01027 Inhibitor of apoptosis-promoting Bax1 CCY86_RS08200 PF00334 Nucleoside diphosphate kinase CCY86_RS08205 PF04055 Radical SAM superfamily CCY86_RS08220 PF04551 GcpE protein CCY86_RS08225 PF13393 Histidyl-tRNA synthetase CCY86_RS08225 PF03129 Anticodon binding domain CCY86_RS08230 PF09976 Tetratricopeptide repeat-like domain CCY86_RS08235 PF13360 PQQ-like domain CCY86_RS08240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CCY86_RS08240 PF01926 50S ribosome-binding GTPase CCY86_RS08245 PF17209 Hfq protein CCY86_RS08250 PF16360 GTP-binding GTPase Middle Region CCY86_RS08250 PF01926 50S ribosome-binding GTPase CCY86_RS08250 PF13167 GTP-binding GTPase N-terminal CCY86_RS08255 PF01145 SPFH domain / Band 7 family CCY86_RS08255 PF12221 Bacterial membrane protein N terminal CCY86_RS08260 PF01145 SPFH domain / Band 7 family CCY86_RS08270 PF13393 Histidyl-tRNA synthetase CCY86_RS08275 PF00709 Adenylosuccinate synthetase CCY86_RS08280 PF00156 Phosphoribosyl transferase domain CCY86_RS08290 PF00575 S1 RNA binding domain CCY86_RS08290 PF00773 RNB domain CCY86_RS08290 PF17876 Cold shock domain CCY86_RS08290 PF08206 Ribonuclease B OB domain CCY86_RS08290 PF08461 Ribonuclease R winged-helix domain CCY86_RS08295 PF00588 SpoU rRNA Methylase family CCY86_RS08295 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCY86_RS08300 PF02146 Sir2 family CCY86_RS08305 PF00923 Transaldolase/Fructose-6-phosphate aldolase CCY86_RS08310 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CCY86_RS08315 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CCY86_RS08325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS08325 PF00672 HAMP domain CCY86_RS08330 PF04362 Bacterial Fe(2+) trafficking CCY86_RS08335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCY86_RS08335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCY86_RS08340 PF01380 SIS domain CCY86_RS08340 PF01418 Helix-turn-helix domain, rpiR family CCY86_RS08345 PF14759 Reductase C-terminal CCY86_RS08345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS08365 PF05973 Phage derived protein Gp49-like (DUF891) CCY86_RS08370 PF00355 Rieske [2Fe-2S] domain CCY86_RS08385 PF13407 Periplasmic binding protein domain CCY86_RS08390 PF00005 ABC transporter CCY86_RS08395 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS08400 PF00294 pfkB family carbohydrate kinase CCY86_RS08405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCY86_RS08405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCY86_RS08405 PF00205 Thiamine pyrophosphate enzyme, central domain CCY86_RS08410 PF01261 Xylose isomerase-like TIM barrel CCY86_RS08415 PF04962 KduI/IolB family CCY86_RS08420 PF01261 Xylose isomerase-like TIM barrel CCY86_RS08425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCY86_RS08425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCY86_RS08430 PF00583 Acetyltransferase (GNAT) family CCY86_RS08430 PF00696 Amino acid kinase family CCY86_RS08435 PF00270 DEAD/DEAH box helicase CCY86_RS08435 PF11898 Domain of unknown function (DUF3418) CCY86_RS08435 PF04408 Helicase associated domain (HA2) CCY86_RS08435 PF00271 Helicase conserved C-terminal domain CCY86_RS08435 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CCY86_RS08460 PF18146 Damage-inducible protein CinA KH domain CCY86_RS08460 PF00994 Probable molybdopterin binding domain CCY86_RS08460 PF02464 Competence-damaged protein CCY86_RS08470 PF00120 Glutamine synthetase, catalytic domain CCY86_RS08470 PF03951 Glutamine synthetase, beta-Grasp domain CCY86_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS08480 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS08480 PF00989 PAS fold CCY86_RS08485 PF02954 Bacterial regulatory protein, Fis family CCY86_RS08485 PF00072 Response regulator receiver domain CCY86_RS08485 PF00158 Sigma-54 interaction domain CCY86_RS08495 PF00403 Heavy-metal-associated domain CCY86_RS08500 PF13416 Bacterial extracellular solute-binding protein CCY86_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS08520 PF17912 MalK OB fold domain CCY86_RS08520 PF00005 ABC transporter CCY86_RS08525 PF03009 Glycerophosphoryl diester phosphodiesterase family CCY86_RS08530 PF00676 Dehydrogenase E1 component CCY86_RS08530 PF16870 2-oxoglutarate dehydrogenase C-terminal CCY86_RS08530 PF02779 Transketolase, pyrimidine binding domain CCY86_RS08530 PF16078 2-oxoglutarate dehydrogenase N-terminus CCY86_RS08535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCY86_RS08535 PF00364 Biotin-requiring enzyme CCY86_RS08535 PF02817 e3 binding domain CCY86_RS08540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS08540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCY86_RS08545 PF03969 AFG1-like ATPase CCY86_RS08555 PF00403 Heavy-metal-associated domain CCY86_RS08565 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCY86_RS08580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CCY86_RS08580 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CCY86_RS08585 PF12801 4Fe-4S binding domain CCY86_RS08585 PF13746 4Fe-4S dicluster domain CCY86_RS08585 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CCY86_RS08600 PF00027 Cyclic nucleotide-binding domain CCY86_RS08600 PF13545 Crp-like helix-turn-helix domain CCY86_RS08610 PF04079 Segregation and condensation complex subunit ScpB CCY86_RS08615 PF01479 S4 domain CCY86_RS08615 PF00849 RNA pseudouridylate synthase CCY86_RS08620 PF02576 RimP N-terminal domain CCY86_RS08620 PF17384 RimP C-terminal SH3 domain CCY86_RS08625 PF13184 NusA-like KH domain CCY86_RS08625 PF08529 NusA N-terminal domain CCY86_RS08630 PF00009 Elongation factor Tu GTP binding domain CCY86_RS08630 PF04760 Translation initiation factor IF-2, N-terminal region CCY86_RS08630 PF11987 Translation-initiation factor 2 CCY86_RS08630 PF08364 Bacterial translation initiation factor IF-2 associated region CCY86_RS08635 PF02033 Ribosome-binding factor A CCY86_RS08640 PF01509 TruB family pseudouridylate synthase (N terminal domain) CCY86_RS08640 PF16198 tRNA pseudouridylate synthase B C-terminal domain CCY86_RS08640 PF09157 Pseudouridine synthase II TruB, C-terminal CCY86_RS08645 PF07690 Major Facilitator Superfamily CCY86_RS08650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS08650 PF00529 HlyD membrane-fusion protein of T1SS CCY86_RS08660 PF01047 MarR family CCY86_RS08665 PF00679 Elongation factor G C-terminus CCY86_RS08665 PF00009 Elongation factor Tu GTP binding domain CCY86_RS08665 PF03144 Elongation factor Tu domain 2 CCY86_RS08670 PF04116 Fatty acid hydroxylase superfamily CCY86_RS08675 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS08680 PF01207 Dihydrouridine synthase (Dus) CCY86_RS08695 PF01546 Peptidase family M20/M25/M40 CCY86_RS08695 PF07687 Peptidase dimerisation domain CCY86_RS08715 PF01726 LexA DNA binding domain CCY86_RS08715 PF00717 Peptidase S24-like CCY86_RS08720 PF00970 Oxidoreductase FAD-binding domain CCY86_RS08720 PF00175 Oxidoreductase NAD-binding domain CCY86_RS08725 PF17763 Glutaminase/Asparaginase C-terminal domain CCY86_RS08725 PF00710 Asparaginase, N-terminal CCY86_RS08730 PF01250 Ribosomal protein S6 CCY86_RS08740 PF01084 Ribosomal protein S18 CCY86_RS08745 PF01281 Ribosomal protein L9, N-terminal domain CCY86_RS08745 PF03948 Ribosomal protein L9, C-terminal domain CCY86_RS08750 PF03796 DnaB-like helicase C terminal domain CCY86_RS08750 PF00772 DnaB-like helicase N terminal domain CCY86_RS08760 PF01384 Phosphate transporter family CCY86_RS08765 PF00877 NlpC/P60 family CCY86_RS08775 PF02562 PhoH-like protein CCY86_RS08775 PF13638 PIN domain CCY86_RS08780 PF00578 AhpC/TSA family CCY86_RS08785 PF01522 Polysaccharide deacetylase CCY86_RS08795 PF00551 Formyl transferase CCY86_RS08795 PF01370 NAD dependent epimerase/dehydratase family CCY86_RS08795 PF02911 Formyl transferase, C-terminal domain CCY86_RS08800 PF00535 Glycosyl transferase family 2 CCY86_RS08805 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCY86_RS08810 PF00892 EamA-like transporter family CCY86_RS08815 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CCY86_RS08825 PF00155 Aminotransferase class I and II CCY86_RS08830 PF01842 ACT domain CCY86_RS08830 PF00742 Homoserine dehydrogenase CCY86_RS08830 PF03447 Homoserine dehydrogenase, NAD binding domain CCY86_RS08835 PF14821 Threonine synthase N terminus CCY86_RS08835 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS08840 PF03167 Uracil DNA glycosylase superfamily CCY86_RS08845 PF03453 MoeA N-terminal region (domain I and II) CCY86_RS08845 PF03454 MoeA C-terminal region (domain IV) CCY86_RS08845 PF00994 Probable molybdopterin binding domain CCY86_RS08850 PF02597 ThiS family CCY86_RS08855 PF02391 MoaE protein CCY86_RS08860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CCY86_RS08865 PF10605 3HB-oligomer hydrolase (3HBOH) CCY86_RS08870 PF10431 C-terminal, D2-small domain, of ClpB protein CCY86_RS08870 PF02861 Clp amino terminal domain, pathogenicity island component CCY86_RS08870 PF17871 AAA lid domain CCY86_RS08870 PF07724 AAA domain (Cdc48 subfamily) CCY86_RS08870 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS08880 PF03358 NADPH-dependent FMN reductase CCY86_RS08885 PF09084 NMT1/THI5 like CCY86_RS08890 PF09084 NMT1/THI5 like CCY86_RS08895 PF00296 Luciferase-like monooxygenase CCY86_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS08905 PF00005 ABC transporter CCY86_RS08925 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS08930 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS08935 PF00005 ABC transporter CCY86_RS08935 PF17850 CysA C-terminal regulatory domain CCY86_RS08935 PF12857 TOBE-like domain CCY86_RS08940 PF03466 LysR substrate binding domain CCY86_RS08940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS08955 PF06580 Histidine kinase CCY86_RS08955 PF07694 5TMR of 5TMR-LYT CCY86_RS08960 PF00072 Response regulator receiver domain CCY86_RS08960 PF04397 LytTr DNA-binding domain CCY86_RS08965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCY86_RS08965 PF00205 Thiamine pyrophosphate enzyme, central domain CCY86_RS08965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCY86_RS08970 PF03737 Aldolase/RraA CCY86_RS08990 PF00463 Isocitrate lyase family CCY86_RS09000 PF03466 LysR substrate binding domain CCY86_RS09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS09010 PF01274 Malate synthase CCY86_RS09025 PF00814 Glycoprotease family CCY86_RS09030 PF00583 Acetyltransferase (GNAT) family CCY86_RS09035 PF03167 Uracil DNA glycosylase superfamily CCY86_RS09040 PF07690 Major Facilitator Superfamily CCY86_RS09045 PF00842 Alanine racemase, C-terminal domain CCY86_RS09045 PF01168 Alanine racemase, N-terminal domain CCY86_RS09050 PF18073 Rubredoxin metal binding domain CCY86_RS09055 PF02600 Disulfide bond formation protein DsbB CCY86_RS09060 PF02515 CoA-transferase family III CCY86_RS09065 PF12848 ABC transporter CCY86_RS09065 PF00005 ABC transporter CCY86_RS09075 PF01112 Asparaginase CCY86_RS09080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS09080 PF00005 ABC transporter CCY86_RS09085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS09095 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS09095 PF12911 N-terminal TM domain of oligopeptide transport permease C CCY86_RS09100 PF03576 Peptidase family S58 CCY86_RS09115 PF00873 AcrB/AcrD/AcrF family CCY86_RS09130 PF05175 Methyltransferase small domain CCY86_RS09140 PF01546 Peptidase family M20/M25/M40 CCY86_RS09140 PF07687 Peptidase dimerisation domain CCY86_RS09145 PF03960 ArsC family CCY86_RS09155 PF14602 Hexapeptide repeat of succinyl-transferase CCY86_RS09155 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS09155 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CCY86_RS09160 PF00155 Aminotransferase class I and II CCY86_RS09170 PF12697 Alpha/beta hydrolase family CCY86_RS09175 PF06470 SMC proteins Flexible Hinge Domain CCY86_RS09175 PF02463 RecF/RecN/SMC N terminal domain CCY86_RS09185 PF12826 Helix-hairpin-helix motif CCY86_RS09185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CCY86_RS09185 PF03120 NAD-dependent DNA ligase OB-fold domain CCY86_RS09185 PF01653 NAD-dependent DNA ligase adenylation domain CCY86_RS09185 PF00533 BRCA1 C Terminus (BRCT) domain CCY86_RS09190 PF01327 Polypeptide deformylase CCY86_RS09200 PF01479 S4 domain CCY86_RS09200 PF00849 RNA pseudouridylate synthase CCY86_RS09205 PF01909 Nucleotidyltransferase domain CCY86_RS09205 PF01966 HD domain CCY86_RS09205 PF08335 GlnD PII-uridylyltransferase CCY86_RS09210 PF00557 Metallopeptidase family M24 CCY86_RS09215 PF00318 Ribosomal protein S2 CCY86_RS09220 PF00889 Elongation factor TS CCY86_RS09225 PF00696 Amino acid kinase family CCY86_RS09230 PF01765 Ribosome recycling factor CCY86_RS09235 PF01255 Putative undecaprenyl diphosphate synthase CCY86_RS09245 PF13288 DXP reductoisomerase C-terminal domain CCY86_RS09245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CCY86_RS09245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CCY86_RS09250 PF02163 Peptidase family M50 CCY86_RS09250 PF17820 PDZ domain CCY86_RS09255 PF07244 Surface antigen variable number repeat CCY86_RS09255 PF01103 Surface antigen CCY86_RS09260 PF03938 Outer membrane protein (OmpH-like) CCY86_RS09265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CCY86_RS09265 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS09270 PF07977 FabA-like domain CCY86_RS09275 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS09275 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CCY86_RS09280 PF02684 Lipid-A-disaccharide synthetase CCY86_RS09285 PF01351 Ribonuclease HII CCY86_RS09290 PF00588 SpoU rRNA Methylase family CCY86_RS09290 PF08032 RNA 2'-O ribose methyltransferase substrate binding CCY86_RS09300 PF00561 alpha/beta hydrolase fold CCY86_RS09300 PF00106 short chain dehydrogenase CCY86_RS09310 PF03618 Kinase/pyrophosphorylase CCY86_RS09315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CCY86_RS09315 PF00391 PEP-utilising enzyme, mobile domain CCY86_RS09315 PF02896 PEP-utilising enzyme, TIM barrel domain CCY86_RS09325 PF01145 SPFH domain / Band 7 family CCY86_RS09325 PF16200 C-terminal region of band_7 CCY86_RS09330 PF01668 SmpB protein CCY86_RS09335 PF03364 Polyketide cyclase / dehydrase and lipid transport CCY86_RS09340 PF03658 RnfH family Ubiquitin CCY86_RS09350 PF00892 EamA-like transporter family CCY86_RS09355 PF00478 IMP dehydrogenase / GMP reductase domain CCY86_RS09355 PF00571 CBS domain CCY86_RS09365 PF02540 NAD synthase CCY86_RS09365 PF00117 Glutamine amidotransferase class-I CCY86_RS09365 PF00958 GMP synthase C terminal domain CCY86_RS09405 PF03466 LysR substrate binding domain CCY86_RS09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS09410 PF00775 Dioxygenase CCY86_RS09410 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CCY86_RS09415 PF00775 Dioxygenase CCY86_RS09440 PF03466 LysR substrate binding domain CCY86_RS09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS09450 PF07804 HipA-like C-terminal domain CCY86_RS09450 PF13657 HipA N-terminal domain CCY86_RS09465 PF01242 6-pyruvoyl tetrahydropterin synthase CCY86_RS09470 PF14437 MafB19-like deaminase CCY86_RS09475 PF17676 LD-carboxypeptidase C-terminal domain CCY86_RS09475 PF02016 LD-carboxypeptidase N-terminal domain CCY86_RS09480 PF12848 ABC transporter CCY86_RS09480 PF00005 ABC transporter CCY86_RS09500 PF00171 Aldehyde dehydrogenase family CCY86_RS09510 PF00723 Glycosyl hydrolases family 15 CCY86_RS09520 PF02203 Tar ligand binding domain homologue CCY86_RS09520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS09520 PF00672 HAMP domain CCY86_RS09525 PF02308 MgtC family CCY86_RS09530 PF00501 AMP-binding enzyme CCY86_RS09530 PF07993 Male sterility protein CCY86_RS09530 PF00550 Phosphopantetheine attachment site CCY86_RS09535 PF13478 XdhC Rossmann domain CCY86_RS09535 PF02625 XdhC and CoxI family CCY86_RS09560 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCY86_RS09560 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CCY86_RS09565 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS09565 PF01799 [2Fe-2S] binding domain CCY86_RS09570 PF05981 CreA protein CCY86_RS09575 PF03466 LysR substrate binding domain CCY86_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS09600 PF00881 Nitroreductase family CCY86_RS09615 PF03466 LysR substrate binding domain CCY86_RS09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS09620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCY86_RS09620 PF13378 Enolase C-terminal domain-like CCY86_RS09625 PF02426 Muconolactone delta-isomerase CCY86_RS09630 PF04444 Catechol dioxygenase N terminus CCY86_RS09630 PF00775 Dioxygenase CCY86_RS09635 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CCY86_RS09635 PF00355 Rieske [2Fe-2S] domain CCY86_RS09640 PF00866 Ring hydroxylating beta subunit CCY86_RS09645 PF00970 Oxidoreductase FAD-binding domain CCY86_RS09645 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS09645 PF00175 Oxidoreductase NAD-binding domain CCY86_RS09650 PF00106 short chain dehydrogenase CCY86_RS09655 PF00202 Aminotransferase class-III CCY86_RS09660 PF00155 Aminotransferase class I and II CCY86_RS09680 PF05675 Protein of unknown function (DUF817) CCY86_RS09705 PF01613 Flavin reductase like domain CCY86_RS09760 PF00295 Glycosyl hydrolases family 28 CCY86_RS09765 PF00324 Amino acid permease CCY86_RS09770 PF00324 Amino acid permease CCY86_RS09775 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS09775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCY86_RS09775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCY86_RS09780 PF00857 Isochorismatase family CCY86_RS09785 PF00108 Thiolase, N-terminal domain CCY86_RS09785 PF02803 Thiolase, C-terminal domain CCY86_RS09790 PF12806 