locus-tag class description CJO92_RS00005 PF11638 DnaA N-terminal domain CJO92_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CJO92_RS00005 PF00308 Bacterial dnaA protein CJO92_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CJO92_RS00010 PF02767 DNA polymerase III beta subunit, central domain CJO92_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CJO92_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CJO92_RS00015 PF18053 DNA gyrase B subunit insert domain CJO92_RS00015 PF01751 Toprim domain CJO92_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS00015 PF00204 DNA gyrase B CJO92_RS00025 PF04539 Sigma-70 region 3 CJO92_RS00025 PF04545 Sigma-70, region 4 CJO92_RS00025 PF04542 Sigma-70 region 2 CJO92_RS00025 PF00140 Sigma-70 factor, region 1.2 CJO92_RS00030 PF08676 MutL C terminal dimerisation domain CJO92_RS00030 PF01119 DNA mismatch repair protein, C-terminal domain CJO92_RS00050 PF03852 DNA mismatch endonuclease Vsr CJO92_RS00055 PF00145 C-5 cytosine-specific DNA methylase CJO92_RS00070 PF06715 Gp5 C-terminal repeat (3 copies) CJO92_RS00070 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS00130 PF01062 Bestrophin, RFP-TM, chloride channel CJO92_RS00135 PF00672 HAMP domain CJO92_RS00135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS00135 PF02203 Tar ligand binding domain homologue CJO92_RS00145 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS00155 PF00005 ABC transporter CJO92_RS00160 PF01266 FAD dependent oxidoreductase CJO92_RS00180 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS00180 PF00072 Response regulator receiver domain CJO92_RS00185 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS00185 PF08521 Two-component sensor kinase N-terminal CJO92_RS00195 PF07690 Major Facilitator Superfamily CJO92_RS00200 PF00970 Oxidoreductase FAD-binding domain CJO92_RS00200 PF00042 Globin CJO92_RS00200 PF00175 Oxidoreductase NAD-binding domain CJO92_RS00205 PF02082 Transcriptional regulator CJO92_RS00210 PF02384 N-6 DNA Methylase CJO92_RS00210 PF12161 HsdM N-terminal domain CJO92_RS00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS00225 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS00230 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS00230 PF00072 Response regulator receiver domain CJO92_RS00250 PF00857 Isochorismatase family CJO92_RS00255 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS00255 PF00072 Response regulator receiver domain CJO92_RS00260 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS00260 PF00360 Phytochrome region CJO92_RS00260 PF01590 GAF domain CJO92_RS00260 PF00563 EAL domain CJO92_RS00265 PF03180 NLPA lipoprotein CJO92_RS00270 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS00270 PF02702 Osmosensitive K+ channel His kinase sensor domain CJO92_RS00270 PF13492 GAF domain CJO92_RS00270 PF13493 Domain of unknown function (DUF4118) CJO92_RS00270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS00275 PF02669 K+-transporting ATPase, c chain CJO92_RS00285 PF03814 Potassium-transporting ATPase A subunit CJO92_RS00300 PF01048 Phosphorylase superfamily CJO92_RS00315 PF00005 ABC transporter CJO92_RS00325 PF00708 Acylphosphatase CJO92_RS00335 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJO92_RS00345 PF03776 Septum formation topological specificity factor MinE CJO92_RS00350 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO92_RS00355 PF05209 Septum formation inhibitor MinC, N-terminal domain CJO92_RS00355 PF03775 Septum formation inhibitor MinC, C-terminal domain CJO92_RS00360 PF02872 5'-nucleotidase, C-terminal domain CJO92_RS00360 PF00149 Calcineurin-like phosphoesterase CJO92_RS00370 PF02558 Ketopantoate reductase PanE/ApbA CJO92_RS00370 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJO92_RS00380 PF00216 Bacterial DNA-binding protein CJO92_RS00390 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS00390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS00390 PF08521 Two-component sensor kinase N-terminal CJO92_RS00395 PF00072 Response regulator receiver domain CJO92_RS00395 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS00405 PF01329 Pterin 4 alpha carbinolamine dehydratase CJO92_RS00410 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CJO92_RS00415 PF01037 Lrp/AsnC ligand binding domain CJO92_RS00420 PF07947 YhhN family CJO92_RS00425 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJO92_RS00430 PF03922 OmpW family CJO92_RS00440 PF00403 Heavy-metal-associated domain CJO92_RS00445 PF09278 MerR, DNA binding CJO92_RS00445 PF00376 MerR family regulatory protein CJO92_RS00450 PF12147 Putative methyltransferase CJO92_RS00450 PF12146 Serine aminopeptidase, S33 CJO92_RS00455 PF05199 GMC oxidoreductase CJO92_RS00455 PF00732 GMC oxidoreductase CJO92_RS00460 PF00005 ABC transporter CJO92_RS00460 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS00465 PF00005 ABC transporter CJO92_RS00475 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS00495 PF01925 Sulfite exporter TauE/SafE CJO92_RS00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS00510 PF03466 LysR substrate binding domain CJO92_RS00515 PF12843 Putative quorum-sensing-regulated virulence factor CJO92_RS00525 PF03466 LysR substrate binding domain CJO92_RS00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS00540 PF01134 Glucose inhibited division protein A CJO92_RS00540 PF13932 GidA associated domain CJO92_RS00545 PF02527 rRNA small subunit methyltransferase G CJO92_RS00550 PF13614 AAA domain CJO92_RS00555 PF17762 HTH domain found in ParB protein CJO92_RS00555 PF02195 ParB-like nuclease domain CJO92_RS00565 PF00119 ATP synthase A chain CJO92_RS00570 PF00137 ATP synthase subunit C CJO92_RS00575 PF00430 ATP synthase B/B' CF(0) CJO92_RS00580 PF00213 ATP synthase delta (OSCP) subunit CJO92_RS00585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO92_RS00585 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO92_RS00585 PF00306 ATP synthase alpha/beta chain, C terminal domain CJO92_RS00590 PF00231 ATP synthase CJO92_RS00595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO92_RS00595 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO92_RS00600 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJO92_RS00600 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJO92_RS00615 PF13380 CoA binding domain CJO92_RS00620 PF07859 alpha/beta hydrolase fold CJO92_RS00630 PF12849 PBP superfamily domain CJO92_RS00640 PF00672 HAMP domain CJO92_RS00640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS00660 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJO92_RS00665 PF17764 3′ DNA-binding domain (3′BD) CJO92_RS00665 PF00271 Helicase conserved C-terminal domain CJO92_RS00665 PF00270 DEAD/DEAH box helicase CJO92_RS00665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJO92_RS00665 PF18074 Primosomal protein N C-terminal domain CJO92_RS00670 PF00171 Aldehyde dehydrogenase family CJO92_RS00670 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJO92_RS00670 PF01619 Proline dehydrogenase CJO92_RS00670 PF14850 DNA-binding domain of Proline dehydrogenase CJO92_RS00675 PF13458 Periplasmic binding protein CJO92_RS00685 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJO92_RS00695 PF03169 OPT oligopeptide transporter protein CJO92_RS00705 PF03315 Serine dehydratase beta chain CJO92_RS00705 PF03313 Serine dehydratase alpha chain CJO92_RS00710 PF02347 Glycine cleavage system P-protein CJO92_RS00715 PF01597 Glycine cleavage H-protein CJO92_RS00720 PF01571 Aminomethyltransferase folate-binding domain CJO92_RS00720 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJO92_RS00735 PF00580 UvrD/REP helicase N-terminal domain CJO92_RS00735 PF13361 UvrD-like helicase C-terminal domain CJO92_RS00760 PF03472 Autoinducer binding domain CJO92_RS00760 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS00765 PF00765 Autoinducer synthase CJO92_RS00775 PF06969 HemN C-terminal domain CJO92_RS00775 PF04055 Radical SAM superfamily CJO92_RS00785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJO92_RS00785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJO92_RS00795 PF01261 Xylose isomerase-like TIM barrel CJO92_RS00800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO92_RS00800 PF00205 Thiamine pyrophosphate enzyme, central domain CJO92_RS00800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO92_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS00805 PF03466 LysR substrate binding domain CJO92_RS00820 PF01205 Uncharacterized protein family UPF0029 CJO92_RS00820 PF09186 Domain of unknown function (DUF1949) CJO92_RS00830 PF00375 Sodium:dicarboxylate symporter family CJO92_RS00835 PF03561 Allantoicase repeat CJO92_RS00840 PF04115 Ureidoglycolate lyase CJO92_RS00845 PF07687 Peptidase dimerisation domain CJO92_RS00845 PF01546 Peptidase family M20/M25/M40 CJO92_RS00870 PF00753 Metallo-beta-lactamase superfamily CJO92_RS00875 PF05036 Sporulation related domain CJO92_RS00875 PF03330 Lytic transglycolase CJO92_RS00880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS00885 PF02021 Uncharacterised protein family UPF0102 CJO92_RS00900 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJO92_RS00900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS00900 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding CJO92_RS00905 PF00892 EamA-like transporter family CJO92_RS00940 PF08534 Redoxin CJO92_RS00945 PF02872 5'-nucleotidase, C-terminal domain CJO92_RS00945 PF00149 Calcineurin-like phosphoesterase CJO92_RS00995 PF05175 Methyltransferase small domain CJO92_RS01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS01000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO92_RS01025 PF01638 HxlR-like helix-turn-helix CJO92_RS01045 PF00881 Nitroreductase family CJO92_RS01060 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS01060 PF00072 Response regulator receiver domain CJO92_RS01100 PF03279 Bacterial lipid A biosynthesis acyltransferase CJO92_RS01110 PF00295 Glycosyl hydrolases family 28 CJO92_RS01135 PF01381 Helix-turn-helix CJO92_RS01160 PF00563 EAL domain CJO92_RS01160 PF00360 Phytochrome region CJO92_RS01160 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS01160 PF01590 GAF domain CJO92_RS01175 PF13180 PDZ domain CJO92_RS01190 PF00106 short chain dehydrogenase CJO92_RS01200 PF00672 HAMP domain CJO92_RS01200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS01200 PF02203 Tar ligand binding domain homologue CJO92_RS01225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO92_RS01225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS01230 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS01230 PF00107 Zinc-binding dehydrogenase CJO92_RS01240 PF02954 Bacterial regulatory protein, Fis family CJO92_RS01240 PF01590 GAF domain CJO92_RS01240 PF00158 Sigma-54 interaction domain CJO92_RS01245 PF00171 Aldehyde dehydrogenase family CJO92_RS01250 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJO92_RS01255 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJO92_RS01260 PF00929 Exonuclease CJO92_RS01260 PF08411 Exonuclease C-terminal CJO92_RS01285 PF00155 Aminotransferase class I and II CJO92_RS01285 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS01305 PF00482 Type II secretion system (T2SS), protein F CJO92_RS01315 PF00437 Type II/IV secretion system protein CJO92_RS01320 PF03958 Bacterial type II/III secretion system short domain CJO92_RS01320 PF00263 Bacterial type II and III secretion system protein CJO92_RS01345 PF11612 Type II secretion system (T2SS), protein J CJO92_RS01345 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS01350 PF02501 Type II secretion system (T2SS), protein I CJO92_RS01350 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS01355 PF12019 Type II transport protein GspH CJO92_RS01355 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS01360 PF08334 Type II secretion system (T2SS), protein G CJO92_RS01360 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS01375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS01380 PF01037 Lrp/AsnC ligand binding domain CJO92_RS01390 PF12951 Passenger-associated-transport-repeat CJO92_RS01390 PF00082 Subtilase family CJO92_RS01390 PF03797 Autotransporter beta-domain CJO92_RS01410 PF02525 Flavodoxin-like fold CJO92_RS01415 PF02254 TrkA-N domain CJO92_RS01415 PF00999 Sodium/hydrogen exchanger family CJO92_RS01430 PF01546 Peptidase family M20/M25/M40 CJO92_RS01430 PF07687 Peptidase dimerisation domain CJO92_RS01440 PF13609 Gram-negative porin CJO92_RS01445 PF03401 Tripartite tricarboxylate transporter family receptor CJO92_RS01450 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS01450 PF00072 Response regulator receiver domain CJO92_RS01455 PF01355 High potential iron-sulfur protein CJO92_RS01465 PF09339 IclR helix-turn-helix domain CJO92_RS01465 PF01614 Bacterial transcriptional regulator CJO92_RS01470 PF07690 Major Facilitator Superfamily CJO92_RS01475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS01485 PF12697 Alpha/beta hydrolase family CJO92_RS01500 PF01037 Lrp/AsnC ligand binding domain CJO92_RS01515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO92_RS01530 PF00072 Response regulator receiver domain CJO92_RS01530 PF09456 RcsC Alpha-Beta-Loop (ABL) CJO92_RS01530 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS01535 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS01535 PF00072 Response regulator receiver domain CJO92_RS01540 PF16916 Dimerisation domain of Zinc Transporter CJO92_RS01540 PF01545 Cation efflux family CJO92_RS01575 PF07690 Major Facilitator Superfamily CJO92_RS01580 PF00924 Mechanosensitive ion channel CJO92_RS01595 PF00072 Response regulator receiver domain CJO92_RS01595 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS01600 PF00672 HAMP domain CJO92_RS01600 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS01615 PF07690 Major Facilitator Superfamily CJO92_RS01625 PF07690 Major Facilitator Superfamily CJO92_RS01635 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJO92_RS01650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJO92_RS01650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJO92_RS01665 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS01670 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS01675 PF00005 ABC transporter CJO92_RS01675 PF17912 MalK OB fold domain CJO92_RS01680 PF08402 TOBE domain CJO92_RS01680 PF00005 ABC transporter CJO92_RS01685 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJO92_RS01685 PF01266 FAD dependent oxidoreductase CJO92_RS01690 PF08220 DeoR-like helix-turn-helix domain CJO92_RS01690 PF00455 DeoR C terminal sensor domain CJO92_RS01750 PF03143 Elongation factor Tu C-terminal domain CJO92_RS01750 PF03144 Elongation factor Tu domain 2 CJO92_RS01750 PF00009 Elongation factor Tu GTP binding domain CJO92_RS01765 PF02357 Transcription termination factor nusG CJO92_RS01765 PF00467 KOW motif CJO92_RS01770 PF03946 Ribosomal protein L11, N-terminal domain CJO92_RS01770 PF00298 Ribosomal protein L11, RNA binding domain CJO92_RS01775 PF00687 Ribosomal protein L1p/L10e family CJO92_RS01780 PF00466 Ribosomal protein L10 CJO92_RS01785 PF00542 Ribosomal protein L7/L12 C-terminal domain CJO92_RS01785 PF16320 Ribosomal protein L7/L12 dimerisation domain CJO92_RS01790 PF04560 RNA polymerase Rpb2, domain 7 CJO92_RS01790 PF00562 RNA polymerase Rpb2, domain 6 CJO92_RS01790 PF04563 RNA polymerase beta subunit CJO92_RS01790 PF04561 RNA polymerase Rpb2, domain 2 CJO92_RS01790 PF04565 RNA polymerase Rpb2, domain 3 CJO92_RS01790 PF10385 RNA polymerase beta subunit external 1 domain CJO92_RS01795 PF04983 RNA polymerase Rpb1, domain 3 CJO92_RS01795 PF00623 RNA polymerase Rpb1, domain 2 CJO92_RS01795 PF04997 RNA polymerase Rpb1, domain 1 CJO92_RS01795 PF04998 RNA polymerase Rpb1, domain 5 CJO92_RS01795 PF05000 RNA polymerase Rpb1, domain 4 CJO92_RS01800 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CJO92_RS01805 PF06672 Protein of unknown function (DUF1175) CJO92_RS01810 PF07703 Alpha-2-macroglobulin bait region domain CJO92_RS01810 PF00207 Alpha-2-macroglobulin family CJO92_RS01810 PF01835 MG2 domain CJO92_RS01815 PF08486 Stage II sporulation protein CJO92_RS01815 PF10062 Predicted secreted protein (DUF2300) CJO92_RS01820 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CJO92_RS01825 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CJO92_RS01830 PF08241 Methyltransferase domain CJO92_RS01835 PF09382 RQC domain CJO92_RS01835 PF16124 RecQ zinc-binding CJO92_RS01835 PF00570 HRDC domain CJO92_RS01835 PF00271 Helicase conserved C-terminal domain CJO92_RS01835 PF00270 DEAD/DEAH box helicase CJO92_RS01840 PF00164 Ribosomal protein S12/S23 CJO92_RS01845 PF00177 Ribosomal protein S7p/S5e CJO92_RS01850 PF00679 Elongation factor G C-terminus CJO92_RS01850 PF14492 Elongation Factor G, domain II CJO92_RS01850 PF00009 Elongation factor Tu GTP binding domain CJO92_RS01850 PF03764 Elongation factor G, domain IV CJO92_RS01850 PF03144 Elongation factor Tu domain 2 CJO92_RS01855 PF00009 Elongation factor Tu GTP binding domain CJO92_RS01855 PF03143 Elongation factor Tu C-terminal domain CJO92_RS01855 PF03144 Elongation factor Tu domain 2 CJO92_RS01860 PF00338 Ribosomal protein S10p/S20e CJO92_RS01865 PF00297 Ribosomal protein L3 CJO92_RS01870 PF00573 Ribosomal protein L4/L1 family CJO92_RS01875 PF00276 Ribosomal protein L23 CJO92_RS01880 PF03947 Ribosomal Proteins L2, C-terminal domain CJO92_RS01880 PF00181 Ribosomal Proteins L2, RNA binding domain CJO92_RS01885 PF00203 Ribosomal protein S19 CJO92_RS01890 PF00237 Ribosomal protein L22p/L17e CJO92_RS01895 PF00189 Ribosomal protein S3, C-terminal domain CJO92_RS01895 PF07650 KH domain CJO92_RS01900 PF00252 Ribosomal protein L16p/L10e CJO92_RS01905 PF00831 Ribosomal L29 protein CJO92_RS01910 PF00366 Ribosomal protein S17 CJO92_RS01915 PF00238 Ribosomal protein L14p/L23e CJO92_RS01920 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJO92_RS01925 PF00281 Ribosomal protein L5 CJO92_RS01925 PF00673 ribosomal L5P family C-terminus CJO92_RS01930 PF00253 Ribosomal protein S14p/S29e CJO92_RS01935 PF00410 Ribosomal protein S8 CJO92_RS01940 PF00347 Ribosomal protein L6 CJO92_RS01945 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJO92_RS01950 PF00333 Ribosomal protein S5, N-terminal domain CJO92_RS01950 PF03719 Ribosomal protein S5, C-terminal domain CJO92_RS01955 PF00327 Ribosomal protein L30p/L7e CJO92_RS01960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJO92_RS01965 PF00344 SecY translocase CJO92_RS01970 PF01176 Translation initiation factor 1A / IF-1 CJO92_RS01975 PF00444 Ribosomal protein L36 CJO92_RS01980 PF00416 Ribosomal protein S13/S18 CJO92_RS01985 PF00411 Ribosomal protein S11 CJO92_RS01990 PF01479 S4 domain CJO92_RS01990 PF00163 Ribosomal protein S4/S9 N-terminal domain CJO92_RS01995 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJO92_RS01995 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJO92_RS01995 PF01000 RNA polymerase Rpb3/RpoA insert domain CJO92_RS02000 PF01196 Ribosomal protein L17 CJO92_RS02010 PF11412 Disulphide bond corrector protein DsbC CJO92_RS02010 PF02683 Cytochrome C biogenesis protein transmembrane region CJO92_RS02015 PF00490 Delta-aminolevulinic acid dehydratase CJO92_RS02020 PF01926 50S ribosome-binding GTPase CJO92_RS02025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO92_RS02030 PF05140 ResB-like family CJO92_RS02035 PF01578 Cytochrome C assembly protein CJO92_RS02045 PF04542 Sigma-70 region 2 CJO92_RS02045 PF08281 Sigma-70, region 4 CJO92_RS02055 PF00174 Oxidoreductase molybdopterin binding domain CJO92_RS02060 PF01794 Ferric reductase like transmembrane component CJO92_RS02065 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO92_RS02065 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO92_RS02075 PF01491 Frataxin-like domain CJO92_RS02080 PF00905 Penicillin binding protein transpeptidase domain CJO92_RS02080 PF00912 Transglycosylase CJO92_RS02080 PF17092 Penicillin-binding protein OB-like domain CJO92_RS02085 PF11104 Type IV pilus assembly protein PilM; CJO92_RS02090 PF05137 Fimbrial assembly protein (PilN) CJO92_RS02105 PF11741 AMIN domain CJO92_RS02105 PF00263 Bacterial type II and III secretion system protein CJO92_RS02105 PF03958 Bacterial type II/III secretion system short domain CJO92_RS02105 PF07660 Secretin and TonB N terminus short domain CJO92_RS02110 PF01202 Shikimate kinase CJO92_RS02115 PF01761 3-dehydroquinate synthase CJO92_RS02120 PF13286 Phosphohydrolase-associated domain CJO92_RS02120 PF01966 HD domain CJO92_RS02125 PF03922 OmpW family CJO92_RS02135 PF01493 GXGXG motif CJO92_RS02135 PF01645 Conserved region in glutamate synthase CJO92_RS02135 PF04898 Glutamate synthase central domain CJO92_RS02135 PF00310 Glutamine amidotransferases class-II CJO92_RS02140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS02140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO92_RS02145 PF03401 Tripartite tricarboxylate transporter family receptor CJO92_RS02150 PF00005 ABC transporter CJO92_RS02155 PF02405 Permease MlaE CJO92_RS02160 PF02470 MlaD protein CJO92_RS02165 PF04333 MlaA lipoprotein CJO92_RS02180 PF00005 ABC transporter CJO92_RS02185 PF01061 ABC-2 type transporter CJO92_RS02195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJO92_RS02200 PF01634 ATP phosphoribosyltransferase CJO92_RS02205 PF00815 Histidinol dehydrogenase CJO92_RS02210 PF00155 Aminotransferase class I and II CJO92_RS02215 PF00475 Imidazoleglycerol-phosphate dehydratase CJO92_RS02220 PF01914 MarC family integral membrane protein CJO92_RS02225 PF00117 Glutamine amidotransferase class-I CJO92_RS02230 PF00977 Histidine biosynthesis protein CJO92_RS02235 PF00977 Histidine biosynthesis protein CJO92_RS02240 PF01502 Phosphoribosyl-AMP cyclohydrolase CJO92_RS02245 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJO92_RS02255 PF02416 mttA/Hcf106 family CJO92_RS02260 PF02416 mttA/Hcf106 family CJO92_RS02265 PF00902 Sec-independent protein translocase protein (TatC) CJO92_RS02270 PF08402 TOBE domain CJO92_RS02270 PF00005 ABC transporter CJO92_RS02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS02285 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS02290 PF00072 Response regulator receiver domain CJO92_RS02290 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS02300 PF13609 Gram-negative porin CJO92_RS02305 PF13180 PDZ domain CJO92_RS02305 PF17820 PDZ domain CJO92_RS02310 PF01784 NIF3 (NGG1p interacting factor 3) CJO92_RS02315 PF01741 Large-conductance mechanosensitive channel, MscL CJO92_RS02320 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJO92_RS02320 PF00355 Rieske [2Fe-2S] domain CJO92_RS02325 PF00032 Cytochrome b(C-terminal)/b6/petD CJO92_RS02325 PF00033 Cytochrome b/b6/petB CJO92_RS02330 PF02167 Cytochrome C1 family CJO92_RS02335 PF02798 Glutathione S-transferase, N-terminal domain CJO92_RS02335 PF00043 Glutathione S-transferase, C-terminal domain CJO92_RS02340 PF04386 Stringent starvation protein B CJO92_RS02350 PF00072 Response regulator receiver domain CJO92_RS02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS02365 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS02365 PF00593 TonB dependent receptor CJO92_RS02370 PF16220 Domain of unknown function (DUF4880) CJO92_RS02370 PF04773 FecR protein CJO92_RS02380 PF06481 COX Aromatic Rich Motif CJO92_RS02380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO92_RS02385 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO92_RS02390 PF00510 Cytochrome c oxidase subunit III CJO92_RS02395 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJO92_RS02400 PF00005 ABC transporter CJO92_RS02400 PF12848 ABC transporter CJO92_RS02420 PF00535 Glycosyl transferase family 2 CJO92_RS02425 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJO92_RS02435 PF02441 Flavoprotein CJO92_RS02440 PF00462 Glutaredoxin CJO92_RS02445 PF05175 Methyltransferase small domain CJO92_RS02445 PF17827 PrmC N-terminal domain CJO92_RS02455 PF00472 RF-1 domain CJO92_RS02455 PF03462 PCRF domain CJO92_RS02460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CJO92_RS02460 PF01488 Shikimate / quinate 5-dehydrogenase CJO92_RS02460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CJO92_RS02470 PF01926 50S ribosome-binding GTPase CJO92_RS02470 PF06071 Protein of unknown function (DUF933) CJO92_RS02480 PF01464 Transglycosylase SLT domain CJO92_RS02500 PF01494 FAD binding domain CJO92_RS02505 PF13098 Thioredoxin-like domain CJO92_RS02505 PF10411 Disulfide bond isomerase protein N-terminus CJO92_RS02510 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS02510 PF00107 Zinc-binding dehydrogenase CJO92_RS02520 PF12805 FUSC-like inner membrane protein yccS CJO92_RS02540 PF03167 Uracil DNA glycosylase superfamily CJO92_RS02550 PF00218 Indole-3-glycerol phosphate synthase CJO92_RS02555 PF00591 Glycosyl transferase family, a/b domain CJO92_RS02555 PF02885 Glycosyl transferase family, helical bundle domain CJO92_RS02565 PF00117 Glutamine amidotransferase class-I CJO92_RS02570 PF04715 Anthranilate synthase component I, N terminal region CJO92_RS02570 PF00425 chorismate binding enzyme CJO92_RS02575 PF13419 Haloacid dehalogenase-like hydrolase CJO92_RS02580 PF00834 Ribulose-phosphate 3 epimerase family CJO92_RS02585 PF04379 ApaG domain CJO92_RS02600 PF14535 AMP-binding enzyme C-terminal domain CJO92_RS02600 PF00501 AMP-binding enzyme CJO92_RS02605 PF03061 Thioesterase superfamily CJO92_RS02610 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS02615 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS02650 PF07687 Peptidase dimerisation domain CJO92_RS02650 PF01546 Peptidase family M20/M25/M40 CJO92_RS02655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS02665 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS02665 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO92_RS02670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS02670 PF00005 ABC transporter CJO92_RS02675 PF00005 ABC transporter CJO92_RS02675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS02680 PF01546 Peptidase family M20/M25/M40 CJO92_RS02680 PF07687 Peptidase dimerisation domain CJO92_RS02690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJO92_RS02695 PF00294 pfkB family carbohydrate kinase CJO92_RS02700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJO92_RS02700 PF00381 PTS HPr component phosphorylation site CJO92_RS02700 PF00391 PEP-utilising enzyme, mobile domain CJO92_RS02700 PF05524 PEP-utilising enzyme, N-terminal CJO92_RS02700 PF02896 PEP-utilising enzyme, TIM barrel domain CJO92_RS02705 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS02710 PF00384 Molybdopterin oxidoreductase CJO92_RS02710 PF01568 Molydopterin dinucleotide binding domain CJO92_RS02710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO92_RS02720 PF00501 AMP-binding enzyme CJO92_RS02720 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS02725 PF00083 Sugar (and other) transporter CJO92_RS02725 PF07690 Major Facilitator Superfamily CJO92_RS02730 PF13609 Gram-negative porin CJO92_RS02735 PF03232 Ubiquinone biosynthesis protein COQ7 CJO92_RS02740 PF02381 MraZ protein, putative antitoxin-like CJO92_RS02745 PF01795 MraW methylase family CJO92_RS02755 PF00905 Penicillin binding protein transpeptidase domain CJO92_RS02755 PF03717 Penicillin-binding Protein dimerisation domain CJO92_RS02760 PF08245 Mur ligase middle domain CJO92_RS02760 PF02875 Mur ligase family, glutamate ligase domain CJO92_RS02765 PF02875 Mur ligase family, glutamate ligase domain CJO92_RS02765 PF08245 Mur ligase middle domain CJO92_RS02765 PF01225 Mur ligase family, catalytic domain CJO92_RS02770 PF00953 Glycosyl transferase family 4 CJO92_RS02770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJO92_RS02775 PF08245 Mur ligase middle domain CJO92_RS02775 PF02875 Mur ligase family, glutamate ligase domain CJO92_RS02780 PF01098 Cell cycle protein CJO92_RS02785 PF03033 Glycosyltransferase family 28 N-terminal domain CJO92_RS02785 PF04101 Glycosyltransferase family 28 C-terminal domain CJO92_RS02790 PF08245 Mur ligase middle domain CJO92_RS02790 PF01225 Mur ligase family, catalytic domain CJO92_RS02790 PF02875 Mur ligase family, glutamate ligase domain CJO92_RS02795 PF01820 D-ala D-ala ligase N-terminus CJO92_RS02795 PF07478 D-ala D-ala ligase C-terminus CJO92_RS02800 PF08478 POTRA domain, FtsQ-type CJO92_RS02800 PF03799 Cell division protein FtsQ CJO92_RS02805 PF02491 SHS2 domain inserted in FTSA CJO92_RS02810 PF00091 Tubulin/FtsZ family, GTPase domain CJO92_RS02810 PF12327 FtsZ family, C-terminal domain CJO92_RS02815 PF08534 Redoxin CJO92_RS02820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJO92_RS02830 PF01476 LysM domain CJO92_RS02830 PF08525 Opacity-associated protein A N-terminal motif CJO92_RS02830 PF01551 Peptidase family M23 CJO92_RS02835 PF07517 SecA DEAD-like domain CJO92_RS02835 PF02810 SEC-C motif CJO92_RS02835 PF07516 SecA Wing and Scaffold domain CJO92_RS02835 PF01043 SecA preprotein cross-linking domain CJO92_RS02840 PF01960 ArgJ family CJO92_RS02850 PF00293 NUDIX domain CJO92_RS02855 PF03884 DNA gyrase inhibitor YacG CJO92_RS02860 PF07072 Cell division protein CJO92_RS02865 PF01121 Dephospho-CoA kinase CJO92_RS02870 PF01478 Type IV leader peptidase family CJO92_RS02870 PF06750 Bacterial Peptidase A24 N-terminal domain CJO92_RS02875 PF00482 Type II secretion system (T2SS), protein F CJO92_RS02880 PF00437 Type II/IV secretion system protein CJO92_RS02880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CJO92_RS02885 PF00571 CBS domain CJO92_RS02885 PF03471 Transporter associated domain CJO92_RS02885 PF01595 Cyclin M transmembrane N-terminal domain CJO92_RS02895 PF00348 Polyprenyl synthetase CJO92_RS02900 PF00829 Ribosomal prokaryotic L21 protein CJO92_RS02905 PF01016 Ribosomal L27 protein CJO92_RS02910 PF01018 GTP1/OBG CJO92_RS02910 PF01926 50S ribosome-binding GTPase CJO92_RS02915 PF01472 PUA domain CJO92_RS02915 PF00696 Amino acid kinase family CJO92_RS02925 PF00293 NUDIX domain CJO92_RS02930 PF03129 Anticodon binding domain CJO92_RS02930 PF04073 Aminoacyl-tRNA editing domain CJO92_RS02930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO92_RS02935 PF01464 Transglycosylase SLT domain CJO92_RS02945 PF01914 MarC family integral membrane protein CJO92_RS02950 PF00156 Phosphoribosyl transferase domain CJO92_RS02955 PF02978 Signal peptide binding domain CJO92_RS02955 PF02881 SRP54-type protein, helical bundle domain CJO92_RS02955 PF00448 SRP54-type protein, GTPase domain CJO92_RS02960 PF01578 Cytochrome C assembly protein CJO92_RS02970 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS02975 PF02954 Bacterial regulatory protein, Fis family CJO92_RS02975 PF00072 Response regulator receiver domain CJO92_RS02975 PF00158 Sigma-54 interaction domain CJO92_RS02980 PF01510 N-acetylmuramoyl-L-alanine amidase CJO92_RS02985 PF00317 Ribonucleotide reductase, all-alpha domain CJO92_RS02985 PF02867 Ribonucleotide reductase, barrel domain CJO92_RS02985 PF03477 ATP cone domain CJO92_RS02990 PF00268 Ribonucleotide reductase, small chain CJO92_RS03000 PF00892 EamA-like transporter family CJO92_RS03005 PF01037 Lrp/AsnC ligand binding domain CJO92_RS03015 PF02203 Tar ligand binding domain homologue CJO92_RS03015 PF00672 HAMP domain CJO92_RS03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS03060 PF00294 pfkB family carbohydrate kinase CJO92_RS03065 PF08534 Redoxin CJO92_RS03080 PF00289 Biotin carboxylase, N-terminal domain CJO92_RS03080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO92_RS03080 PF02785 Biotin carboxylase C-terminal domain CJO92_RS03085 PF00364 Biotin-requiring enzyme CJO92_RS03090 PF01220 Dehydroquinase class II CJO92_RS03095 PF00085 Thioredoxin CJO92_RS03105 PF01225 Mur ligase family, catalytic domain CJO92_RS03105 PF02875 Mur ligase family, glutamate ligase domain CJO92_RS03105 PF08245 Mur ligase middle domain CJO92_RS03110 PF05728 Uncharacterised protein family (UPF0227) CJO92_RS03115 PF04345 Chorismate lyase CJO92_RS03120 PF00773 RNB domain CJO92_RS03130 PF01488 Shikimate / quinate 5-dehydrogenase CJO92_RS03130 PF08501 Shikimate dehydrogenase substrate binding domain CJO92_RS03130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJO92_RS03135 PF00912 Transglycosylase CJO92_RS03145 PF01544 CorA-like Mg2+ transporter protein CJO92_RS03150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJO92_RS03155 PF01545 Cation efflux family CJO92_RS03160 PF18146 Damage-inducible protein CinA KH domain CJO92_RS03160 PF02464 Competence-damaged protein CJO92_RS03160 PF00994 Probable molybdopterin binding domain CJO92_RS03165 PF04608 Phosphatidylglycerophosphatase A CJO92_RS03170 PF02769 AIR synthase related protein, C-terminal domain CJO92_RS03170 PF00586 AIR synthase related protein, N-terminal domain CJO92_RS03175 PF00390 Malic enzyme, N-terminal domain CJO92_RS03175 PF03949 Malic enzyme, NAD binding domain CJO92_RS03175 PF01515 Phosphate acetyl/butaryl transferase CJO92_RS03195 PF04452 RNA methyltransferase CJO92_RS03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS03205 PF03466 LysR substrate binding domain CJO92_RS03210 PF13609 Gram-negative porin CJO92_RS03220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJO92_RS03225 PF00005 ABC transporter CJO92_RS03230 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS03235 PF08450 SMP-30/Gluconolactonase/LRE-like region CJO92_RS03250 PF01081 KDPG and KHG aldolase CJO92_RS03255 PF13378 Enolase C-terminal domain-like CJO92_RS03255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO92_RS03260 PF00456 Transketolase, thiamine diphosphate binding domain CJO92_RS03260 PF02780 Transketolase, C-terminal domain CJO92_RS03260 PF02779 Transketolase, pyrimidine binding domain CJO92_RS03265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJO92_RS03265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJO92_RS03275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS03275 PF03466 LysR substrate binding domain CJO92_RS03280 PF01475 Ferric uptake regulator family CJO92_RS03285 PF04355 SmpA / OmlA family CJO92_RS03290 PF01113 Dihydrodipicolinate reductase, N-terminus CJO92_RS03290 PF05173 Dihydrodipicolinate reductase, C-terminus CJO92_RS03295 PF09334 tRNA synthetases class I (M) CJO92_RS03295 PF13603 Leucyl-tRNA synthetase, Domain 2 CJO92_RS03295 PF00133 tRNA synthetases class I (I, L, M and V) CJO92_RS03295 PF08264 Anticodon-binding domain of tRNA CJO92_RS03305 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CJO92_RS03305 PF06144 DNA polymerase III, delta subunit CJO92_RS03310 PF00171 Aldehyde dehydrogenase family CJO92_RS03315 PF03653 Uncharacterised protein family (UPF0093) CJO92_RS03320 PF01170 Putative RNA methylase family UPF0020 CJO92_RS03320 PF02926 THUMP domain CJO92_RS03325 PF00158 Sigma-54 interaction domain CJO92_RS03325 PF00072 Response regulator receiver domain CJO92_RS03325 PF02954 Bacterial regulatory protein, Fis family CJO92_RS03330 PF00989 PAS fold CJO92_RS03330 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS03335 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS03345 PF00072 Response regulator receiver domain CJO92_RS03350 PF02233 NAD(P) transhydrogenase beta subunit CJO92_RS03355 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJO92_RS03360 PF02261 Aspartate decarboxylase CJO92_RS03365 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJO92_RS03365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJO92_RS03370 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS03370 PF00593 TonB dependent receptor CJO92_RS03380 PF07690 Major Facilitator Superfamily CJO92_RS03385 PF13533 Biotin-lipoyl like CJO92_RS03395 PF00293 NUDIX domain CJO92_RS03405 PF01645 Conserved region in glutamate synthase CJO92_RS03410 PF13417 Glutathione S-transferase, N-terminal domain CJO92_RS03410 PF00043 Glutathione S-transferase, C-terminal domain CJO92_RS03415 PF00206 Lyase CJO92_RS03415 PF08328 Adenylosuccinate lyase C-terminal CJO92_RS03420 PF01292 Prokaryotic cytochrome b561 CJO92_RS03425 PF04264 YceI-like domain CJO92_RS03430 PF04264 YceI-like domain CJO92_RS03435 PF02355 Protein export membrane protein CJO92_RS03435 PF07549 SecD/SecF GG Motif CJO92_RS03440 PF02355 Protein export membrane protein CJO92_RS03440 PF07549 SecD/SecF GG Motif CJO92_RS03440 PF13721 SecD export protein N-terminal TM region CJO92_RS03450 PF01702 Queuine tRNA-ribosyltransferase CJO92_RS03455 PF02547 Queuosine biosynthesis protein CJO92_RS03490 PF00313 'Cold-shock' DNA-binding domain CJO92_RS03515 PF17524 Anti-sigma factor CnrY CJO92_RS03520 PF13801 Heavy-metal resistance CJO92_RS03525 PF04542 Sigma-70 region 2 CJO92_RS03525 PF08281 Sigma-70, region 4 CJO92_RS03530 PF02321 Outer membrane efflux protein CJO92_RS03535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS03540 PF00873 AcrB/AcrD/AcrF family CJO92_RS03545 PF09828 Chromate resistance exported protein CJO92_RS03550 PF02417 Chromate transporter CJO92_RS03555 PF09828 Chromate resistance exported protein CJO92_RS03575 PF03466 LysR substrate binding domain CJO92_RS03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS03580 PF06628 Catalase-related immune-responsive CJO92_RS03580 PF00199 Catalase CJO92_RS03590 PF00210 Ferritin-like domain CJO92_RS03595 PF01040 UbiA prenyltransferase family CJO92_RS03605 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJO92_RS03605 PF03807 NADP oxidoreductase coenzyme F420-dependent CJO92_RS03610 PF01168 Alanine racemase, N-terminal domain CJO92_RS03615 PF00437 Type II/IV secretion system protein CJO92_RS03620 PF00437 Type II/IV secretion system protein CJO92_RS03655 PF00255 Glutathione peroxidase CJO92_RS03665 PF07883 Cupin domain CJO92_RS03675 PF04172 LrgB-like family CJO92_RS03680 PF03788 LrgA family CJO92_RS03685 PF13183 4Fe-4S dicluster domain CJO92_RS03685 PF02754 Cysteine-rich domain CJO92_RS03690 PF01565 FAD binding domain CJO92_RS03695 PF01565 FAD binding domain CJO92_RS03695 PF02913 FAD linked oxidases, C-terminal domain CJO92_RS03700 PF03466 LysR substrate binding domain CJO92_RS03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS03705 PF01565 FAD binding domain CJO92_RS03705 PF02913 FAD linked oxidases, C-terminal domain CJO92_RS03710 PF01923 Cobalamin adenosyltransferase CJO92_RS03715 PF05552 Conserved TM helix CJO92_RS03715 PF00924 Mechanosensitive ion channel CJO92_RS03725 PF13657 HipA N-terminal domain CJO92_RS03725 PF07804 HipA-like C-terminal domain CJO92_RS03730 PF00793 DAHP synthetase I family CJO92_RS03735 PF01523 Putative modulator of DNA gyrase CJO92_RS03740 PF00795 Carbon-nitrogen hydrolase CJO92_RS03750 PF08335 GlnD PII-uridylyltransferase CJO92_RS03750 PF03710 Glutamate-ammonia ligase adenylyltransferase CJO92_RS03760 PF01483 Proprotein convertase P-domain CJO92_RS03760 PF00082 Subtilase family CJO92_RS03765 PF00082 Subtilase family CJO92_RS03765 PF04151 Bacterial pre-peptidase C-terminal domain CJO92_RS03775 PF02463 RecF/RecN/SMC N terminal domain CJO92_RS03780 PF01513 ATP-NAD kinase CJO92_RS03785 PF01628 HrcA protein C terminal domain CJO92_RS03790 PF07702 UTRA domain CJO92_RS03790 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS03795 PF17392 Urocanase C-terminal domain CJO92_RS03795 PF17391 Urocanase N-terminal domain CJO92_RS03795 PF01175 Urocanase Rossmann-like domain CJO92_RS03800 PF00221 Aromatic amino acid lyase CJO92_RS03805 PF00491 Arginase family CJO92_RS03810 PF01979 Amidohydrolase family CJO92_RS03815 PF00762 Ferrochelatase CJO92_RS03820 PF01479 S4 domain CJO92_RS03835 PF01025 GrpE CJO92_RS03845 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO92_RS03845 PF14760 Rnk N-terminus CJO92_RS03850 PF00012 Hsp70 protein CJO92_RS03855 PF01556 DnaJ C terminal domain CJO92_RS03855 PF00684 DnaJ central domain CJO92_RS03855 PF00226 DnaJ domain CJO92_RS03860 PF04715 Anthranilate synthase component I, N terminal region CJO92_RS03860 PF00425 chorismate binding enzyme CJO92_RS03860 PF00117 Glutamine amidotransferase class-I CJO92_RS03865 PF00005 ABC transporter CJO92_RS03865 PF12857 TOBE-like domain CJO92_RS03870 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS03875 PF02548 Ketopantoate hydroxymethyltransferase CJO92_RS03885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJO92_RS03890 PF12626 Polymerase A arginine-rich C-terminus CJO92_RS03890 PF01743 Poly A polymerase head domain CJO92_RS03890 PF12627 Probable RNA and SrmB- binding site of polymerase A CJO92_RS03900 PF00308 Bacterial dnaA protein CJO92_RS03905 PF01594 AI-2E family transporter CJO92_RS03910 PF02769 AIR synthase related protein, C-terminal domain CJO92_RS03910 PF00586 AIR synthase related protein, N-terminal domain CJO92_RS03925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO92_RS03925 PF12833 Helix-turn-helix domain CJO92_RS03925 PF02805 Metal binding domain of Ada CJO92_RS03925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO92_RS03935 PF13532 2OG-Fe(II) oxygenase superfamily CJO92_RS03940 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CJO92_RS03945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO92_RS03945 PF12833 Helix-turn-helix domain CJO92_RS03945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO92_RS03945 PF02805 Metal binding domain of Ada CJO92_RS03960 PF08676 MutL C terminal dimerisation domain CJO92_RS03960 PF01119 DNA mismatch repair protein, C-terminal domain CJO92_RS03965 PF02470 MlaD protein CJO92_RS03980 PF09335 SNARE associated Golgi protein CJO92_RS03985 PF13369 Transglutaminase-like superfamily CJO92_RS03990 PF03023 Lipid II flippase MurJ CJO92_RS03995 PF01649 Ribosomal protein S20 CJO92_RS04005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJO92_RS04005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJO92_RS04010 PF00764 Arginosuccinate synthase CJO92_RS04015 PF06865 Pyrimidine/purine nucleoside phosphorylase CJO92_RS04025 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJO92_RS04025 PF01565 FAD binding domain CJO92_RS04030 PF04461 Protein of unknown function (DUF520) CJO92_RS04035 PF01156 Inosine-uridine preferring nucleoside hydrolase CJO92_RS04040 PF02660 Glycerol-3-phosphate acyltransferase CJO92_RS04045 PF04073 Aminoacyl-tRNA editing domain CJO92_RS04050 PF02899 Phage integrase, N-terminal SAM-like domain CJO92_RS04050 PF00589 Phage integrase family CJO92_RS04055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO92_RS04065 PF08331 Domain of unknown function (DUF1730) CJO92_RS04070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJO92_RS04075 PF01520 N-acetylmuramoyl-L-alanine amidase CJO92_RS04075 PF11741 AMIN domain CJO92_RS04080 PF13593 SBF-like CPA transporter family (DUF4137) CJO92_RS04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS04085 PF03466 LysR substrate binding domain CJO92_RS04090 PF00106 short chain dehydrogenase CJO92_RS04095 PF05191 Adenylate kinase, active site lid CJO92_RS04100 PF02348 Cytidylyltransferase CJO92_RS04105 PF03966 Trm112p-like protein CJO92_RS04110 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJO92_RS04115 PF02472 Biopolymer transport protein ExbD/TolR CJO92_RS04120 PF01618 MotA/TolQ/ExbB proton channel family CJO92_RS04125 PF02601 Exonuclease VII, large subunit CJO92_RS04125 PF13742 OB-fold nucleic acid binding domain CJO92_RS04130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJO92_RS04130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJO92_RS04135 PF00106 short chain dehydrogenase CJO92_RS04140 PF02163 Peptidase family M50 CJO92_RS04140 PF00571 CBS domain CJO92_RS04150 PF05962 HutD CJO92_RS04155 PF00216 Bacterial DNA-binding protein CJO92_RS04165 PF07690 Major Facilitator Superfamily CJO92_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS04190 PF11871 Domain of unknown function (DUF3391) CJO92_RS04190 PF01966 HD domain CJO92_RS04205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS04235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO92_RS04235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO92_RS04240 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO92_RS04240 PF06029 AlkA N-terminal domain CJO92_RS04250 PF04228 Putative neutral zinc metallopeptidase CJO92_RS04265 PF07681 DoxX CJO92_RS04270 PF07690 Major Facilitator Superfamily CJO92_RS04275 PF03466 LysR substrate binding domain CJO92_RS04275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS04280 PF03466 LysR substrate binding domain CJO92_RS04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS04290 PF12706 Beta-lactamase superfamily domain CJO92_RS04300 PF03150 Di-haem cytochrome c peroxidase CJO92_RS04315 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO92_RS04340 PF00313 'Cold-shock' DNA-binding domain CJO92_RS04345 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJO92_RS04350 PF10431 C-terminal, D2-small domain, of ClpB protein CJO92_RS04350 PF02861 Clp amino terminal domain, pathogenicity island component CJO92_RS04350 PF17871 AAA lid domain CJO92_RS04350 PF07724 AAA domain (Cdc48 subfamily) CJO92_RS04350 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS04355 PF00692 dUTPase CJO92_RS04360 PF00296 Luciferase-like monooxygenase CJO92_RS04365 PF02441 Flavoprotein CJO92_RS04365 PF04127 DNA / pantothenate metabolism flavoprotein CJO92_RS04375 PF01252 Signal peptidase (SPase) II CJO92_RS04380 PF06827 Zinc finger found in FPG and IleRS CJO92_RS04380 PF00133 tRNA synthetases class I (I, L, M and V) CJO92_RS04380 PF08264 Anticodon-binding domain of tRNA CJO92_RS04385 PF01687 Riboflavin kinase CJO92_RS04385 PF06574 FAD synthetase CJO92_RS04390 PF00072 Response regulator receiver domain CJO92_RS04390 PF09308 LuxQ, periplasmic CJO92_RS04390 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS04390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS04395 PF00072 Response regulator receiver domain CJO92_RS04395 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS04400 PF00551 Formyl transferase CJO92_RS04405 PF01029 NusB family CJO92_RS04405 PF01189 16S rRNA methyltransferase RsmB/F CJO92_RS04410 PF13091 PLD-like domain CJO92_RS04415 PF00924 Mechanosensitive ion channel CJO92_RS04415 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJO92_RS04415 PF12795 Mechanosensitive ion channel porin domain CJO92_RS04425 PF02445 Quinolinate synthetase A protein CJO92_RS04430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJO92_RS04430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJO92_RS04435 PF02910 Fumarate reductase flavoprotein C-term CJO92_RS04435 PF00890 FAD binding domain CJO92_RS04440 PF00471 Ribosomal protein L33 CJO92_RS04445 PF00830 Ribosomal L28 family CJO92_RS04450 PF04002 RadC-like JAB domain CJO92_RS04455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO92_RS04460 PF02401 LytB protein CJO92_RS04465 PF13458 Periplasmic binding protein CJO92_RS04470 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS04475 PF11862 Domain of unknown function (DUF3382) CJO92_RS04475 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS04480 PF00005 ABC transporter CJO92_RS04480 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS04485 PF00005 ABC transporter CJO92_RS04495 PF00202 Aminotransferase class-III CJO92_RS04500 PF00970 Oxidoreductase FAD-binding domain CJO92_RS04500 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS04500 PF00175 Oxidoreductase NAD-binding domain CJO92_RS04510 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS04530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJO92_RS04530 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJO92_RS04540 PF03466 LysR substrate binding domain CJO92_RS04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS04545 PF01925 Sulfite exporter TauE/SafE CJO92_RS04550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO92_RS04550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJO92_RS04560 PF01507 Phosphoadenosine phosphosulfate reductase family CJO92_RS04565 PF01507 Phosphoadenosine phosphosulfate reductase family CJO92_RS04570 PF00009 Elongation factor Tu GTP binding domain CJO92_RS04575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS04575 PF10414 Sirohaem synthase dimerisation region CJO92_RS04575 PF14824 Sirohaem biosynthesis protein central CJO92_RS04600 PF00883 Cytosol aminopeptidase family, catalytic domain CJO92_RS04600 PF02789 Cytosol aminopeptidase family, N-terminal domain CJO92_RS04615 PF00920 Dehydratase family CJO92_RS04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS04620 PF03466 LysR substrate binding domain CJO92_RS04625 PF01790 Prolipoprotein diacylglyceryl transferase CJO92_RS04655 PF00593 TonB dependent receptor CJO92_RS04655 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS04660 PF01032 FecCD transport family CJO92_RS04665 PF00005 ABC transporter CJO92_RS04670 PF02277 Phosphoribosyltransferase CJO92_RS04675 PF02654 Cobalamin-5-phosphate synthase CJO92_RS04685 PF01497 Periplasmic binding protein CJO92_RS04690 PF00155 Aminotransferase class I and II CJO92_RS04695 PF17113 Regulatory signalling modulator protein AmpE CJO92_RS04695 PF03186 CobD/Cbib protein CJO92_RS04700 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CJO92_RS04705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO92_RS04705 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJO92_RS04715 PF02569 Pantoate-beta-alanine ligase CJO92_RS04720 PF02616 Segregation and condensation protein ScpA CJO92_RS04735 PF04357 TamB, inner membrane protein subunit of TAM complex CJO92_RS04745 PF09334 tRNA synthetases class I (M) CJO92_RS04745 PF01588 Putative tRNA binding domain CJO92_RS04750 PF05736 OprF membrane domain CJO92_RS04750 PF00691 OmpA family CJO92_RS04755 PF10609 NUBPL iron-transfer P-loop NTPase CJO92_RS04785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO92_RS04785 PF01568 Molydopterin dinucleotide binding domain CJO92_RS04785 PF00384 Molybdopterin oxidoreductase CJO92_RS04790 PF13247 4Fe-4S dicluster domain CJO92_RS04810 PF00080 Copper/zinc superoxide dismutase (SODC) CJO92_RS04815 PF02634 FdhD/NarQ family CJO92_RS04820 PF00692 dUTPase CJO92_RS04825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJO92_RS04825 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJO92_RS04825 PF01276 Orn/Lys/Arg decarboxylase, major domain CJO92_RS04830 PF07015 VirC1 protein CJO92_RS04850 PF00206 Lyase CJO92_RS04850 PF14698 Argininosuccinate lyase C-terminal CJO92_RS04860 PF04542 Sigma-70 region 2 CJO92_RS04860 PF08281 Sigma-70, region 4 CJO92_RS04870 PF00311 Phosphoenolpyruvate carboxylase CJO92_RS04875 PF03900 Porphobilinogen deaminase, C-terminal domain CJO92_RS04875 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJO92_RS04880 PF02602 Uroporphyrinogen-III synthase HemD CJO92_RS04900 PF07690 Major Facilitator Superfamily CJO92_RS04910 PF00171 Aldehyde dehydrogenase family CJO92_RS04915 PF00719 Inorganic pyrophosphatase CJO92_RS04930 PF00795 Carbon-nitrogen hydrolase CJO92_RS04930 PF02540 NAD synthase CJO92_RS04935 PF01209 ubiE/COQ5 methyltransferase family CJO92_RS04940 PF00543 Nitrogen regulatory protein P-II CJO92_RS04945 PF03458 UPF0126 domain CJO92_RS04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS04960 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJO92_RS04960 