Acetyl-CoA dehydrogenase C-terminal like CCY86_RS09790 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS09790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS09790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS09805 PF00144 Beta-lactamase CCY86_RS09810 PF16884 N-terminal domain of oxidoreductase CCY86_RS09810 PF00107 Zinc-binding dehydrogenase CCY86_RS09815 PF00596 Class II Aldolase and Adducin N-terminal domain CCY86_RS09825 PF00106 short chain dehydrogenase CCY86_RS09830 PF00561 alpha/beta hydrolase fold CCY86_RS09835 PF00465 Iron-containing alcohol dehydrogenase CCY86_RS09840 PF07859 alpha/beta hydrolase fold CCY86_RS09870 PF01571 Aminomethyltransferase folate-binding domain CCY86_RS09875 PF02618 YceG-like family CCY86_RS09880 PF02223 Thymidylate kinase CCY86_RS09885 PF09115 DNA polymerase III, delta subunit, C terminal CCY86_RS09895 PF01026 TatD related DNase CCY86_RS09910 PF12867 DinB superfamily CCY86_RS09910 PF03781 Sulfatase-modifying factor enzyme 1 CCY86_RS09915 PF00356 Bacterial regulatory proteins, lacI family CCY86_RS09920 PF01547 Bacterial extracellular solute-binding protein CCY86_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS09930 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS09935 PF12857 TOBE-like domain CCY86_RS09935 PF00005 ABC transporter CCY86_RS09940 PF00149 Calcineurin-like phosphoesterase CCY86_RS09955 PF00676 Dehydrogenase E1 component CCY86_RS09960 PF02779 Transketolase, pyrimidine binding domain CCY86_RS09960 PF02780 Transketolase, C-terminal domain CCY86_RS09965 PF00364 Biotin-requiring enzyme CCY86_RS09965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCY86_RS09965 PF02817 e3 binding domain CCY86_RS09985 PF01965 DJ-1/PfpI family CCY86_RS10045 PF00005 ABC transporter CCY86_RS10050 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS10050 PF00005 ABC transporter CCY86_RS10060 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS10065 PF13458 Periplasmic binding protein CCY86_RS10070 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS10070 PF00501 AMP-binding enzyme CCY86_RS10075 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CCY86_RS10080 PF01641 SelR domain CCY86_RS10085 PF04279 Intracellular septation protein A CCY86_RS10090 PF01722 BolA-like protein CCY86_RS10110 PF00005 ABC transporter CCY86_RS10115 PF13609 Gram-negative porin CCY86_RS10120 PF00072 Response regulator receiver domain CCY86_RS10120 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS10125 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS10125 PF08521 Two-component sensor kinase N-terminal CCY86_RS10125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS10130 PF00005 ABC transporter CCY86_RS10130 PF08402 TOBE domain CCY86_RS10140 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS10145 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS10155 PF03466 LysR substrate binding domain CCY86_RS10155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS10160 PF13186 Iron-sulfur cluster-binding domain CCY86_RS10160 PF04055 Radical SAM superfamily CCY86_RS10180 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CCY86_RS10180 PF02769 AIR synthase related protein, C-terminal domain CCY86_RS10180 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CCY86_RS10190 PF01256 Carbohydrate kinase CCY86_RS10195 PF00342 Phosphoglucose isomerase CCY86_RS10200 PF00005 ABC transporter CCY86_RS10205 PF13472 GDSL-like Lipase/Acylhydrolase family CCY86_RS10210 PF10502 Signal peptidase, peptidase S26 CCY86_RS10215 PF00639 PPIC-type PPIASE domain CCY86_RS10215 PF09312 SurA N-terminal domain CCY86_RS10230 PF00216 Bacterial DNA-binding protein CCY86_RS10235 PF02190 ATP-dependent protease La (LON) substrate-binding domain CCY86_RS10235 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS10235 PF05362 Lon protease (S16) C-terminal proteolytic domain CCY86_RS10240 PF07724 AAA domain (Cdc48 subfamily) CCY86_RS10240 PF10431 C-terminal, D2-small domain, of ClpB protein CCY86_RS10240 PF06689 ClpX C4-type zinc finger CCY86_RS10245 PF00574 Clp protease CCY86_RS10250 PF05697 Bacterial trigger factor protein (TF) CCY86_RS10250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCY86_RS10250 PF05698 Bacterial trigger factor protein (TF) C-terminus CCY86_RS10255 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CCY86_RS10255 PF01266 FAD dependent oxidoreductase CCY86_RS10275 PF00873 AcrB/AcrD/AcrF family CCY86_RS10280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS10305 PF00072 Response regulator receiver domain CCY86_RS10305 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS10310 PF00672 HAMP domain CCY86_RS10310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS10310 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS10315 PF00578 AhpC/TSA family CCY86_RS10320 PF02627 Carboxymuconolactone decarboxylase family CCY86_RS10325 PF02542 YgbB family CCY86_RS10330 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CCY86_RS10335 PF00271 Helicase conserved C-terminal domain CCY86_RS10335 PF17757 UvrB interaction domain CCY86_RS10335 PF03461 TRCF domain CCY86_RS10335 PF00270 DEAD/DEAH box helicase CCY86_RS10335 PF02559 CarD-like/TRCF domain CCY86_RS10340 PF07687 Peptidase dimerisation domain CCY86_RS10340 PF01546 Peptidase family M20/M25/M40 CCY86_RS10350 PF06250 YhcG PDDEXK nuclease domain CCY86_RS10350 PF17761 DUF1016 N-terminal domain CCY86_RS10355 PF01053 Cys/Met metabolism PLP-dependent enzyme CCY86_RS10365 PF00108 Thiolase, N-terminal domain CCY86_RS10365 PF02803 Thiolase, C-terminal domain CCY86_RS10370 PF00919 Uncharacterized protein family UPF0004 CCY86_RS10370 PF18693 TRAM domain CCY86_RS10370 PF04055 Radical SAM superfamily CCY86_RS10375 PF01207 Dihydrouridine synthase (Dus) CCY86_RS10380 PF07879 PHB/PHA accumulation regulator DNA-binding domain CCY86_RS10380 PF05233 PHB accumulation regulatory domain CCY86_RS10385 PF00106 short chain dehydrogenase CCY86_RS10390 PF00108 Thiolase, N-terminal domain CCY86_RS10390 PF02803 Thiolase, C-terminal domain CCY86_RS10395 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CCY86_RS10405 PF02578 Multi-copper polyphenol oxidoreductase laccase CCY86_RS10410 PF01479 S4 domain CCY86_RS10410 PF00849 RNA pseudouridylate synthase CCY86_RS10415 PF13525 Outer membrane lipoprotein CCY86_RS10420 PF04851 Type III restriction enzyme, res subunit CCY86_RS10420 PF13307 Helicase C-terminal domain CCY86_RS10435 PF17674 HHH domain CCY86_RS10435 PF00575 S1 RNA binding domain CCY86_RS10435 PF09371 Tex-like protein N-terminal domain CCY86_RS10435 PF16921 Tex protein YqgF-like domain CCY86_RS10450 PF02705 K+ potassium transporter CCY86_RS10460 PF01180 Dihydroorotate dehydrogenase CCY86_RS10475 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CCY86_RS10480 PF04376 Arginine-tRNA-protein transferase, N terminus CCY86_RS10480 PF04377 Arginine-tRNA-protein transferase, C terminus CCY86_RS10495 PF13183 4Fe-4S dicluster domain CCY86_RS10495 PF11870 Domain of unknown function (DUF3390) CCY86_RS10495 PF02589 LUD domain CCY86_RS10500 PF02754 Cysteine-rich domain CCY86_RS10505 PF09339 IclR helix-turn-helix domain CCY86_RS10505 PF01614 Bacterial transcriptional regulator CCY86_RS10510 PF00768 D-alanyl-D-alanine carboxypeptidase CCY86_RS10515 PF00881 Nitroreductase family CCY86_RS10520 PF03061 Thioesterase superfamily CCY86_RS10530 PF00850 Histone deacetylase domain CCY86_RS10535 PF09361 Phasin protein CCY86_RS10545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCY86_RS10545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS10555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CCY86_RS10555 PF00364 Biotin-requiring enzyme CCY86_RS10555 PF02817 e3 binding domain CCY86_RS10560 PF17831 Pyruvate dehydrogenase E1 component middle domain CCY86_RS10560 PF00456 Transketolase, thiamine diphosphate binding domain CCY86_RS10570 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS10570 PF00989 PAS fold CCY86_RS10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS10575 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS10575 PF00072 Response regulator receiver domain CCY86_RS10580 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CCY86_RS10580 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CCY86_RS10585 PF01432 Peptidase family M3 CCY86_RS10590 PF07969 Amidohydrolase family CCY86_RS10595 PF03372 Endonuclease/Exonuclease/phosphatase family CCY86_RS10600 PF01047 MarR family CCY86_RS10605 PF03328 HpcH/HpaI aldolase/citrate lyase family CCY86_RS10620 PF13520 Amino acid permease CCY86_RS10625 PF00817 impB/mucB/samB family CCY86_RS10625 PF11799 impB/mucB/samB family C-terminal domain CCY86_RS10640 PF02627 Carboxymuconolactone decarboxylase family CCY86_RS10645 PF12833 Helix-turn-helix domain CCY86_RS10645 PF12852 Cupin CCY86_RS10740 PF00216 Bacterial DNA-binding protein CCY86_RS10745 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CCY86_RS10745 PF01588 Putative tRNA binding domain CCY86_RS10745 PF03484 tRNA synthetase B5 domain CCY86_RS10745 PF03147 Ferredoxin-fold anticodon binding domain CCY86_RS10745 PF03483 B3/4 domain CCY86_RS10750 PF01409 tRNA synthetases class II core domain (F) CCY86_RS10750 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CCY86_RS10755 PF00453 Ribosomal protein L20 CCY86_RS10760 PF01632 Ribosomal protein L35 CCY86_RS10765 PF00707 Translation initiation factor IF-3, C-terminal domain CCY86_RS10765 PF05198 Translation initiation factor IF-3, N-terminal domain CCY86_RS10770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CCY86_RS10770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CCY86_RS10770 PF03129 Anticodon binding domain CCY86_RS10770 PF02824 TGS domain CCY86_RS10780 PF13291 ACT domain CCY86_RS10780 PF02824 TGS domain CCY86_RS10780 PF04607 Region found in RelA / SpoT proteins CCY86_RS10785 PF01042 Endoribonuclease L-PSP CCY86_RS10795 PF00106 short chain dehydrogenase CCY86_RS10800 PF01144 Coenzyme A transferase CCY86_RS10805 PF01144 Coenzyme A transferase CCY86_RS10810 PF00072 Response regulator receiver domain CCY86_RS10810 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS10825 PF01264 Chorismate synthase CCY86_RS10830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCY86_RS10830 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CCY86_RS10835 PF07690 Major Facilitator Superfamily CCY86_RS10845 PF01053 Cys/Met metabolism PLP-dependent enzyme CCY86_RS10850 PF00561 alpha/beta hydrolase fold CCY86_RS10860 PF03631 Virulence factor BrkB CCY86_RS10865 PF03358 NADPH-dependent FMN reductase CCY86_RS10875 PF02913 FAD linked oxidases, C-terminal domain CCY86_RS10875 PF01565 FAD binding domain CCY86_RS10945 PF02541 Ppx/GppA phosphatase family CCY86_RS10950 PF13089 Polyphosphate kinase N-terminal domain CCY86_RS10950 PF17941 Polyphosphate kinase C-terminal domain 1 CCY86_RS10950 PF02503 Polyphosphate kinase middle domain CCY86_RS10950 PF13090 Polyphosphate kinase C-terminal domain 2 CCY86_RS10955 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS10955 PF11808 Phosphate regulon sensor protein PhoR CCY86_RS10955 PF00989 PAS fold CCY86_RS10960 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS10960 PF00072 Response regulator receiver domain CCY86_RS10965 PF01895 PhoU domain CCY86_RS10970 PF00005 ABC transporter CCY86_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS10980 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS10985 PF12849 PBP superfamily domain CCY86_RS10990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CCY86_RS10990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CCY86_RS10990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CCY86_RS10990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CCY86_RS10995 PF00809 Pterin binding enzyme CCY86_RS11000 PF17862 AAA+ lid domain CCY86_RS11000 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS11000 PF06480 FtsH Extracellular CCY86_RS11000 PF01434 Peptidase family M41 CCY86_RS11005 PF01728 FtsJ-like methyltransferase CCY86_RS11010 PF01985 CRS1 / YhbY (CRM) domain CCY86_RS11020 PF01272 Transcription elongation factor, GreA/GreB, C-term CCY86_RS11020 PF03449 Transcription elongation factor, N-terminal CCY86_RS11025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCY86_RS11025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CCY86_RS11025 PF02142 MGS-like domain CCY86_RS11030 PF01810 LysE type translocator CCY86_RS11035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CCY86_RS11035 PF00117 Glutamine amidotransferase class-I CCY86_RS11040 PF16177 Acetyl-coenzyme A synthetase N-terminus CCY86_RS11040 PF00501 AMP-binding enzyme CCY86_RS11040 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS11045 PF01476 LysM domain CCY86_RS11045 PF01464 Transglycosylase SLT domain CCY86_RS11050 PF16123 Hydroxyacylglutathione hydrolase C-terminus CCY86_RS11050 PF00753 Metallo-beta-lactamase superfamily CCY86_RS11055 PF08241 Methyltransferase domain CCY86_RS11060 PF00075 RNase H CCY86_RS11095 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS11100 PF00582 Universal stress protein family CCY86_RS11115 PF00264 Common central domain of tyrosinase CCY86_RS11170 PF00589 Phage integrase family CCY86_RS11170 PF13356 Arm DNA-binding domain CCY86_RS11180 PF00929 Exonuclease CCY86_RS11185 PF00551 Formyl transferase CCY86_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS11220 PF03466 LysR substrate binding domain CCY86_RS11225 PF13454 FAD-NAD(P)-binding CCY86_RS11230 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS11235 PF12911 N-terminal TM domain of oligopeptide transport permease C CCY86_RS11235 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS11240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS11240 PF00005 ABC transporter CCY86_RS11245 PF00005 ABC transporter CCY86_RS11245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS11250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS11265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCY86_RS11270 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS11270 PF01799 [2Fe-2S] binding domain CCY86_RS11285 PF17151 Periplasmic sensor domain CCY86_RS11285 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS11290 PF00672 HAMP domain CCY86_RS11290 PF02203 Tar ligand binding domain homologue CCY86_RS11290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS11300 PF03472 Autoinducer binding domain CCY86_RS11300 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS11330 PF00474 Sodium:solute symporter family CCY86_RS11335 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS11335 PF00501 AMP-binding enzyme CCY86_RS11335 PF16177 Acetyl-coenzyme A synthetase N-terminus CCY86_RS11340 PF00892 EamA-like transporter family CCY86_RS11345 PF03350 Uncharacterized protein family, UPF0114 CCY86_RS11355 PF01177 Asp/Glu/Hydantoin racemase CCY86_RS11360 PF00375 Sodium:dicarboxylate symporter family CCY86_RS11375 PF01434 Peptidase family M41 CCY86_RS11375 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS11375 PF17862 AAA+ lid domain CCY86_RS11385 PF01618 MotA/TolQ/ExbB proton channel family CCY86_RS11390 PF02472 Biopolymer transport protein ExbD/TolR CCY86_RS11400 PF03928 Haem-degrading CCY86_RS11430 PF00005 ABC transporter CCY86_RS11435 PF01061 ABC-2 type transporter CCY86_RS11440 PF00156 Phosphoribosyl transferase domain CCY86_RS11455 PF02875 Mur ligase family, glutamate ligase domain CCY86_RS11455 PF08245 Mur ligase middle domain CCY86_RS11460 PF01039 Carboxyl transferase domain CCY86_RS11460 PF17848 Acetyl-coA carboxylase zinc finger domain CCY86_RS11465 PF00290 Tryptophan synthase alpha chain CCY86_RS11470 PF01555 DNA methylase CCY86_RS11475 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS11480 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CCY86_RS11485 PF01416 tRNA pseudouridine synthase CCY86_RS11495 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCY86_RS11495 PF02774 Semialdehyde dehydrogenase, dimerisation domain CCY86_RS11500 PF00180 Isocitrate/isopropylmalate dehydrogenase CCY86_RS11505 PF00694 Aconitase C-terminal domain CCY86_RS11510 PF00330 Aconitase family (aconitate hydratase) CCY86_RS11515 PF00285 Citrate synthase, C-terminal domain CCY86_RS11520 PF03937 Flavinator of succinate dehydrogenase CCY86_RS11525 PF13085 2Fe-2S iron-sulfur cluster binding domain CCY86_RS11530 PF02910 Fumarate reductase flavoprotein C-term CCY86_RS11530 PF00890 FAD binding domain CCY86_RS11535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CCY86_RS11545 PF00155 Aminotransferase class I and II CCY86_RS11545 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS11550 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CCY86_RS11550 PF00056 lactate/malate dehydrogenase, NAD binding domain CCY86_RS11565 PF00285 Citrate synthase, C-terminal domain CCY86_RS11575 PF03972 MmgE/PrpD family CCY86_RS11580 PF00694 Aconitase C-terminal domain CCY86_RS11580 PF00330 Aconitase family (aconitate hydratase) CCY86_RS11595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS11605 PF18027 Cytosolic carboxypeptidase N-terminal domain CCY86_RS11605 PF00246 Zinc carboxypeptidase CCY86_RS11610 PF03883 Peroxide stress protein YaaA CCY86_RS11620 PF00155 Aminotransferase class I and II CCY86_RS11625 PF13417 Glutathione S-transferase, N-terminal domain CCY86_RS11625 PF14497 Glutathione S-transferase, C-terminal domain CCY86_RS11630 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCY86_RS11630 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CCY86_RS11630 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCY86_RS11635 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS11655 PF03466 LysR substrate binding domain CCY86_RS11660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS11660 PF03466 LysR substrate