PF09397 Ftsk gamma domain CJO92_RS04960 PF01580 FtsK/SpoIIIE family CJO92_RS04960 PF17854 FtsK alpha domain CJO92_RS04965 PF03548 Outer membrane lipoprotein carrier protein LolA CJO92_RS04975 PF16193 AAA C-terminal domain CJO92_RS04975 PF12002 MgsA AAA+ ATPase C terminal CJO92_RS04975 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS04980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO92_RS04980 PF02403 Seryl-tRNA synthetase N-terminal domain CJO92_RS04990 PF02796 Helix-turn-helix domain of resolvase CJO92_RS04990 PF00239 Resolvase, N terminal domain CJO92_RS05015 PF12833 Helix-turn-helix domain CJO92_RS05035 PF06903 VirK protein CJO92_RS05060 PF13411 MerR HTH family regulatory protein CJO92_RS05065 PF02627 Carboxymuconolactone decarboxylase family CJO92_RS05070 PF00571 CBS domain CJO92_RS05070 PF03471 Transporter associated domain CJO92_RS05070 PF01595 Cyclin M transmembrane N-terminal domain CJO92_RS05120 PF01266 FAD dependent oxidoreductase CJO92_RS05125 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS05130 PF00005 ABC transporter CJO92_RS05135 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS05140 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS05145 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS05155 PF09339 IclR helix-turn-helix domain CJO92_RS05155 PF01614 Bacterial transcriptional regulator CJO92_RS05160 PF01144 Coenzyme A transferase CJO92_RS05165 PF01144 Coenzyme A transferase CJO92_RS05170 PF02803 Thiolase, C-terminal domain CJO92_RS05170 PF00108 Thiolase, N-terminal domain CJO92_RS05175 PF00206 Lyase CJO92_RS05175 PF10397 Adenylosuccinate lyase C-terminus CJO92_RS05180 PF12146 Serine aminopeptidase, S33 CJO92_RS05185 PF02627 Carboxymuconolactone decarboxylase family CJO92_RS05190 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS05200 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS05200 PF00005 ABC transporter CJO92_RS05205 PF00005 ABC transporter CJO92_RS05210 PF13458 Periplasmic binding protein CJO92_RS05215 PF03466 LysR substrate binding domain CJO92_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS05220 PF01494 FAD binding domain CJO92_RS05225 PF03537 Glycoside-hydrolase family GH114 CJO92_RS05235 PF01176 Translation initiation factor 1A / IF-1 CJO92_RS05245 PF00483 Nucleotidyl transferase CJO92_RS05250 PF10458 Valyl tRNA synthetase tRNA binding arm CJO92_RS05250 PF08264 Anticodon-binding domain of tRNA CJO92_RS05250 PF00133 tRNA synthetases class I (I, L, M and V) CJO92_RS05255 PF13361 UvrD-like helicase C-terminal domain CJO92_RS05255 PF00580 UvrD/REP helicase N-terminal domain CJO92_RS05265 PF01636 Phosphotransferase enzyme family CJO92_RS05275 PF03641 Possible lysine decarboxylase CJO92_RS05280 PF01367 5'-3' exonuclease, C-terminal SAM fold CJO92_RS05280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJO92_RS05280 PF00476 DNA polymerase family A CJO92_RS05280 PF01612 3'-5' exonuclease CJO92_RS05285 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS05290 PF01738 Dienelactone hydrolase family CJO92_RS05300 PF00581 Rhodanese-like domain CJO92_RS05315 PF02609 Exonuclease VII small subunit CJO92_RS05320 PF00348 Polyprenyl synthetase CJO92_RS05325 PF02780 Transketolase, C-terminal domain CJO92_RS05325 PF02779 Transketolase, pyrimidine binding domain CJO92_RS05325 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJO92_RS05330 PF02649 Type I GTP cyclohydrolase folE2 CJO92_RS05335 PF00814 Glycoprotease family CJO92_RS05345 PF09424 Yqey-like protein CJO92_RS05350 PF01807 CHC2 zinc finger CJO92_RS05350 PF10410 DnaB-helicase binding domain of primase CJO92_RS05350 PF08278 DNA primase DnaG DnaB-binding CJO92_RS05350 PF08275 DNA primase catalytic core, N-terminal domain CJO92_RS05355 PF00140 Sigma-70 factor, region 1.2 CJO92_RS05355 PF04539 Sigma-70 region 3 CJO92_RS05355 PF03979 Sigma-70 factor, region 1.1 CJO92_RS05355 PF04546 Sigma-70, non-essential region CJO92_RS05355 PF04545 Sigma-70, region 4 CJO92_RS05355 PF04542 Sigma-70 region 2 CJO92_RS05375 PF01613 Flavin reductase like domain CJO92_RS05375 PF00258 Flavodoxin CJO92_RS05380 PF00271 Helicase conserved C-terminal domain CJO92_RS05380 PF00270 DEAD/DEAH box helicase CJO92_RS05385 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO92_RS05390 PF03466 LysR substrate binding domain CJO92_RS05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS05395 PF17954 Quercetinase C-terminal cupin domain CJO92_RS05395 PF02678 Pirin CJO92_RS05400 PF03358 NADPH-dependent FMN reductase CJO92_RS05405 PF17773 UPF0176 acylphosphatase like domain CJO92_RS05410 PF01336 OB-fold nucleic acid binding domain CJO92_RS05410 PF14579 Helix-hairpin-helix motif CJO92_RS05410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJO92_RS05410 PF02811 PHP domain CJO92_RS05410 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJO92_RS05425 PF00535 Glycosyl transferase family 2 CJO92_RS05435 PF00664 ABC transporter transmembrane region CJO92_RS05435 PF00005 ABC transporter CJO92_RS05450 PF00575 S1 RNA binding domain CJO92_RS05450 PF10150 Ribonuclease E/G family CJO92_RS05455 PF02545 Maf-like protein CJO92_RS05460 PF02590 Predicted SPOUT methyltransferase CJO92_RS05470 PF01467 Cytidylyltransferase-like CJO92_RS05475 PF01218 Coproporphyrinogen III oxidase CJO92_RS05480 PF02843 Phosphoribosylglycinamide synthetase, C domain CJO92_RS05480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJO92_RS05480 PF02844 Phosphoribosylglycinamide synthetase, N domain CJO92_RS05485 PF01709 Transcriptional regulator CJO92_RS05490 PF05872 Bacterial protein of unknown function (DUF853) CJO92_RS05500 PF00892 EamA-like transporter family CJO92_RS05510 PF02142 MGS-like domain CJO92_RS05515 PF00107 Zinc-binding dehydrogenase CJO92_RS05515 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS05540 PF02560 Cyanate lyase C-terminal domain CJO92_RS05545 PF00155 Aminotransferase class I and II CJO92_RS05545 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS05555 PF01979 Amidohydrolase family CJO92_RS05560 PF02608 ABC transporter substrate-binding protein PnrA-like CJO92_RS05565 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS05570 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS05575 PF00005 ABC transporter CJO92_RS05580 PF07690 Major Facilitator Superfamily CJO92_RS05585 PF02682 Carboxyltransferase domain, subdomain C and D CJO92_RS05590 PF02626 Carboxyltransferase domain, subdomain A and B CJO92_RS05595 PF03746 LamB/YcsF family CJO92_RS05610 PF03480 Bacterial extracellular solute-binding protein, family 7 CJO92_RS05615 PF01470 Pyroglutamyl peptidase CJO92_RS05630 PF12706 Beta-lactamase superfamily domain CJO92_RS05640 PF04055 Radical SAM superfamily CJO92_RS05640 PF06969 HemN C-terminal domain CJO92_RS05645 PF01725 Ham1 family CJO92_RS05650 PF03725 3' exoribonuclease family, domain 2 CJO92_RS05650 PF01138 3' exoribonuclease family, domain 1 CJO92_RS05660 PF08239 Bacterial SH3 domain CJO92_RS05660 PF00069 Protein kinase domain CJO92_RS05665 PF03755 YicC-like family, N-terminal region CJO92_RS05665 PF08340 Domain of unknown function (DUF1732) CJO92_RS05670 PF00625 Guanylate kinase CJO92_RS05675 PF01192 RNA polymerase Rpb6 CJO92_RS05680 PF02824 TGS domain CJO92_RS05680 PF04607 Region found in RelA / SpoT proteins CJO92_RS05680 PF13291 ACT domain CJO92_RS05690 PF03449 Transcription elongation factor, N-terminal CJO92_RS05690 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO92_RS05715 PF01476 LysM domain CJO92_RS05715 PF04972 BON domain CJO92_RS05730 PF00437 Type II/IV secretion system protein CJO92_RS05735 PF00482 Type II secretion system (T2SS), protein F CJO92_RS05740 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS05740 PF08334 Type II secretion system (T2SS), protein G CJO92_RS05750 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS05750 PF08334 Type II secretion system (T2SS), protein G CJO92_RS05770 PF00263 Bacterial type II and III secretion system protein CJO92_RS05770 PF03958 Bacterial type II/III secretion system short domain CJO92_RS05770 PF11741 AMIN domain CJO92_RS05770 PF07660 Secretin and TonB N terminus short domain CJO92_RS05780 PF05593 RHS Repeat CJO92_RS05780 PF03527 RHS protein CJO92_RS05795 PF15631 NTF2 fold immunity protein CJO92_RS05810 PF06826 Predicted Permease Membrane Region CJO92_RS05815 PF03949 Malic enzyme, NAD binding domain CJO92_RS05815 PF00390 Malic enzyme, N-terminal domain CJO92_RS05820 PF01070 FMN-dependent dehydrogenase CJO92_RS05825 PF00158 Sigma-54 interaction domain CJO92_RS05825 PF00072 Response regulator receiver domain CJO92_RS05825 PF02954 Bacterial regulatory protein, Fis family CJO92_RS05830 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS05840 PF00890 FAD binding domain CJO92_RS05840 PF02910 Fumarate reductase flavoprotein C-term CJO92_RS05845 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJO92_RS05845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJO92_RS05845 PF10531 SLBB domain CJO92_RS05850 PF00589 Phage integrase family CJO92_RS05900 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS05910 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CJO92_RS05915 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CJO92_RS05915 PF01433 Peptidase family M1 domain CJO92_RS05915 PF11940 Domain of unknown function (DUF3458) Ig-like fold CJO92_RS05925 PF01515 Phosphate acetyl/butaryl transferase CJO92_RS05925 PF03949 Malic enzyme, NAD binding domain CJO92_RS05925 PF00390 Malic enzyme, N-terminal domain CJO92_RS05930 PF13609 Gram-negative porin CJO92_RS05935 PF09349 OHCU decarboxylase CJO92_RS05935 PF01014 Uricase CJO92_RS05945 PF01979 Amidohydrolase family CJO92_RS05950 PF00860 Permease family CJO92_RS05960 PF00576 HIUase/Transthyretin family CJO92_RS05980 PF00005 ABC transporter CJO92_RS05985 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS05990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS05995 PF01037 Lrp/AsnC ligand binding domain CJO92_RS06000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS06005 PF01042 Endoribonuclease L-PSP CJO92_RS06020 PF01169 Uncharacterized protein family UPF0016 CJO92_RS06025 PF01979 Amidohydrolase family CJO92_RS06030 PF00962 Adenosine/AMP deaminase CJO92_RS06040 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO92_RS06040 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS06045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO92_RS06045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS06045 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS06045 PF01799 [2Fe-2S] binding domain CJO92_RS06050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS06050 PF03466 LysR substrate binding domain CJO92_RS06055 PF12849 PBP superfamily domain CJO92_RS06080 PF03641 Possible lysine decarboxylase CJO92_RS06085 PF08359 YsiA-like protein, C-terminal region CJO92_RS06085 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS06090 PF01219 Prokaryotic diacylglycerol kinase CJO92_RS06095 PF13439 Glycosyltransferase Family 4 CJO92_RS06095 PF00534 Glycosyl transferases group 1 CJO92_RS06130 PF00205 Thiamine pyrophosphate enzyme, central domain CJO92_RS06130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO92_RS06130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO92_RS06135 PF10369 Small subunit of acetolactate synthase CJO92_RS06140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJO92_RS06140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJO92_RS06155 PF02666 Phosphatidylserine decarboxylase CJO92_RS06160 PF01066 CDP-alcohol phosphatidyltransferase CJO92_RS06165 PF00682 HMGL-like CJO92_RS06165 PF08502 LeuA allosteric (dimerisation) domain CJO92_RS06175 PF13458 Periplasmic binding protein CJO92_RS06180 PF00312 Ribosomal protein S15 CJO92_RS06185 PF00013 KH domain CJO92_RS06185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJO92_RS06185 PF01138 3' exoribonuclease family, domain 1 CJO92_RS06185 PF03725 3' exoribonuclease family, domain 2 CJO92_RS06185 PF00575 S1 RNA binding domain CJO92_RS06200 PF00121 Triosephosphate isomerase CJO92_RS06205 PF03840 Preprotein translocase SecG subunit CJO92_RS06215 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJO92_RS06220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJO92_RS06225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJO92_RS06230 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJO92_RS06240 PF10531 SLBB domain CJO92_RS06240 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJO92_RS06240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJO92_RS06245 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CJO92_RS06245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJO92_RS06245 PF00384 Molybdopterin oxidoreductase CJO92_RS06250 PF00146 NADH dehydrogenase CJO92_RS06255 PF12838 4Fe-4S dicluster domain CJO92_RS06260 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJO92_RS06265 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJO92_RS06270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJO92_RS06270 PF00361 Proton-conducting membrane transporter CJO92_RS06275 PF00361 Proton-conducting membrane transporter CJO92_RS06275 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CJO92_RS06280 PF00361 Proton-conducting membrane transporter CJO92_RS06300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS06300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS06300 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS06305 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS06305 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS06305 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS06310 PF01575 MaoC like domain CJO92_RS06310 PF00171 Aldehyde dehydrogenase family CJO92_RS06315 PF01575 MaoC like domain CJO92_RS06325 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS06330 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS06335 PF00005 ABC transporter CJO92_RS06335 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS06340 PF00005 ABC transporter CJO92_RS06345 PF01774 UreD urease accessory protein CJO92_RS06350 PF00547 Urease, gamma subunit CJO92_RS06355 PF04955 HupE / UreJ protein CJO92_RS06360 PF00699 Urease beta subunit CJO92_RS06365 PF00449 Urease alpha-subunit, N-terminal domain CJO92_RS06365 PF01979 Amidohydrolase family CJO92_RS06370 PF02814 UreE urease accessory protein, N-terminal domain CJO92_RS06370 PF05194 UreE urease accessory protein, C-terminal domain CJO92_RS06375 PF01730 UreF CJO92_RS06380 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO92_RS06390 PF01810 LysE type translocator CJO92_RS06405 PF00043 Glutathione S-transferase, C-terminal domain CJO92_RS06405 PF02798 Glutathione S-transferase, N-terminal domain CJO92_RS06410 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS06410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS06410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS06420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS06420 PF03466 LysR substrate binding domain CJO92_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS06425 PF03466 LysR substrate binding domain CJO92_RS06450 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS06455 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CJO92_RS06455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO92_RS06455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO92_RS06460 PF13417 Glutathione S-transferase, N-terminal domain CJO92_RS06460 PF14497 Glutathione S-transferase, C-terminal domain CJO92_RS06465 PF00155 Aminotransferase class I and II CJO92_RS06475 PF03883 Peroxide stress protein YaaA CJO92_RS06480 PF00246 Zinc carboxypeptidase CJO92_RS06480 PF18027 Cytosolic carboxypeptidase N-terminal domain CJO92_RS06490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS06505 PF00330 Aconitase family (aconitate hydratase) CJO92_RS06505 PF00694 Aconitase C-terminal domain CJO92_RS06510 PF03972 MmgE/PrpD family CJO92_RS06520 PF00285 Citrate synthase, C-terminal domain CJO92_RS06535 PF00056 lactate/malate dehydrogenase, NAD binding domain CJO92_RS06535 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJO92_RS06540 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS06540 PF00155 Aminotransferase class I and II CJO92_RS06550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJO92_RS06555 PF00890 FAD binding domain CJO92_RS06555 PF02910 Fumarate reductase flavoprotein C-term CJO92_RS06560 PF13085 2Fe-2S iron-sulfur cluster binding domain CJO92_RS06565 PF03937 Flavinator of succinate dehydrogenase CJO92_RS06570 PF00285 Citrate synthase, C-terminal domain CJO92_RS06575 PF00330 Aconitase family (aconitate hydratase) CJO92_RS06580 PF00694 Aconitase C-terminal domain CJO92_RS06585 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO92_RS06590 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO92_RS06590 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJO92_RS06600 PF01416 tRNA pseudouridine synthase CJO92_RS06605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJO92_RS06610 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS06615 PF01555 DNA methylase CJO92_RS06620 PF00290 Tryptophan synthase alpha chain CJO92_RS06625 PF01039 Carboxyl transferase domain CJO92_RS06625 PF17848 Acetyl-coA carboxylase zinc finger domain CJO92_RS06630 PF08245 Mur ligase middle domain CJO92_RS06630 PF02875 Mur ligase family, glutamate ligase domain CJO92_RS06645 PF00156 Phosphoribosyl transferase domain CJO92_RS06650 PF01061 ABC-2 type transporter CJO92_RS06685 PF03928 Haem-degrading CJO92_RS06695 PF02472 Biopolymer transport protein ExbD/TolR CJO92_RS06700 PF01618 MotA/TolQ/ExbB proton channel family CJO92_RS06710 PF01434 Peptidase family M41 CJO92_RS06710 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS06710 PF17862 AAA+ lid domain CJO92_RS06730 PF00375 Sodium:dicarboxylate symporter family CJO92_RS06735 PF01177 Asp/Glu/Hydantoin racemase CJO92_RS06745 PF03350 Uncharacterized protein family, UPF0114 CJO92_RS06750 PF00892 EamA-like transporter family CJO92_RS06755 PF16177 Acetyl-coenzyme A synthetase N-terminus CJO92_RS06755 PF00501 AMP-binding enzyme CJO92_RS06755 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS06760 PF00474 Sodium:solute symporter family CJO92_RS06770 PF01381 Helix-turn-helix CJO92_RS06790 PF05593 RHS Repeat CJO92_RS06790 PF03527 RHS protein CJO92_RS06820 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS06820 PF03472 Autoinducer binding domain CJO92_RS06825 PF00672 HAMP domain CJO92_RS06825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS06825 PF02203 Tar ligand binding domain homologue CJO92_RS06830 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS06830 PF17151 Periplasmic sensor domain CJO92_RS06845 PF01799 [2Fe-2S] binding domain CJO92_RS06845 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS06850 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS06865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS06870 PF00005 ABC transporter CJO92_RS06870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS06875 PF00005 ABC transporter CJO92_RS06875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS06880 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS06880 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO92_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS06890 PF13454 FAD-NAD(P)-binding CJO92_RS06895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS06895 PF03466 LysR substrate binding domain CJO92_RS06930 PF00551 Formyl transferase CJO92_RS06935 PF00929 Exonuclease CJO92_RS06960 PF00264 Common central domain of tyrosinase CJO92_RS06975 PF00582 Universal stress protein family CJO92_RS06980 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS06990 PF00571 CBS domain CJO92_RS07025 PF13545 Crp-like helix-turn-helix domain CJO92_RS07025 PF00027 Cyclic nucleotide-binding domain CJO92_RS07030 PF07730 Histidine kinase CJO92_RS07030 PF17200 Single Cache domain 2 CJO92_RS07035 PF00072 Response regulator receiver domain CJO92_RS07035 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS07040 PF00011 Hsp20/alpha crystallin family CJO92_RS07045 PF00075 RNase H CJO92_RS07050 PF08241 Methyltransferase domain CJO92_RS07055 PF00753 Metallo-beta-lactamase superfamily CJO92_RS07055 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJO92_RS07060 PF01476 LysM domain CJO92_RS07060 PF01464 Transglycosylase SLT domain CJO92_RS07065 PF16177 Acetyl-coenzyme A synthetase N-terminus CJO92_RS07065 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS07065 PF00501 AMP-binding enzyme CJO92_RS07070 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJO92_RS07070 PF00117 Glutamine amidotransferase class-I CJO92_RS07075 PF01810 LysE type translocator CJO92_RS07080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJO92_RS07080 PF02142 MGS-like domain CJO92_RS07080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO92_RS07085 PF03449 Transcription elongation factor, N-terminal CJO92_RS07085 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO92_RS07095 PF01985 CRS1 / YhbY (CRM) domain CJO92_RS07100 PF01728 FtsJ-like methyltransferase CJO92_RS07105 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS07105 PF01434 Peptidase family M41 CJO92_RS07105 PF17862 AAA+ lid domain CJO92_RS07105 PF06480 FtsH Extracellular CJO92_RS07110 PF00809 Pterin binding enzyme CJO92_RS07115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJO92_RS07115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJO92_RS07115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJO92_RS07115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJO92_RS07120 PF12849 PBP superfamily domain CJO92_RS07125 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS07135 PF00005 ABC transporter CJO92_RS07140 PF01895 PhoU domain CJO92_RS07145 PF00072 Response regulator receiver domain CJO92_RS07145 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS07150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS07150 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS07150 PF11808 Phosphate regulon sensor protein PhoR CJO92_RS07150 PF00989 PAS fold CJO92_RS07155 PF13090 Polyphosphate kinase C-terminal domain 2 CJO92_RS07155 PF02503 Polyphosphate kinase middle domain CJO92_RS07155 PF17941 Polyphosphate kinase C-terminal domain 1 CJO92_RS07155 PF13089 Polyphosphate kinase N-terminal domain CJO92_RS07160 PF02541 Ppx/GppA phosphatase family CJO92_RS07180 PF01925 Sulfite exporter TauE/SafE CJO92_RS07195 PF00753 Metallo-beta-lactamase superfamily CJO92_RS07200 PF13188 PAS domain CJO92_RS07200 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS07200 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS07200 PF00563 EAL domain CJO92_RS07210 PF00202 Aminotransferase class-III CJO92_RS07225 PF03699 Uncharacterised protein family (UPF0182) CJO92_RS07230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS07230 PF03466 LysR substrate binding domain CJO92_RS07240 PF08402 TOBE domain CJO92_RS07240 PF00005 ABC transporter CJO92_RS07260 PF13609 Gram-negative porin CJO92_RS07265 PF00248 Aldo/keto reductase family CJO92_RS07340 PF01565 FAD binding domain CJO92_RS07340 PF02913 FAD linked oxidases, C-terminal domain CJO92_RS07350 PF03358 NADPH-dependent FMN reductase CJO92_RS07355 PF03631 Virulence factor BrkB CJO92_RS07370 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO92_RS07380 PF07690 Major Facilitator Superfamily CJO92_RS07385 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJO92_RS07385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO92_RS07390 PF01264 Chorismate synthase CJO92_RS07405 PF00072 Response regulator receiver domain CJO92_RS07405 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS07410 PF01144 Coenzyme A transferase CJO92_RS07415 PF01144 Coenzyme A transferase CJO92_RS07420 PF00106 short chain dehydrogenase CJO92_RS07430 PF01042 Endoribonuclease L-PSP CJO92_RS07435 PF13291 ACT domain CJO92_RS07435 PF04607 Region found in RelA / SpoT proteins CJO92_RS07435 PF02824 TGS domain CJO92_RS07445 PF02824 TGS domain CJO92_RS07445 PF03129 Anticodon binding domain CJO92_RS07445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO92_RS07445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO92_RS07450 PF00707 Translation initiation factor IF-3, C-terminal domain CJO92_RS07450 PF05198 Translation initiation factor IF-3, N-terminal domain CJO92_RS07455 PF01632 Ribosomal protein L35 CJO92_RS07460 PF00453 Ribosomal protein L20 CJO92_RS07465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJO92_RS07465 PF01409 tRNA synthetases class II core domain (F) CJO92_RS07470 PF01588 Putative tRNA binding domain CJO92_RS07470 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJO92_RS07470 PF03147 Ferredoxin-fold anticodon binding domain CJO92_RS07470 PF03484 tRNA synthetase B5 domain CJO92_RS07470 PF03483 B3/4 domain CJO92_RS07475 PF00216 Bacterial DNA-binding protein CJO92_RS07510 PF11799 impB/mucB/samB family C-terminal domain CJO92_RS07510 PF00817 impB/mucB/samB family CJO92_RS07515 PF13520 Amino acid permease CJO92_RS07535 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO92_RS07540 PF01047 MarR family CJO92_RS07550 PF07969 Amidohydrolase family CJO92_RS07555 PF01432 Peptidase family M3 CJO92_RS07560 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJO92_RS07560 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJO92_RS07565 PF00072 Response regulator receiver domain CJO92_RS07565 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS07570 PF00989 PAS fold CJO92_RS07570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS07570 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS07580 PF17831 Pyruvate dehydrogenase E1 component middle domain CJO92_RS07580 PF00456 Transketolase, thiamine diphosphate binding domain CJO92_RS07585 PF02817 e3 binding domain CJO92_RS07585 PF00364 Biotin-requiring enzyme CJO92_RS07585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO92_RS07595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO92_RS07595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS07605 PF09361 Phasin protein CJO92_RS07610 PF00850 Histone deacetylase domain CJO92_RS07620 PF03061 Thioesterase superfamily CJO92_RS07625 PF00881 Nitroreductase family CJO92_RS07630 PF00768 D-alanyl-D-alanine carboxypeptidase CJO92_RS07635 PF01614 Bacterial transcriptional regulator CJO92_RS07635 PF09339 IclR helix-turn-helix domain CJO92_RS07640 PF02754 Cysteine-rich domain CJO92_RS07645 PF11870 Domain of unknown function (DUF3390) CJO92_RS07645 PF13183 4Fe-4S dicluster domain CJO92_RS07645 PF02589 LUD domain CJO92_RS07660 PF04376 Arginine-tRNA-protein transferase, N terminus CJO92_RS07660 PF04377 Arginine-tRNA-protein transferase, C terminus CJO92_RS07665 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJO92_RS07680 PF01180 Dihydroorotate dehydrogenase CJO92_RS07690 PF02705 K+ potassium transporter CJO92_RS07705 PF17674 HHH domain CJO92_RS07705 PF00575 S1 RNA binding domain CJO92_RS07705 PF09371 Tex-like protein N-terminal domain CJO92_RS07705 PF16921 Tex protein YqgF-like domain CJO92_RS07720 PF04851 Type III restriction enzyme, res subunit CJO92_RS07720 PF13307 Helicase C-terminal domain CJO92_RS07725 PF13525 Outer membrane lipoprotein CJO92_RS07730 PF00849 RNA pseudouridylate synthase CJO92_RS07730 PF01479 S4 domain CJO92_RS07735 PF02578 Multi-copper polyphenol oxidoreductase laccase CJO92_RS07745 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CJO92_RS07750 PF00108 Thiolase, N-terminal domain CJO92_RS07750 PF02803 Thiolase, C-terminal domain CJO92_RS07755 PF00106 short chain dehydrogenase CJO92_RS07760 PF07879 PHB/PHA accumulation regulator DNA-binding domain CJO92_RS07760 PF05233 PHB accumulation regulatory domain CJO92_RS07765 PF01207 Dihydrouridine synthase (Dus) CJO92_RS07770 PF04055 Radical SAM superfamily CJO92_RS07770 PF18693 TRAM domain CJO92_RS07770 PF00919 Uncharacterized protein family UPF0004 CJO92_RS07775 PF00108 Thiolase, N-terminal domain CJO92_RS07775 PF02803 Thiolase, C-terminal domain CJO92_RS07785 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO92_RS07795 PF01546 Peptidase family M20/M25/M40 CJO92_RS07795 PF07687 Peptidase dimerisation domain CJO92_RS07800 PF17757 UvrB interaction domain CJO92_RS07800 PF00271 Helicase conserved C-terminal domain CJO92_RS07800 PF00270 DEAD/DEAH box helicase CJO92_RS07800 PF02559 CarD-like/TRCF domain CJO92_RS07800 PF03461 TRCF domain CJO92_RS07805 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJO92_RS07810 PF02542 YgbB family CJO92_RS07815 PF02627 Carboxymuconolactone decarboxylase family CJO92_RS07820 PF00578 AhpC/TSA family CJO92_RS07825 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS07825 PF00672 HAMP domain CJO92_RS07830 PF00072 Response regulator receiver domain CJO92_RS07830 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS07855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS07860 PF00873 AcrB/AcrD/AcrF family CJO92_RS07875 PF01266 FAD dependent oxidoreductase CJO92_RS07875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJO92_RS07880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO92_RS07880 PF05698 Bacterial trigger factor protein (TF) C-terminus CJO92_RS07880 PF05697 Bacterial trigger factor protein (TF) CJO92_RS07885 PF00574 Clp protease CJO92_RS07890 PF07724 AAA domain (Cdc48 subfamily) CJO92_RS07890 PF10431 C-terminal, D2-small domain, of ClpB protein CJO92_RS07890 PF06689 ClpX C4-type zinc finger CJO92_RS07895 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJO92_RS07895 PF05362 Lon protease (S16) C-terminal proteolytic domain CJO92_RS07895 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS07900 PF00216 Bacterial DNA-binding protein CJO92_RS07920 PF10502 Signal peptidase, peptidase S26 CJO92_RS07925 PF13472 GDSL-like Lipase/Acylhydrolase family CJO92_RS07930 PF00005 ABC transporter CJO92_RS07935 PF00342 Phosphoglucose isomerase CJO92_RS07940 PF01256 Carbohydrate kinase CJO92_RS07950 PF02769 AIR synthase related protein, C-terminal domain CJO92_RS07950 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJO92_RS07950 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CJO92_RS07970 PF13186 Iron-sulfur cluster-binding domain CJO92_RS07970 PF04055 Radical SAM superfamily CJO92_RS07975 PF03466 LysR substrate binding domain CJO92_RS07975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS07985 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS07990 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS08000 PF00005 ABC transporter CJO92_RS08000 PF08402 TOBE domain CJO92_RS08005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS08005 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS08005 PF08521 Two-component sensor kinase N-terminal CJO92_RS08010 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS08010 PF00072 Response regulator receiver domain CJO92_RS08015 PF13609 Gram-negative porin CJO92_RS08020 PF00005 ABC transporter CJO92_RS08040 PF01722 BolA-like protein CJO92_RS08045 PF04279 Intracellular septation protein A CJO92_RS08050 PF01641 SelR domain CJO92_RS08055 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJO92_RS08060 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS08060 PF00501 AMP-binding enzyme CJO92_RS08065 PF13458 Periplasmic binding protein CJO92_RS08070 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS08080 PF00005 ABC transporter CJO92_RS08080 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS08085 PF00005 ABC transporter CJO92_RS08105 PF00324 Amino acid permease CJO92_RS08110 PF00324 Amino acid permease CJO92_RS08115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO92_RS08115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO92_RS08115 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS08120 PF00857 Isochorismatase family CJO92_RS08125 PF00108 Thiolase, N-terminal domain CJO92_RS08125 PF02803 Thiolase, C-terminal domain CJO92_RS08130 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO92_RS08130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS08130 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS08130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS08145 PF00144 Beta-lactamase CJO92_RS08150 PF00107 Zinc-binding dehydrogenase CJO92_RS08150 PF16884 N-terminal domain of oxidoreductase CJO92_RS08155 PF00596 Class II Aldolase and Adducin N-terminal domain CJO92_RS08165 PF00106 short chain dehydrogenase CJO92_RS08170 PF00561 alpha/beta hydrolase fold CJO92_RS08175 PF00465 Iron-containing alcohol dehydrogenase CJO92_RS08180 PF07859 alpha/beta hydrolase fold CJO92_RS08190 PF09500 Putative thioesterase (yiiD_Cterm) CJO92_RS08190 PF00583 Acetyltransferase (GNAT) family CJO92_RS08200 PF02378 Phosphotransferase system, EIIC CJO92_RS08215 PF01571 Aminomethyltransferase folate-binding domain CJO92_RS08220 PF02618 YceG-like family CJO92_RS08225 PF02223 Thymidylate kinase CJO92_RS08230 PF09115 DNA polymerase III, delta subunit, C terminal CJO92_RS08240 PF01026 TatD related DNase CJO92_RS08250 PF12867 DinB superfamily CJO92_RS08250 PF03781 Sulfatase-modifying factor enzyme 1 CJO92_RS08255 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS08260 PF01547 Bacterial extracellular solute-binding protein CJO92_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS08275 PF12857 TOBE-like domain CJO92_RS08275 PF17850 CysA C-terminal regulatory domain CJO92_RS08275 PF00005 ABC transporter CJO92_RS08280 PF00149 Calcineurin-like phosphoesterase CJO92_RS08295 PF00676 Dehydrogenase E1 component CJO92_RS08300 PF02780 Transketolase, C-terminal domain CJO92_RS08300 PF02779 Transketolase, pyrimidine binding domain CJO92_RS08305 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO92_RS08305 PF02817 e3 binding domain CJO92_RS08305 PF00364 Biotin-requiring enzyme CJO92_RS08325 PF01965 DJ-1/PfpI family CJO92_RS08340 PF00083 Sugar (and other) transporter CJO92_RS08360 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS08360 PF00072 Response regulator receiver domain CJO92_RS08365 PF17200 Single Cache domain 2 CJO92_RS08365 PF07730 Histidine kinase CJO92_RS08370 PF08334 Type II secretion system (T2SS), protein G CJO92_RS08370 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS08375 PF00482 Type II secretion system (T2SS), protein F CJO92_RS08380 PF00437 Type II/IV secretion system protein CJO92_RS08405 PF00263 Bacterial type II and III secretion system protein CJO92_RS08405 PF03958 Bacterial type II/III secretion system short domain CJO92_RS08410 PF08334 Type II secretion system (T2SS), protein G CJO92_RS08410 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS08415 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS08415 PF08334 Type II secretion system (T2SS), protein G CJO92_RS08430 PF00394 Multicopper oxidase CJO92_RS08430 PF07732 Multicopper oxidase CJO92_RS08465 PF01464 Transglycosylase SLT domain CJO92_RS08465 PF01551 Peptidase family M23 CJO92_RS08465 PF10145 Phage-related minor tail protein CJO92_RS08505 PF12833 Helix-turn-helix domain CJO92_RS08515 PF00501 AMP-binding enzyme CJO92_RS08515 PF00550 Phosphopantetheine attachment site CJO92_RS08515 PF08242 Methyltransferase domain CJO92_RS08515 PF00668 Condensation domain CJO92_RS08520 PF00668 Condensation domain CJO92_RS08520 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO92_RS08520 PF00698 Acyl transferase domain CJO92_RS08520 PF16197 Ketoacyl-synthetase C-terminal extension CJO92_RS08520 PF00550 Phosphopantetheine attachment site CJO92_RS08520 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO92_RS08525 PF04954 Siderophore-interacting protein CJO92_RS08525 PF00005 ABC transporter CJO92_RS08525 PF00664 ABC transporter transmembrane region CJO92_RS08525 PF08021 Siderophore-interacting FAD-binding domain CJO92_RS08530 PF00664 ABC transporter transmembrane region CJO92_RS08530 PF00005 ABC transporter CJO92_RS08530 PF08021 Siderophore-interacting FAD-binding domain CJO92_RS08530 PF04954 Siderophore-interacting protein CJO92_RS08535 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS08535 PF00593 TonB dependent receptor CJO92_RS08540 PF08242 Methyltransferase domain CJO92_RS08540 PF00668 Condensation domain CJO92_RS08540 PF00501 AMP-binding enzyme CJO92_RS08540 PF00550 Phosphopantetheine attachment site CJO92_RS08580 PF00155 Aminotransferase class I and II CJO92_RS08585 PF00202 Aminotransferase class-III CJO92_RS08595 PF00106 short chain dehydrogenase CJO92_RS08600 PF00970 Oxidoreductase FAD-binding domain CJO92_RS08600 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS08600 PF00175 Oxidoreductase NAD-binding domain CJO92_RS08605 PF00866 Ring hydroxylating beta subunit CJO92_RS08610 PF00355 Rieske [2Fe-2S] domain CJO92_RS08610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO92_RS08615 PF00775 Dioxygenase CJO92_RS08615 PF04444 Catechol dioxygenase N terminus CJO92_RS08620 PF02426 Muconolactone delta-isomerase CJO92_RS08625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO92_RS08625 PF13378 Enolase C-terminal domain-like CJO92_RS08630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS08630 PF03466 LysR substrate binding domain CJO92_RS08655 PF07690 Major Facilitator Superfamily CJO92_RS08660 PF03466 LysR substrate binding domain CJO92_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS08665 PF05981 CreA protein CJO92_RS08670 PF01799 [2Fe-2S] binding domain CJO92_RS08670 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS08675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS08675 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO92_RS08700 PF02625 XdhC and CoxI family CJO92_RS08700 PF13478 XdhC Rossmann domain CJO92_RS08705 PF07993 Male sterility protein CJO92_RS08705 PF00550 Phosphopantetheine attachment site CJO92_RS08705 PF00501 AMP-binding enzyme CJO92_RS08710 PF02308 MgtC family CJO92_RS08715 PF02203 Tar ligand binding domain homologue CJO92_RS08715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS08715 PF00672 HAMP domain CJO92_RS08725 PF00723 Glycosyl hydrolases family 15 CJO92_RS08735 PF00171 Aldehyde dehydrogenase family CJO92_RS08750 PF00005 ABC transporter CJO92_RS08750 PF12848 ABC transporter CJO92_RS08755 PF02016 LD-carboxypeptidase N-terminal domain CJO92_RS08755 PF17676 LD-carboxypeptidase C-terminal domain CJO92_RS08760 PF14437 MafB19-like deaminase CJO92_RS08765 PF01242 6-pyruvoyl tetrahydropterin synthase CJO92_RS08780 PF13657 HipA N-terminal domain CJO92_RS08780 PF07804 HipA-like C-terminal domain CJO92_RS08805 PF00775 Dioxygenase CJO92_RS08810 PF00775 Dioxygenase CJO92_RS08810 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CJO92_RS08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS08815 PF03466 LysR substrate binding domain CJO92_RS08860 PF03743 Bacterial conjugation TrbI-like protein CJO92_RS08870 PF04335 VirB8 protein CJO92_RS08890 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CJO92_RS08905 PF00437 Type II/IV secretion system protein CJO92_RS08915 PF02534 Type IV secretory system Conjugative DNA transfer CJO92_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS08925 PF03466 LysR substrate binding domain CJO92_RS08945 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS08945 PF00107 Zinc-binding dehydrogenase CJO92_RS08955 PF03358 NADPH-dependent FMN reductase CJO92_RS08960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS08960 PF03466 LysR substrate binding domain CJO92_RS08965 PF00248 Aldo/keto reductase family CJO92_RS08970 PF00107 Zinc-binding dehydrogenase CJO92_RS08970 PF13823 Alcohol dehydrogenase GroES-associated CJO92_RS08970 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS08990 PF01361 Tautomerase enzyme CJO92_RS09000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS09000 PF03466 LysR substrate binding domain CJO92_RS09015 PF10502 Signal peptidase, peptidase S26 CJO92_RS09030 PF13614 AAA domain CJO92_RS09060 PF01381 Helix-turn-helix CJO92_RS09065 PF05284 Protein of unknown function (DUF736) CJO92_RS09070 PF17762 HTH domain found in ParB protein CJO92_RS09070 PF02195 ParB-like nuclease domain CJO92_RS09075 PF06067 Domain of unknown function (DUF932) CJO92_RS09100 PF01555 DNA methylase CJO92_RS09110 PF00176 SNF2 family N-terminal domain CJO92_RS09110 PF00271 Helicase conserved C-terminal domain CJO92_RS09130 PF00589 Phage integrase family CJO92_RS09130 PF13356 Arm DNA-binding domain CJO92_RS09135 PF00117 Glutamine amidotransferase class-I CJO92_RS09135 PF00958 GMP synthase C terminal domain CJO92_RS09135 PF02540 NAD synthase CJO92_RS09145 PF00571 CBS domain CJO92_RS09145 PF00478 IMP dehydrogenase / GMP reductase domain CJO92_RS09150 PF00892 EamA-like transporter family CJO92_RS09160 PF03658 RnfH family Ubiquitin CJO92_RS09165 PF03364 Polyketide cyclase / dehydrase and lipid transport CJO92_RS09170 PF01668 SmpB protein CJO92_RS09175 PF01145 SPFH domain / Band 7 family CJO92_RS09175 PF16200 C-terminal region of band_7 CJO92_RS09185 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJO92_RS09185 PF00391 PEP-utilising enzyme, mobile domain CJO92_RS09185 PF02896 PEP-utilising enzyme, TIM barrel domain CJO92_RS09190 PF03618 Kinase/pyrophosphorylase CJO92_RS09200 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJO92_RS09200 PF00588 SpoU rRNA Methylase family CJO92_RS09205 PF01351 Ribonuclease HII CJO92_RS09210 PF02684 Lipid-A-disaccharide synthetase CJO92_RS09215 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS09215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJO92_RS09220 PF07977 FabA-like domain CJO92_RS09225 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJO92_RS09225 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS09230 PF03938 Outer membrane protein (OmpH-like) CJO92_RS09235 PF07244 Surface antigen variable number repeat CJO92_RS09235 PF01103 Surface antigen CJO92_RS09240 PF17820 PDZ domain CJO92_RS09240 PF02163 Peptidase family M50 CJO92_RS09245 PF13288 DXP reductoisomerase C-terminal domain CJO92_RS09245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJO92_RS09245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJO92_RS09255 PF01255 Putative undecaprenyl diphosphate synthase CJO92_RS09260 PF01765 Ribosome recycling factor CJO92_RS09265 PF00696 Amino acid kinase family CJO92_RS09270 PF00889 Elongation factor TS CJO92_RS09275 PF00318 Ribosomal protein S2 CJO92_RS09280 PF00557 Metallopeptidase family M24 CJO92_RS09285 PF08335 GlnD PII-uridylyltransferase CJO92_RS09285 PF01909 Nucleotidyltransferase domain CJO92_RS09285 PF01966 HD domain CJO92_RS09290 PF00849 RNA pseudouridylate synthase CJO92_RS09290 PF01479 S4 domain CJO92_RS09300 PF01327 Polypeptide deformylase CJO92_RS09305 PF01653 NAD-dependent DNA ligase adenylation domain CJO92_RS09305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJO92_RS09305 PF03120 NAD-dependent DNA ligase OB-fold domain CJO92_RS09305 PF00533 BRCA1 C Terminus (BRCT) domain CJO92_RS09305 PF12826 Helix-hairpin-helix motif CJO92_RS09315 PF02463 RecF/RecN/SMC N terminal domain CJO92_RS09315 PF06470 SMC proteins Flexible Hinge Domain CJO92_RS09320 PF00561 alpha/beta hydrolase fold CJO92_RS09330 PF00155 Aminotransferase class I and II CJO92_RS09335 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJO92_RS09335 PF14602 Hexapeptide repeat of succinyl-transferase CJO92_RS09335 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS09345 PF03960 ArsC family CJO92_RS09350 PF07687 Peptidase dimerisation domain CJO92_RS09350 PF01546 Peptidase family M20/M25/M40 CJO92_RS09360 PF05175 Methyltransferase small domain CJO92_RS09380 PF00873 AcrB/AcrD/AcrF family CJO92_RS09395 PF03576 Peptidase family S58 CJO92_RS09400 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09400 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO92_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS09415 PF00005 ABC transporter CJO92_RS09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS09420 PF01112 Asparaginase CJO92_RS09430 PF00005 ABC transporter CJO92_RS09430 PF12848 ABC transporter CJO92_RS09435 PF02515 CoA-transferase family III CJO92_RS09445 PF02600 Disulfide bond formation protein DsbB CJO92_RS09450 PF18073 Rubredoxin metal binding domain CJO92_RS09455 PF00842 Alanine racemase, C-terminal domain CJO92_RS09455 PF01168 Alanine racemase, N-terminal domain CJO92_RS09460 PF07690 Major Facilitator Superfamily CJO92_RS09465 PF03167 Uracil DNA glycosylase superfamily CJO92_RS09470 PF00583 Acetyltransferase (GNAT) family CJO92_RS09475 PF00814 Glycoprotease family CJO92_RS09490 PF01274 Malate synthase CJO92_RS09505 PF03466 LysR substrate binding domain CJO92_RS09505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS09515 PF00463 Isocitrate lyase family CJO92_RS09535 PF03737 Aldolase/RraA CJO92_RS09540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO92_RS09540 PF00205 Thiamine pyrophosphate enzyme, central domain CJO92_RS09540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO92_RS09545 PF04397 LytTr DNA-binding domain CJO92_RS09545 PF00072 Response regulator receiver domain CJO92_RS09550 PF06580 Histidine kinase CJO92_RS09550 PF07694 5TMR of 5TMR-LYT CJO92_RS09565 PF03466 LysR substrate binding domain CJO92_RS09565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS09570 PF17850 CysA C-terminal regulatory domain CJO92_RS09570 PF00005 ABC transporter CJO92_RS09570 PF12857 TOBE-like domain CJO92_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09580 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09595 PF03459 TOBE domain CJO92_RS09600 PF00005 ABC transporter CJO92_RS09605 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09610 PF00296 Luciferase-like monooxygenase CJO92_RS09615 PF09084 NMT1/THI5 like CJO92_RS09620 PF03358 NADPH-dependent FMN reductase CJO92_RS09630 PF17871 AAA lid domain CJO92_RS09630 PF02861 Clp amino terminal domain, pathogenicity island component CJO92_RS09630 PF10431 C-terminal, D2-small domain, of ClpB protein CJO92_RS09630 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS09630 PF07724 AAA domain (Cdc48 subfamily) CJO92_RS09635 PF10605 3HB-oligomer hydrolase (3HBOH) CJO92_RS09640 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJO92_RS09645 PF02391 MoaE protein CJO92_RS09650 PF02597 ThiS family CJO92_RS09655 PF03454 MoeA C-terminal region (domain IV) CJO92_RS09655 PF00994 Probable molybdopterin binding domain CJO92_RS09655 PF03453 MoeA N-terminal region (domain I and II) CJO92_RS09660 PF03167 Uracil DNA glycosylase superfamily CJO92_RS09665 PF14821 Threonine synthase N terminus CJO92_RS09665 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS09670 PF03447 Homoserine dehydrogenase, NAD binding domain CJO92_RS09670 PF00742 Homoserine dehydrogenase CJO92_RS09670 PF01842 ACT domain CJO92_RS09675 PF00155 Aminotransferase class I and II CJO92_RS09685 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJO92_RS09690 PF00892 EamA-like transporter family CJO92_RS09695 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJO92_RS09700 PF00535 Glycosyl transferase family 2 CJO92_RS09705 PF00551 Formyl transferase CJO92_RS09705 PF01370 NAD dependent epimerase/dehydratase family CJO92_RS09705 PF02911 Formyl transferase, C-terminal domain CJO92_RS09710 PF01370 NAD dependent epimerase/dehydratase family CJO92_RS09710 PF02911 Formyl transferase, C-terminal domain CJO92_RS09710 PF00551 Formyl transferase CJO92_RS09715 PF01522 Polysaccharide deacetylase CJO92_RS09720 PF00578 AhpC/TSA family CJO92_RS09725 PF13638 PIN domain CJO92_RS09725 PF02562 PhoH-like protein CJO92_RS09735 PF00877 NlpC/P60 family CJO92_RS09740 PF01384 Phosphate transporter family CJO92_RS09750 PF03796 DnaB-like helicase C terminal domain CJO92_RS09750 PF00772 DnaB-like helicase N terminal domain CJO92_RS09755 PF01281 Ribosomal protein L9, N-terminal domain CJO92_RS09755 PF03948 Ribosomal protein L9, C-terminal domain CJO92_RS09760 PF01084 Ribosomal protein S18 CJO92_RS09770 PF01250 Ribosomal protein S6 CJO92_RS09775 PF00710 Asparaginase, N-terminal CJO92_RS09775 PF17763 Glutaminase/Asparaginase C-terminal domain CJO92_RS09780 PF00970 Oxidoreductase FAD-binding domain CJO92_RS09780 PF00175 Oxidoreductase NAD-binding domain CJO92_RS09785 PF01726 LexA DNA binding domain CJO92_RS09785 PF00717 Peptidase S24-like CJO92_RS09805 PF07687 Peptidase dimerisation domain CJO92_RS09805 PF01546 Peptidase family M20/M25/M40 CJO92_RS09820 PF01207 Dihydrouridine synthase (Dus) CJO92_RS09825 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS09830 PF00009 Elongation factor Tu GTP binding domain CJO92_RS09830 PF03144 Elongation factor Tu domain 2 CJO92_RS09830 PF00679 Elongation factor G C-terminus CJO92_RS09835 PF01047 MarR family CJO92_RS09840 PF02321 Outer membrane efflux protein CJO92_RS09845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS09845 PF00529 HlyD membrane-fusion protein of T1SS CJO92_RS09850 PF07690 Major Facilitator Superfamily CJO92_RS09855 PF09157 Pseudouridine synthase II TruB, C-terminal CJO92_RS09855 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJO92_RS09855 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJO92_RS09860 PF02033 Ribosome-binding factor A CJO92_RS09865 PF08364 Bacterial translation initiation factor IF-2 associated region CJO92_RS09865 PF11987 Translation-initiation factor 2 CJO92_RS09865 PF04760 Translation initiation factor IF-2, N-terminal region CJO92_RS09865 PF00009 Elongation factor Tu GTP binding domain CJO92_RS09870 PF13184 NusA-like KH domain CJO92_RS09870 PF08529 NusA N-terminal domain CJO92_RS09875 PF02576 RimP N-terminal domain CJO92_RS09875 PF17384 RimP C-terminal SH3 domain CJO92_RS09880 PF01479 S4 domain CJO92_RS09880 PF00849 RNA pseudouridylate synthase CJO92_RS09885 PF04079 Segregation and condensation complex subunit ScpB CJO92_RS09895 PF00027 Cyclic nucleotide-binding domain CJO92_RS09895 PF13545 Crp-like helix-turn-helix domain CJO92_RS09910 PF12801 4Fe-4S binding domain CJO92_RS09910 PF13746 4Fe-4S dicluster domain CJO92_RS09910 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CJO92_RS09915 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CJO92_RS09915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO92_RS09930 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO92_RS09940 PF00403 Heavy-metal-associated domain CJO92_RS09950 PF03969 AFG1-like ATPase CJO92_RS09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS09955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO92_RS09960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO92_RS09960 PF00364 Biotin-requiring enzyme CJO92_RS09960 PF02817 e3 binding domain CJO92_RS09965 PF16870 2-oxoglutarate dehydrogenase C-terminal CJO92_RS09965 PF02779 Transketolase, pyrimidine binding domain CJO92_RS09965 PF00676 Dehydrogenase E1 component CJO92_RS09965 PF16078 2-oxoglutarate dehydrogenase N-terminus CJO92_RS09970 PF03009 Glycerophosphoryl diester phosphodiesterase family CJO92_RS09975 PF00005 ABC transporter CJO92_RS09975 PF17912 MalK OB fold domain CJO92_RS09980 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09985 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS09990 PF13416 Bacterial extracellular solute-binding protein CJO92_RS10005 PF00158 Sigma-54 interaction domain CJO92_RS10005 PF02954 Bacterial regulatory