binding domain CCY86_RS11670 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS11670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS11670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS11675 PF02798 Glutathione S-transferase, N-terminal domain CCY86_RS11675 PF00043 Glutathione S-transferase, C-terminal domain CCY86_RS11690 PF01810 LysE type translocator CCY86_RS11700 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCY86_RS11705 PF01730 UreF CCY86_RS11710 PF05194 UreE urease accessory protein, C-terminal domain CCY86_RS11710 PF02814 UreE urease accessory protein, N-terminal domain CCY86_RS11715 PF01979 Amidohydrolase family CCY86_RS11715 PF00449 Urease alpha-subunit, N-terminal domain CCY86_RS11720 PF00699 Urease beta subunit CCY86_RS11730 PF00547 Urease, gamma subunit CCY86_RS11740 PF01774 UreD urease accessory protein CCY86_RS11745 PF00005 ABC transporter CCY86_RS11750 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS11750 PF00005 ABC transporter CCY86_RS11755 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS11760 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS11770 PF01575 MaoC like domain CCY86_RS11775 PF00171 Aldehyde dehydrogenase family CCY86_RS11775 PF01575 MaoC like domain CCY86_RS11780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS11780 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS11780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS11785 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS11785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS11785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS11805 PF00361 Proton-conducting membrane transporter CCY86_RS11810 PF00361 Proton-conducting membrane transporter CCY86_RS11810 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CCY86_RS11815 PF00361 Proton-conducting membrane transporter CCY86_RS11815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CCY86_RS11820 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CCY86_RS11825 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CCY86_RS11830 PF12838 4Fe-4S dicluster domain CCY86_RS11835 PF00146 NADH dehydrogenase CCY86_RS11840 PF00384 Molybdopterin oxidoreductase CCY86_RS11840 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CCY86_RS11840 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CCY86_RS11845 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CCY86_RS11845 PF10531 SLBB domain CCY86_RS11845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CCY86_RS11855 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CCY86_RS11860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CCY86_RS11865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CCY86_RS11870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CCY86_RS11880 PF03840 Preprotein translocase SecG subunit CCY86_RS11885 PF00121 Triosephosphate isomerase CCY86_RS11890 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS11890 PF00107 Zinc-binding dehydrogenase CCY86_RS11900 PF00575 S1 RNA binding domain CCY86_RS11900 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CCY86_RS11900 PF01138 3' exoribonuclease family, domain 1 CCY86_RS11900 PF03725 3' exoribonuclease family, domain 2 CCY86_RS11900 PF00013 KH domain CCY86_RS11905 PF00312 Ribosomal protein S15 CCY86_RS11910 PF13458 Periplasmic binding protein CCY86_RS11920 PF00682 HMGL-like CCY86_RS11920 PF08502 LeuA allosteric (dimerisation) domain CCY86_RS11925 PF01066 CDP-alcohol phosphatidyltransferase CCY86_RS11930 PF02666 Phosphatidylserine decarboxylase CCY86_RS11935 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CCY86_RS11935 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CCY86_RS11940 PF10369 Small subunit of acetolactate synthase CCY86_RS11945 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CCY86_RS11945 PF00205 Thiamine pyrophosphate enzyme, central domain CCY86_RS11945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CCY86_RS11980 PF13439 Glycosyltransferase Family 4 CCY86_RS11980 PF00534 Glycosyl transferases group 1 CCY86_RS11985 PF01219 Prokaryotic diacylglycerol kinase CCY86_RS11990 PF08359 YsiA-like protein, C-terminal region CCY86_RS11990 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS11995 PF03641 Possible lysine decarboxylase CCY86_RS12025 PF12849 PBP superfamily domain CCY86_RS12030 PF03466 LysR substrate binding domain CCY86_RS12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS12055 PF03432 Relaxase/Mobilisation nuclease domain CCY86_RS12105 PF12002 MgsA AAA+ ATPase C terminal CCY86_RS12105 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS12105 PF16193 AAA C-terminal domain CCY86_RS12110 PF16193 AAA C-terminal domain CCY86_RS12110 PF12002 MgsA AAA+ ATPase C terminal CCY86_RS12110 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS12120 PF03548 Outer membrane lipoprotein carrier protein LolA CCY86_RS12125 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CCY86_RS12125 PF17854 FtsK alpha domain CCY86_RS12125 PF09397 Ftsk gamma domain CCY86_RS12125 PF01580 FtsK/SpoIIIE family CCY86_RS12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS12140 PF03458 UPF0126 domain CCY86_RS12145 PF00543 Nitrogen regulatory protein P-II CCY86_RS12150 PF01209 ubiE/COQ5 methyltransferase family CCY86_RS12155 PF02540 NAD synthase CCY86_RS12155 PF00795 Carbon-nitrogen hydrolase CCY86_RS12170 PF00719 Inorganic pyrophosphatase CCY86_RS12175 PF00171 Aldehyde dehydrogenase family CCY86_RS12205 PF02602 Uroporphyrinogen-III synthase HemD CCY86_RS12210 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CCY86_RS12210 PF03900 Porphobilinogen deaminase, C-terminal domain CCY86_RS12215 PF00311 Phosphoenolpyruvate carboxylase CCY86_RS12220 PF07690 Major Facilitator Superfamily CCY86_RS12235 PF04542 Sigma-70 region 2 CCY86_RS12235 PF08281 Sigma-70, region 4 CCY86_RS12245 PF00206 Lyase CCY86_RS12245 PF14698 Argininosuccinate lyase C-terminal CCY86_RS12250 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CCY86_RS12250 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CCY86_RS12250 PF01276 Orn/Lys/Arg decarboxylase, major domain CCY86_RS12255 PF00692 dUTPase CCY86_RS12260 PF02634 FdhD/NarQ family CCY86_RS12265 PF00080 Copper/zinc superoxide dismutase (SODC) CCY86_RS12285 PF13247 4Fe-4S dicluster domain CCY86_RS12290 PF00384 Molybdopterin oxidoreductase CCY86_RS12290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CCY86_RS12290 PF01568 Molydopterin dinucleotide binding domain CCY86_RS12320 PF10609 NUBPL iron-transfer P-loop NTPase CCY86_RS12325 PF00691 OmpA family CCY86_RS12325 PF05736 OprF membrane domain CCY86_RS12330 PF01588 Putative tRNA binding domain CCY86_RS12330 PF09334 tRNA synthetases class I (M) CCY86_RS12340 PF04357 TamB, inner membrane protein subunit of TAM complex CCY86_RS12355 PF02616 Segregation and condensation protein ScpA CCY86_RS12360 PF02569 Pantoate-beta-alanine ligase CCY86_RS12370 PF07685 CobB/CobQ-like glutamine amidotransferase domain CCY86_RS12370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCY86_RS12375 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CCY86_RS12380 PF03186 CobD/Cbib protein CCY86_RS12380 PF17113 Regulatory signalling modulator protein AmpE CCY86_RS12385 PF00155 Aminotransferase class I and II CCY86_RS12390 PF01497 Periplasmic binding protein CCY86_RS12400 PF02654 Cobalamin-5-phosphate synthase CCY86_RS12405 PF02277 Phosphoribosyltransferase CCY86_RS12415 PF00005 ABC transporter CCY86_RS12420 PF01032 FecCD transport family CCY86_RS12425 PF00593 TonB dependent receptor CCY86_RS12425 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS12455 PF01790 Prolipoprotein diacylglyceryl transferase CCY86_RS12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS12460 PF03466 LysR substrate binding domain CCY86_RS12465 PF00920 Dehydratase family CCY86_RS12475 PF04364 DNA polymerase III chi subunit, HolC CCY86_RS12480 PF00883 Cytosol aminopeptidase family, catalytic domain CCY86_RS12480 PF02789 Cytosol aminopeptidase family, N-terminal domain CCY86_RS12505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS12505 PF10414 Sirohaem synthase dimerisation region CCY86_RS12505 PF14824 Sirohaem biosynthesis protein central CCY86_RS12510 PF00009 Elongation factor Tu GTP binding domain CCY86_RS12515 PF01507 Phosphoadenosine phosphosulfate reductase family CCY86_RS12520 PF01507 Phosphoadenosine phosphosulfate reductase family CCY86_RS12530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCY86_RS12530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCY86_RS12535 PF01925 Sulfite exporter TauE/SafE CCY86_RS12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS12540 PF03466 LysR substrate binding domain CCY86_RS12550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCY86_RS12550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCY86_RS12570 PF00072 Response regulator receiver domain CCY86_RS12570 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS12580 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS12580 PF00970 Oxidoreductase FAD-binding domain CCY86_RS12580 PF00175 Oxidoreductase NAD-binding domain CCY86_RS12585 PF00202 Aminotransferase class-III CCY86_RS12595 PF00005 ABC transporter CCY86_RS12600 PF00005 ABC transporter CCY86_RS12600 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS12610 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS12615 PF13458 Periplasmic binding protein CCY86_RS12620 PF02401 LytB protein CCY86_RS12625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CCY86_RS12630 PF04002 RadC-like JAB domain CCY86_RS12635 PF00830 Ribosomal L28 family CCY86_RS12640 PF00471 Ribosomal protein L33 CCY86_RS12645 PF02910 Fumarate reductase flavoprotein C-term CCY86_RS12645 PF00890 FAD binding domain CCY86_RS12650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CCY86_RS12650 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CCY86_RS12655 PF02445 Quinolinate synthetase A protein CCY86_RS12670 PF00924 Mechanosensitive ion channel CCY86_RS12670 PF12794 Mechanosensitive ion channel inner membrane domain 1 CCY86_RS12670 PF12795 Mechanosensitive ion channel porin domain CCY86_RS12675 PF13091 PLD-like domain CCY86_RS12680 PF01189 16S rRNA methyltransferase RsmB/F CCY86_RS12680 PF01029 NusB family CCY86_RS12685 PF00551 Formyl transferase CCY86_RS12690 PF00072 Response regulator receiver domain CCY86_RS12690 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS12695 PF00072 Response regulator receiver domain CCY86_RS12695 PF09308 LuxQ, periplasmic CCY86_RS12695 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS12695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS12700 PF06574 FAD synthetase CCY86_RS12700 PF01687 Riboflavin kinase CCY86_RS12705 PF08264 Anticodon-binding domain of tRNA CCY86_RS12705 PF06827 Zinc finger found in FPG and IleRS CCY86_RS12705 PF00133 tRNA synthetases class I (I, L, M and V) CCY86_RS12710 PF01252 Signal peptidase (SPase) II CCY86_RS12720 PF04127 DNA / pantothenate metabolism flavoprotein CCY86_RS12720 PF02441 Flavoprotein CCY86_RS12725 PF00296 Luciferase-like monooxygenase CCY86_RS12730 PF00692 dUTPase CCY86_RS12735 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS12735 PF17871 AAA lid domain CCY86_RS12735 PF02861 Clp amino terminal domain, pathogenicity island component CCY86_RS12735 PF10431 C-terminal, D2-small domain, of ClpB protein CCY86_RS12735 PF07724 AAA domain (Cdc48 subfamily) CCY86_RS12740 PF02617 ATP-dependent Clp protease adaptor protein ClpS CCY86_RS12745 PF00313 'Cold-shock' DNA-binding domain CCY86_RS12785 PF00180 Isocitrate/isopropylmalate dehydrogenase CCY86_RS12800 PF03150 Di-haem cytochrome c peroxidase CCY86_RS12810 PF12706 Beta-lactamase superfamily domain CCY86_RS12815 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CCY86_RS12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS12820 PF03466 LysR substrate binding domain CCY86_RS12825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS12825 PF03466 LysR substrate binding domain CCY86_RS12830 PF07690 Major Facilitator Superfamily CCY86_RS12835 PF07681 DoxX CCY86_RS12850 PF00701 Dihydrodipicolinate synthetase family CCY86_RS12860 PF04228 Putative neutral zinc metallopeptidase CCY86_RS12900 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS12915 PF11871 Domain of unknown function (DUF3391) CCY86_RS12915 PF01966 HD domain CCY86_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS12955 PF00216 Bacterial DNA-binding protein CCY86_RS12970 PF00106 short chain dehydrogenase CCY86_RS12975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CCY86_RS12975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CCY86_RS12980 PF13742 OB-fold nucleic acid binding domain CCY86_RS12980 PF02601 Exonuclease VII, large subunit CCY86_RS12985 PF01618 MotA/TolQ/ExbB proton channel family CCY86_RS12995 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CCY86_RS13000 PF03966 Trm112p-like protein CCY86_RS13005 PF02348 Cytidylyltransferase CCY86_RS13010 PF05191 Adenylate kinase, active site lid CCY86_RS13015 PF00106 short chain dehydrogenase CCY86_RS13020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS13020 PF03466 LysR substrate binding domain CCY86_RS13025 PF13593 SBF-like CPA transporter family (DUF4137) CCY86_RS13030 PF11741 AMIN domain CCY86_RS13030 PF01520 N-acetylmuramoyl-L-alanine amidase CCY86_RS13035 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CCY86_RS13040 PF08331 Domain of unknown function (DUF1730) CCY86_RS13050 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CCY86_RS13055 PF00589 Phage integrase family CCY86_RS13055 PF02899 Phage integrase, N-terminal SAM-like domain CCY86_RS13060 PF04073 Aminoacyl-tRNA editing domain CCY86_RS13065 PF02660 Glycerol-3-phosphate acyltransferase CCY86_RS13075 PF04461 Protein of unknown function (DUF520) CCY86_RS13080 PF01565 FAD binding domain CCY86_RS13080 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CCY86_RS13110 PF05987 Bacterial protein of unknown function (DUF898) CCY86_RS13115 PF00118 TCP-1/cpn60 chaperonin family CCY86_RS13120 PF00166 Chaperonin 10 Kd subunit CCY86_RS13125 PF00012 Hsp70 protein CCY86_RS13140 PF04381 Putative exonuclease, RdgC CCY86_RS13200 PF00106 short chain dehydrogenase CCY86_RS13210 PF17932 Tetracyclin repressor-like, C-terminal domain CCY86_RS13210 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS13215 PF13417 Glutathione S-transferase, N-terminal domain CCY86_RS13220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS13220 PF02203 Tar ligand binding domain homologue CCY86_RS13220 PF00672 HAMP domain CCY86_RS13225 PF00107 Zinc-binding dehydrogenase CCY86_RS13225 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS13230 PF00756 Putative esterase CCY86_RS13245 PF04403 Paraquat-inducible protein A CCY86_RS13250 PF02470 MlaD protein CCY86_RS13260 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS13260 PF00155 Aminotransferase class I and II CCY86_RS13295 PF11871 Domain of unknown function (DUF3391) CCY86_RS13295 PF01966 HD domain CCY86_RS13310 PF01494 FAD binding domain CCY86_RS13315 PF01425 Amidase CCY86_RS13320 PF00563 EAL domain CCY86_RS13320 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS13320 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS13325 PF01979 Amidohydrolase family CCY86_RS13330 PF06299 Protein of unknown function (DUF1045) CCY86_RS13345 PF07690 Major Facilitator Superfamily CCY86_RS13350 PF13298 DNA polymerase Ligase (LigD) CCY86_RS13350 PF01068 ATP dependent DNA ligase domain CCY86_RS13350 PF04679 ATP dependent DNA ligase C terminal region CCY86_RS13355 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CCY86_RS13360 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CCY86_RS13370 PF13419 Haloacid dehalogenase-like hydrolase CCY86_RS13380 PF01300 Telomere recombination CCY86_RS13380 PF03481 Putative GTP-binding controlling metal-binding CCY86_RS13385 PF02222 ATP-grasp domain CCY86_RS13385 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CCY86_RS13390 PF00731 AIR carboxylase CCY86_RS13395 PF01259 SAICAR synthetase CCY86_RS13400 PF01116 Fructose-bisphosphate aldolase class-II CCY86_RS13405 PF00224 Pyruvate kinase, barrel domain CCY86_RS13405 PF02887 Pyruvate kinase, alpha/beta domain CCY86_RS13410 PF00162 Phosphoglycerate kinase CCY86_RS13415 PF00892 EamA-like transporter family CCY86_RS13430 PF01063 Amino-transferase class IV CCY86_RS13440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCY86_RS13450 PF00561 alpha/beta hydrolase fold CCY86_RS13460 PF01435 Peptidase family M48 CCY86_RS13460 PF13181 Tetratricopeptide repeat CCY86_RS13465 PF01967 MoaC family CCY86_RS13475 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS13475 PF00114 Pilin (bacterial filament) CCY86_RS13480 PF00114 Pilin (bacterial filament) CCY86_RS13480 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS13485 PF03741 Integral membrane protein TerC family CCY86_RS13490 PF00549 CoA-ligase CCY86_RS13490 PF02629 CoA binding domain CCY86_RS13495 PF08442 ATP-grasp domain CCY86_RS13495 PF00549 CoA-ligase CCY86_RS13505 PF02631 RecX family CCY86_RS13510 PF00154 recA bacterial DNA recombination protein CCY86_RS13515 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS13515 PF00072 Response regulator receiver domain CCY86_RS13520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS13520 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS13530 PF08946 Osmosensory transporter coiled coil CCY86_RS13530 PF00083 Sugar (and other) transporter CCY86_RS13545 PF01494 FAD binding domain CCY86_RS13555 PF00072 Response regulator receiver domain CCY86_RS13555 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS13560 PF03466 LysR substrate binding domain CCY86_RS13565 PF05726 Pirin C-terminal cupin domain CCY86_RS13565 PF02678 