protein, Fis family CJO92_RS10005 PF00072 Response regulator receiver domain CJO92_RS10010 PF00989 PAS fold CJO92_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS10010 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS10020 PF03951 Glutamine synthetase, beta-Grasp domain CJO92_RS10020 PF00120 Glutamine synthetase, catalytic domain CJO92_RS10030 PF00994 Probable molybdopterin binding domain CJO92_RS10030 PF02464 Competence-damaged protein CJO92_RS10030 PF18146 Damage-inducible protein CinA KH domain CJO92_RS10055 PF04408 Helicase associated domain (HA2) CJO92_RS10055 PF11898 Domain of unknown function (DUF3418) CJO92_RS10055 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CJO92_RS10055 PF00270 DEAD/DEAH box helicase CJO92_RS10055 PF00271 Helicase conserved C-terminal domain CJO92_RS10060 PF00696 Amino acid kinase family CJO92_RS10060 PF00583 Acetyltransferase (GNAT) family CJO92_RS10065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO92_RS10065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO92_RS10070 PF01261 Xylose isomerase-like TIM barrel CJO92_RS10075 PF04962 KduI/IolB family CJO92_RS10080 PF01261 Xylose isomerase-like TIM barrel CJO92_RS10085 PF00205 Thiamine pyrophosphate enzyme, central domain CJO92_RS10085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO92_RS10085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO92_RS10090 PF00294 pfkB family carbohydrate kinase CJO92_RS10095 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS10100 PF00005 ABC transporter CJO92_RS10105 PF13407 Periplasmic binding protein domain CJO92_RS10120 PF00355 Rieske [2Fe-2S] domain CJO92_RS10145 PF14759 Reductase C-terminal CJO92_RS10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS10150 PF01418 Helix-turn-helix domain, rpiR family CJO92_RS10150 PF01380 SIS domain CJO92_RS10155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO92_RS10155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO92_RS10160 PF04362 Bacterial Fe(2+) trafficking CJO92_RS10165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS10165 PF02203 Tar ligand binding domain homologue CJO92_RS10165 PF00672 HAMP domain CJO92_RS10170 PF01979 Amidohydrolase family CJO92_RS10175 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CJO92_RS10180 PF01180 Dihydroorotate dehydrogenase CJO92_RS10185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO92_RS10185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS10190 PF01546 Peptidase family M20/M25/M40 CJO92_RS10190 PF07687 Peptidase dimerisation domain CJO92_RS10195 PF08362 YcdC-like protein, C-terminal region CJO92_RS10195 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS10200 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJO92_RS10205 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJO92_RS10210 PF02146 Sir2 family CJO92_RS10215 PF00588 SpoU rRNA Methylase family CJO92_RS10215 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJO92_RS10220 PF00773 RNB domain CJO92_RS10220 PF00575 S1 RNA binding domain CJO92_RS10220 PF08206 Ribonuclease B OB domain CJO92_RS10220 PF08461 Ribonuclease R winged-helix domain CJO92_RS10220 PF17876 Cold shock domain CJO92_RS10230 PF00156 Phosphoribosyl transferase domain CJO92_RS10235 PF00709 Adenylosuccinate synthetase CJO92_RS10240 PF13393 Histidyl-tRNA synthetase CJO92_RS10250 PF01145 SPFH domain / Band 7 family CJO92_RS10255 PF12221 Bacterial membrane protein N terminal CJO92_RS10255 PF01145 SPFH domain / Band 7 family CJO92_RS10260 PF01926 50S ribosome-binding GTPase CJO92_RS10260 PF13167 GTP-binding GTPase N-terminal CJO92_RS10260 PF16360 GTP-binding GTPase Middle Region CJO92_RS10265 PF17209 Hfq protein CJO92_RS10270 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJO92_RS10270 PF01926 50S ribosome-binding GTPase CJO92_RS10275 PF13360 PQQ-like domain CJO92_RS10280 PF09976 Tetratricopeptide repeat-like domain CJO92_RS10285 PF03129 Anticodon binding domain CJO92_RS10285 PF13393 Histidyl-tRNA synthetase CJO92_RS10290 PF04551 GcpE protein CJO92_RS10305 PF04055 Radical SAM superfamily CJO92_RS10310 PF00334 Nucleoside diphosphate kinase CJO92_RS10315 PF01027 Inhibitor of apoptosis-promoting Bax1 CJO92_RS10320 PF05958 tRNA (Uracil-5-)-methyltransferase CJO92_RS10320 PF01938 TRAM domain CJO92_RS10330 PF00140 Sigma-70 factor, region 1.2 CJO92_RS10330 PF04542 Sigma-70 region 2 CJO92_RS10330 PF04539 Sigma-70 region 3 CJO92_RS10330 PF04545 Sigma-70, region 4 CJO92_RS10335 PF01476 LysM domain CJO92_RS10335 PF01551 Peptidase family M23 CJO92_RS10345 PF01975 Survival protein SurE CJO92_RS10350 PF16197 Ketoacyl-synthetase C-terminal extension CJO92_RS10350 PF00698 Acyl transferase domain CJO92_RS10350 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO92_RS10350 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS10350 PF00550 Phosphopantetheine attachment site CJO92_RS10350 PF14765 Polyketide synthase dehydratase CJO92_RS10350 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO92_RS10350 PF08659 KR domain CJO92_RS10350 PF08990 Erythronolide synthase docking CJO92_RS10355 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO92_RS10360 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS10360 PF16925 Tetracyclin repressor-like, C-terminal domain CJO92_RS10365 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS10370 PF00005 ABC transporter CJO92_RS10380 PF02515 CoA-transferase family III CJO92_RS10395 PF13662 Toprim domain CJO92_RS10395 PF02132 RecR protein CJO92_RS10400 PF03992 Antibiotic biosynthesis monooxygenase CJO92_RS10405 PF02575 YbaB/EbfC DNA-binding family CJO92_RS10410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJO92_RS10410 PF12169 DNA polymerase III subunits gamma and tau domain III CJO92_RS10410 PF12170 DNA polymerase III tau subunit V interacting with alpha CJO92_RS10420 PF12705 PD-(D/E)XK nuclease superfamily CJO92_RS10420 PF00580 UvrD/REP helicase N-terminal domain CJO92_RS10420 PF13361 UvrD-like helicase C-terminal domain CJO92_RS10430 PF00085 Thioredoxin CJO92_RS10435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO92_RS10435 PF07497 Rho termination factor, RNA-binding domain CJO92_RS10435 PF07498 Rho termination factor, N-terminal domain CJO92_RS10440 PF02954 Bacterial regulatory protein, Fis family CJO92_RS10440 PF00158 Sigma-54 interaction domain CJO92_RS10440 PF00072 Response regulator receiver domain CJO92_RS10445 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS10445 PF00072 Response regulator receiver domain CJO92_RS10450 PF06167 Glucose-regulated metallo-peptidase M90 CJO92_RS10460 PF01197 Ribosomal protein L31 CJO92_RS10470 PF01554 MatE CJO92_RS10505 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO92_RS10510 PF01734 Patatin-like phospholipase CJO92_RS10515 PF00877 NlpC/P60 family CJO92_RS10520 PF00005 ABC transporter CJO92_RS10520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS10525 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS10525 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO92_RS10530 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS10535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS10550 PF13840 ACT domain CJO92_RS10550 PF00696 Amino acid kinase family CJO92_RS10550 PF01842 ACT domain CJO92_RS10555 PF09179 TilS substrate binding domain CJO92_RS10555 PF01171 PP-loop family CJO92_RS10555 PF11734 TilS substrate C-terminal domain CJO92_RS10560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJO92_RS10565 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO92_RS10570 PF01406 tRNA synthetases class I (C) catalytic domain CJO92_RS10570 PF09190 DALR domain CJO92_RS10580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO92_RS10585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO92_RS10590 PF00149 Calcineurin-like phosphoesterase CJO92_RS10595 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS10600 PF00588 SpoU rRNA Methylase family CJO92_RS10605 PF00459 Inositol monophosphatase family CJO92_RS10610 PF01381 Helix-turn-helix CJO92_RS10610 PF08671 Anti-repressor SinI CJO92_RS10615 PF00117 Glutamine amidotransferase class-I CJO92_RS10620 PF03473 MOSC domain CJO92_RS10620 PF03475 3-alpha domain CJO92_RS10625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS10625 PF00672 HAMP domain CJO92_RS10625 PF02203 Tar ligand binding domain homologue CJO92_RS10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS10630 PF08269 Cache domain CJO92_RS10640 PF01624 MutS domain I CJO92_RS10640 PF05190 MutS family domain IV CJO92_RS10640 PF05192 MutS domain III CJO92_RS10640 PF00488 MutS domain V CJO92_RS10640 PF05188 MutS domain II CJO92_RS10650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO92_RS10655 PF08007 Cupin superfamily protein CJO92_RS10660 PF03099 Biotin/lipoate A/B protein ligase family CJO92_RS10660 PF12706 Beta-lactamase superfamily domain CJO92_RS10665 PF06804 NlpB/DapX lipoprotein CJO92_RS10670 PF00701 Dihydrodipicolinate synthetase family CJO92_RS10680 PF00579 tRNA synthetases class I (W and Y) CJO92_RS10685 PF02163 Peptidase family M50 CJO92_RS10690 PF01300 Telomere recombination CJO92_RS10695 PF02811 PHP domain CJO92_RS10700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS10715 PF04134 Protein of unknown function, DUF393 CJO92_RS10720 PF00561 alpha/beta hydrolase fold CJO92_RS10725 PF04305 Protein of unknown function (DUF455) CJO92_RS10730 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS10735 PF01430 Hsp33 protein CJO92_RS10745 PF04977 Septum formation initiator CJO92_RS10750 PF00113 Enolase, C-terminal TIM barrel domain CJO92_RS10750 PF03952 Enolase, N-terminal domain CJO92_RS10760 PF00793 DAHP synthetase I family CJO92_RS10765 PF00117 Glutamine amidotransferase class-I CJO92_RS10765 PF06418 CTP synthase N-terminus CJO92_RS10770 PF00561 alpha/beta hydrolase fold CJO92_RS10770 PF08386 TAP-like protein CJO92_RS10780 PF01841 Transglutaminase-like superfamily CJO92_RS10780 PF08379 Bacterial transglutaminase-like N-terminal region CJO92_RS10790 PF14403 Circularly permuted ATP-grasp type 2 CJO92_RS10795 PF03772 Competence protein CJO92_RS10795 PF00753 Metallo-beta-lactamase superfamily CJO92_RS10800 PF01026 TatD related DNase CJO92_RS10805 PF00005 ABC transporter CJO92_RS10810 PF12704 MacB-like periplasmic core domain CJO92_RS10810 PF02687 FtsX-like permease family CJO92_RS10820 PF02272 DHHA1 domain CJO92_RS10820 PF01368 DHH family CJO92_RS10820 PF17768 RecJ OB domain CJO92_RS10825 PF00037 4Fe-4S binding domain CJO92_RS10825 PF11953 Domain of unknown function (DUF3470) CJO92_RS10850 PF03601 Conserved hypothetical protein 698 CJO92_RS10855 PF03466 LysR substrate binding domain CJO92_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS10900 PF06715 Gp5 C-terminal repeat (3 copies) CJO92_RS10900 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS10980 PF00174 Oxidoreductase molybdopterin binding domain CJO92_RS10985 PF01292 Prokaryotic cytochrome b561 CJO92_RS11005 PF00775 Dioxygenase CJO92_RS11005 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CJO92_RS11015 PF05088 Bacterial NAD-glutamate dehydrogenase CJO92_RS11030 PF01381 Helix-turn-helix CJO92_RS11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS11040 PF03466 LysR substrate binding domain CJO92_RS11045 PF07690 Major Facilitator Superfamily CJO92_RS11050 PF03466 LysR substrate binding domain CJO92_RS11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS11055 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS11055 PF00175 Oxidoreductase NAD-binding domain CJO92_RS11055 PF00970 Oxidoreductase FAD-binding domain CJO92_RS11060 PF00355 Rieske [2Fe-2S] domain CJO92_RS11060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO92_RS11065 PF13577 SnoaL-like domain CJO92_RS11070 PF00355 Rieske [2Fe-2S] domain CJO92_RS11075 PF07883 Cupin domain CJO92_RS11080 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO92_RS11085 PF13417 Glutathione S-transferase, N-terminal domain CJO92_RS11090 PF13609 Gram-negative porin CJO92_RS11100 PF13609 Gram-negative porin CJO92_RS11105 PF16338 Domain of unknown function (DUF4968) CJO92_RS11105 PF17137 Domain of unknown function (DUF5110) CJO92_RS11105 PF01055 Glycosyl hydrolases family 31 CJO92_RS11105 PF13802 Galactose mutarotase-like CJO92_RS11110 PF07690 Major Facilitator Superfamily CJO92_RS11115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO92_RS11115 PF13378 Enolase C-terminal domain-like CJO92_RS11120 PF07729 FCD domain CJO92_RS11120 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS11130 PF00072 Response regulator receiver domain CJO92_RS11130 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS11140 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS11140 PF00989 PAS fold CJO92_RS11140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS11140 PF16736 Single Cache-like CJO92_RS11150 PF00072 Response regulator receiver domain CJO92_RS11150 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS11170 PF01066 CDP-alcohol phosphatidyltransferase CJO92_RS11175 PF01541 GIY-YIG catalytic domain CJO92_RS11175 PF02151 UvrB/uvrC motif CJO92_RS11175 PF08459 UvrC Helix-hairpin-helix N-terminal CJO92_RS11185 PF09285 Elongation factor P, C-terminal CJO92_RS11185 PF08207 Elongation factor P (EF-P) KOW-like domain CJO92_RS11185 PF01132 Elongation factor P (EF-P) OB domain CJO92_RS11190 PF00933 Glycosyl hydrolase family 3 N terminal domain CJO92_RS11195 PF01648 4'-phosphopantetheinyl transferase superfamily CJO92_RS11200 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJO92_RS11205 PF11967 Recombination protein O N terminal CJO92_RS11205 PF02565 Recombination protein O C terminal CJO92_RS11210 PF07650 KH domain CJO92_RS11210 PF01926 50S ribosome-binding GTPase CJO92_RS11215 PF14622 Ribonuclease-III-like CJO92_RS11215 PF00035 Double-stranded RNA binding motif CJO92_RS11225 PF10502 Signal peptidase, peptidase S26 CJO92_RS11230 PF06421 GTP-binding protein LepA C-terminus CJO92_RS11230 PF03144 Elongation factor Tu domain 2 CJO92_RS11230 PF00679 Elongation factor G C-terminus CJO92_RS11230 PF00009 Elongation factor Tu GTP binding domain CJO92_RS11240 PF17820 PDZ domain CJO92_RS11240 PF13180 PDZ domain CJO92_RS11255 PF04542 Sigma-70 region 2 CJO92_RS11255 PF08281 Sigma-70, region 4 CJO92_RS11265 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO92_RS11265 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO92_RS11270 PF00550 Phosphopantetheine attachment site CJO92_RS11280 PF00698 Acyl transferase domain CJO92_RS11285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO92_RS11285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJO92_RS11290 PF02504 Fatty acid synthesis protein CJO92_RS11295 PF01783 Ribosomal L32p protein family CJO92_RS11300 PF02620 Large ribosomal RNA subunit accumulation protein YceD CJO92_RS11305 PF02545 Maf-like protein CJO92_RS11310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS11315 PF01343 Peptidase family S49 CJO92_RS11315 PF06965 Na+/H+ antiporter 1 CJO92_RS11325 PF13419 Haloacid dehalogenase-like hydrolase CJO92_RS11330 PF00849 RNA pseudouridylate synthase CJO92_RS11330 PF01479 S4 domain CJO92_RS11335 PF10150 Ribonuclease E/G family CJO92_RS11335 PF12111 Polyribonucleotide phosphorylase C terminal CJO92_RS11335 PF00575 S1 RNA binding domain CJO92_RS11340 PF04055 Radical SAM superfamily CJO92_RS11340 PF06463 Molybdenum Cofactor Synthesis C CJO92_RS11345 PF12804 MobA-like NTP transferase domain CJO92_RS11350 PF00994 Probable molybdopterin binding domain CJO92_RS11350 PF03454 MoeA C-terminal region (domain IV) CJO92_RS11350 PF03453 MoeA N-terminal region (domain I and II) CJO92_RS11360 PF02646 RmuC family CJO92_RS11365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO92_RS11365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS11375 PF02589 LUD domain CJO92_RS11380 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CJO92_RS11380 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CJO92_RS11390 PF00106 short chain dehydrogenase CJO92_RS11395 PF00152 tRNA synthetases class II (D, K and N) CJO92_RS11395 PF01336 OB-fold nucleic acid binding domain CJO92_RS11405 PF04384 Iron-sulphur cluster assembly CJO92_RS11410 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS11415 PF00012 Hsp70 protein CJO92_RS11420 PF00226 DnaJ domain CJO92_RS11420 PF07743 HSCB C-terminal oligomerisation domain CJO92_RS11430 PF01521 Iron-sulphur cluster biosynthesis CJO92_RS11435 PF01592 NifU-like N terminal domain CJO92_RS11440 PF00266 Aminotransferase class-V CJO92_RS11445 PF02082 Transcriptional regulator CJO92_RS11450 PF13407 Periplasmic binding protein domain CJO92_RS11455 PF00005 ABC transporter CJO92_RS11460 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS11465 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS11470 PF00294 pfkB family carbohydrate kinase CJO92_RS11480 PF00271 Helicase conserved C-terminal domain CJO92_RS11480 PF04851 Type III restriction enzyme, res subunit CJO92_RS11480 PF02151 UvrB/uvrC motif CJO92_RS11480 PF17757 UvrB interaction domain CJO92_RS11480 PF12344 Ultra-violet resistance protein B CJO92_RS11485 PF00155 Aminotransferase class I and II CJO92_RS11495 PF17938 Tetracyclin repressor-like, C-terminal domain CJO92_RS11495 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS11500 PF04060 Putative Fe-S cluster CJO92_RS11505 PF10576 Iron-sulfur binding domain of endonuclease III CJO92_RS11505 PF00633 Helix-hairpin-helix motif CJO92_RS11505 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO92_RS11510 PF00881 Nitroreductase family CJO92_RS11530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO92_RS11535 PF00034 Cytochrome c CJO92_RS11540 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS11540 PF01434 Peptidase family M41 CJO92_RS11540 PF17862 AAA+ lid domain CJO92_RS11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS11605 PF00183 Hsp90 protein CJO92_RS11610 PF00155 Aminotransferase class I and II CJO92_RS11620 PF00892 EamA-like transporter family CJO92_RS11630 PF00155 Aminotransferase class I and II CJO92_RS11635 PF00043 Glutathione S-transferase, C-terminal domain CJO92_RS11635 PF13417 Glutathione S-transferase, N-terminal domain CJO92_RS11650 PF01734 Patatin-like phospholipase CJO92_RS11655 PF02652 L-lactate permease CJO92_RS11680 PF00521 DNA gyrase/topoisomerase IV, subunit A CJO92_RS11685 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJO92_RS11685 PF01464 Transglycosylase SLT domain CJO92_RS11690 PF00204 DNA gyrase B CJO92_RS11690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS11690 PF01751 Toprim domain CJO92_RS11690 PF00986 DNA gyrase B subunit, carboxyl terminus CJO92_RS11695 PF16326 ABC transporter C-terminal domain CJO92_RS11695 PF12848 ABC transporter CJO92_RS11695 PF00005 ABC transporter CJO92_RS11705 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS11720 PF00654 Voltage gated chloride channel CJO92_RS11730 PF00589 Phage integrase family CJO92_RS11730 PF13356 Arm DNA-binding domain CJO92_RS11815 PF00271 Helicase conserved C-terminal domain CJO92_RS11815 PF00270 DEAD/DEAH box helicase CJO92_RS11820 PF12867 DinB superfamily CJO92_RS11820 PF03781 Sulfatase-modifying factor enzyme 1 CJO92_RS11825 PF10017 Histidine-specific methyltransferase, SAM-dependent CJO92_RS11835 PF03741 Integral membrane protein TerC family CJO92_RS11840 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS11845 PF00303 Thymidylate synthase CJO92_RS11850 PF00186 Dihydrofolate reductase CJO92_RS11855 PF01523 Putative modulator of DNA gyrase CJO92_RS11860 PF04751 Protein of unknown function (DUF615) CJO92_RS11865 PF00994 Probable molybdopterin binding domain CJO92_RS11870 PF00929 Exonuclease CJO92_RS11875 PF01435 Peptidase family M48 CJO92_RS11880 PF03193 RsgA GTPase CJO92_RS11890 PF17113 Regulatory signalling modulator protein AmpE CJO92_RS11890 PF03186 CobD/Cbib protein CJO92_RS11895 PF00293 NUDIX domain CJO92_RS11900 PF01245 Ribosomal protein L19 CJO92_RS11905 PF01746 tRNA (Guanine-1)-methyltransferase CJO92_RS11910 PF05239 PRC-barrel domain CJO92_RS11910 PF01782 RimM N-terminal domain CJO92_RS11915 PF00886 Ribosomal protein S16 CJO92_RS11920 PF07995 Glucose / Sorbosone dehydrogenase CJO92_RS11940 PF04055 Radical SAM superfamily CJO92_RS11945 PF01037 Lrp/AsnC ligand binding domain CJO92_RS11950 PF01266 FAD dependent oxidoreductase CJO92_RS11955 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS11955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS11955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS11955 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO92_RS11960 PF01012 Electron transfer flavoprotein domain CJO92_RS11960 PF00766 Electron transfer flavoprotein FAD-binding domain CJO92_RS11965 PF01012 Electron transfer flavoprotein domain CJO92_RS11970 PF03180 NLPA lipoprotein CJO92_RS11975 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS11980 PF00005 ABC transporter CJO92_RS11980 PF09383 NIL domain CJO92_RS11985 PF00850 Histone deacetylase domain CJO92_RS11990 PF13406 Transglycosylase SLT domain CJO92_RS11995 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS12005 PF01370 NAD dependent epimerase/dehydratase family CJO92_RS12010 PF00294 pfkB family carbohydrate kinase CJO92_RS12015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO92_RS12015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO92_RS12015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO92_RS12020 PF18073 Rubredoxin metal binding domain CJO92_RS12030 PF00216 Bacterial DNA-binding protein CJO92_RS12035 PF00575 S1 RNA binding domain CJO92_RS12040 PF02224 Cytidylate kinase CJO92_RS12045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJO92_RS12050 PF01842 ACT domain CJO92_RS12050 PF02153 Prephenate dehydrogenase CJO92_RS12055 PF00155 Aminotransferase class I and II CJO92_RS12060 PF01817 Chorismate mutase type II CJO92_RS12060 PF00800 Prephenate dehydratase CJO92_RS12060 PF01842 ACT domain CJO92_RS12065 PF00266 Aminotransferase class-V CJO92_RS12075 PF03989 DNA gyrase C-terminal domain, beta-propeller CJO92_RS12075 PF00521 DNA gyrase/topoisomerase IV, subunit A CJO92_RS12080 PF00691 OmpA family CJO92_RS12095 PF13419 Haloacid dehalogenase-like hydrolase CJO92_RS12115 PF00239 Resolvase, N terminal domain CJO92_RS12115 PF02796 Helix-turn-helix domain of resolvase CJO92_RS12150 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO92_RS12150 PF17287 POTRA domain CJO92_RS12150 PF08479 POTRA domain, ShlB-type CJO92_RS12160 PF13332 Hemagglutinin repeat CJO92_RS12160 PF04829 Pre-toxin domain with VENN motif CJO92_RS12160 PF05860 haemagglutination activity domain CJO92_RS12160 PF13332 Hemagglutinin repeat CJO92_RS12160 PF05860 haemagglutination activity domain CJO92_RS12160 PF04829 Pre-toxin domain with VENN motif CJO92_RS12245 PF00816 H-NS histone family CJO92_RS12350 PF01555 DNA methylase CJO92_RS12350 PF18755 Restriction Enzyme Adenine Methylase Associated CJO92_RS12355 PF01555 DNA methylase CJO92_RS12420 PF06441 Epoxide hydrolase N terminus CJO92_RS12440 PF07690 Major Facilitator Superfamily CJO92_RS12540 PF00041 Fibronectin type III domain CJO92_RS12540 PF00553 Cellulose binding domain CJO92_RS12540 PF01341 Glycosyl hydrolases family 6 CJO92_RS12600 PF03330 Lytic transglycolase CJO92_RS12605 PF00043 Glutathione S-transferase, C-terminal domain CJO92_RS12605 PF02798 Glutathione S-transferase, N-terminal domain CJO92_RS12610 PF01638 HxlR-like helix-turn-helix CJO92_RS12640 PF01206 Sulfurtransferase TusA CJO92_RS12645 PF00293 NUDIX domain CJO92_RS12645 PF13344 Haloacid dehalogenase-like hydrolase CJO92_RS12650 PF01212 Beta-eliminating lyase CJO92_RS12655 PF01361 Tautomerase enzyme CJO92_RS12660 PF00596 Class II Aldolase and Adducin N-terminal domain CJO92_RS12665 PF06779 Uncharacterised MFS-type transporter YbfB CJO92_RS12670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS12670 PF03466 LysR substrate binding domain CJO92_RS12680 PF01145 SPFH domain / Band 7 family CJO92_RS12690 PF00593 TonB dependent receptor CJO92_RS12690 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS12705 PF02384 N-6 DNA Methylase CJO92_RS12705 PF12161 HsdM N-terminal domain CJO92_RS12715 PF06250 YhcG PDDEXK nuclease domain CJO92_RS12715 PF17761 DUF1016 N-terminal domain CJO92_RS12730 PF02272 DHHA1 domain CJO92_RS12730 PF01411 tRNA synthetases class II (A) CJO92_RS12730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO92_RS12745 PF07331 Tripartite tricarboxylate transporter TctB family CJO92_RS12750 PF01970 Tripartite tricarboxylate transporter TctA family CJO92_RS12755 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CJO92_RS12755 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO92_RS12760 PF04264 YceI-like domain CJO92_RS12785 PF07152 YaeQ protein CJO92_RS12790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO92_RS12800 PF04752 ChaC-like protein CJO92_RS12810 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS12810 PF00501 AMP-binding enzyme CJO92_RS12815 PF00085 Thioredoxin CJO92_RS12825 PF01814 Hemerythrin HHE cation binding domain CJO92_RS12830 PF00141 Peroxidase CJO92_RS12835 PF00899 ThiF family CJO92_RS12840 PF05170 AsmA family CJO92_RS12845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO92_RS12845 PF00034 Cytochrome c CJO92_RS12850 PF00732 GMC oxidoreductase CJO92_RS12850 PF05199 GMC oxidoreductase CJO92_RS12860 PF00933 Glycosyl hydrolase family 3 N terminal domain CJO92_RS12865 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJO92_RS12865 PF01243 Pyridoxamine 5'-phosphate oxidase CJO92_RS12880 PF01625 Peptide methionine sulfoxide reductase CJO92_RS12885 PF01613 Flavin reductase like domain