Pirin CCY86_RS13570 PF01636 Phosphotransferase enzyme family CCY86_RS13575 PF00271 Helicase conserved C-terminal domain CCY86_RS13575 PF00270 DEAD/DEAH box helicase CCY86_RS13580 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS13585 PF09317 Domain of unknown function (DUF1974) CCY86_RS13585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS13585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS13595 PF01575 MaoC like domain CCY86_RS13600 PF02803 Thiolase, C-terminal domain CCY86_RS13600 PF00108 Thiolase, N-terminal domain CCY86_RS13605 PF00501 AMP-binding enzyme CCY86_RS13605 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS13620 PF13247 4Fe-4S dicluster domain CCY86_RS13620 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCY86_RS13620 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS13630 PF00919 Uncharacterized protein family UPF0004 CCY86_RS13630 PF01938 TRAM domain CCY86_RS13630 PF04055 Radical SAM superfamily CCY86_RS13635 PF02562 PhoH-like protein CCY86_RS13640 PF02130 Uncharacterized protein family UPF0054 CCY86_RS13650 PF03471 Transporter associated domain CCY86_RS13650 PF00571 CBS domain CCY86_RS13655 PF00795 Carbon-nitrogen hydrolase CCY86_RS13660 PF02091 Glycyl-tRNA synthetase alpha subunit CCY86_RS13670 PF02092 Glycyl-tRNA synthetase beta subunit CCY86_RS13670 PF05746 DALR anticodon binding domain CCY86_RS13680 PF01553 Acyltransferase CCY86_RS13690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCY86_RS13695 PF00892 EamA-like transporter family CCY86_RS13700 PF00398 Ribosomal RNA adenine dimethylase CCY86_RS13705 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CCY86_RS13710 PF09312 SurA N-terminal domain CCY86_RS13715 PF04453 LPS transport system D CCY86_RS13720 PF01636 Phosphotransferase enzyme family CCY86_RS13735 PF00483 Nucleotidyl transferase CCY86_RS13740 PF00563 EAL domain CCY86_RS13740 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS13740 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS13745 PF05195 Aminopeptidase P, N-terminal domain CCY86_RS13745 PF00557 Metallopeptidase family M24 CCY86_RS13750 PF01494 FAD binding domain CCY86_RS13755 PF01266 FAD dependent oxidoreductase CCY86_RS13760 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CCY86_RS13770 PF01207 Dihydrouridine synthase (Dus) CCY86_RS13775 PF02954 Bacterial regulatory protein, Fis family CCY86_RS13780 PF01808 AICARFT/IMPCHase bienzyme CCY86_RS13780 PF02142 MGS-like domain CCY86_RS13785 PF02075 Crossover junction endodeoxyribonuclease RuvC CCY86_RS13795 PF07499 RuvA, C-terminal domain CCY86_RS13795 PF01330 RuvA N terminal domain CCY86_RS13800 PF05496 Holliday junction DNA helicase RuvB P-loop domain CCY86_RS13800 PF17864 RuvB AAA lid domain CCY86_RS13800 PF05491 RuvB C-terminal winged helix domain CCY86_RS13810 PF00300 Histidine phosphatase superfamily (branch 1) CCY86_RS13815 PF01161 Phosphatidylethanolamine-binding protein CCY86_RS13820 PF02580 D-Tyr-tRNA(Tyr) deacylase CCY86_RS13825 PF00579 tRNA synthetases class I (W and Y) CCY86_RS13825 PF01479 S4 domain CCY86_RS13830 PF03702 Anhydro-N-acetylmuramic acid kinase CCY86_RS13835 PF01521 Iron-sulphur cluster biosynthesis CCY86_RS13850 PF00380 Ribosomal protein S9/S16 CCY86_RS13855 PF00572 Ribosomal protein L13 CCY86_RS13875 PF01979 Amidohydrolase family CCY86_RS13880 PF05161 MOFRL family CCY86_RS13880 PF13660 Domain of unknown function (DUF4147) CCY86_RS13885 PF00180 Isocitrate/isopropylmalate dehydrogenase CCY86_RS13890 PF13230 Glutamine amidotransferases class-II CCY86_RS13895 PF00005 ABC transporter CCY86_RS13900 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS13905 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS13910 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS13915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CCY86_RS13915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CCY86_RS13925 PF00664 ABC transporter transmembrane region CCY86_RS13925 PF00005 ABC transporter CCY86_RS13930 PF03061 Thioesterase superfamily CCY86_RS13935 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS13940 PF00108 Thiolase, N-terminal domain CCY86_RS13940 PF02803 Thiolase, C-terminal domain CCY86_RS13945 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS13945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCY86_RS13945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCY86_RS13950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS13950 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS13950 PF12806 Acetyl-CoA dehydrogenase C-terminal like CCY86_RS13950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS13960 PF01144 Coenzyme A transferase CCY86_RS13965 PF13091 PLD-like domain CCY86_RS13970 PF03372 Endonuclease/Exonuclease/phosphatase family CCY86_RS13975 PF00293 NUDIX domain CCY86_RS13985 PF00152 tRNA synthetases class II (D, K and N) CCY86_RS13985 PF01336 OB-fold nucleic acid binding domain CCY86_RS13985 PF02938 GAD domain CCY86_RS14005 PF05724 Thiopurine S-methyltransferase (TPMT) CCY86_RS14010 PF03109 ABC1 family CCY86_RS14025 PF01209 ubiE/COQ5 methyltransferase family CCY86_RS14035 PF06472 ABC transporter transmembrane region 2 CCY86_RS14035 PF00005 ABC transporter CCY86_RS14050 PF09335 SNARE associated Golgi protein CCY86_RS14055 PF07670 Nucleoside recognition CCY86_RS14065 PF17655 Inward rectifier potassium channel C-terminal domain CCY86_RS14065 PF07885 Ion channel CCY86_RS14070 PF00585 C-terminal regulatory domain of Threonine dehydratase CCY86_RS14070 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS14075 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CCY86_RS14075 PF14489 QueF-like protein CCY86_RS14105 PF00501 AMP-binding enzyme CCY86_RS14105 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS14110 PF01202 Shikimate kinase CCY86_RS14120 PF07859 alpha/beta hydrolase fold CCY86_RS14125 PF04143 Sulphur transport CCY86_RS14155 PF07977 FabA-like domain CCY86_RS14175 PF01522 Polysaccharide deacetylase CCY86_RS14180 PF02801 Beta-ketoacyl synthase, C-terminal domain CCY86_RS14180 PF00109 Beta-ketoacyl synthase, N-terminal domain CCY86_RS14205 PF01212 Beta-eliminating lyase CCY86_RS14210 PF12833 Helix-turn-helix domain CCY86_RS14215 PF00436 Single-strand binding protein family CCY86_RS14220 PF07690 Major Facilitator Superfamily CCY86_RS14225 PF17755 UvrA DNA-binding domain CCY86_RS14225 PF17760 UvrA interaction domain CCY86_RS14235 PF02690 Na+/Pi-cotransporter CCY86_RS14240 PF01810 LysE type translocator CCY86_RS14245 PF00156 Phosphoribosyl transferase domain CCY86_RS14250 PF01965 DJ-1/PfpI family CCY86_RS14260 PF00999 Sodium/hydrogen exchanger family CCY86_RS14260 PF02254 TrkA-N domain CCY86_RS14260 PF02080 TrkA-C domain CCY86_RS14270 PF01380 SIS domain CCY86_RS14270 PF00571 CBS domain CCY86_RS14290 PF00005 ABC transporter CCY86_RS14295 PF04552 Sigma-54, DNA binding domain CCY86_RS14295 PF04963 Sigma-54 factor, core binding domain CCY86_RS14295 PF00309 Sigma-54 factor, Activator interacting domain (AID) CCY86_RS14300 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CCY86_RS14305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCY86_RS14310 PF02603 HPr Serine kinase N terminus CCY86_RS14310 PF07475 HPr Serine kinase C-terminal domain CCY86_RS14320 PF03668 P-loop ATPase protein family CCY86_RS14330 PF00730 HhH-GPD superfamily base excision DNA repair protein CCY86_RS14330 PF00633 Helix-hairpin-helix motif CCY86_RS14330 PF14815 NUDIX domain CCY86_RS14340 PF06827 Zinc finger found in FPG and IleRS CCY86_RS14340 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CCY86_RS14340 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CCY86_RS14350 PF03550 Outer membrane lipoprotein LolB CCY86_RS14355 PF08544 GHMP kinases C terminal CCY86_RS14355 PF00288 GHMP kinases N terminal domain CCY86_RS14365 PF14572 Phosphoribosyl synthetase-associated domain CCY86_RS14365 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CCY86_RS14370 PF14693 Ribosomal protein TL5, C-terminal domain CCY86_RS14370 PF01386 Ribosomal L25p family CCY86_RS14375 PF01195 Peptidyl-tRNA hydrolase CCY86_RS14385 PF00037 4Fe-4S binding domain CCY86_RS14390 PF01467 Cytidylyltransferase-like CCY86_RS14400 PF05193 Peptidase M16 inactive domain CCY86_RS14405 PF00675 Insulinase (Peptidase family M16) CCY86_RS14405 PF05193 Peptidase M16 inactive domain CCY86_RS14410 PF02881 SRP54-type protein, helical bundle domain CCY86_RS14410 PF00448 SRP54-type protein, GTPase domain CCY86_RS14415 PF14497 Glutathione S-transferase, C-terminal domain CCY86_RS14415 PF02798 Glutathione S-transferase, N-terminal domain CCY86_RS14420 PF01557 Fumarylacetoacetate (FAA) hydrolase family CCY86_RS14425 PF03861 ANTAR domain CCY86_RS14425 PF08376 Nitrate and nitrite sensing CCY86_RS14440 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS14445 PF00005 ABC transporter CCY86_RS14450 PF02885 Glycosyl transferase family, helical bundle domain CCY86_RS14455 PF05726 Pirin C-terminal cupin domain CCY86_RS14455 PF02678 Pirin CCY86_RS14465 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS14465 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS14465 PF00563 EAL domain CCY86_RS14470 PF00140 Sigma-70 factor, region 1.2 CCY86_RS14470 PF04545 Sigma-70, region 4 CCY86_RS14470 PF04542 Sigma-70 region 2 CCY86_RS14475 PF02630 SCO1/SenC CCY86_RS14480 PF01040 UbiA prenyltransferase family CCY86_RS14485 PF02628 Cytochrome oxidase assembly protein CCY86_RS14505 PF00510 Cytochrome c oxidase subunit III CCY86_RS14515 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CCY86_RS14520 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCY86_RS14525 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CCY86_RS14525 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCY86_RS14535 PF08241 Methyltransferase domain CCY86_RS14540 PF00156 Phosphoribosyl transferase domain CCY86_RS14545 PF00588 SpoU rRNA Methylase family CCY86_RS14550 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CCY86_RS14550 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CCY86_RS14555 PF02556 Preprotein translocase subunit SecB CCY86_RS14560 PF00462 Glutaredoxin CCY86_RS14565 PF00581 Rhodanese-like domain CCY86_RS14570 PF00300 Histidine phosphatase superfamily (branch 1) CCY86_RS14575 PF03572 Peptidase family S41 CCY86_RS14575 PF13180 PDZ domain CCY86_RS14580 PF00899 ThiF family CCY86_RS14585 PF00210 Ferritin-like domain CCY86_RS14595 PF00391 PEP-utilising enzyme, mobile domain CCY86_RS14595 PF02896 PEP-utilising enzyme, TIM barrel domain CCY86_RS14595 PF05524 PEP-utilising enzyme, N-terminal CCY86_RS14600 PF00381 PTS HPr component phosphorylation site CCY86_RS14610 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CCY86_RS14610 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CCY86_RS14620 PF00909 Ammonium Transporter Family CCY86_RS14625 PF00543 Nitrogen regulatory protein P-II CCY86_RS14635 PF04380 Membrane fusogenic activity CCY86_RS14645 PF01078 Magnesium chelatase, subunit ChlI CCY86_RS14645 PF13335 Magnesium chelatase, subunit ChlI C-terminal CCY86_RS14650 PF00264 Common central domain of tyrosinase CCY86_RS14665 PF01661 Macro domain CCY86_RS14670 PF00578 AhpC/TSA family CCY86_RS14685 PF00072 Response regulator receiver domain CCY86_RS14685 PF00158 Sigma-54 interaction domain CCY86_RS14685 PF02954 Bacterial regulatory protein, Fis family CCY86_RS14690 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS14690 PF02743 Cache domain CCY86_RS14695 PF00375 Sodium:dicarboxylate symporter family CCY86_RS14705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CCY86_RS14710 PF07943 Penicillin-binding protein 5, C-terminal domain CCY86_RS14710 PF00768 D-alanyl-D-alanine carboxypeptidase CCY86_RS14715 PF04359 Protein of unknown function (DUF493) CCY86_RS14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS14720 PF03466 LysR substrate binding domain CCY86_RS14730 PF03099 Biotin/lipoate A/B protein ligase family CCY86_RS14735 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CCY86_RS14735 PF04055 Radical SAM superfamily CCY86_RS14755 PF03880 DbpA RNA binding domain CCY86_RS14755 PF00270 DEAD/DEAH box helicase CCY86_RS14755 PF00271 Helicase conserved C-terminal domain CCY86_RS14775 PF05506 Domain of unknown function (DUF756) CCY86_RS14775 PF04185 Phosphoesterase family CCY86_RS14800 PF09383 NIL domain CCY86_RS14800 PF00005 ABC transporter CCY86_RS14805 PF02405 Permease MlaE CCY86_RS14810 PF08279 HTH domain CCY86_RS14810 PF03099 Biotin/lipoate A/B protein ligase family CCY86_RS14810 PF02237 Biotin protein ligase C terminal domain CCY86_RS14815 PF03309 Type III pantothenate kinase CCY86_RS14825 PF01467 Cytidylyltransferase-like CCY86_RS14835 PF00255 Glutathione peroxidase CCY86_RS14850 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS14890 PF00561 alpha/beta hydrolase fold CCY86_RS14895 PF12091 Protein of unknown function (DUF3567) CCY86_RS14905 PF02607 B12 binding domain CCY86_RS14905 PF02965 Vitamin B12 dependent methionine synthase, activation domain CCY86_RS14905 PF00809 Pterin binding enzyme CCY86_RS14905 PF02310 B12 binding domain CCY86_RS14905 PF02574 Homocysteine S-methyltransferase CCY86_RS14910 PF02965 Vitamin B12 dependent methionine synthase, activation domain CCY86_RS14910 PF02574 Homocysteine S-methyltransferase CCY86_RS14910 PF00809 Pterin binding enzyme CCY86_RS14910 PF02607 B12 binding domain CCY86_RS14910 PF02310 B12 binding domain CCY86_RS14920 PF00072 Response regulator receiver domain CCY86_RS14920 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS14925 PF04397 LytTr DNA-binding domain CCY86_RS14925 PF00072 Response regulator receiver domain CCY86_RS14935 PF07730 Histidine kinase CCY86_RS14935 PF17200 Single Cache domain 2 CCY86_RS14940 PF07043 Protein of unknown function (DUF1328) CCY86_RS14950 PF03485 Arginyl tRNA synthetase N terminal domain CCY86_RS14950 PF00750 tRNA synthetases class I (R) CCY86_RS14950 PF05746 DALR anticodon binding domain CCY86_RS14960 PF13462 Thioredoxin CCY86_RS14965 PF00106 short chain dehydrogenase CCY86_RS14975 PF03992 Antibiotic biosynthesis monooxygenase CCY86_RS14985 PF13411 MerR HTH family regulatory protein CCY86_RS14990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS14990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS14990 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS14995 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CCY86_RS15000 PF00484 Carbonic anhydrase CCY86_RS15020 PF02803 Thiolase, C-terminal domain CCY86_RS15020 PF00108 Thiolase, N-terminal domain CCY86_RS15025 PF00106 short chain dehydrogenase CCY86_RS15030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS15030 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS15030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS15045 PF13419 Haloacid dehalogenase-like hydrolase CCY86_RS15055 PF01039 Carboxyl transferase domain CCY86_RS15065 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS15070 PF04055 Radical SAM superfamily CCY86_RS15070 PF06968 Biotin and Thiamin Synthesis associated domain CCY86_RS15080 PF02785 Biotin carboxylase C-terminal domain CCY86_RS15080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCY86_RS15080 PF00289 Biotin carboxylase, N-terminal domain CCY86_RS15080 PF00364 Biotin-requiring enzyme CCY86_RS15080 PF18140 Propionyl-coenzyme A carboxylase BT domain CCY86_RS15100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS15105 PF00682 HMGL-like CCY86_RS15120 PF16123 Hydroxyacylglutathione hydrolase C-terminus CCY86_RS15120 PF00753 Metallo-beta-lactamase superfamily CCY86_RS15135 PF00561 alpha/beta hydrolase fold CCY86_RS15160 PF02567 Phenazine biosynthesis-like protein CCY86_RS15165 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CCY86_RS15165 PF06594 Haemolysin-type calcium binding protein related domain CCY86_RS15195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CCY86_RS15195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CCY86_RS15200 PF01642 Methylmalonyl-CoA mutase CCY86_RS15200 PF02310 B12 binding domain CCY86_RS15230 PF06772 Bacterial low temperature requirement A protein (LtrA) CCY86_RS15240 PF00155 Aminotransferase class I and II CCY86_RS15250 PF01137 RNA 3'-terminal phosphate cyclase CCY86_RS15250 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CCY86_RS15255 PF10127 RNA repair pathway DNA polymerase beta family CCY86_RS15260 PF01139 tRNA-splicing ligase RtcB CCY86_RS15270 PF00158 Sigma-54 interaction domain CCY86_RS15270 PF06956 Regulator of RNA terminal phosphate cyclase CCY86_RS15285 PF00708 Acylphosphatase CCY86_RS15330 PF00303 Thymidylate synthase CCY86_RS15350 PF01380 SIS domain CCY86_RS15355 PF12804 MobA-like NTP transferase domain CCY86_RS15355 PF14602 Hexapeptide repeat of succinyl-transferase CCY86_RS15355 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS15365 PF01171 PP-loop family CCY86_RS15370 PF02558 Ketopantoate reductase PanE/ApbA CCY86_RS15370 PF08546 Ketopantoate reductase PanE/ApbA C terminal CCY86_RS15375 PF01040 UbiA prenyltransferase family CCY86_RS15380 PF01565 FAD binding domain CCY86_RS15380 PF04030 D-arabinono-1,4-lactone oxidase CCY86_RS15385 PF00106 short chain dehydrogenase CCY86_RS15390 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CCY86_RS15395 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CCY86_RS15395 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS15405 PF02321 Outer membrane efflux protein CCY86_RS15415 PF00005 ABC transporter CCY86_RS15420 PF13533 Biotin-lipoyl like CCY86_RS15430 PF00171 Aldehyde dehydrogenase family CCY86_RS15435 PF03466 LysR substrate binding domain CCY86_RS15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS15440 PF00202 Aminotransferase class-III CCY86_RS15445 PF00491 Arginase family CCY86_RS15465 PF07690 Major Facilitator Superfamily CCY86_RS15470 PF01435 Peptidase family M48 CCY86_RS15475 PF00892 EamA-like transporter family CCY86_RS15480 PF00881 Nitroreductase family CCY86_RS15500 PF02698 DUF218 domain CCY86_RS15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS15510 PF03466 LysR substrate binding domain CCY86_RS15520 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCY86_RS15525 PF05360 yiaA/B two helix domain CCY86_RS15530 PF03372 Endonuclease/Exonuclease/phosphatase family CCY86_RS15535 PF00156 Phosphoribosyl transferase domain CCY86_RS15540 PF03976 Polyphosphate kinase 2 (PPK2) CCY86_RS15545 PF01678 Diaminopimelate epimerase CCY86_RS15560 PF02773 S-adenosylmethionine synthetase, C-terminal domain CCY86_RS15560 PF02772 S-adenosylmethionine synthetase, central domain CCY86_RS15560 PF00438 S-adenosylmethionine synthetase, N-terminal domain CCY86_RS15580 PF00571 CBS domain CCY86_RS15580 PF00478 IMP dehydrogenase / GMP reductase domain CCY86_RS15590 PF01037 Lrp/AsnC ligand binding domain CCY86_RS15625 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS15630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS15630 PF18158 Adaptive response protein AidB N-terminal domain CCY86_RS15630 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS15665 PF03060 Nitronate monooxygenase CCY86_RS15670 PF01964 Radical SAM ThiC family CCY86_RS15670 PF13667 ThiC-associated domain CCY86_RS15675 PF01266 FAD dependent oxidoreductase CCY86_RS15685 PF05690 Thiazole biosynthesis protein ThiG CCY86_RS15690 PF02581 Thiamine monophosphate synthase CCY86_RS15695 PF06983 3-demethylubiquinone-9 3-methyltransferase CCY86_RS15705 PF08543 Phosphomethylpyrimidine kinase CCY86_RS15715 PF00245 Alkaline phosphatase CCY86_RS15720 PF00245 Alkaline phosphatase CCY86_RS15725 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CCY86_RS15725 PF05221 S-adenosyl-L-homocysteine hydrolase CCY86_RS15730 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CCY86_RS15735 PF02219 Methylenetetrahydrofolate reductase CCY86_RS15750 PF01812 5-formyltetrahydrofolate cyclo-ligase family CCY86_RS15755 PF14718 Soluble lytic murein transglycosylase L domain CCY86_RS15755 PF01464 Transglycosylase SLT domain CCY86_RS15765 PF02798 Glutathione S-transferase, N-terminal domain CCY86_RS15765 PF14497 Glutathione S-transferase, C-terminal domain CCY86_RS15770 PF12627 Probable RNA and SrmB- binding site of polymerase A CCY86_RS15770 PF01743 Poly A polymerase head domain CCY86_RS15770 PF01966 HD domain CCY86_RS15775 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS15780 PF05853 beta-keto acid cleavage enzyme CCY86_RS15785 PF00202 Aminotransferase class-III CCY86_RS15810 PF00158 Sigma-54 interaction domain CCY86_RS15810 PF00072 Response regulator receiver domain CCY86_RS15810 PF02954 Bacterial regulatory protein, Fis family CCY86_RS15810 PF02954 Bacterial regulatory protein, Fis family CCY86_RS15810 PF00158 Sigma-54 interaction domain CCY86_RS15810 PF00072 Response regulator receiver domain CCY86_RS15815 PF00989 PAS fold CCY86_RS15815 PF00672 HAMP domain CCY86_RS15815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS15815 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS15825 PF01029 NusB family CCY86_RS15825 PF01189 16S rRNA methyltransferase RsmB/F CCY86_RS15830 PF01435 Peptidase family M48 CCY86_RS15835 PF01810 LysE type translocator CCY86_RS15840 PF00551 Formyl transferase CCY86_RS15840 PF02911 Formyl transferase, C-terminal domain CCY86_RS15850 PF01327 Polypeptide deformylase CCY86_RS15855 PF01476 LysM domain CCY86_RS15860 PF17782 DprA winged helix domain CCY86_RS15860 PF02481 DNA recombination-mediator protein A CCY86_RS15870 PF01131 DNA topoisomerase CCY86_RS15870 PF01751 Toprim domain CCY86_RS15875 PF03466 LysR substrate binding domain CCY86_RS15875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS15880 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS15880 PF00501 AMP-binding enzyme CCY86_RS15885 PF01098 Cell cycle protein CCY86_RS15890 PF03717 Penicillin-binding Protein dimerisation domain CCY86_RS15890 PF00905 Penicillin binding protein transpeptidase domain CCY86_RS15900 PF04085 rod shape-determining protein MreC CCY86_RS15910 PF02686 Glu-tRNAGln amidotransferase C subunit CCY86_RS15915 PF01425 Amidase CCY86_RS15930 PF02934 GatB/GatE catalytic domain CCY86_RS15930 PF02637 GatB domain CCY86_RS15940 PF02899 Phage integrase, N-terminal SAM-like domain CCY86_RS15940 PF00589 Phage integrase family CCY86_RS15945 PF10672 S-adenosylmethionine-dependent methyltransferase CCY86_RS15945 PF17785 PUA-like domain CCY86_RS15950 PF01565 FAD binding domain CCY86_RS15950 PF08031 Berberine and berberine like CCY86_RS15975 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCY86_RS15975 PF07683 Cobalamin synthesis protein cobW C-terminal domain CCY86_RS15980 PF01258 Prokaryotic dksA/traR C4-type zinc finger CCY86_RS15985 PF07683 Cobalamin synthesis protein cobW C-terminal domain CCY86_RS15985 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCY86_RS15990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS15995 PF00227 Proteasome subunit CCY86_RS16000 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS16000 PF07724 AAA domain (Cdc48 subfamily) CCY86_RS16000 PF10431 C-terminal, D2-small domain, of ClpB protein CCY86_RS16015 PF00204 DNA gyrase B CCY86_RS16015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS16015 PF01751 Toprim domain CCY86_RS16015 PF18053 DNA gyrase B subunit insert domain CCY86_RS16015 PF00986 DNA gyrase B subunit, carboxyl terminus CCY86_RS16020 PF00712 DNA polymerase III beta subunit, N-terminal domain CCY86_RS16020 PF02768 DNA polymerase III beta subunit, C-terminal domain CCY86_RS16020 PF02767 DNA polymerase III beta subunit, central domain CCY86_RS16025 PF00308 Bacterial dnaA protein CCY86_RS16025 PF11638 DnaA N-terminal domain CCY86_RS16025 PF08299 Bacterial dnaA protein helix-turn-helix CCY86_RS16035 PF00313 'Cold-shock' DNA-binding domain CCY86_RS16040 PF13614 AAA domain CCY86_RS16045 PF02195 ParB-like nuclease domain CCY86_RS16045 PF17762 HTH domain found in ParB protein CCY86_RS16055 PF00483 Nucleotidyl transferase CCY86_RS16060 PF00083 Sugar (and other) transporter CCY86_RS16065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS16065 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS16070 PF02954 Bacterial regulatory protein, Fis family CCY86_RS16070 PF00158 Sigma-54 interaction domain CCY86_RS16070 PF00072 Response regulator receiver domain CCY86_RS16075 PF10086 YhfC intramembrane metalloprotease CCY86_RS16085 PF08447 PAS fold CCY86_RS16085 PF13426 PAS domain CCY86_RS16085 PF00563 EAL domain CCY86_RS16085 PF08448 PAS fold CCY86_RS16085 PF05231 MASE1 CCY86_RS16085 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS16090 PF13458 Periplasmic binding protein CCY86_RS16095 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS16100 PF11862 Domain of unknown function (DUF3382) CCY86_RS16100 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS16105 PF00005 ABC transporter CCY86_RS16105 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS16110 PF00005 ABC transporter CCY86_RS16115 PF03466 LysR substrate binding domain CCY86_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS16125 PF00654 Voltage gated chloride channel CCY86_RS16135 PF01161 Phosphatidylethanolamine-binding protein CCY86_RS16160 PF16736 Single Cache-like CCY86_RS16160 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS16160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS16160 PF00989 PAS fold CCY86_RS16165 PF00072 Response regulator receiver domain CCY86_RS16170 PF00873 AcrB/AcrD/AcrF family CCY86_RS16175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS16180 PF02321 Outer membrane efflux protein CCY86_RS16190 PF04344 Chemotaxis phosphatase, CheZ CCY86_RS16195 PF00072 Response regulator receiver domain CCY86_RS16200 PF00816 H-NS histone family CCY86_RS16215 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCY86_RS16225 PF07732 Multicopper oxidase CCY86_RS16240 PF00905 Penicillin binding protein transpeptidase domain CCY86_RS16250 PF01494 FAD binding domain CCY86_RS16265 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS16270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS16270 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS16270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS16275 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS16275 PF00501 AMP-binding enzyme CCY86_RS16295 PF00083 Sugar (and other) transporter CCY86_RS16300 PF01381 Helix-turn-helix CCY86_RS16305 PF05973 Phage derived protein Gp49-like (DUF891) CCY86_RS16310 PF07690 Major Facilitator Superfamily CCY86_RS16320 PF01638 HxlR-like helix-turn-helix CCY86_RS16335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS16335 PF03466 LysR substrate binding domain CCY86_RS16345 PF00593 TonB dependent receptor CCY86_RS16345 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS16400 PF07726 ATPase family associated with various cellular activities (AAA) CCY86_RS16400 PF17863 AAA lid domain CCY86_RS16410 PF11992 Domain of unknown function (DUF3488) CCY86_RS16410 PF13559 Domain of unknown function (DUF4129) CCY86_RS16410 PF01841 Transglutaminase-like superfamily CCY86_RS16415 PF00484 Carbonic anhydrase CCY86_RS16420 PF01740 STAS domain CCY86_RS16420 PF00916 Sulfate permease family CCY86_RS16440 PF04303 PrpF protein CCY86_RS16445 PF00330 Aconitase family (aconitate hydratase) CCY86_RS16445 PF00694 Aconitase C-terminal domain CCY86_RS16450 PF00285 Citrate synthase, C-terminal domain CCY86_RS16460 PF06506 Propionate catabolism activator CCY86_RS16460 PF02954 Bacterial regulatory protein, Fis family CCY86_RS16460 PF00158 Sigma-54 interaction domain CCY86_RS16465 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CCY86_RS16470 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CCY86_RS16555 PF00563 EAL domain CCY86_RS16555 PF00360 Phytochrome region CCY86_RS16555 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS16555 PF01590 GAF domain CCY86_RS16580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCY86_RS16590 PF01095 Pectinesterase CCY86_RS16630 PF00437 Type II/IV secretion system protein CCY86_RS16635 PF00482 Type II secretion system (T2SS), protein F CCY86_RS16640 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS16640 PF08334 Type II secretion system (T2SS), protein G CCY86_RS16665 PF00150 Cellulase (glycosyl hydrolase family 5) CCY86_RS16675 PF01554 MatE CCY86_RS16680 PF03621 MbtH-like protein CCY86_RS16685 PF00975 Thioesterase domain CCY86_RS16685 PF00550 Phosphopantetheine attachment site CCY86_RS16685 PF00668 Condensation domain CCY86_RS16685 PF00501 AMP-binding enzyme CCY86_RS16685 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS16690 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS16690 PF00501 AMP-binding enzyme CCY86_RS16690 PF00550 Phosphopantetheine attachment site CCY86_RS16690 PF00668 Condensation domain CCY86_RS16690 PF07993 Male sterility protein CCY86_RS16695 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS16695 PF00668 Condensation domain CCY86_RS16695 PF00550 Phosphopantetheine attachment site CCY86_RS16695 PF00975 Thioesterase domain CCY86_RS16695 PF00501 AMP-binding enzyme CCY86_RS16730 PF12796 Ankyrin repeats (3 copies) CCY86_RS16735 PF04717 Type VI secretion system, phage-baseplate injector CCY86_RS16735 PF06715 Gp5 C-terminal repeat (3 copies) CCY86_RS16760 PF15635 GHH signature containing HNH/Endo VII superfamily nuclease toxin 2 CCY86_RS16760 PF13665 Domain of unknown function (DUF4150) CCY86_RS16810 PF13520 Amino acid permease CCY86_RS16815 PF01554 MatE CCY86_RS16830 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS16840 PF14883 Hypothetical glycosyl hydrolase family 13 CCY86_RS16840 PF01522 Polysaccharide deacetylase CCY86_RS16845 PF00535 Glycosyl transferase family 2 CCY86_RS16860 PF13533 Biotin-lipoyl like CCY86_RS16865 PF03412 Peptidase C39 family CCY86_RS16865 PF00664 ABC transporter transmembrane region CCY86_RS16865 PF00005 ABC transporter CCY86_RS16900 PF00672 HAMP domain CCY86_RS16900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS16900 PF02203 Tar ligand binding domain homologue CCY86_RS16920 PF03060 Nitronate monooxygenase CCY86_RS16925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS16925 PF03466 LysR substrate binding domain CCY86_RS16930 PF03551 Transcriptional regulator PadR-like family CCY86_RS16930 PF10400 Virulence activator alpha C-term CCY86_RS16940 PF02321 Outer membrane efflux protein CCY86_RS16945 PF00873 AcrB/AcrD/AcrF family CCY86_RS16950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS16950 PF00529 HlyD membrane-fusion protein of T1SS CCY86_RS16955 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS16955 PF00072 Response regulator receiver domain CCY86_RS16960 PF00672 HAMP domain CCY86_RS16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS16960 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS16965 PF03060 Nitronate monooxygenase CCY86_RS16975 PF00582 Universal stress protein family CCY86_RS16990 PF00403 Heavy-metal-associated domain CCY86_RS16995 PF13411 MerR HTH family regulatory protein CCY86_RS17005 PF08502 LeuA allosteric (dimerisation) domain CCY86_RS17005 PF00682 HMGL-like CCY86_RS17020 PF01799 [2Fe-2S] binding domain CCY86_RS17020 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS17025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CCY86_RS17030 PF02566 OsmC-like protein CCY86_RS17040 PF04199 Putative cyclase CCY86_RS17050 PF05433 Glycine zipper 2TM domain CCY86_RS17055 PF00563 EAL domain CCY86_RS17055 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS17055 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS17065 PF00816 H-NS histone family CCY86_RS17070 PF07702 UTRA domain CCY86_RS17070 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS17075 PF13609 Gram-negative porin CCY86_RS17080 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS17095 PF13144 Chaperone for flagella basal body P-ring formation CCY86_RS17095 PF17656 FlgA N-terminal domain CCY86_RS17100 PF00460 Flagella basal body rod protein CCY86_RS17105 PF00460 Flagella basal body rod protein CCY86_RS17105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCY86_RS17110 PF03963 Flagellar hook capping protein - N-terminal region CCY86_RS17110 PF13860 FlgD Ig-like domain CCY86_RS17110 PF13861 FlgD Tudor-like domain CCY86_RS17115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCY86_RS17115 PF00460 Flagella basal body rod protein CCY86_RS17115 PF07559 Flagellar basal body protein FlaE CCY86_RS17120 PF00460 Flagella basal body rod protein CCY86_RS17120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCY86_RS17125 PF00460 Flagella basal body rod protein CCY86_RS17125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCY86_RS17130 PF02107 Flagellar L-ring protein CCY86_RS17135 PF02119 Flagellar P-ring protein CCY86_RS17140 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CCY86_RS17140 PF10135 Rod binding protein CCY86_RS17145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CCY86_RS17145 PF00460 Flagella basal body rod protein CCY86_RS17150 PF00669 Bacterial flagellin N-terminal helical region CCY86_RS17180 PF01311 Bacterial export proteins, family 1 CCY86_RS17185 PF01313 Bacterial export proteins, family 3 CCY86_RS17190 PF00813 FliP family CCY86_RS17195 PF04347 Flagellar biosynthesis protein, FliO CCY86_RS17200 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CCY86_RS17205 PF02154 Flagellar motor switch protein FliM CCY86_RS17205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CCY86_RS17215 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS17215 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS17215 PF00563 EAL domain CCY86_RS17220 PF00072 Response regulator receiver domain CCY86_RS17220 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS17225 PF00700 Bacterial flagellin C-terminal helical region CCY86_RS17225 PF00669 Bacterial flagellin N-terminal helical region CCY86_RS17230 PF07195 Flagellar hook-associated protein 2 C-terminus CCY86_RS17230 PF02465 Flagellar hook-associated protein 2 N-terminus CCY86_RS17230 PF07196 Flagellin hook IN motif CCY86_RS17235 PF02561 Flagellar protein FliS CCY86_RS17245 PF01047 MarR family CCY86_RS17250 PF00535 Glycosyl transferase family 2 CCY86_RS17260 PF02049 Flagellar hook-basal body complex protein FliE CCY86_RS17265 PF08345 Flagellar M-ring protein C-terminal CCY86_RS17265 PF01514 Secretory protein of YscJ/FliF family CCY86_RS17270 PF14842 FliG N-terminal domain CCY86_RS17270 PF01706 FliG C-terminal domain CCY86_RS17270 PF14841 FliG middle domain CCY86_RS17275 PF02108 Flagellar assembly protein FliH CCY86_RS17280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCY86_RS17280 PF18269 T3SS EscN ATPase C-terminal domain CCY86_RS17300 PF00360 Phytochrome region CCY86_RS17300 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS17300 PF00563 EAL domain CCY86_RS17300 PF01590 GAF domain CCY86_RS17315 PF00360 Phytochrome region CCY86_RS17315 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS17315 PF01590 GAF domain CCY86_RS17315 PF00563 EAL domain CCY86_RS17335 PF00501 AMP-binding enzyme CCY86_RS17390 PF07690 Major Facilitator Superfamily CCY86_RS17400 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS17400 PF00593 TonB dependent receptor CCY86_RS17410 PF04542 Sigma-70 region 2 CCY86_RS17410 PF08281 Sigma-70, region 4 CCY86_RS17415 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS17415 PF00593 TonB dependent receptor CCY86_RS17420 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS17425 PF02423 Ornithine cyclodeaminase/mu-crystallin family CCY86_RS17430 PF06276 Ferric iron reductase