CJO92_RS12895 PF01037 Lrp/AsnC ligand binding domain CJO92_RS12900 PF04199 Putative cyclase CJO92_RS12905 PF00266 Aminotransferase class-V CJO92_RS12910 PF03301 Tryptophan 2,3-dioxygenase CJO92_RS12920 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS12920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS12920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS12925 PF00860 Permease family CJO92_RS12930 PF00578 AhpC/TSA family CJO92_RS12930 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJO92_RS12935 PF05957 Bacterial protein of unknown function (DUF883) CJO92_RS12955 PF00005 ABC transporter CJO92_RS12960 PF03649 Uncharacterised protein family (UPF0014) CJO92_RS12965 PF00293 NUDIX domain CJO92_RS12970 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJO92_RS12975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS12975 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS12990 PF00793 DAHP synthetase I family CJO92_RS13000 PF04143 Sulphur transport CJO92_RS13005 PF06508 Queuosine biosynthesis protein QueC CJO92_RS13015 PF00691 OmpA family CJO92_RS13020 PF07676 WD40-like Beta Propeller Repeat CJO92_RS13020 PF04052 TolB amino-terminal domain CJO92_RS13030 PF02472 Biopolymer transport protein ExbD/TolR CJO92_RS13035 PF01618 MotA/TolQ/ExbB proton channel family CJO92_RS13040 PF03061 Thioesterase superfamily CJO92_RS13045 PF00106 short chain dehydrogenase CJO92_RS13050 PF00464 Serine hydroxymethyltransferase CJO92_RS13055 PF03477 ATP cone domain CJO92_RS13075 PF05567 Neisseria PilC beta-propeller domain CJO92_RS13105 PF05567 Neisseria PilC beta-propeller domain CJO92_RS13110 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CJO92_RS13110 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS13120 PF01872 RibD C-terminal domain CJO92_RS13120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJO92_RS13125 PF00677 Lumazine binding domain CJO92_RS13130 PF00925 GTP cyclohydrolase II CJO92_RS13130 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJO92_RS13135 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJO92_RS13140 PF01029 NusB family CJO92_RS13145 PF00155 Aminotransferase class I and II CJO92_RS13150 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJO92_RS13150 PF01464 Transglycosylase SLT domain CJO92_RS13155 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJO92_RS13160 PF00171 Aldehyde dehydrogenase family CJO92_RS13165 PF00501 AMP-binding enzyme CJO92_RS13165 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS13195 PF06463 Molybdenum Cofactor Synthesis C CJO92_RS13195 PF04055 Radical SAM superfamily CJO92_RS13200 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS13200 PF00037 4Fe-4S binding domain CJO92_RS13205 PF11953 Domain of unknown function (DUF3470) CJO92_RS13205 PF00037 4Fe-4S binding domain CJO92_RS13210 PF01568 Molydopterin dinucleotide binding domain CJO92_RS13210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO92_RS13210 PF00384 Molybdopterin oxidoreductase CJO92_RS13230 PF02390 Putative methyltransferase CJO92_RS13235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO92_RS13240 PF02673 Bacitracin resistance protein BacA CJO92_RS13250 PF03692 Putative zinc- or iron-chelating domain CJO92_RS13260 PF08361 MAATS-type transcriptional repressor, C-terminal region CJO92_RS13260 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS13270 PF01206 Sulfurtransferase TusA CJO92_RS13270 PF00581 Rhodanese-like domain CJO92_RS13285 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJO92_RS13285 PF00534 Glycosyl transferases group 1 CJO92_RS13290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJO92_RS13295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJO92_RS13295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJO92_RS13295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJO92_RS13295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJO92_RS13305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJO92_RS13305 PF00953 Glycosyl transferase family 4 CJO92_RS13330 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJO92_RS13335 PF00483 Nucleotidyl transferase CJO92_RS13340 PF04321 RmlD substrate binding domain CJO92_RS13345 PF16363 GDP-mannose 4,6 dehydratase CJO92_RS13350 PF00149 Calcineurin-like phosphoesterase CJO92_RS13355 PF01553 Acyltransferase CJO92_RS13360 PF01979 Amidohydrolase family CJO92_RS13365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJO92_RS13365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJO92_RS13370 PF00156 Phosphoribosyl transferase domain CJO92_RS13375 PF03652 Holliday junction resolvase CJO92_RS13380 PF02622 Uncharacterized ACR, COG1678 CJO92_RS13385 PF00849 RNA pseudouridylate synthase CJO92_RS13385 PF01479 S4 domain CJO92_RS13390 PF01627 Hpt domain CJO92_RS13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS13390 PF02895 Signal transducing histidine kinase, homodimeric domain CJO92_RS13390 PF01584 CheW-like domain CJO92_RS13390 PF00072 Response regulator receiver domain CJO92_RS13390 PF01627 Hpt domain CJO92_RS13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS13390 PF02895 Signal transducing histidine kinase, homodimeric domain CJO92_RS13390 PF01584 CheW-like domain CJO92_RS13390 PF00072 Response regulator receiver domain CJO92_RS13395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS13395 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJO92_RS13405 PF00072 Response regulator receiver domain CJO92_RS13410 PF00072 Response regulator receiver domain CJO92_RS13415 PF00301 Rubredoxin CJO92_RS13420 PF00202 Aminotransferase class-III CJO92_RS13425 PF00701 Dihydrodipicolinate synthetase family CJO92_RS13435 PF04011 LemA family CJO92_RS13470 PF04972 BON domain CJO92_RS13470 PF00263 Bacterial type II and III secretion system protein CJO92_RS13470 PF13629 Pilus formation protein N terminal region CJO92_RS13485 PF00437 Type II/IV secretion system protein CJO92_RS13515 PF00535 Glycosyl transferase family 2 CJO92_RS13525 PF02543 Carbamoyltransferase N-terminus CJO92_RS13525 PF16861 Carbamoyltransferase C-terminus CJO92_RS13545 PF05987 Bacterial protein of unknown function (DUF898) CJO92_RS13550 PF00118 TCP-1/cpn60 chaperonin family CJO92_RS13555 PF00166 Chaperonin 10 Kd subunit CJO92_RS13575 PF02211 Nitrile hydratase beta subunit CJO92_RS13580 PF02979 Nitrile hydratase, alpha chain CJO92_RS13585 PF00012 Hsp70 protein CJO92_RS13600 PF00270 DEAD/DEAH box helicase CJO92_RS13600 PF03880 DbpA RNA binding domain CJO92_RS13600 PF00271 Helicase conserved C-terminal domain CJO92_RS13605 PF04381 Putative exonuclease, RdgC CJO92_RS13645 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS13650 PF13417 Glutathione S-transferase, N-terminal domain CJO92_RS13655 PF00672 HAMP domain CJO92_RS13655 PF02203 Tar ligand binding domain homologue CJO92_RS13655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS13660 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS13660 PF00107 Zinc-binding dehydrogenase CJO92_RS13665 PF00756 Putative esterase CJO92_RS13680 PF04403 Paraquat-inducible protein A CJO92_RS13685 PF02470 MlaD protein CJO92_RS13695 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS13695 PF00155 Aminotransferase class I and II CJO92_RS13730 PF11871 Domain of unknown function (DUF3391) CJO92_RS13730 PF01966 HD domain CJO92_RS13750 PF01494 FAD binding domain CJO92_RS13755 PF01425 Amidase CJO92_RS13760 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS13760 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS13760 PF00563 EAL domain CJO92_RS13765 PF01979 Amidohydrolase family CJO92_RS13770 PF06299 Protein of unknown function (DUF1045) CJO92_RS13785 PF07690 Major Facilitator Superfamily CJO92_RS13790 PF02735 Ku70/Ku80 beta-barrel domain CJO92_RS13795 PF01068 ATP dependent DNA ligase domain CJO92_RS13795 PF04679 ATP dependent DNA ligase C terminal region CJO92_RS13795 PF13298 DNA polymerase Ligase (LigD) CJO92_RS13800 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CJO92_RS13805 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJO92_RS13815 PF01300 Telomere recombination CJO92_RS13815 PF03481 Putative GTP-binding controlling metal-binding CJO92_RS13820 PF02222 ATP-grasp domain CJO92_RS13820 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJO92_RS13825 PF00731 AIR carboxylase CJO92_RS13830 PF01259 SAICAR synthetase CJO92_RS13835 PF01116 Fructose-bisphosphate aldolase class-II CJO92_RS13840 PF02887 Pyruvate kinase, alpha/beta domain CJO92_RS13840 PF00224 Pyruvate kinase, barrel domain CJO92_RS13845 PF00162 Phosphoglycerate kinase CJO92_RS13850 PF00892 EamA-like transporter family CJO92_RS13865 PF01063 Amino-transferase class IV CJO92_RS13875 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJO92_RS13885 PF00561 alpha/beta hydrolase fold CJO92_RS13895 PF01435 Peptidase family M48 CJO92_RS13900 PF01967 MoaC family CJO92_RS13910 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS13910 PF00114 Pilin (bacterial filament) CJO92_RS13915 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS13915 PF00114 Pilin (bacterial filament) CJO92_RS13920 PF03741 Integral membrane protein TerC family CJO92_RS13925 PF02629 CoA binding domain CJO92_RS13925 PF00549 CoA-ligase CJO92_RS13930 PF08442 ATP-grasp domain CJO92_RS13930 PF00549 CoA-ligase CJO92_RS13940 PF02631 RecX family CJO92_RS13945 PF00154 recA bacterial DNA recombination protein CJO92_RS13950 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS13950 PF00072 Response regulator receiver domain CJO92_RS13955 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS13965 PF08946 Osmosensory transporter coiled coil CJO92_RS13965 PF00083 Sugar (and other) transporter CJO92_RS13980 PF01494 FAD binding domain CJO92_RS13990 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS13990 PF00072 Response regulator receiver domain CJO92_RS13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS13995 PF03466 LysR substrate binding domain CJO92_RS14000 PF05726 Pirin C-terminal cupin domain CJO92_RS14000 PF02678 Pirin CJO92_RS14005 PF01636 Phosphotransferase enzyme family CJO92_RS14010 PF00270 DEAD/DEAH box helicase CJO92_RS14010 PF00271 Helicase conserved C-terminal domain CJO92_RS14015 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS14020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS14020 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS14020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS14020 PF09317 Domain of unknown function (DUF1974) CJO92_RS14030 PF01575 MaoC like domain CJO92_RS14035 PF02803 Thiolase, C-terminal domain CJO92_RS14035 PF00108 Thiolase, N-terminal domain CJO92_RS14040 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS14040 PF00501 AMP-binding enzyme CJO92_RS14055 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS14055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO92_RS14055 PF13247 4Fe-4S dicluster domain CJO92_RS14065 PF04055 Radical SAM superfamily CJO92_RS14065 PF01938 TRAM domain CJO92_RS14065 PF00919 Uncharacterized protein family UPF0004 CJO92_RS14070 PF02562 PhoH-like protein CJO92_RS14075 PF02130 Uncharacterized protein family UPF0054 CJO92_RS14090 PF00571 CBS domain CJO92_RS14090 PF03471 Transporter associated domain CJO92_RS14095 PF00795 Carbon-nitrogen hydrolase CJO92_RS14100 PF02091 Glycyl-tRNA synthetase alpha subunit CJO92_RS14110 PF02092 Glycyl-tRNA synthetase beta subunit CJO92_RS14110 PF05746 DALR anticodon binding domain CJO92_RS14120 PF01553 Acyltransferase CJO92_RS14130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS14135 PF00892 EamA-like transporter family CJO92_RS14140 PF00398 Ribosomal RNA adenine dimethylase CJO92_RS14145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJO92_RS14150 PF09312 SurA N-terminal domain CJO92_RS14155 PF04453 LPS transport system D CJO92_RS14160 PF01636 Phosphotransferase enzyme family CJO92_RS14175 PF00483 Nucleotidyl transferase CJO92_RS14180 PF00563 EAL domain CJO92_RS14180 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS14180 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS14185 PF00557 Metallopeptidase family M24 CJO92_RS14185 PF05195 Aminopeptidase P, N-terminal domain CJO92_RS14190 PF01494 FAD binding domain CJO92_RS14195 PF01266 FAD dependent oxidoreductase CJO92_RS14200 PF01207 Dihydrouridine synthase (Dus) CJO92_RS14205 PF02954 Bacterial regulatory protein, Fis family CJO92_RS14210 PF01808 AICARFT/IMPCHase bienzyme CJO92_RS14210 PF02142 MGS-like domain CJO92_RS14215 PF02075 Crossover junction endodeoxyribonuclease RuvC CJO92_RS14230 PF07499 RuvA, C-terminal domain CJO92_RS14230 PF01330 RuvA N terminal domain CJO92_RS14235 PF17864 RuvB AAA lid domain CJO92_RS14235 PF05491 RuvB C-terminal winged helix domain CJO92_RS14235 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJO92_RS14245 PF00300 Histidine phosphatase superfamily (branch 1) CJO92_RS14250 PF01161 Phosphatidylethanolamine-binding protein CJO92_RS14255 PF02580 D-Tyr-tRNA(Tyr) deacylase CJO92_RS14260 PF00579 tRNA synthetases class I (W and Y) CJO92_RS14260 PF01479 S4 domain CJO92_RS14265 PF03702 Anhydro-N-acetylmuramic acid kinase CJO92_RS14270 PF01521 Iron-sulphur cluster biosynthesis CJO92_RS14285 PF00380 Ribosomal protein S9/S16 CJO92_RS14290 PF00572 Ribosomal protein L13 CJO92_RS14310 PF01979 Amidohydrolase family CJO92_RS14315 PF05161 MOFRL family CJO92_RS14315 PF13660 Domain of unknown function (DUF4147) CJO92_RS14320 PF13230 Glutamine amidotransferases class-II CJO92_RS14325 PF00005 ABC transporter CJO92_RS14330 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS14335 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS14340 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS14345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJO92_RS14345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJO92_RS14355 PF00005 ABC transporter CJO92_RS14355 PF00664 ABC transporter transmembrane region CJO92_RS14360 PF03061 Thioesterase superfamily CJO92_RS14365 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS14370 PF02803 Thiolase, C-terminal domain CJO92_RS14370 PF00108 Thiolase, N-terminal domain CJO92_RS14375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO92_RS14375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO92_RS14375 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS14380 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO92_RS14380 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS14380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS14380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS14390 PF01144 Coenzyme A transferase CJO92_RS14395 PF13091 PLD-like domain CJO92_RS14400 PF03372 Endonuclease/Exonuclease/phosphatase family CJO92_RS14405 PF00293 NUDIX domain CJO92_RS14415 PF00152 tRNA synthetases class II (D, K and N) CJO92_RS14415 PF01336 OB-fold nucleic acid binding domain CJO92_RS14415 PF02938 GAD domain CJO92_RS14435 PF05724 Thiopurine S-methyltransferase (TPMT) CJO92_RS14440 PF03109 ABC1 family CJO92_RS14455 PF01209 ubiE/COQ5 methyltransferase family CJO92_RS14465 PF06472 ABC transporter transmembrane region 2 CJO92_RS14465 PF00005 ABC transporter CJO92_RS14480 PF09335 SNARE associated Golgi protein CJO92_RS14485 PF07670 Nucleoside recognition CJO92_RS14490 PF17655 Inward rectifier potassium channel C-terminal domain CJO92_RS14490 PF07885 Ion channel CJO92_RS14495 PF00585 C-terminal regulatory domain of Threonine dehydratase CJO92_RS14495 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS14500 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CJO92_RS14500 PF14489 QueF-like protein CJO92_RS14530 PF00501 AMP-binding enzyme CJO92_RS14530 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS14535 PF01202 Shikimate kinase CJO92_RS14545 PF07859 alpha/beta hydrolase fold CJO92_RS14550 PF04143 Sulphur transport CJO92_RS14560 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO92_RS14585 PF07977 FabA-like domain CJO92_RS14595 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJO92_RS14595 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJO92_RS14600 PF03176 MMPL family CJO92_RS14605 PF01522 Polysaccharide deacetylase CJO92_RS14610 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO92_RS14610 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO92_RS14630 PF00436 Single-strand binding protein family CJO92_RS14635 PF07690 Major Facilitator Superfamily CJO92_RS14640 PF17760 UvrA interaction domain CJO92_RS14640 PF17755 UvrA DNA-binding domain CJO92_RS14650 PF02690 Na+/Pi-cotransporter CJO92_RS14655 PF01810 LysE type translocator CJO92_RS14660 PF00156 Phosphoribosyl transferase domain CJO92_RS14665 PF01965 DJ-1/PfpI family CJO92_RS14675 PF02254 TrkA-N domain CJO92_RS14675 PF00999 Sodium/hydrogen exchanger family CJO92_RS14675 PF02080 TrkA-C domain CJO92_RS14685 PF00571 CBS domain CJO92_RS14685 PF01380 SIS domain CJO92_RS14705 PF00005 ABC transporter CJO92_RS14705 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS14710 PF04552 Sigma-54, DNA binding domain CJO92_RS14710 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJO92_RS14710 PF04963 Sigma-54 factor, core binding domain CJO92_RS14715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJO92_RS14720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJO92_RS14725 PF02603 HPr Serine kinase N terminus CJO92_RS14725 PF07475 HPr Serine kinase C-terminal domain CJO92_RS14745 PF00633 Helix-hairpin-helix motif CJO92_RS14745 PF10576 Iron-sulfur binding domain of endonuclease III CJO92_RS14745 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO92_RS14745 PF14815 NUDIX domain CJO92_RS14755 PF06827 Zinc finger found in FPG and IleRS CJO92_RS14755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJO92_RS14755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJO92_RS14765 PF03550 Outer membrane lipoprotein LolB CJO92_RS14770 PF00288 GHMP kinases N terminal domain CJO92_RS14770 PF08544 GHMP kinases C terminal CJO92_RS14780 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJO92_RS14780 PF14572 Phosphoribosyl synthetase-associated domain CJO92_RS14785 PF14693 Ribosomal protein TL5, C-terminal domain CJO92_RS14785 PF01386 Ribosomal L25p family CJO92_RS14790 PF01195 Peptidyl-tRNA hydrolase CJO92_RS14800 PF00037 4Fe-4S binding domain CJO92_RS14805 PF01467 Cytidylyltransferase-like CJO92_RS14815 PF05193 Peptidase M16 inactive domain CJO92_RS14820 PF00675 Insulinase (Peptidase family M16) CJO92_RS14820 PF05193 Peptidase M16 inactive domain CJO92_RS14825 PF00448 SRP54-type protein, GTPase domain CJO92_RS14825 PF02881 SRP54-type protein, helical bundle domain CJO92_RS14830 PF01810 LysE type translocator CJO92_RS14835 PF14497 Glutathione S-transferase, C-terminal domain CJO92_RS14835 PF02798 Glutathione S-transferase, N-terminal domain CJO92_RS14840 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO92_RS14845 PF08376 Nitrate and nitrite sensing CJO92_RS14845 PF03861 ANTAR domain CJO92_RS14860 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS14865 PF00005 ABC transporter CJO92_RS14870 PF02885 Glycosyl transferase family, helical bundle domain CJO92_RS14875 PF05726 Pirin C-terminal cupin domain CJO92_RS14875 PF02678 Pirin CJO92_RS14885 PF13188 PAS domain CJO92_RS14885 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS14885 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS14885 PF00563 EAL domain CJO92_RS14890 PF00140 Sigma-70 factor, region 1.2 CJO92_RS14890 PF04542 Sigma-70 region 2 CJO92_RS14890 PF04545 Sigma-70, region 4 CJO92_RS14895 PF02630 SCO1/SenC CJO92_RS14900 PF01040 UbiA prenyltransferase family CJO92_RS14905 PF02628 Cytochrome oxidase assembly protein CJO92_RS14925 PF00510 Cytochrome c oxidase subunit III CJO92_RS14935 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CJO92_RS14945 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO92_RS14950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CJO92_RS14950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO92_RS14960 PF08241 Methyltransferase domain CJO92_RS14965 PF00156 Phosphoribosyl transferase domain CJO92_RS14970 PF00588 SpoU rRNA Methylase family CJO92_RS14975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJO92_RS14975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJO92_RS14980 PF02556 Preprotein translocase subunit SecB CJO92_RS14985 PF00462 Glutaredoxin CJO92_RS14990 PF00581 Rhodanese-like domain CJO92_RS14995 PF00300 Histidine phosphatase superfamily (branch 1) CJO92_RS15000 PF13180 PDZ domain CJO92_RS15000 PF03572 Peptidase family S41 CJO92_RS15005 PF00899 ThiF family CJO92_RS15010 PF00210 Ferritin-like domain CJO92_RS15020 PF00391 PEP-utilising enzyme, mobile domain CJO92_RS15020 PF05524 PEP-utilising enzyme, N-terminal CJO92_RS15020 PF02896 PEP-utilising enzyme, TIM barrel domain CJO92_RS15025 PF00381 PTS HPr component phosphorylation site CJO92_RS15035 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJO92_RS15035 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJO92_RS15045 PF00909 Ammonium Transporter Family CJO92_RS15050 PF00543 Nitrogen regulatory protein P-II CJO92_RS15060 PF04380 Membrane fusogenic activity CJO92_RS15070 PF01078 Magnesium chelatase, subunit ChlI CJO92_RS15070 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJO92_RS15075 PF00264 Common central domain of tyrosinase CJO92_RS15085 PF01810 LysE type translocator CJO92_RS15095 PF01661 Macro domain CJO92_RS15100 PF00578 AhpC/TSA family CJO92_RS15105 PF02954 Bacterial regulatory protein, Fis family CJO92_RS15105 PF00072 Response regulator receiver domain CJO92_RS15105 PF00158 Sigma-54 interaction domain CJO92_RS15110 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS15110 PF02743 Cache domain CJO92_RS15115 PF00375 Sodium:dicarboxylate symporter family CJO92_RS15125 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJO92_RS15130 PF07943 Penicillin-binding protein 5, C-terminal domain CJO92_RS15130 PF00768 D-alanyl-D-alanine carboxypeptidase CJO92_RS15135 PF04359 Protein of unknown function (DUF493) CJO92_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS15140 PF03466 LysR substrate binding domain CJO92_RS15150 PF03099 Biotin/lipoate A/B protein ligase family CJO92_RS15155 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJO92_RS15155 PF04055 Radical SAM superfamily CJO92_RS15170 PF04185 Phosphoesterase family CJO92_RS15170 PF05506 Domain of unknown function (DUF756) CJO92_RS15195 PF00005 ABC transporter CJO92_RS15195 PF09383 NIL domain CJO92_RS15200 PF02405 Permease MlaE CJO92_RS15205 PF03099 Biotin/lipoate A/B protein ligase family CJO92_RS15205 PF08279 HTH domain CJO92_RS15205 PF02237 Biotin protein ligase C terminal domain CJO92_RS15210 PF03309 Type III pantothenate kinase CJO92_RS15220 PF01467 Cytidylyltransferase-like CJO92_RS15230 PF00255 Glutathione peroxidase CJO92_RS15245 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS15285 PF00561 alpha/beta hydrolase fold CJO92_RS15290 PF12091 Protein of unknown function (DUF3567) CJO92_RS15300 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJO92_RS15300 PF00809 Pterin binding enzyme CJO92_RS15300 PF02574 Homocysteine S-methyltransferase CJO92_RS15300 PF02310 B12 binding domain CJO92_RS15300 PF02607 B12 binding domain CJO92_RS15305 PF02607 B12 binding domain CJO92_RS15305 PF02310 B12 binding domain CJO92_RS15305 PF02574 Homocysteine S-methyltransferase CJO92_RS15305 PF00809 Pterin binding enzyme CJO92_RS15305 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJO92_RS15315 PF00072 Response regulator receiver domain CJO92_RS15315 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS15320 PF00072 Response regulator receiver domain CJO92_RS15320 PF04397 LytTr DNA-binding domain CJO92_RS15330 PF07730 Histidine kinase CJO92_RS15330 PF17200 Single Cache domain 2 CJO92_RS15340 PF03485 Arginyl tRNA synthetase N terminal domain CJO92_RS15340 PF05746 DALR anticodon binding domain CJO92_RS15340 PF00750 tRNA synthetases class I (R) CJO92_RS15350 PF13462 Thioredoxin CJO92_RS15355 PF00106 short chain dehydrogenase CJO92_RS15365 PF03992 Antibiotic biosynthesis monooxygenase CJO92_RS15375 PF13411 MerR HTH family regulatory protein CJO92_RS15380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS15380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS15380 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS15385 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CJO92_RS15390 PF00484 Carbonic anhydrase CJO92_RS15405 PF02803 Thiolase, C-terminal domain CJO92_RS15405 PF00108 Thiolase, N-terminal domain CJO92_RS15415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS15415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS15415 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS15430 PF13419 Haloacid dehalogenase-like hydrolase CJO92_RS15440 PF01039 Carboxyl transferase domain CJO92_RS15450 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS15455 PF06968 Biotin and Thiamin Synthesis associated domain CJO92_RS15455 PF04055 Radical SAM superfamily CJO92_RS15470 PF02785 Biotin carboxylase C-terminal domain CJO92_RS15470 PF00289 Biotin carboxylase, N-terminal domain CJO92_RS15470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO92_RS15470 PF18140 Propionyl-coenzyme A carboxylase BT domain CJO92_RS15470 PF00364 Biotin-requiring enzyme CJO92_RS15485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS15490 PF00682 HMGL-like CJO92_RS15505 PF00753 Metallo-beta-lactamase superfamily CJO92_RS15505 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJO92_RS15515 PF00561 alpha/beta hydrolase fold CJO92_RS15540 PF02567 Phenazine biosynthesis-like protein CJO92_RS15550 