FhuF-like transporter CCY86_RS17430 PF04183 IucA / IucC family CCY86_RS17435 PF07690 Major Facilitator Superfamily CCY86_RS17440 PF06276 Ferric iron reductase FhuF-like transporter CCY86_RS17440 PF04183 IucA / IucC family CCY86_RS17445 PF04183 IucA / IucC family CCY86_RS17445 PF06276 Ferric iron reductase FhuF-like transporter CCY86_RS17450 PF03328 HpcH/HpaI aldolase/citrate lyase family CCY86_RS17455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CCY86_RS17455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCY86_RS17460 PF00156 Phosphoribosyl transferase domain CCY86_RS17460 PF01738 Dienelactone hydrolase family CCY86_RS17515 PF00149 Calcineurin-like phosphoesterase CCY86_RS17520 PF03824 High-affinity nickel-transport protein CCY86_RS17525 PF02583 Metal-sensitive transcriptional repressor CCY86_RS17530 PF09828 Chromate resistance exported protein CCY86_RS17535 PF02417 Chromate transporter CCY86_RS17540 PF09828 Chromate resistance exported protein CCY86_RS17545 PF00814 Glycoprotease family CCY86_RS17545 PF00583 Acetyltransferase (GNAT) family CCY86_RS17550 PF03466 LysR substrate binding domain CCY86_RS17550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS17570 PF03466 LysR substrate binding domain CCY86_RS17575 PF14552 Tautomerase enzyme CCY86_RS17600 PF00330 Aconitase family (aconitate hydratase) CCY86_RS17600 PF00694 Aconitase C-terminal domain CCY86_RS17615 PF01820 D-ala D-ala ligase N-terminus CCY86_RS17615 PF07478 D-ala D-ala ligase C-terminus CCY86_RS17620 PF07690 Major Facilitator Superfamily CCY86_RS17625 PF00248 Aldo/keto reductase family CCY86_RS17630 PF03466 LysR substrate binding domain CCY86_RS17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS17640 PF01925 Sulfite exporter TauE/SafE CCY86_RS17645 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CCY86_RS17645 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CCY86_RS17655 PF00561 alpha/beta hydrolase fold CCY86_RS17665 PF02600 Disulfide bond formation protein DsbB CCY86_RS17670 PF00975 Thioesterase domain CCY86_RS17675 PF00109 Beta-ketoacyl synthase, N-terminal domain CCY86_RS17675 PF00698 Acyl transferase domain CCY86_RS17675 PF00550 Phosphopantetheine attachment site CCY86_RS17675 PF00668 Condensation domain CCY86_RS17675 PF02801 Beta-ketoacyl synthase, C-terminal domain CCY86_RS17675 PF16197 Ketoacyl-synthetase C-terminal extension CCY86_RS17680 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS17680 PF00501 AMP-binding enzyme CCY86_RS17680 PF00668 Condensation domain CCY86_RS17680 PF00550 Phosphopantetheine attachment site CCY86_RS17685 PF00698 Acyl transferase domain CCY86_RS17685 PF02801 Beta-ketoacyl synthase, C-terminal domain CCY86_RS17685 PF08659 KR domain CCY86_RS17685 PF00550 Phosphopantetheine attachment site CCY86_RS17685 PF14765 Polyketide synthase dehydratase CCY86_RS17685 PF00109 Beta-ketoacyl synthase, N-terminal domain CCY86_RS17685 PF16197 Ketoacyl-synthetase C-terminal extension CCY86_RS17700 PF00501 AMP-binding enzyme CCY86_RS17705 PF03061 Thioesterase superfamily CCY86_RS17725 PF01048 Phosphorylase superfamily CCY86_RS17725 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CCY86_RS17735 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS17740 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS17745 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS17765 PF00072 Response regulator receiver domain CCY86_RS17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS17775 PF03466 LysR substrate binding domain CCY86_RS17775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS17780 PF00355 Rieske [2Fe-2S] domain CCY86_RS17785 PF00175 Oxidoreductase NAD-binding domain CCY86_RS17785 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS17790 PF01047 MarR family CCY86_RS17795 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS17800 PF00171 Aldehyde dehydrogenase family CCY86_RS17810 PF02830 V4R domain CCY86_RS17810 PF00158 Sigma-54 interaction domain CCY86_RS17810 PF02954 Bacterial regulatory protein, Fis family CCY86_RS17810 PF06505 Activator of aromatic catabolism CCY86_RS17820 PF00171 Aldehyde dehydrogenase family CCY86_RS17835 PF07859 alpha/beta hydrolase fold CCY86_RS17840 PF08241 Methyltransferase domain CCY86_RS17845 PF04909 Amidohydrolase CCY86_RS17850 PF07690 Major Facilitator Superfamily CCY86_RS17855 PF00128 Alpha amylase, catalytic domain CCY86_RS17860 PF02446 4-alpha-glucanotransferase CCY86_RS17865 PF00128 Alpha amylase, catalytic domain CCY86_RS17865 PF11941 Domain of unknown function (DUF3459) CCY86_RS17865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CCY86_RS17870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CCY86_RS17870 PF00128 Alpha amylase, catalytic domain CCY86_RS17875 PF00128 Alpha amylase, catalytic domain CCY86_RS17875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CCY86_RS17875 PF02806 Alpha amylase, C-terminal all-beta domain CCY86_RS17880 PF00128 Alpha amylase, catalytic domain CCY86_RS17880 PF16657 Maltogenic Amylase, C-terminal domain CCY86_RS17885 PF11896 Domain of unknown function (DUF3416) CCY86_RS17885 PF00128 Alpha amylase, catalytic domain CCY86_RS17890 PF08323 Starch synthase catalytic domain CCY86_RS17890 PF00534 Glycosyl transferases group 1 CCY86_RS17895 PF00005 ABC transporter CCY86_RS17900 PF01032 FecCD transport family CCY86_RS17905 PF01497 Periplasmic binding protein CCY86_RS17910 PF05171 Haemin-degrading HemS.ChuX domain CCY86_RS17915 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS17915 PF00593 TonB dependent receptor CCY86_RS17920 PF00578 AhpC/TSA family CCY86_RS17920 PF10417 C-terminal domain of 1-Cys peroxiredoxin CCY86_RS17925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS17925 PF13192 Thioredoxin domain CCY86_RS17930 PF01475 Ferric uptake regulator family CCY86_RS17950 PF07670 Nucleoside recognition CCY86_RS17950 PF17910 FeoB cytosolic helical domain CCY86_RS17950 PF02421 Ferrous iron transport protein B CCY86_RS17950 PF07664 Ferrous iron transport protein B C terminus CCY86_RS17950 PF04023 FeoA domain CCY86_RS17960 PF00563 EAL domain CCY86_RS17960 PF08448 PAS fold CCY86_RS17960 PF13426 PAS domain CCY86_RS17960 PF08447 PAS fold CCY86_RS17960 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS17960 PF05231 MASE1 CCY86_RS17965 PF00563 EAL domain CCY86_RS17965 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS17965 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS17970 PF08447 PAS fold CCY86_RS17970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS17990 PF01470 Pyroglutamyl peptidase CCY86_RS18005 PF04349 Periplasmic glucan biosynthesis protein, MdoG CCY86_RS18020 PF07687 Peptidase dimerisation domain CCY86_RS18020 PF01546 Peptidase family M20/M25/M40 CCY86_RS18025 PF02666 Phosphatidylserine decarboxylase CCY86_RS18030 PF07690 Major Facilitator Superfamily CCY86_RS18035 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS18035 PF00107 Zinc-binding dehydrogenase CCY86_RS18040 PF01593 Flavin containing amine oxidoreductase CCY86_RS18050 PF02627 Carboxymuconolactone decarboxylase family CCY86_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS18065 PF03466 LysR substrate binding domain CCY86_RS18125 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS18125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CCY86_RS18130 PF08274 PhnA Zinc-Ribbon CCY86_RS18130 PF03831 PhnA domain CCY86_RS18135 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CCY86_RS18170 PF05860 haemagglutination activity domain CCY86_RS18170 PF13332 Hemagglutinin repeat CCY86_RS18170 PF13018 Extended Signal Peptide of Type V secretion system CCY86_RS18170 PF05594 Haemagluttinin repeat CCY86_RS18180 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CCY86_RS18180 PF17287 POTRA domain CCY86_RS18180 PF08479 POTRA domain, ShlB-type CCY86_RS18185 PF13145 PPIC-type PPIASE domain CCY86_RS18190 PF02661 Fic/DOC family CCY86_RS18205 PF00324 Amino acid permease CCY86_RS18220 PF01494 FAD binding domain CCY86_RS18245 PF07731 Multicopper oxidase CCY86_RS18245 PF07732 Multicopper oxidase CCY86_RS18250 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CCY86_RS18250 PF03171 2OG-Fe(II) oxygenase superfamily CCY86_RS18275 PF00563 EAL domain CCY86_RS18275 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS18275 PF13188 PAS domain CCY86_RS18275 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS18290 PF03706 Lysylphosphatidylglycerol synthase TM region CCY86_RS18290 PF09924 Uncharacterised conserved protein (DUF2156) CCY86_RS18305 PF01740 STAS domain CCY86_RS18305 PF00916 Sulfate permease family CCY86_RS18315 PF08348 YheO-like PAS domain CCY86_RS18315 PF13309 HTH domain CCY86_RS18320 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS18325 PF01042 Endoribonuclease L-PSP CCY86_RS18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS18330 PF03466 LysR substrate binding domain CCY86_RS18340 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS18340 PF00072 Response regulator receiver domain CCY86_RS18355 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS18355 PF00072 Response regulator receiver domain CCY86_RS18370 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS18375 PF00005 ABC transporter CCY86_RS18380 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS18380 PF07702 UTRA domain CCY86_RS18385 PF01136 Peptidase family U32 CCY86_RS18390 PF01136 Peptidase family U32 CCY86_RS18395 PF02036 SCP-2 sterol transfer family CCY86_RS18400 PF08859 DGC domain CCY86_RS18405 PF00027 Cyclic nucleotide-binding domain CCY86_RS18405 PF13545 Crp-like helix-turn-helix domain CCY86_RS18420 PF07690 Major Facilitator Superfamily CCY86_RS18425 PF07690 Major Facilitator Superfamily CCY86_RS18435 PF14710 Respiratory nitrate reductase alpha N-terminal CCY86_RS18435 PF01568 Molydopterin dinucleotide binding domain CCY86_RS18435 PF00384 Molybdopterin oxidoreductase CCY86_RS18440 PF14711 Respiratory nitrate reductase beta C-terminal CCY86_RS18440 PF13247 4Fe-4S dicluster domain CCY86_RS18445 PF02613 Nitrate reductase delta subunit CCY86_RS18450 PF02665 Nitrate reductase gamma subunit CCY86_RS18455 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CCY86_RS18460 PF07730 Histidine kinase CCY86_RS18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS18460 PF00672 HAMP domain CCY86_RS18460 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CCY86_RS18465 PF00072 Response regulator receiver domain CCY86_RS18465 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS18470 PF01553 Acyltransferase CCY86_RS18495 PF01323 DSBA-like thioredoxin domain CCY86_RS18505 PF00999 Sodium/hydrogen exchanger family CCY86_RS18505 PF02254 TrkA-N domain CCY86_RS18510 PF03358 NADPH-dependent FMN reductase CCY86_RS18520 PF16861 Carbamoyltransferase C-terminus CCY86_RS18520 PF02543 Carbamoyltransferase N-terminus CCY86_RS18535 PF16861 Carbamoyltransferase C-terminus CCY86_RS18535 PF02543 Carbamoyltransferase N-terminus CCY86_RS18550 PF00561 alpha/beta hydrolase fold CCY86_RS18560 PF00691 OmpA family CCY86_RS18575 PF01063 Amino-transferase class IV CCY86_RS18585 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CCY86_RS18600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS18600 PF03466 LysR substrate binding domain CCY86_RS18610 PF00561 alpha/beta hydrolase fold CCY86_RS18655 PF04717 Type VI secretion system, phage-baseplate injector CCY86_RS18665 PF05593 RHS Repeat CCY86_RS18665 PF03527 RHS protein CCY86_RS18695 PF00005 ABC transporter CCY86_RS18700 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS18705 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS18710 PF01037 Lrp/AsnC ligand binding domain CCY86_RS18715 PF02423 Ornithine cyclodeaminase/mu-crystallin family CCY86_RS18725 PF13419 Haloacid dehalogenase-like hydrolase CCY86_RS18740 PF01979 Amidohydrolase family CCY86_RS18745 PF01546 Peptidase family M20/M25/M40 CCY86_RS18745 PF07687 Peptidase dimerisation domain CCY86_RS18750 PF00672 HAMP domain CCY86_RS18750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS18750 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS18755 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS18755 PF00072 Response regulator receiver domain CCY86_RS18785 PF02321 Outer membrane efflux protein CCY86_RS18790 PF00529 HlyD membrane-fusion protein of T1SS CCY86_RS18790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS18795 PF00873 AcrB/AcrD/AcrF family CCY86_RS18800 PF01230 HIT domain CCY86_RS18810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCY86_RS18810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS18810 PF01842 ACT domain CCY86_RS18820 PF02203 Tar ligand binding domain homologue CCY86_RS18820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS18820 PF00672 HAMP domain CCY86_RS18835 PF02350 UDP-N-acetylglucosamine 2-epimerase CCY86_RS18855 PF00924 Mechanosensitive ion channel CCY86_RS18885 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CCY86_RS18885 PF04717 Type VI secretion system, phage-baseplate injector CCY86_RS18885 PF13296 Putative type VI secretion system Rhs element Vgr CCY86_RS18890 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS18890 PF05230 MASE2 domain CCY86_RS18895 PF01566 Natural resistance-associated macrophage protein CCY86_RS18900 PF00012 Hsp70 protein CCY86_RS18910 PF00072 Response regulator receiver domain CCY86_RS18910 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS18915 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS18920 PF13460 NAD(P)H-binding CCY86_RS18940 PF13533 Biotin-lipoyl like CCY86_RS18945 PF00873 AcrB/AcrD/AcrF family CCY86_RS18950 PF00543 Nitrogen regulatory protein P-II CCY86_RS18955 PF01433 Peptidase family M1 domain CCY86_RS18965 PF00665 Integrase core domain CCY86_RS18985 PF00437 Type II/IV secretion system protein CCY86_RS18990 PF00482 Type II secretion system (T2SS), protein F CCY86_RS19000 PF08334 Type II secretion system (T2SS), protein G CCY86_RS19000 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS19010 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS19010 PF08334 Type II secretion system (T2SS), protein G CCY86_RS19030 PF00263 Bacterial type II and III secretion system protein CCY86_RS19030 PF11741 AMIN domain CCY86_RS19030 PF07660 Secretin and TonB N terminus short domain CCY86_RS19030 PF03958 Bacterial type II/III secretion system short domain CCY86_RS19050 PF05922 Peptidase inhibitor I9 CCY86_RS19050 PF00082 Subtilase family CCY86_RS19055 PF05138 Phenylacetic acid catabolic protein CCY86_RS19060 PF06243 Phenylacetic acid degradation B CCY86_RS19065 PF05138 Phenylacetic acid catabolic protein CCY86_RS19070 PF01883 Iron-sulfur cluster assembly protein CCY86_RS19075 PF00970 Oxidoreductase FAD-binding domain CCY86_RS19075 PF00111 2Fe-2S iron-sulfur cluster binding domain CCY86_RS19075 PF00175 Oxidoreductase NAD-binding domain CCY86_RS19130 PF01638 HxlR-like helix-turn-helix CCY86_RS19135 PF02525 Flavodoxin-like fold CCY86_RS19155 PF01053 Cys/Met metabolism PLP-dependent enzyme CCY86_RS19160 PF00881 Nitroreductase family CCY86_RS19165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CCY86_RS19165 PF07685 CobB/CobQ-like glutamine amidotransferase domain CCY86_RS19170 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CCY86_RS19175 PF07683 Cobalamin synthesis protein cobW C-terminal domain CCY86_RS19175 PF02492 CobW/HypB/UreG, nucleotide-binding domain CCY86_RS19180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCY86_RS19180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS19185 PF01890 Cobalamin synthesis G C-terminus CCY86_RS19185 PF11761 Cobalamin biosynthesis central region CCY86_RS19185 PF11760 Cobalamin synthesis G N-terminal CCY86_RS19190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS19195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS19200 PF01888 CbiD CCY86_RS19205 PF01903 CbiX CCY86_RS19210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CCY86_RS19210 PF10414 Sirohaem synthase dimerisation region CCY86_RS19210 PF14824 Sirohaem biosynthesis protein central CCY86_RS19215 PF07728 AAA domain (dynein-related subfamily) CCY86_RS19215 PF17863 AAA lid domain CCY86_RS19215 PF13519 von Willebrand factor type A domain CCY86_RS19220 PF02514 CobN/Magnesium Chelatase CCY86_RS19230 PF03824 High-affinity nickel-transport protein CCY86_RS19235 PF00005 ABC transporter CCY86_RS19240 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS19245 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS19250 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS19255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CCY86_RS19260 PF01757 Acyltransferase family CCY86_RS19270 PF00664 ABC transporter transmembrane region CCY86_RS19270 PF00005 ABC transporter CCY86_RS19275 PF12706 Beta-lactamase superfamily domain CCY86_RS19275 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain CCY86_RS19280 PF03621 MbtH-like protein CCY86_RS19295 PF00975 Thioesterase domain CCY86_RS19295 PF00668 Condensation domain CCY86_RS19295 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS19295 PF00501 AMP-binding enzyme CCY86_RS19295 PF00550 Phosphopantetheine attachment site CCY86_RS19310 PF01037 Lrp/AsnC ligand binding domain CCY86_RS19315 PF00291 Pyridoxal-phosphate dependent enzyme CCY86_RS19320 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS19325 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS19330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CCY86_RS19330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CCY86_RS19335 PF00171 Aldehyde dehydrogenase family CCY86_RS19340 PF00501 AMP-binding enzyme CCY86_RS19340 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS19345 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS19345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS19345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS19350 