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CJO92_RS15550 PF06594 Haemolysin-type calcium binding protein related domain CJO92_RS15560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO92_RS15560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO92_RS15565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS15565 PF03466 LysR substrate binding domain CJO92_RS15585 PF07969 Amidohydrolase family CJO92_RS15595 PF01642 Methylmalonyl-CoA mutase CJO92_RS15595 PF02310 B12 binding domain CJO92_RS15625 PF06772 Bacterial low temperature requirement A protein (LtrA) CJO92_RS15635 PF00155 Aminotransferase class I and II CJO92_RS15640 PF01137 RNA 3'-terminal phosphate cyclase CJO92_RS15640 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CJO92_RS15645 PF10127 RNA repair pathway DNA polymerase beta family CJO92_RS15650 PF01139 tRNA-splicing ligase RtcB CJO92_RS15660 PF06956 Regulator of RNA terminal phosphate cyclase CJO92_RS15660 PF00158 Sigma-54 interaction domain CJO92_RS15675 PF00708 Acylphosphatase CJO92_RS15690 PF01883 Iron-sulfur cluster assembly protein CJO92_RS15695 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO92_RS15705 PF07732 Multicopper oxidase CJO92_RS15750 PF01380 SIS domain CJO92_RS15755 PF12804 MobA-like NTP transferase domain CJO92_RS15755 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS15755 PF14602 Hexapeptide repeat of succinyl-transferase CJO92_RS15765 PF01171 PP-loop family CJO92_RS15770 PF02558 Ketopantoate reductase PanE/ApbA CJO92_RS15770 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJO92_RS15780 PF01040 UbiA prenyltransferase family CJO92_RS15785 PF01565 FAD binding domain CJO92_RS15785 PF04030 D-arabinono-1,4-lactone oxidase CJO92_RS15790 PF00106 short chain dehydrogenase CJO92_RS15800 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CJO92_RS15805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO92_RS15805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS15815 PF02321 Outer membrane efflux protein CJO92_RS15825 PF00005 ABC transporter CJO92_RS15830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS15840 PF00171 Aldehyde dehydrogenase family CJO92_RS15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS15845 PF03466 LysR substrate binding domain CJO92_RS15850 PF00202 Aminotransferase class-III CJO92_RS15855 PF00491 Arginase family CJO92_RS15875 PF07690 Major Facilitator Superfamily CJO92_RS15880 PF01435 Peptidase family M48 CJO92_RS15890 PF05593 RHS Repeat CJO92_RS15890 PF03527 RHS protein CJO92_RS15925 PF00892 EamA-like transporter family CJO92_RS15930 PF00881 Nitroreductase family CJO92_RS15950 PF02698 DUF218 domain CJO92_RS15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS15960 PF03466 LysR substrate binding domain CJO92_RS15970 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO92_RS15975 PF05360 yiaA/B two helix domain CJO92_RS15980 PF03372 Endonuclease/Exonuclease/phosphatase family CJO92_RS15985 PF00156 Phosphoribosyl transferase domain CJO92_RS15990 PF03976 Polyphosphate kinase 2 (PPK2) CJO92_RS15995 PF01678 Diaminopimelate epimerase CJO92_RS16000 PF03279 Bacterial lipid A biosynthesis acyltransferase CJO92_RS16010 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJO92_RS16010 PF02772 S-adenosylmethionine synthetase, central domain CJO92_RS16010 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJO92_RS16020 PF12833 Helix-turn-helix domain CJO92_RS16030 PF01743 Poly A polymerase head domain CJO92_RS16030 PF00571 CBS domain CJO92_RS16040 PF01037 Lrp/AsnC ligand binding domain CJO92_RS16045 PF04542 Sigma-70 region 2 CJO92_RS16045 PF08281 Sigma-70, region 4 CJO92_RS16045 PF12680 SnoaL-like domain CJO92_RS16050 PF02627 Carboxymuconolactone decarboxylase family CJO92_RS16075 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS16080 PF18158 Adaptive response protein AidB N-terminal domain CJO92_RS16080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS16080 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS16115 PF03060 Nitronate monooxygenase CJO92_RS16120 PF13667 ThiC-associated domain CJO92_RS16120 PF01964 Radical SAM ThiC family CJO92_RS16125 PF01266 FAD dependent oxidoreductase CJO92_RS16135 PF05690 Thiazole biosynthesis protein ThiG CJO92_RS16140 PF02581 Thiamine monophosphate synthase CJO92_RS16145 PF06983 3-demethylubiquinone-9 3-methyltransferase CJO92_RS16155 PF08543 Phosphomethylpyrimidine kinase CJO92_RS16165 PF00245 Alkaline phosphatase CJO92_RS16170 PF00245 Alkaline phosphatase CJO92_RS16185 PF05221 S-adenosyl-L-homocysteine hydrolase CJO92_RS16185 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJO92_RS16190 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CJO92_RS16195 PF02219 Methylenetetrahydrofolate reductase CJO92_RS16205 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJO92_RS16210 PF01464 Transglycosylase SLT domain CJO92_RS16210 PF14718 Soluble lytic murein transglycosylase L domain CJO92_RS16220 PF02798 Glutathione S-transferase, N-terminal domain CJO92_RS16220 PF14497 Glutathione S-transferase, C-terminal domain CJO92_RS16225 PF12627 Probable RNA and SrmB- binding site of polymerase A CJO92_RS16225 PF01743 Poly A polymerase head domain CJO92_RS16225 PF01966 HD domain CJO92_RS16230 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS16235 PF05853 beta-keto acid cleavage enzyme CJO92_RS16240 PF00202 Aminotransferase class-III CJO92_RS16260 PF00072 Response regulator receiver domain CJO92_RS16260 PF00158 Sigma-54 interaction domain CJO92_RS16260 PF02954 Bacterial regulatory protein, Fis family CJO92_RS16265 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS16265 PF00989 PAS fold CJO92_RS16265 PF00672 HAMP domain CJO92_RS16275 PF01189 16S rRNA methyltransferase RsmB/F CJO92_RS16275 PF01029 NusB family CJO92_RS16280 PF01435 Peptidase family M48 CJO92_RS16285 PF01810 LysE type translocator CJO92_RS16290 PF02911 Formyl transferase, C-terminal domain CJO92_RS16290 PF00551 Formyl transferase CJO92_RS16300 PF01327 Polypeptide deformylase CJO92_RS16305 PF01476 LysM domain CJO92_RS16310 PF17782 DprA winged helix domain CJO92_RS16310 PF02481 DNA recombination-mediator protein A CJO92_RS16320 PF01131 DNA topoisomerase CJO92_RS16320 PF01751 Toprim domain CJO92_RS16325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS16325 PF03466 LysR substrate binding domain CJO92_RS16330 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS16330 PF00501 AMP-binding enzyme CJO92_RS16335 PF01098 Cell cycle protein CJO92_RS16340 PF03717 Penicillin-binding Protein dimerisation domain CJO92_RS16340 PF00905 Penicillin binding protein transpeptidase domain CJO92_RS16350 PF04085 rod shape-determining protein MreC CJO92_RS16360 PF02686 Glu-tRNAGln amidotransferase C subunit CJO92_RS16365 PF01425 Amidase CJO92_RS16380 PF02934 GatB/GatE catalytic domain CJO92_RS16380 PF02637 GatB domain CJO92_RS16390 PF00589 Phage integrase family CJO92_RS16390 PF02899 Phage integrase, N-terminal SAM-like domain CJO92_RS16395 PF17785 PUA-like domain CJO92_RS16395 PF10672 S-adenosylmethionine-dependent methyltransferase CJO92_RS16400 PF08031 Berberine and berberine like CJO92_RS16400 PF01565 FAD binding domain CJO92_RS16415 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJO92_RS16415 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO92_RS16420 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJO92_RS16425 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO92_RS16425 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJO92_RS16430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS16435 PF00227 Proteasome subunit CJO92_RS16440 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS16440 PF10431 C-terminal, D2-small domain, of ClpB protein CJO92_RS16440 PF07724 AAA domain (Cdc48 subfamily) CJO92_RS16450 PF00072 Response regulator receiver domain CJO92_RS16455 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS16480 PF04542 Sigma-70 region 2 CJO92_RS16480 PF08281 Sigma-70, region 4 CJO92_RS16485 PF00696 Amino acid kinase family CJO92_RS16495 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS16500 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS16500 PF00155 Aminotransferase class I and II CJO92_RS16505 PF00202 Aminotransferase class-III CJO92_RS16510 PF00171 Aldehyde dehydrogenase family CJO92_RS16515 PF00561 alpha/beta hydrolase fold CJO92_RS16535 PF04328 Selenoprotein, putative CJO92_RS16540 PF13722 5TM C-terminal transporter carbon starvation CstA CJO92_RS16540 PF02554 Carbon starvation protein CstA CJO92_RS16545 PF07730 Histidine kinase CJO92_RS16545 PF17200 Single Cache domain 2 CJO92_RS16550 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS16550 PF00072 Response regulator receiver domain CJO92_RS16555 PF01261 Xylose isomerase-like TIM barrel CJO92_RS16565 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS16565 PF00072 Response regulator receiver domain CJO92_RS16570 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CJO92_RS16570 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CJO92_RS16580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS16580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO92_RS16585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJO92_RS16590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO92_RS16590 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS16600 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS16600 PF08361 MAATS-type transcriptional repressor, C-terminal region CJO92_RS16605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS16605 PF00529 HlyD membrane-fusion protein of T1SS CJO92_RS16610 PF00873 AcrB/AcrD/AcrF family CJO92_RS16615 PF02321 Outer membrane efflux protein CJO92_RS16620 PF01165 Ribosomal protein S21 CJO92_RS16625 PF00149 Calcineurin-like phosphoesterase CJO92_RS16625 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJO92_RS16640 PF01926 50S ribosome-binding GTPase CJO92_RS16640 PF12631 MnmE helical domain CJO92_RS16640 PF10396 GTP-binding protein TrmE N-terminus CJO92_RS16645 PF14849 YidC periplasmic domain CJO92_RS16645 PF02096 60Kd inner membrane protein CJO92_RS16650 PF01809 Putative membrane protein insertion efficiency factor CJO92_RS16655 PF00825 Ribonuclease P CJO92_RS16660 PF00468 Ribosomal protein L34 CJO92_RS16675 PF00313 'Cold-shock' DNA-binding domain CJO92_RS16680 PF13614 AAA domain CJO92_RS16685 PF02195 ParB-like nuclease domain CJO92_RS16685 PF17762 HTH domain found in ParB protein CJO92_RS16700 PF00483 Nucleotidyl transferase CJO92_RS16705 PF00083 Sugar (and other) transporter CJO92_RS16710 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS16710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS16710 PF02743 Cache domain CJO92_RS16715 PF00158 Sigma-54 interaction domain CJO92_RS16715 PF02954 Bacterial regulatory protein, Fis family CJO92_RS16715 PF00072 Response regulator receiver domain CJO92_RS16720 PF10086 YhfC intramembrane metalloprotease CJO92_RS16730 PF08447 PAS fold CJO92_RS16730 PF08448 PAS fold CJO92_RS16730 PF00563 EAL domain CJO92_RS16730 PF13426 PAS domain CJO92_RS16730 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS16730 PF05231 MASE1 CJO92_RS16735 PF13458 Periplasmic binding protein CJO92_RS16740 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS16745 PF11862 Domain of unknown function (DUF3382) CJO92_RS16745 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS16750 PF00005 ABC transporter CJO92_RS16750 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS16755 PF00005 ABC transporter CJO92_RS16760 PF03466 LysR substrate binding domain CJO92_RS16760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS16775 PF00654 Voltage gated chloride channel CJO92_RS16790 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS16795 PF03466 LysR substrate binding domain CJO92_RS16800 PF01161 Phosphatidylethanolamine-binding protein CJO92_RS16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS16820 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS16820 PF00672 HAMP domain CJO92_RS16820 PF18698 Histidine kinase sensor domain CJO92_RS16825 PF00072 Response regulator receiver domain CJO92_RS16830 PF00873 AcrB/AcrD/AcrF family CJO92_RS16835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS16840 PF02321 Outer membrane efflux protein CJO92_RS16855 PF04344 Chemotaxis phosphatase, CheZ CJO92_RS16860 PF00072 Response regulator receiver domain CJO92_RS16875 PF00816 H-NS histone family CJO92_RS16890 PF00905 Penicillin binding protein transpeptidase domain CJO92_RS16900 PF01494 FAD binding domain CJO92_RS16905 PF00106 short chain dehydrogenase CJO92_RS16915 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS16920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS16920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS16920 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS16925 PF00501 AMP-binding enzyme CJO92_RS16925 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS16960 PF00083 Sugar (and other) transporter CJO92_RS16965 PF01381 Helix-turn-helix CJO92_RS16970 PF05973 Phage derived protein Gp49-like (DUF891) CJO92_RS16975 PF07690 Major Facilitator Superfamily CJO92_RS16985 PF01638 HxlR-like helix-turn-helix CJO92_RS17000 PF03466 LysR substrate binding domain CJO92_RS17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS17015 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS17015 PF00593 TonB dependent receptor CJO92_RS17045 PF07726 ATPase family associated with various cellular activities (AAA) CJO92_RS17045 PF17863 AAA lid domain CJO92_RS17055 PF11992 Domain of unknown function (DUF3488) CJO92_RS17055 PF13559 Domain of unknown function (DUF4129) CJO92_RS17055 PF01841 Transglutaminase-like superfamily CJO92_RS17060 PF00484 Carbonic anhydrase CJO92_RS17065 PF01740 STAS domain CJO92_RS17065 PF00916 Sulfate permease family CJO92_RS17085 PF04303 PrpF protein CJO92_RS17090 PF00330 Aconitase family (aconitate hydratase) CJO92_RS17090 PF00694 Aconitase C-terminal domain CJO92_RS17095 PF00285 Citrate synthase, C-terminal domain CJO92_RS17105 PF00158 Sigma-54 interaction domain CJO92_RS17105 PF02954 Bacterial regulatory protein, Fis family CJO92_RS17105 PF06506 Propionate catabolism activator CJO92_RS17125 PF00580 UvrD/REP helicase N-terminal domain CJO92_RS17125 PF13361 UvrD-like helicase C-terminal domain CJO92_RS17140 PF00360 Phytochrome region CJO92_RS17140 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS17140 PF01590 GAF domain CJO92_RS17140 PF00563 EAL domain CJO92_RS17145 PF00892 EamA-like transporter family CJO92_RS17170 PF01095 Pectinesterase CJO92_RS17195 PF00150 Cellulase (glycosyl hydrolase family 5) CJO92_RS17205 PF01554 MatE CJO92_RS17210 PF03621 MbtH-like protein CJO92_RS17215 PF00668 Condensation domain CJO92_RS17215 PF00975 Thioesterase domain CJO92_RS17215 PF00550 Phosphopantetheine attachment site CJO92_RS17215 PF00501 AMP-binding enzyme CJO92_RS17215 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS17290 PF10282 Lactonase, 7-bladed beta-propeller CJO92_RS17295 PF00694 Aconitase C-terminal domain CJO92_RS17295 PF00330 Aconitase family (aconitate hydratase) CJO92_RS17310 PF07478 D-ala D-ala ligase C-terminus CJO92_RS17310 PF01820 D-ala D-ala ligase N-terminus CJO92_RS17315 PF07690 Major Facilitator Superfamily CJO92_RS17320 PF00248 Aldo/keto reductase family CJO92_RS17325 PF03466 LysR substrate binding domain CJO92_RS17325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS17335 PF01925 Sulfite exporter TauE/SafE CJO92_RS17345 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO92_RS17345 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJO92_RS17355 PF00561 alpha/beta hydrolase fold CJO92_RS17365 PF02600 Disulfide bond formation protein DsbB CJO92_RS17370 PF03061 Thioesterase superfamily CJO92_RS17400 PF01048 Phosphorylase superfamily CJO92_RS17400 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CJO92_RS17460 PF00989 PAS fold CJO92_RS17460 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS17465 PF03466 LysR substrate binding domain CJO92_RS17465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS17470 PF00355 Rieske [2Fe-2S] domain CJO92_RS17475 PF00175 Oxidoreductase NAD-binding domain CJO92_RS17475 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS17480 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS17490 PF01047 MarR family CJO92_RS17495 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS17500 PF00171 Aldehyde dehydrogenase family CJO92_RS17505 PF00550 Phosphopantetheine attachment site CJO92_RS17505 PF07993 Male sterility protein CJO92_RS17505 PF00501 AMP-binding enzyme CJO92_RS17510 PF06505 Activator of aromatic catabolism CJO92_RS17510 PF02954 Bacterial regulatory protein, Fis family CJO92_RS17510 PF00158 Sigma-54 interaction domain CJO92_RS17510 PF02830 V4R domain CJO92_RS17515 PF00171 Aldehyde dehydrogenase family CJO92_RS17530 PF07859 alpha/beta hydrolase fold CJO92_RS17535 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS17535 PF06715 Gp5 C-terminal repeat (3 copies) CJO92_RS17575 PF04909 Amidohydrolase CJO92_RS17580 PF07690 Major Facilitator Superfamily CJO92_RS17585 PF00128 Alpha amylase, catalytic domain CJO92_RS17590 PF02446 4-alpha-glucanotransferase CJO92_RS17595 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJO92_RS17595 PF00128 Alpha amylase, catalytic domain CJO92_RS17595 PF11941 Domain of unknown function (DUF3459) CJO92_RS17600 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJO92_RS17600 PF00128 Alpha amylase, catalytic domain CJO92_RS17605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJO92_RS17605 PF02806 Alpha amylase, C-terminal all-beta domain CJO92_RS17605 PF00128 Alpha amylase, catalytic domain CJO92_RS17610 PF00128 Alpha amylase, catalytic domain CJO92_RS17610 PF16657 Maltogenic Amylase, C-terminal domain CJO92_RS17615 PF00128 Alpha amylase, catalytic domain CJO92_RS17615 PF11896 Domain of unknown function (DUF3416) CJO92_RS17620 PF00534 Glycosyl transferases group 1 CJO92_RS17620 PF08323 Starch synthase catalytic domain CJO92_RS17625 PF00005 ABC transporter CJO92_RS17630 PF01032 FecCD transport family CJO92_RS17635 PF01497 Periplasmic binding protein CJO92_RS17640 PF05171 Haemin-degrading HemS.ChuX domain CJO92_RS17645 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS17645 PF00593 TonB dependent receptor CJO92_RS17650 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJO92_RS17650 PF00578 AhpC/TSA family CJO92_RS17655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS17655 PF13192 Thioredoxin domain CJO92_RS17660 PF01475 Ferric uptake regulator family CJO92_RS17680 PF07664 Ferrous iron transport protein B C terminus CJO92_RS17680 PF02421 Ferrous iron transport protein B CJO92_RS17680 PF04023 FeoA domain CJO92_RS17680 PF17910 FeoB cytosolic helical domain CJO92_RS17680 PF07670 Nucleoside recognition CJO92_RS17690 PF08448 PAS fold CJO92_RS17690 PF00563 EAL domain CJO92_RS17690 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS17690 PF05231 MASE1 CJO92_RS17690 PF08447 PAS fold CJO92_RS17690 PF13426 PAS domain CJO92_RS17695 PF00563 EAL domain CJO92_RS17695 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS17695 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS17700 PF08447 PAS fold CJO92_RS17700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS17720 PF01470 Pyroglutamyl peptidase CJO92_RS17735 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJO92_RS17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS17740 PF03466 LysR substrate binding domain CJO92_RS17745 PF07687 Peptidase dimerisation domain CJO92_RS17745 PF01546 Peptidase family M20/M25/M40 CJO92_RS17750 PF07690 Major Facilitator Superfamily CJO92_RS17770 PF02839 Carbohydrate binding domain CJO92_RS17775 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS17775 PF00571 CBS domain CJO92_RS17780 PF01204 Trehalase CJO92_RS17800 PF13188 PAS domain CJO92_RS17800 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS17800 PF00563 EAL domain CJO92_RS17800 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS17840 PF13520 Amino acid permease CJO92_RS17845 PF01554 MatE CJO92_RS17850 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS17860 PF14883 Hypothetical glycosyl hydrolase family 13 CJO92_RS17860 PF01522 Polysaccharide deacetylase CJO92_RS17865 PF00535 Glycosyl transferase family 2 CJO92_RS17885 PF13533 Biotin-lipoyl like CJO92_RS17890 PF03412 Peptidase C39 family CJO92_RS17890 PF00005 ABC transporter CJO92_RS17890 PF00664 ABC transporter transmembrane region CJO92_RS17905 PF00672 HAMP domain CJO92_RS17905 PF02203 Tar ligand binding domain homologue CJO92_RS17905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS17930 PF03060 Nitronate monooxygenase CJO92_RS17935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS17935 PF03466 LysR substrate binding domain CJO92_RS17940 PF10400 Virulence activator alpha C-term CJO92_RS17940 PF03551 Transcriptional regulator PadR-like family CJO92_RS17945 PF03060 Nitronate monooxygenase CJO92_RS17955 PF00582 Universal stress protein family CJO92_RS17970 PF00403 Heavy-metal-associated domain CJO92_RS17975 PF13411 MerR HTH family regulatory protein CJO92_RS17985 PF00682 HMGL-like CJO92_RS17985 PF08502 LeuA allosteric (dimerisation) domain CJO92_RS17990 PF01799 [2Fe-2S] binding domain CJO92_RS17990 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS17995 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS18000 PF02566 OsmC-like protein CJO92_RS18010 PF05433 Glycine zipper 2TM domain CJO92_RS18015 PF00563 EAL domain CJO92_RS18015 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS18015 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS18020 PF00816 H-NS histone family CJO92_RS18025 PF07702 UTRA domain CJO92_RS18025 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS18030 PF13609 Gram-negative porin CJO92_RS18035 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS18050 PF17656 FlgA N-terminal domain CJO92_RS18050 PF13144 Chaperone for flagella basal body P-ring formation CJO92_RS18055 PF00460 Flagella basal body rod protein CJO92_RS18060 PF00460 Flagella basal body rod protein CJO92_RS18060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO92_RS18065 PF13860 FlgD Ig-like domain CJO92_RS18065 PF13861 FlgD Tudor-like domain CJO92_RS18065 PF03963 Flagellar hook capping protein - N-terminal region CJO92_RS18070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO92_RS18070 PF07559 Flagellar basal body protein FlaE CJO92_RS18070 PF00460 Flagella basal body rod protein CJO92_RS18075 PF00460 Flagella basal body rod protein CJO92_RS18075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO92_RS18080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO92_RS18080 PF00460 Flagella basal body rod protein CJO92_RS18085 PF02107 Flagellar L-ring protein CJO92_RS18090 PF02119 Flagellar P-ring protein CJO92_RS18095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJO92_RS18095 PF10135 Rod binding protein CJO92_RS18100 PF00460 Flagella basal body rod protein CJO92_RS18100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO92_RS18105 PF00669 Bacterial flagellin N-terminal helical region CJO92_RS18115 PF01311 Bacterial export proteins, family 1 CJO92_RS18120 PF01313 Bacterial export proteins, family 3 CJO92_RS18125 PF00813 FliP family CJO92_RS18130 PF04347 Flagellar biosynthesis protein, FliO CJO92_RS18135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJO92_RS18140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJO92_RS18140 PF02154 Flagellar motor switch protein FliM CJO92_RS18150 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS18150 PF00563 EAL domain CJO92_RS18150 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS18160 PF00072 Response regulator receiver domain CJO92_RS18160 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS18165 PF00700 Bacterial flagellin C-terminal helical region CJO92_RS18165 PF00669 Bacterial flagellin N-terminal helical region CJO92_RS18175 PF07196 Flagellin hook IN motif CJO92_RS18175 PF02465 Flagellar hook-associated protein 2 N-terminus CJO92_RS18175 PF07195 Flagellar hook-associated protein 2 C-terminus CJO92_RS18180 PF02561 Flagellar protein FliS CJO92_RS18190 PF01047 MarR family CJO92_RS18195 PF00535 Glycosyl transferase family 2 CJO92_RS18205 PF02049 Flagellar hook-basal body complex protein FliE CJO92_RS18210 PF01514 Secretory protein of YscJ/FliF family CJO92_RS18210 PF08345 Flagellar M-ring protein C-terminal CJO92_RS18215 PF14841 FliG middle domain CJO92_RS18215 PF01706 FliG C-terminal domain CJO92_RS18215 PF14842 FliG N-terminal domain CJO92_RS18220 PF02108 Flagellar assembly protein FliH CJO92_RS18225 PF18269 T3SS EscN ATPase C-terminal domain CJO92_RS18225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO92_RS18265 PF00563 EAL domain CJO92_RS18265 PF00360 Phytochrome region CJO92_RS18265 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS18265 PF01590 GAF domain CJO92_RS18280 PF00360 Phytochrome region CJO92_RS18280 PF00563 EAL domain CJO92_RS18280 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS18280 PF01590 GAF domain CJO92_RS18340 PF07690 Major Facilitator Superfamily CJO92_RS18350 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS18350 PF00593 TonB dependent receptor CJO92_RS18360 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS18360 PF00593 TonB dependent receptor CJO92_RS18365 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS18370 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJO92_RS18375 PF04183 IucA / IucC family CJO92_RS18375 PF06276 Ferric iron reductase FhuF-like transporter CJO92_RS18380 