PF12833 Helix-turn-helix domain CCY86_RS19350 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CCY86_RS19355 PF05088 Bacterial NAD-glutamate dehydrogenase CCY86_RS19370 PF07690 Major Facilitator Superfamily CCY86_RS19375 PF01047 MarR family CCY86_RS19380 PF01544 CorA-like Mg2+ transporter protein CCY86_RS19385 PF13673 Acetyltransferase (GNAT) domain CCY86_RS19385 PF13302 Acetyltransferase (GNAT) domain CCY86_RS19385 PF03352 Methyladenine glycosylase CCY86_RS19385 PF00117 Glutamine amidotransferase class-I CCY86_RS19385 PF00958 GMP synthase C terminal domain CCY86_RS19390 PF07690 Major Facilitator Superfamily CCY86_RS19405 PF02321 Outer membrane efflux protein CCY86_RS19410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS19415 PF00873 AcrB/AcrD/AcrF family CCY86_RS19420 PF00378 Enoyl-CoA hydratase/isomerase CCY86_RS19430 PF03783 Curli production assembly/transport component CsgG CCY86_RS19440 PF05643 Putative bacterial lipoprotein (DUF799) CCY86_RS19445 PF01717 Cobalamin-independent synthase, Catalytic domain CCY86_RS19445 PF08267 Cobalamin-independent synthase, N-terminal domain CCY86_RS19450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS19450 PF03466 LysR substrate binding domain CCY86_RS19455 PF01243 Pyridoxamine 5'-phosphate oxidase CCY86_RS19455 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CCY86_RS19460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CCY86_RS19460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CCY86_RS19465 PF00218 Indole-3-glycerol phosphate synthase CCY86_RS19470 PF00591 Glycosyl transferase family, a/b domain CCY86_RS19470 PF02885 Glycosyl transferase family, helical bundle domain CCY86_RS19475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS19475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CCY86_RS19480 PF01168 Alanine racemase, N-terminal domain CCY86_RS19505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CCY86_RS19505 PF02770 Acyl-CoA dehydrogenase, middle domain CCY86_RS19505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CCY86_RS19525 PF04209 homogentisate 1,2-dioxygenase CCY86_RS19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS19530 PF03466 LysR substrate binding domain CCY86_RS19535 PF00472 RF-1 domain CCY86_RS19550 PF01494 FAD binding domain CCY86_RS19570 PF00005 ABC transporter CCY86_RS19570 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS19575 PF00005 ABC transporter CCY86_RS19585 PF00067 Cytochrome P450 CCY86_RS19590 PF00892 EamA-like transporter family CCY86_RS19610 PF01063 Amino-transferase class IV CCY86_RS19630 PF03150 Di-haem cytochrome c peroxidase CCY86_RS19660 PF01958 Domain of unknown function DUF108 CCY86_RS19660 PF03447 Homoserine dehydrogenase, NAD binding domain CCY86_RS19685 PF00982 Glycosyltransferase family 20 CCY86_RS19715 PF06715 Gp5 C-terminal repeat (3 copies) CCY86_RS19715 PF04717 Type VI secretion system, phage-baseplate injector CCY86_RS19725 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CCY86_RS19740 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CCY86_RS19745 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CCY86_RS19755 PF04965 Gene 25-like lysozyme CCY86_RS19760 PF05947 Type VI secretion system, TssF CCY86_RS19770 PF00004 ATPase family associated with various cellular activities (AAA) CCY86_RS19770 PF07724 AAA domain (Cdc48 subfamily) CCY86_RS19770 PF17871 AAA lid domain CCY86_RS19770 PF10431 C-terminal, D2-small domain, of ClpB protein CCY86_RS19775 PF06715 Gp5 C-terminal repeat (3 copies) CCY86_RS19775 PF04717 Type VI secretion system, phage-baseplate injector CCY86_RS19825 PF02638 Glycosyl hydrolase-like 10 CCY86_RS19835 PF13488 Glycine zipper CCY86_RS19835 PF00691 OmpA family CCY86_RS19845 PF06761 Intracellular multiplication and human macrophage-killing CCY86_RS19845 PF14331 ImcF-related N-terminal domain CCY86_RS19845 PF06744 Type VI secretion protein IcmF C-terminal CCY86_RS19915 PF00155 Aminotransferase class I and II CCY86_RS19920 PF03466 LysR substrate binding domain CCY86_RS19920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS19925 PF01118 Semialdehyde dehydrogenase, NAD binding domain CCY86_RS19940 PF14579 Helix-hairpin-helix motif CCY86_RS19940 PF02811 PHP domain CCY86_RS19940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CCY86_RS19940 PF07733 Bacterial DNA polymerase III alpha NTPase domain CCY86_RS19945 PF01381 Helix-turn-helix CCY86_RS19950 PF03600 Citrate transporter CCY86_RS19965 PF00009 Elongation factor Tu GTP binding domain CCY86_RS19965 PF03764 Elongation factor G, domain IV CCY86_RS19965 PF14492 Elongation Factor G, domain II CCY86_RS19965 PF00679 Elongation factor G C-terminus CCY86_RS19965 PF03144 Elongation factor Tu domain 2 CCY86_RS19970 PF13545 Crp-like helix-turn-helix domain CCY86_RS19970 PF00027 Cyclic nucleotide-binding domain CCY86_RS19980 PF11953 Domain of unknown function (DUF3470) CCY86_RS19980 PF00037 4Fe-4S binding domain CCY86_RS19990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS19990 PF03466 LysR substrate binding domain CCY86_RS19995 PF00005 ABC transporter CCY86_RS19995 PF08402 TOBE domain CCY86_RS20000 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS20020 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CCY86_RS20020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CCY86_RS20025 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS20025 PF00593 TonB dependent receptor CCY86_RS20035 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS20035 PF00563 EAL domain CCY86_RS20035 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS20045 PF06039 Malate:quinone oxidoreductase (Mqo) CCY86_RS20060 PF00440 Bacterial regulatory proteins, tetR family CCY86_RS20065 PF02321 Outer membrane efflux protein CCY86_RS20070 PF00873 AcrB/AcrD/AcrF family CCY86_RS20075 PF00529 HlyD membrane-fusion protein of T1SS CCY86_RS20075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS20080 PF00892 EamA-like transporter family CCY86_RS20095 PF03466 LysR substrate binding domain CCY86_RS20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS20100 PF01402 Ribbon-helix-helix protein, copG family CCY86_RS20115 PF00701 Dihydrodipicolinate synthetase family CCY86_RS20120 PF00171 Aldehyde dehydrogenase family CCY86_RS20125 PF07690 Major Facilitator Superfamily CCY86_RS20130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CCY86_RS20130 PF13378 Enolase C-terminal domain-like CCY86_RS20135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CCY86_RS20135 PF08666 SAF domain CCY86_RS20140 PF01370 NAD dependent epimerase/dehydratase family CCY86_RS20145 PF08450 SMP-30/Gluconolactonase/LRE-like region CCY86_RS20150 PF00295 Glycosyl hydrolases family 28 CCY86_RS20155 PF07690 Major Facilitator Superfamily CCY86_RS20160 PF01467 Cytidylyltransferase-like CCY86_RS20160 PF00293 NUDIX domain CCY86_RS20190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS20190 PF01464 Transglycosylase SLT domain CCY86_RS20235 PF08281 Sigma-70, region 4 CCY86_RS20235 PF04542 Sigma-70 region 2 CCY86_RS20245 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS20245 PF00072 Response regulator receiver domain CCY86_RS20250 PF00072 Response regulator receiver domain CCY86_RS20250 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS20285 PF01313 Bacterial export proteins, family 3 CCY86_RS20290 PF00813 FliP family CCY86_RS20300 PF09483 Type III secretion protein (HpaP) CCY86_RS20305 PF00771 FHIPEP family CCY86_RS20310 PF01312 FlhB HrpN YscU SpaS Family CCY86_RS20325 PF01514 Secretory protein of YscJ/FliF family CCY86_RS20340 PF18269 T3SS EscN ATPase C-terminal domain CCY86_RS20340 PF02874 ATP synthase alpha/beta family, beta-barrel domain CCY86_RS20340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CCY86_RS20355 PF12833 Helix-turn-helix domain CCY86_RS20360 PF00263 Bacterial type II and III secretion system protein CCY86_RS20360 PF03958 Bacterial type II/III secretion system short domain CCY86_RS20365 PF13855 Leucine rich repeat CCY86_RS20400 PF03466 LysR substrate binding domain CCY86_RS20400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS20415 PF03466 LysR substrate binding domain CCY86_RS20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS20430 PF00295 Glycosyl hydrolases family 28 CCY86_RS20450 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CCY86_RS20450 PF17854 FtsK alpha domain CCY86_RS20450 PF09397 Ftsk gamma domain CCY86_RS20450 PF01580 FtsK/SpoIIIE family CCY86_RS20460 PF00120 Glutamine synthetase, catalytic domain CCY86_RS20460 PF03951 Glutamine synthetase, beta-Grasp domain CCY86_RS20465 PF01370 NAD dependent epimerase/dehydratase family CCY86_RS20470 PF00155 Aminotransferase class I and II CCY86_RS20475 PF01381 Helix-turn-helix CCY86_RS20475 PF08671 Anti-repressor SinI CCY86_RS20495 PF13609 Gram-negative porin CCY86_RS20500 PF02233 NAD(P) transhydrogenase beta subunit CCY86_RS20505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CCY86_RS20510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CCY86_RS20510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CCY86_RS20515 PF08240 Alcohol dehydrogenase GroES-like domain CCY86_RS20515 PF00107 Zinc-binding dehydrogenase CCY86_RS20530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CCY86_RS20530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS20535 PF03737 Aldolase/RraA CCY86_RS20540 PF00155 Aminotransferase class I and II CCY86_RS20545 PF03466 LysR substrate binding domain CCY86_RS20545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS20550 PF00364 Biotin-requiring enzyme CCY86_RS20555 PF02785 Biotin carboxylase C-terminal domain CCY86_RS20555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CCY86_RS20555 PF00289 Biotin carboxylase, N-terminal domain CCY86_RS20560 PF02682 Carboxyltransferase domain, subdomain C and D CCY86_RS20565 PF02626 Carboxyltransferase domain, subdomain A and B CCY86_RS20575 PF03746 LamB/YcsF family CCY86_RS20580 PF00106 short chain dehydrogenase CCY86_RS20585 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS20590 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS20595 PF00005 ABC transporter CCY86_RS20600 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS20610 PF02901 Pyruvate formate lyase-like CCY86_RS20610 PF01228 Glycine radical CCY86_RS20630 PF00589 Phage integrase family CCY86_RS20630 PF02899 Phage integrase, N-terminal SAM-like domain CCY86_RS20635 PF11339 Protein of unknown function (DUF3141) CCY86_RS20640 PF01515 Phosphate acetyl/butaryl transferase CCY86_RS20645 PF00871 Acetokinase family CCY86_RS20755 PF00654 Voltage gated chloride channel CCY86_RS20760 PF00578 AhpC/TSA family CCY86_RS20800 PF00501 AMP-binding enzyme CCY86_RS20800 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS20805 PF02515 CoA-transferase family III CCY86_RS20810 PF02597 ThiS family CCY86_RS20815 PF14464 Prokaryotic homologs of the JAB domain CCY86_RS20820 PF00581 Rhodanese-like domain CCY86_RS20820 PF00899 ThiF family CCY86_RS20835 PF13086 AAA domain CCY86_RS20835 PF13195 Protein of unknown function (DUF4011) CCY86_RS20835 PF13086 AAA domain CCY86_RS20835 PF13087 AAA domain CCY86_RS20835 PF13087 AAA domain CCY86_RS20835 PF13195 Protein of unknown function (DUF4011) CCY86_RS20840 PF17755 UvrA DNA-binding domain CCY86_RS20840 PF00005 ABC transporter CCY86_RS20840 PF17760 UvrA interaction domain CCY86_RS20870 PF02719 Polysaccharide biosynthesis protein CCY86_RS20885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CCY86_RS20890 PF17836 PglD N-terminal domain CCY86_RS20890 PF00132 Bacterial transferase hexapeptide (six repeats) CCY86_RS20890 PF14602 Hexapeptide repeat of succinyl-transferase CCY86_RS20895 PF02397 Bacterial sugar transferase CCY86_RS20910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCY86_RS20910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCY86_RS20915 PF14602 Hexapeptide repeat of succinyl-transferase CCY86_RS20915 PF12464 Maltose acetyltransferase CCY86_RS20935 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CCY86_RS20935 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CCY86_RS20935 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CCY86_RS20940 PF02350 UDP-N-acetylglucosamine 2-epimerase CCY86_RS20945 PF13807 G-rich domain on putative tyrosine kinase CCY86_RS20945 PF13614 AAA domain CCY86_RS20945 PF02706 Chain length determinant protein CCY86_RS20950 PF01451 Low molecular weight phosphotyrosine protein phosphatase CCY86_RS20955 PF02563 Polysaccharide biosynthesis/export protein CCY86_RS20955 PF10531 SLBB domain CCY86_RS21000 PF00005 ABC transporter CCY86_RS21000 PF00664 ABC transporter transmembrane region CCY86_RS21005 PF00005 ABC transporter CCY86_RS21005 PF08021 Siderophore-interacting FAD-binding domain CCY86_RS21005 PF00664 ABC transporter transmembrane region CCY86_RS21005 PF04954 Siderophore-interacting protein CCY86_RS21010 PF00593 TonB dependent receptor CCY86_RS21010 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS21025 PF00501 AMP-binding enzyme CCY86_RS21025 PF00668 Condensation domain CCY86_RS21025 PF08242 Methyltransferase domain CCY86_RS21025 PF00550 Phosphopantetheine attachment site CCY86_RS21035 PF00668 Condensation domain CCY86_RS21035 PF16197 Ketoacyl-synthetase C-terminal extension CCY86_RS21035 PF00109 Beta-ketoacyl synthase, N-terminal domain CCY86_RS21035 PF02801 Beta-ketoacyl synthase, C-terminal domain CCY86_RS21035 PF00550 Phosphopantetheine attachment site CCY86_RS21035 PF00698 Acyl transferase domain CCY86_RS21045 PF00975 Thioesterase domain CCY86_RS21050 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS21050 PF00501 AMP-binding enzyme CCY86_RS21060 PF02203 Tar ligand binding domain homologue CCY86_RS21060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS21060 PF00672 HAMP domain CCY86_RS21085 PF00171 Aldehyde dehydrogenase family CCY86_RS21090 PF00180 Isocitrate/isopropylmalate dehydrogenase CCY86_RS21095 PF00005 ABC transporter CCY86_RS21095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CCY86_RS21100 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS21100 PF12911 N-terminal TM domain of oligopeptide transport permease C CCY86_RS21105 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS21110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CCY86_RS21115 PF01266 FAD dependent oxidoreductase CCY86_RS21125 PF00171 Aldehyde dehydrogenase family CCY86_RS21135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CCY86_RS21140 PF00202 Aminotransferase class-III CCY86_RS21145 PF01037 Lrp/AsnC ligand binding domain CCY86_RS21155 PF04324 BFD-like [2Fe-2S] binding domain CCY86_RS21155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS21160 PF01266 FAD dependent oxidoreductase CCY86_RS21180 PF01546 Peptidase family M20/M25/M40 CCY86_RS21180 PF07687 Peptidase dimerisation domain CCY86_RS21190 PF08379 Bacterial transglutaminase-like N-terminal region CCY86_RS21190 PF01841 Transglutaminase-like superfamily CCY86_RS21195 PF04168 A predicted alpha-helical domain with a conserved ER motif. CCY86_RS21195 PF14403 Circularly permuted ATP-grasp type 2 CCY86_RS21205 PF15887 Putative zinc-binding metallo-peptidase CCY86_RS21205 PF10005 zinc-ribbon domain CCY86_RS21210 PF03466 LysR substrate binding domain CCY86_RS21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS21225 PF05114 Protein of unknown function (DUF692) CCY86_RS21255 PF00873 AcrB/AcrD/AcrF family CCY86_RS21275 PF07690 Major Facilitator Superfamily CCY86_RS21280 PF00384 Molybdopterin oxidoreductase CCY86_RS21290 PF02634 FdhD/NarQ family CCY86_RS21295 PF00563 EAL domain CCY86_RS21295 PF13188 PAS domain CCY86_RS21295 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS21295 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS21300 PF02705 K+ potassium transporter CCY86_RS21305 PF00313 'Cold-shock' DNA-binding domain CCY86_RS21315 PF00171 Aldehyde dehydrogenase family CCY86_RS21320 PF00202 Aminotransferase class-III CCY86_RS21325 PF00155 Aminotransferase class I and II CCY86_RS21325 PF00392 Bacterial regulatory proteins, gntR family CCY86_RS21335 PF06314 Acetoacetate decarboxylase (ADC) CCY86_RS21365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCY86_RS21365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCY86_RS21370 PF00593 TonB dependent receptor CCY86_RS21370 PF07715 TonB-dependent Receptor Plug Domain CCY86_RS21375 PF00294 pfkB family carbohydrate kinase CCY86_RS21385 PF00381 PTS HPr component phosphorylation site CCY86_RS21385 PF02896 PEP-utilising enzyme, TIM barrel domain CCY86_RS21385 PF00391 PEP-utilising enzyme, mobile domain CCY86_RS21385 PF05524 PEP-utilising enzyme, N-terminal CCY86_RS21385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CCY86_RS21390 PF02264 LamB porin CCY86_RS21395 PF00251 Glycosyl hydrolases family 32 N-terminal domain CCY86_RS21395 PF08244 Glycosyl hydrolases family 32 C terminal CCY86_RS21400 PF02378 Phosphotransferase system, EIIC CCY86_RS21400 PF00367 phosphotransferase system, EIIB CCY86_RS21405 PF00356 Bacterial regulatory proteins, lacI family CCY86_RS21420 PF13411 MerR HTH family regulatory protein CCY86_RS21490 PF13332 Hemagglutinin repeat CCY86_RS21490 PF04829 Pre-toxin domain with VENN motif CCY86_RS21490 PF13018 Extended Signal Peptide of Type V secretion system CCY86_RS21490 PF05860 haemagglutination activity domain CCY86_RS21495 PF02794 RTX toxin acyltransferase family CCY86_RS21500 PF08479 POTRA domain, ShlB-type CCY86_RS21500 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CCY86_RS21500 PF17287 POTRA domain CCY86_RS21510 PF00067 Cytochrome P450 CCY86_RS21520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CCY86_RS21520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CCY86_RS21535 PF02954 Bacterial regulatory protein, Fis family CCY86_RS21535 PF00158 Sigma-54 interaction domain CCY86_RS21535 PF00072 Response regulator receiver domain CCY86_RS21565 PF00437 Type II/IV secretion system protein CCY86_RS21575 PF04972 BON domain CCY86_RS21575 PF00263 Bacterial type II and III secretion system protein CCY86_RS21575 PF13629 Pilus formation protein N terminal region CCY86_RS21615 PF00072 Response regulator receiver domain CCY86_RS21615 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS21625 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS21625 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS21625 PF00563 EAL domain CCY86_RS21640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS21640 PF08269 Cache domain CCY86_RS21650 PF16363 GDP-mannose 4,6 dehydratase CCY86_RS21655 PF00589 Phage integrase family CCY86_RS21655 PF02899 Phage integrase, N-terminal SAM-like domain CCY86_RS21660 PF02358 Trehalose-phosphatase CCY86_RS21665 PF00982 Glycosyltransferase family 20 CCY86_RS21670 PF01047 MarR family CCY86_RS21675 PF02566 OsmC-like protein CCY86_RS21680 PF07859 alpha/beta hydrolase fold CCY86_RS21690 PF13406 Transglycosylase SLT domain CCY86_RS21695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS21695 PF03466 LysR substrate binding domain CCY86_RS21700 PF07859 alpha/beta hydrolase fold CCY86_RS21705 PF13533 Biotin-lipoyl like CCY86_RS21710 PF00873 AcrB/AcrD/AcrF family CCY86_RS21715 PF02321 Outer membrane efflux protein CCY86_RS21720 PF01810 LysE type translocator CCY86_RS21725 PF03466 LysR substrate binding domain CCY86_RS21725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS21735 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS21740 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS21740 PF00072 Response regulator receiver domain CCY86_RS21750 PF04960 Glutaminase CCY86_RS21755 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS21760 PF00005 ABC transporter CCY86_RS21760 PF08402 TOBE domain CCY86_RS21765 PF03459 TOBE domain CCY86_RS21765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS21800 PF06906 Protein of unknown function (DUF1272) CCY86_RS21820 PF00072 Response regulator receiver domain CCY86_RS21820 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS21825 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS21825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS21825 PF00672 HAMP domain CCY86_RS21850 PF03741 Integral membrane protein TerC family CCY86_RS21850 PF03471 Transporter associated domain CCY86_RS21855 PF03150 Di-haem cytochrome c peroxidase CCY86_RS21855 PF00034 Cytochrome c CCY86_RS21860 PF04185 Phosphoesterase family CCY86_RS21895 PF00072 Response regulator receiver domain CCY86_RS21895 PF01627 Hpt domain CCY86_RS21895 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS21895 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS21895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS21895 PF00989 PAS fold CCY86_RS21930 PF01418 Helix-turn-helix domain, rpiR family CCY86_RS21930 PF01380 SIS domain CCY86_RS21930 PF02685 Glucokinase CCY86_RS21935 PF07969 Amidohydrolase family CCY86_RS21940 PF01042 Endoribonuclease L-PSP CCY86_RS21945 PF02447 GntP family permease CCY86_RS21950 PF01081 KDPG and KHG aldolase CCY86_RS21955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CCY86_RS21960 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS21960 PF00072 Response regulator receiver domain CCY86_RS21965 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CCY86_RS21975 PF00672 HAMP domain CCY86_RS21975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS21975 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS21980 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS21980 PF00072 Response regulator receiver domain CCY86_RS21985 PF13533 Biotin-lipoyl like CCY86_RS21990 PF00873 AcrB/AcrD/AcrF family CCY86_RS21995 PF00873 AcrB/AcrD/AcrF family CCY86_RS22000 PF02321 Outer membrane efflux protein CCY86_RS22015 PF00563 EAL domain CCY86_RS22015 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS22015 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS22035 PF02322 Cytochrome bd terminal oxidase subunit II CCY86_RS22040 PF01654 Cytochrome bd terminal oxidase subunit I CCY86_RS22045 PF00990 Diguanylate cyclase, GGDEF domain CCY86_RS22045 PF03707 Bacterial signalling protein N terminal repeat CCY86_RS22045 PF13188 PAS domain CCY86_RS22045 PF00563 EAL domain CCY86_RS22050 PF00672 HAMP domain CCY86_RS22050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS22050 PF02203 Tar ligand binding domain homologue CCY86_RS22060 PF13091 PLD-like domain CCY86_RS22060 PF13396 Phospholipase_D-nuclease N-terminal CCY86_RS22075 PF17102 Stealth protein CR3, conserved region 3 CCY86_RS22075 PF17101 Stealth protein CR1, conserved region 1 CCY86_RS22075 PF17103 Stealth protein CR4, conserved region 4 CCY86_RS22075 PF11380 Stealth protein CR2, conserved region 2 CCY86_RS22080 PF01554 MatE CCY86_RS22110 PF17287 POTRA domain CCY86_RS22110 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CCY86_RS22110 PF08479 POTRA domain, ShlB-type CCY86_RS22130 PF05594 Haemagluttinin repeat CCY86_RS22130 PF13018 Extended Signal Peptide of Type V secretion system CCY86_RS22130 PF13332 Hemagglutinin repeat CCY86_RS22130 PF05860 haemagglutination activity domain CCY86_RS22130 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CCY86_RS22135 PF00384 Molybdopterin oxidoreductase CCY86_RS22135 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CCY86_RS22135 PF01568 Molydopterin dinucleotide binding domain CCY86_RS22135 PF04324 BFD-like [2Fe-2S] binding domain CCY86_RS22140 PF04324 BFD-like [2Fe-2S] binding domain CCY86_RS22140 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCY86_RS22140 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCY86_RS22140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS22140 PF18267 Rubredoxin NAD+ reductase C-terminal domain CCY86_RS22145 PF13806 Rieske-like [2Fe-2S] domain CCY86_RS22150 PF07992 Pyridine nucleotide-disulphide oxidoreductase CCY86_RS22150 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CCY86_RS22150 PF18267 Rubredoxin NAD+ reductase C-terminal domain CCY86_RS22150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CCY86_RS22150 PF04324 BFD-like [2Fe-2S] binding domain CCY86_RS22160 PF08447 PAS fold CCY86_RS22160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS22175 PF00296 Luciferase-like monooxygenase CCY86_RS22190 PF08386 TAP-like protein CCY86_RS22190 PF00561 alpha/beta hydrolase fold CCY86_RS22205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CCY86_RS22210 PF03737 Aldolase/RraA CCY86_RS22215 PF00155 Aminotransferase class I and II CCY86_RS22220 PF00180 Isocitrate/isopropylmalate dehydrogenase CCY86_RS22220 PF03737 Aldolase/RraA CCY86_RS22230 PF03466 LysR substrate binding domain CCY86_RS22230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS22250 PF01872 RibD C-terminal domain CCY86_RS22255 PF00925 GTP cyclohydrolase II CCY86_RS22270 PF00701 Dihydrodipicolinate synthetase family CCY86_RS22275 PF00465 Iron-containing alcohol dehydrogenase CCY86_RS22280 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CCY86_RS22305 PF00202 Aminotransferase class-III CCY86_RS22325 PF07690 Major Facilitator Superfamily CCY86_RS22330 PF00206 Lyase CCY86_RS22330 PF10415 Fumarase C C-terminus CCY86_RS22335 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS22335 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CCY86_RS22340 PF05567 Neisseria PilC beta-propeller domain CCY86_RS22360 PF07963 Prokaryotic N-terminal methylation motif CCY86_RS22360 PF00114 Pilin (bacterial filament) CCY86_RS22365 PF02675 S-adenosylmethionine decarboxylase CCY86_RS22385 PF03994 Domain of Unknown Function (DUF350) CCY86_RS22390 PF13458 Periplasmic binding protein CCY86_RS22405 PF00005 ABC transporter CCY86_RS22405 PF12399 Branched-chain amino acid ATP-binding cassette transporter CCY86_RS22410 PF00005 ABC transporter CCY86_RS22425 PF01738 Dienelactone hydrolase family CCY86_RS22485 PF01810 LysE type translocator CCY86_RS22490 PF01037 Lrp/AsnC ligand binding domain CCY86_RS22520 PF01176 Translation initiation factor 1A / IF-1 CCY86_RS22545 PF00034 Cytochrome c CCY86_RS22555 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCY86_RS22565 PF00561 alpha/beta hydrolase fold CCY86_RS22605 PF01654 Cytochrome bd terminal oxidase subunit I CCY86_RS22610 PF02322 Cytochrome bd terminal oxidase subunit II CCY86_RS22615 PF02558 Ketopantoate reductase PanE/ApbA CCY86_RS22615 PF08546 Ketopantoate reductase PanE/ApbA C terminal CCY86_RS22625 PF01042 Endoribonuclease L-PSP CCY86_RS22630 PF12833 Helix-turn-helix domain CCY86_RS22660 PF07804 HipA-like C-terminal domain CCY86_RS22660 PF13657 HipA N-terminal domain CCY86_RS22670 PF07690 Major Facilitator Superfamily CCY86_RS22675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS22675 PF03466 LysR substrate binding domain CCY86_RS22680 PF02525 Flavodoxin-like fold CCY86_RS22700 PF00890 FAD binding domain CCY86_RS22700 PF02910 Fumarate reductase flavoprotein C-term CCY86_RS22705 PF01925 Sulfite exporter TauE/SafE CCY86_RS22710 PF13193 AMP-binding enzyme C-terminal domain CCY86_RS22710 PF00501 AMP-binding enzyme CCY86_RS22720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS22720 PF03466 LysR substrate binding domain CCY86_RS22725 PF01925 Sulfite exporter TauE/SafE CCY86_RS22755 PF05552 Conserved TM helix CCY86_RS22760 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CCY86_RS22765 PF13361 UvrD-like helicase C-terminal domain CCY86_RS22765 PF00580 UvrD/REP helicase N-terminal domain CCY86_RS22830 PF02581 Thiamine monophosphate synthase CCY86_RS22835 PF00083 Sugar (and other) transporter CCY86_RS22835 PF07690 Major Facilitator Superfamily CCY86_RS22840 PF00465 Iron-containing alcohol dehydrogenase CCY86_RS22845 PF17820 PDZ domain CCY86_RS22845 PF13180 PDZ domain CCY86_RS22850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS22850 PF08521 Two-component sensor kinase N-terminal CCY86_RS22850 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS22855 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS22855 PF00072 Response regulator receiver domain CCY86_RS22860 PF05819 NolX protein CCY86_RS22865 PF02685 Glucokinase CCY86_RS22865 PF01380 SIS domain CCY86_RS22865 PF01418 Helix-turn-helix domain, rpiR family CCY86_RS22870 PF02685 Glucokinase CCY86_RS22875 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CCY86_RS22880 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CCY86_RS22880 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CCY86_RS22885 PF00920 Dehydratase family CCY86_RS22905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CCY86_RS22910 PF00115 Cytochrome C and Quinol oxidase polypeptide I CCY86_RS22920 PF00510 Cytochrome c oxidase subunit III CCY86_RS22930 PF05819 NolX protein CCY86_RS22955 PF07690 Major Facilitator Superfamily CCY86_RS22965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS22965 PF03466 LysR substrate binding domain CCY86_RS22970 PF00497 Bacterial extracellular solute-binding proteins, family 3 CCY86_RS22980 PF00528 Binding-protein-dependent transport system inner membrane component CCY86_RS22985 PF00491 Arginase family CCY86_RS22990 PF03472 Autoinducer binding domain CCY86_RS22990 PF00196 Bacterial regulatory proteins, luxR family CCY86_RS23005 PF06628 Catalase-related immune-responsive CCY86_RS23005 PF00199 Catalase CCY86_RS23010 PF01053 Cys/Met metabolism PLP-dependent enzyme CCY86_RS23015 PF05690 Thiazole biosynthesis protein ThiG CCY86_RS23015 PF01266 FAD dependent oxidoreductase CCY86_RS23020 PF00171 Aldehyde dehydrogenase family CCY86_RS23025 PF13458 Periplasmic binding protein CCY86_RS23030 PF03466 LysR substrate binding domain CCY86_RS23030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS23035 PF13609 Gram-negative porin CCY86_RS23040 PF07690 Major Facilitator Superfamily CCY86_RS23045 PF00873 AcrB/AcrD/AcrF family CCY86_RS23050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS23055 PF02321 Outer membrane efflux protein CCY86_RS23115 PF00171 Aldehyde dehydrogenase family CCY86_RS23120 PF00180 Isocitrate/isopropylmalate dehydrogenase CCY86_RS23125 PF03328 HpcH/HpaI aldolase/citrate lyase family CCY86_RS23130 PF07690 Major Facilitator Superfamily CCY86_RS23135 PF08666 SAF domain CCY86_RS23135 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CCY86_RS23140 PF00356 Bacterial regulatory proteins, lacI family CCY86_RS23145 PF02195 ParB-like nuclease domain CCY86_RS23155 PF01507 Phosphoadenosine phosphosulfate reductase family CCY86_RS23155 PF11922 Domain of unknown function (DUF3440) CCY86_RS23175 PF04344 Chemotaxis phosphatase, CheZ CCY86_RS23180 PF00072 Response regulator receiver domain CCY86_RS23185 PF01339 CheB methylesterase CCY86_RS23185 PF00072 Response regulator receiver domain CCY86_RS23190 PF03975 CheD chemotactic sensory transduction CCY86_RS23195 PF01739 CheR methyltransferase, SAM binding domain CCY86_RS23195 PF03705 CheR methyltransferase, all-alpha domain CCY86_RS23200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CCY86_RS23200 PF00672 HAMP domain CCY86_RS23200 PF02203 Tar ligand binding domain homologue CCY86_RS23205 PF01584 CheW-like domain CCY86_RS23210 PF01627 Hpt domain CCY86_RS23210 PF02895 Signal transducing histidine kinase, homodimeric domain CCY86_RS23210 PF09078 CheY binding CCY86_RS23210 PF01584 CheW-like domain CCY86_RS23210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS23215 PF00072 Response regulator receiver domain CCY86_RS23220 PF00691 OmpA family CCY86_RS23220 PF13677 Membrane MotB of proton-channel complex MotA/MotB CCY86_RS23225 PF01618 MotA/TolQ/ExbB proton channel family CCY86_RS23230 PF05280 Flagellar transcriptional activator (FlhC) CCY86_RS23235 PF05247 Flagellar transcriptional activator (FlhD) CCY86_RS23255 PF02515 CoA-transferase family III CCY86_RS23260 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CCY86_RS23260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CCY86_RS23265 PF07690 Major Facilitator Superfamily CCY86_RS23270 PF03466 LysR substrate binding domain CCY86_RS23270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS23275 PF04303 PrpF protein CCY86_RS23280 PF04909 Amidohydrolase CCY86_RS23285 PF03737 Aldolase/RraA CCY86_RS23290 PF13609 Gram-negative porin CCY86_RS23300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS23300 PF00672 HAMP domain CCY86_RS23300 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS23305 PF00072 Response regulator receiver domain CCY86_RS23305 PF00486 Transcriptional regulatory protein, C terminal CCY86_RS23340 PF13145 PPIC-type PPIASE domain CCY86_RS23345 PF08479 POTRA domain, ShlB-type CCY86_RS23345 PF17287 POTRA domain CCY86_RS23345 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CCY86_RS23350 PF05860 haemagglutination activity domain CCY86_RS23350 PF13332 Hemagglutinin repeat CCY86_RS23350 PF05594 Haemagluttinin repeat CCY86_RS23350 PF13018 Extended Signal Peptide of Type V secretion system CCY86_RS23405 PF01850 PIN domain CCY86_RS23435 PF00816 H-NS histone family CCY86_RS23600 PF01555 DNA methylase CCY86_RS23605 PF18755 Restriction Enzyme Adenine Methylase Associated CCY86_RS23605 PF01555 DNA methylase CCY86_RS23675 PF00892 EamA-like transporter family CCY86_RS23680 PF03466 LysR substrate binding domain CCY86_RS23680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS23705 PF00553 Cellulose binding domain CCY86_RS23705 PF00041 Fibronectin type III domain CCY86_RS23705 PF01341 Glycosyl hydrolases family 6 CCY86_RS23755 PF08241 Methyltransferase domain CCY86_RS23760 PF00266 Aminotransferase class-V CCY86_RS23785 PF02560 Cyanate lyase C-terminal domain CCY86_RS23790 PF04966 Carbohydrate-selective porin, OprB family CCY86_RS23795 PF13407 Periplasmic binding protein domain CCY86_RS23800 PF00005 ABC transporter CCY86_RS23805 PF02653 Branched-chain amino acid transport system / permease component CCY86_RS23810 PF01370 NAD dependent epimerase/dehydratase family CCY86_RS23815 PF00356 Bacterial regulatory proteins, lacI family CCY86_RS23835 PF00106 short chain dehydrogenase CCY86_RS23845 PF03466 LysR substrate binding domain CCY86_RS23845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CCY86_RS23875 PF02673 Bacitracin resistance protein BacA CCY86_RS23890 PF00529 HlyD membrane-fusion protein of T1SS CCY86_RS23890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CCY86_RS23895 PF00873 AcrB/AcrD/AcrF family CCY86_RS23915 PF03929 PepSY-associated TM region CCY86_RS23940 PF01965 DJ-1/PfpI family CCY86_RS23940 PF12833 Helix-turn-helix domain CCY86_RS23945 PF01965 DJ-1/PfpI family CCY86_RS23950 PF01739 CheR methyltransferase, SAM binding domain CCY86_RS23965 PF08281 Sigma-70, region 4 CCY86_RS23965 PF04542 Sigma-70 region 2 CCY86_RS23995 PF00009 Elongation factor Tu GTP binding domain CCY86_RS23995 PF03144 Elongation factor Tu domain 2 CCY86_RS23995 PF16658 Class II release factor RF3, C-terminal domain CCY86_RS24020 PF07043 Protein of unknown function (DUF1328) CCY86_RS24025 PF02954 Bacterial regulatory protein, Fis family CCY86_RS24025 PF00072 Response regulator receiver domain CCY86_RS24025 PF00158 Sigma-54 interaction domain CCY86_RS24030 PF01590 GAF domain CCY86_RS24030 PF00158 Sigma-54 interaction domain CCY86_RS24030 PF02954 Bacterial regulatory protein, Fis family CCY86_RS24040 PF04552 Sigma-54, DNA binding domain CCY86_RS24040 PF04963 Sigma-54 factor, core binding domain CCY86_RS24040 PF00309 Sigma-54 factor, Activator interacting domain (AID) CCY86_RS24060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CCY86_RS24060 PF00512 His Kinase A (phospho-acceptor) domain CCY86_RS24070 PF00860 Permease family