PF07690 Major Facilitator Superfamily CJO92_RS18385 PF04183 IucA / IucC family CJO92_RS18385 PF06276 Ferric iron reductase FhuF-like transporter CJO92_RS18390 PF06276 Ferric iron reductase FhuF-like transporter CJO92_RS18390 PF04183 IucA / IucC family CJO92_RS18395 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO92_RS18400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO92_RS18400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO92_RS18405 PF03466 LysR substrate binding domain CJO92_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS18410 PF00107 Zinc-binding dehydrogenase CJO92_RS18410 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS18420 PF00873 AcrB/AcrD/AcrF family CJO92_RS18425 PF13533 Biotin-lipoyl like CJO92_RS18430 PF02321 Outer membrane efflux protein CJO92_RS18445 PF01738 Dienelactone hydrolase family CJO92_RS18445 PF00156 Phosphoribosyl transferase domain CJO92_RS18455 PF01810 LysE type translocator CJO92_RS18460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS18460 PF03466 LysR substrate binding domain CJO92_RS18480 PF00005 ABC transporter CJO92_RS18485 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS18490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS18495 PF01037 Lrp/AsnC ligand binding domain CJO92_RS18500 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJO92_RS18510 PF13419 Haloacid dehalogenase-like hydrolase CJO92_RS18520 PF01546 Peptidase family M20/M25/M40 CJO92_RS18520 PF07687 Peptidase dimerisation domain CJO92_RS18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS18525 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS18525 PF00672 HAMP domain CJO92_RS18530 PF00072 Response regulator receiver domain CJO92_RS18530 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS18540 PF02321 Outer membrane efflux protein CJO92_RS18545 PF00529 HlyD membrane-fusion protein of T1SS CJO92_RS18545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS18550 PF00873 AcrB/AcrD/AcrF family CJO92_RS18555 PF01230 HIT domain CJO92_RS18570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO92_RS18570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS18580 PF00672 HAMP domain CJO92_RS18580 PF02203 Tar ligand binding domain homologue CJO92_RS18580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS18590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CJO92_RS18590 PF13632 Glycosyl transferase family group 2 CJO92_RS18600 PF02350 UDP-N-acetylglucosamine 2-epimerase CJO92_RS18620 PF00924 Mechanosensitive ion channel CJO92_RS18645 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS18645 PF05230 MASE2 domain CJO92_RS18650 PF01566 Natural resistance-associated macrophage protein CJO92_RS18655 PF00012 Hsp70 protein CJO92_RS18665 PF00072 Response regulator receiver domain CJO92_RS18665 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS18670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS18670 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS18675 PF13460 NAD(P)H-binding CJO92_RS18695 PF13533 Biotin-lipoyl like CJO92_RS18700 PF00873 AcrB/AcrD/AcrF family CJO92_RS18710 PF01433 Peptidase family M1 domain CJO92_RS18710 PF11838 ERAP1-like C-terminal domain CJO92_RS18750 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO92_RS18750 PF17287 POTRA domain CJO92_RS18750 PF08479 POTRA domain, ShlB-type CJO92_RS18755 PF01584 CheW-like domain CJO92_RS18755 PF00072 Response regulator receiver domain CJO92_RS18780 PF13860 FlgD Ig-like domain CJO92_RS18780 PF00082 Subtilase family CJO92_RS18780 PF02225 PA domain CJO92_RS18780 PF05922 Peptidase inhibitor I9 CJO92_RS18790 PF05138 Phenylacetic acid catabolic protein CJO92_RS18795 PF06243 Phenylacetic acid degradation B CJO92_RS18800 PF05138 Phenylacetic acid catabolic protein CJO92_RS18805 PF01883 Iron-sulfur cluster assembly protein CJO92_RS18810 PF00175 Oxidoreductase NAD-binding domain CJO92_RS18810 PF00970 Oxidoreductase FAD-binding domain CJO92_RS18810 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS18840 PF00581 Rhodanese-like domain CJO92_RS18845 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO92_RS18850 PF00881 Nitroreductase family CJO92_RS18855 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJO92_RS18855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO92_RS18860 PF12557 Cob(I)alamin adenosyltransferase N terminal CJO92_RS18860 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CJO92_RS18865 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJO92_RS18865 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO92_RS18870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO92_RS18870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS18875 PF01890 Cobalamin synthesis G C-terminus CJO92_RS18880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS18885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS18890 PF01888 CbiD CJO92_RS18895 PF01903 CbiX CJO92_RS18900 PF14824 Sirohaem biosynthesis protein central CJO92_RS18900 PF10414 Sirohaem synthase dimerisation region CJO92_RS18900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO92_RS18905 PF13519 von Willebrand factor type A domain CJO92_RS18905 PF17863 AAA lid domain CJO92_RS18905 PF07728 AAA domain (dynein-related subfamily) CJO92_RS18910 PF02514 CobN/Magnesium Chelatase CJO92_RS18920 PF03824 High-affinity nickel-transport protein CJO92_RS18925 PF00005 ABC transporter CJO92_RS18930 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS18935 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS18940 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS18945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJO92_RS18950 PF01757 Acyltransferase family CJO92_RS18955 PF03795 YCII-related domain CJO92_RS18965 PF01037 Lrp/AsnC ligand binding domain CJO92_RS18970 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS18975 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS18980 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS18985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJO92_RS18985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJO92_RS18990 PF00171 Aldehyde dehydrogenase family CJO92_RS18995 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS18995 PF00501 AMP-binding enzyme CJO92_RS19000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS19000 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS19000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS19005 PF12833 Helix-turn-helix domain CJO92_RS19005 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CJO92_RS19010 PF00672 HAMP domain CJO92_RS19010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS19010 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS19015 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS19015 PF00072 Response regulator receiver domain CJO92_RS19025 PF07732 Multicopper oxidase CJO92_RS19025 PF00394 Multicopper oxidase CJO92_RS19025 PF07731 Multicopper oxidase CJO92_RS19030 PF05275 Copper resistance protein B precursor (CopB) CJO92_RS19035 PF04234 CopC domain CJO92_RS19040 PF05425 Copper resistance protein D CJO92_RS19050 PF00873 AcrB/AcrD/AcrF family CJO92_RS19060 PF02321 Outer membrane efflux protein CJO92_RS19065 PF00072 Response regulator receiver domain CJO92_RS19065 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS19070 PF16527 Two-component sensor protein CpxA, periplasmic domain CJO92_RS19070 PF00672 HAMP domain CJO92_RS19070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS19070 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19075 PF03466 LysR substrate binding domain CJO92_RS19085 PF00881 Nitroreductase family CJO92_RS19090 PF02525 Flavodoxin-like fold CJO92_RS19120 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS19135 PF00857 Isochorismatase family CJO92_RS19150 PF07690 Major Facilitator Superfamily CJO92_RS19155 PF01047 MarR family CJO92_RS19160 PF01544 CorA-like Mg2+ transporter protein CJO92_RS19165 PF13673 Acetyltransferase (GNAT) domain CJO92_RS19165 PF03352 Methyladenine glycosylase CJO92_RS19165 PF00958 GMP synthase C terminal domain CJO92_RS19165 PF13302 Acetyltransferase (GNAT) domain CJO92_RS19165 PF00117 Glutamine amidotransferase class-I CJO92_RS19170 PF07690 Major Facilitator Superfamily CJO92_RS19185 PF02321 Outer membrane efflux protein CJO92_RS19195 PF00873 AcrB/AcrD/AcrF family CJO92_RS19200 PF00378 Enoyl-CoA hydratase/isomerase CJO92_RS19215 PF03783 Curli production assembly/transport component CsgG CJO92_RS19225 PF05643 Putative bacterial lipoprotein (DUF799) CJO92_RS19230 PF01717 Cobalamin-independent synthase, Catalytic domain CJO92_RS19230 PF08267 Cobalamin-independent synthase, N-terminal domain CJO92_RS19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19235 PF03466 LysR substrate binding domain CJO92_RS19240 PF01243 Pyridoxamine 5'-phosphate oxidase CJO92_RS19240 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJO92_RS19245 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO92_RS19245 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO92_RS19250 PF00218 Indole-3-glycerol phosphate synthase CJO92_RS19255 PF02885 Glycosyl transferase family, helical bundle domain CJO92_RS19255 PF00591 Glycosyl transferase family, a/b domain CJO92_RS19260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS19260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO92_RS19265 PF01168 Alanine racemase, N-terminal domain CJO92_RS19285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO92_RS19285 PF02770 Acyl-CoA dehydrogenase, middle domain CJO92_RS19285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO92_RS19305 PF04209 homogentisate 1,2-dioxygenase CJO92_RS19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19310 PF03466 LysR substrate binding domain CJO92_RS19320 PF01494 FAD binding domain CJO92_RS19340 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS19340 PF00005 ABC transporter CJO92_RS19345 PF00005 ABC transporter CJO92_RS19355 PF00067 Cytochrome P450 CJO92_RS19360 PF00892 EamA-like transporter family CJO92_RS19380 PF01063 Amino-transferase class IV CJO92_RS19395 PF03150 Di-haem cytochrome c peroxidase CJO92_RS19425 PF01958 Domain of unknown function DUF108 CJO92_RS19425 PF03447 Homoserine dehydrogenase, NAD binding domain CJO92_RS19440 PF00982 Glycosyltransferase family 20 CJO92_RS19445 PF13609 Gram-negative porin CJO92_RS19455 PF02233 NAD(P) transhydrogenase beta subunit CJO92_RS19460 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJO92_RS19465 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJO92_RS19465 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJO92_RS19470 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS19470 PF00107 Zinc-binding dehydrogenase CJO92_RS19485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS19485 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO92_RS19490 PF03737 Aldolase/RraA CJO92_RS19495 PF00155 Aminotransferase class I and II CJO92_RS19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19500 PF03466 LysR substrate binding domain CJO92_RS19505 PF00364 Biotin-requiring enzyme CJO92_RS19510 PF00289 Biotin carboxylase, N-terminal domain CJO92_RS19510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO92_RS19510 PF02785 Biotin carboxylase C-terminal domain CJO92_RS19515 PF02682 Carboxyltransferase domain, subdomain C and D CJO92_RS19520 PF02626 Carboxyltransferase domain, subdomain A and B CJO92_RS19530 PF03746 LamB/YcsF family CJO92_RS19535 PF00106 short chain dehydrogenase CJO92_RS19540 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS19545 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS19550 PF00005 ABC transporter CJO92_RS19555 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS19590 PF06715 Gp5 C-terminal repeat (3 copies) CJO92_RS19590 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS19600 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CJO92_RS19615 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CJO92_RS19620 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CJO92_RS19630 PF04965 Gene 25-like lysozyme CJO92_RS19635 PF05947 Type VI secretion system, TssF CJO92_RS19645 PF10431 C-terminal, D2-small domain, of ClpB protein CJO92_RS19645 PF00004 ATPase family associated with various cellular activities (AAA) CJO92_RS19645 PF17871 AAA lid domain CJO92_RS19645 PF07724 AAA domain (Cdc48 subfamily) CJO92_RS19650 PF06715 Gp5 C-terminal repeat (3 copies) CJO92_RS19650 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS19700 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS19710 PF02638 Glycosyl hydrolase-like 10 CJO92_RS19735 PF00144 Beta-lactamase CJO92_RS19745 PF13488 Glycine zipper CJO92_RS19745 PF00691 OmpA family CJO92_RS19755 PF14331 ImcF-related N-terminal domain CJO92_RS19755 PF06744 Type VI secretion protein IcmF C-terminal CJO92_RS19755 PF06761 Intracellular multiplication and human macrophage-killing CJO92_RS19820 PF03466 LysR substrate binding domain CJO92_RS19820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19830 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS19830 PF03472 Autoinducer binding domain CJO92_RS19835 PF00765 Autoinducer synthase CJO92_RS19850 PF10458 Valyl tRNA synthetase tRNA binding arm CJO92_RS19850 PF08264 Anticodon-binding domain of tRNA CJO92_RS19850 PF00133 tRNA synthetases class I (I, L, M and V) CJO92_RS19875 PF00501 AMP-binding enzyme CJO92_RS19880 PF16861 Carbamoyltransferase C-terminus CJO92_RS19880 PF02543 Carbamoyltransferase N-terminus CJO92_RS19910 PF00155 Aminotransferase class I and II CJO92_RS19915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19915 PF03466 LysR substrate binding domain CJO92_RS19920 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO92_RS19925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS19925 PF03466 LysR substrate binding domain CJO92_RS19930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS19935 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS19940 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS19940 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO92_RS19945 PF00005 ABC transporter CJO92_RS19945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS19950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS19950 PF00005 ABC transporter CJO92_RS19965 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS19970 PF07690 Major Facilitator Superfamily CJO92_RS19985 PF14579 Helix-hairpin-helix motif CJO92_RS19985 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJO92_RS19985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJO92_RS19985 PF02811 PHP domain CJO92_RS19990 PF01381 Helix-turn-helix CJO92_RS19995 PF03600 Citrate transporter CJO92_RS20000 PF14492 Elongation Factor G, domain II CJO92_RS20000 PF03764 Elongation factor G, domain IV CJO92_RS20000 PF00009 Elongation factor Tu GTP binding domain CJO92_RS20000 PF03144 Elongation factor Tu domain 2 CJO92_RS20000 PF00679 Elongation factor G C-terminus CJO92_RS20005 PF00027 Cyclic nucleotide-binding domain CJO92_RS20005 PF13545 Crp-like helix-turn-helix domain CJO92_RS20015 PF00037 4Fe-4S binding domain CJO92_RS20015 PF11953 Domain of unknown function (DUF3470) CJO92_RS20030 PF01965 DJ-1/PfpI family CJO92_RS20035 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJO92_RS20035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJO92_RS20040 PF00593 TonB dependent receptor CJO92_RS20040 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS20050 PF00563 EAL domain CJO92_RS20050 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS20050 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS20055 PF06039 Malate:quinone oxidoreductase (Mqo) CJO92_RS20070 PF02321 Outer membrane efflux protein CJO92_RS20075 PF00873 AcrB/AcrD/AcrF family CJO92_RS20080 PF00529 HlyD membrane-fusion protein of T1SS CJO92_RS20080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS20090 PF00892 EamA-like transporter family CJO92_RS20100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20100 PF03466 LysR substrate binding domain CJO92_RS20110 PF07690 Major Facilitator Superfamily CJO92_RS20115 PF02321 Outer membrane efflux protein CJO92_RS20125 PF00857 Isochorismatase family CJO92_RS20135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO92_RS20140 PF01370 NAD dependent epimerase/dehydratase family CJO92_RS20145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20145 PF03466 LysR substrate binding domain CJO92_RS20155 PF00701 Dihydrodipicolinate synthetase family CJO92_RS20160 PF00171 Aldehyde dehydrogenase family CJO92_RS20165 PF07690 Major Facilitator Superfamily CJO92_RS20170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO92_RS20170 PF13378 Enolase C-terminal domain-like CJO92_RS20175 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJO92_RS20175 PF08666 SAF domain CJO92_RS20180 PF01370 NAD dependent epimerase/dehydratase family CJO92_RS20185 PF08450 SMP-30/Gluconolactonase/LRE-like region CJO92_RS20190 PF00295 Glycosyl hydrolases family 28 CJO92_RS20195 PF07690 Major Facilitator Superfamily CJO92_RS20200 PF00293 NUDIX domain CJO92_RS20200 PF01467 Cytidylyltransferase-like CJO92_RS20215 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS20215 PF00563 EAL domain CJO92_RS20215 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS20230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS20230 PF00672 HAMP domain CJO92_RS20230 PF02203 Tar ligand binding domain homologue CJO92_RS20235 PF01464 Transglycosylase SLT domain CJO92_RS20235 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS20275 PF08281 Sigma-70, region 4 CJO92_RS20275 PF04542 Sigma-70 region 2 CJO92_RS20285 PF00072 Response regulator receiver domain CJO92_RS20285 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS20290 PF00072 Response regulator receiver domain CJO92_RS20290 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS20325 PF01313 Bacterial export proteins, family 3 CJO92_RS20330 PF00813 FliP family CJO92_RS20340 PF09483 Type III secretion protein (HpaP) CJO92_RS20345 PF00771 FHIPEP family CJO92_RS20350 PF01312 FlhB HrpN YscU SpaS Family CJO92_RS20365 PF01514 Secretory protein of YscJ/FliF family CJO92_RS20380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO92_RS20380 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO92_RS20380 PF18269 T3SS EscN ATPase C-terminal domain CJO92_RS20395 PF12833 Helix-turn-helix domain CJO92_RS20400 PF03958 Bacterial type II/III secretion system short domain CJO92_RS20400 PF00263 Bacterial type II and III secretion system protein CJO92_RS20405 PF13855 Leucine rich repeat CJO92_RS20430 PF00295 Glycosyl hydrolases family 28 CJO92_RS20435 PF00295 Glycosyl hydrolases family 28 CJO92_RS20455 PF01580 FtsK/SpoIIIE family CJO92_RS20455 PF17854 FtsK alpha domain CJO92_RS20455 PF09397 Ftsk gamma domain CJO92_RS20455 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJO92_RS20470 PF00120 Glutamine synthetase, catalytic domain CJO92_RS20470 PF03951 Glutamine synthetase, beta-Grasp domain CJO92_RS20485 PF00202 Aminotransferase class-III CJO92_RS20495 PF00654 Voltage gated chloride channel CJO92_RS20505 PF08264 Anticodon-binding domain of tRNA CJO92_RS20505 PF13603 Leucyl-tRNA synthetase, Domain 2 CJO92_RS20505 PF00133 tRNA synthetases class I (I, L, M and V) CJO92_RS20525 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJO92_RS20535 PF00266 Aminotransferase class-V CJO92_RS20555 PF00529 HlyD membrane-fusion protein of T1SS CJO92_RS20555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS20560 PF00873 AcrB/AcrD/AcrF family CJO92_RS20575 PF00005 ABC transporter CJO92_RS20580 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS20590 PF03466 LysR substrate binding domain CJO92_RS20590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20595 PF01810 LysE type translocator CJO92_RS20615 PF02543 Carbamoyltransferase N-terminus CJO92_RS20615 PF16861 Carbamoyltransferase C-terminus CJO92_RS20630 PF02543 Carbamoyltransferase N-terminus CJO92_RS20630 PF16861 Carbamoyltransferase C-terminus CJO92_RS20645 PF00561 alpha/beta hydrolase fold CJO92_RS20660 PF07690 Major Facilitator Superfamily CJO92_RS20700 PF03466 LysR substrate binding domain CJO92_RS20700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20710 PF03466 LysR substrate binding domain CJO92_RS20730 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS20730 PF00107 Zinc-binding dehydrogenase CJO92_RS20735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO92_RS20740 PF00106 short chain dehydrogenase CJO92_RS20765 PF00561 alpha/beta hydrolase fold CJO92_RS20800 PF00501 AMP-binding enzyme CJO92_RS20800 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS20805 PF02515 CoA-transferase family III CJO92_RS20810 PF02597 ThiS family CJO92_RS20815 PF14464 Prokaryotic homologs of the JAB domain CJO92_RS20820 PF00581 Rhodanese-like domain CJO92_RS20820 PF00899 ThiF family CJO92_RS20830 PF00578 AhpC/TSA family CJO92_RS20850 PF00355 Rieske [2Fe-2S] domain CJO92_RS20850 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJO92_RS20855 PF18465 Rieske 3Fe-4S CJO92_RS20855 PF00384 Molybdopterin oxidoreductase CJO92_RS20855 PF01568 Molydopterin dinucleotide binding domain CJO92_RS20865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS20875 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJO92_RS20880 PF00230 Major intrinsic protein CJO92_RS20890 PF07690 Major Facilitator Superfamily CJO92_RS20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20910 PF03466 LysR substrate binding domain CJO92_RS20915 PF03466 LysR substrate binding domain CJO92_RS20915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS20920 PF07690 Major Facilitator Superfamily CJO92_RS20925 PF12833 Helix-turn-helix domain CJO92_RS20925 PF06719 AraC-type transcriptional regulator N-terminus CJO92_RS20930 PF00107 Zinc-binding dehydrogenase CJO92_RS20930 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS20935 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS20935 PF01799 [2Fe-2S] binding domain CJO92_RS20940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS20965 PF03358 NADPH-dependent FMN reductase CJO92_RS20970 PF03466 LysR substrate binding domain CJO92_RS20970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS21005 PF00534 Glycosyl transferases group 1 CJO92_RS21035 PF00589 Phage integrase family CJO92_RS21035 PF02899 Phage integrase, N-terminal SAM-like domain CJO92_RS21040 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS21040 PF07702 UTRA domain CJO92_RS21045 PF00206 Lyase CJO92_RS21045 PF10397 Adenylosuccinate lyase C-terminus CJO92_RS21050 PF00375 Sodium:dicarboxylate symporter family CJO92_RS21075 PF02203 Tar ligand binding domain homologue CJO92_RS21075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS21075 PF00672 HAMP domain CJO92_RS21090 PF02581 Thiamine monophosphate synthase CJO92_RS21095 PF00083 Sugar (and other) transporter CJO92_RS21095 PF07690 Major Facilitator Superfamily CJO92_RS21100 PF00465 Iron-containing alcohol dehydrogenase CJO92_RS21105 PF17760 UvrA interaction domain CJO92_RS21105 PF17755 UvrA DNA-binding domain CJO92_RS21105 PF00005 ABC transporter CJO92_RS21130 PF04055 Radical SAM superfamily CJO92_RS21135 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS21135 PF13291 ACT domain CJO92_RS21145 PF00375 Sodium:dicarboxylate symporter family CJO92_RS21150 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO92_RS21155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS21155 PF03466 LysR substrate binding domain CJO92_RS21190 PF02719 Polysaccharide biosynthesis protein CJO92_RS21195 PF01569 PAP2 superfamily CJO92_RS21200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJO92_RS21205 PF00132 Bacterial transferase hexapeptide (six repeats) CJO92_RS21205 PF14602 Hexapeptide repeat of succinyl-transferase CJO92_RS21205 PF17836 PglD N-terminal domain CJO92_RS21210 PF02397 Bacterial sugar transferase CJO92_RS21225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO92_RS21225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO92_RS21230 PF14602 Hexapeptide repeat of succinyl-transferase CJO92_RS21230 PF12464 Maltose acetyltransferase CJO92_RS21250 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO92_RS21250 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO92_RS21250 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO92_RS21255 PF02350 UDP-N-acetylglucosamine 2-epimerase CJO92_RS21260 PF02706 Chain length determinant protein CJO92_RS21260 PF13807 G-rich domain on putative tyrosine kinase CJO92_RS21260 PF13614 AAA domain CJO92_RS21265 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJO92_RS21270 PF02563 Polysaccharide biosynthesis/export protein CJO92_RS21270 PF10531 SLBB domain CJO92_RS21295 PF02661 Fic/DOC family CJO92_RS21295 PF12728 Helix-turn-helix domain CJO92_RS21310 PF08448 PAS fold CJO92_RS21310 PF13188 PAS domain CJO92_RS21310 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS21310 PF00072 Response regulator receiver domain CJO92_RS21310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS21320 PF02203 Tar ligand binding domain homologue CJO92_RS21320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS21320 PF00672 HAMP domain CJO92_RS21345 PF00171 Aldehyde dehydrogenase family CJO92_RS21350 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO92_RS21355 PF00005 ABC transporter CJO92_RS21355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO92_RS21360 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO92_RS21360 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS21365 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS21370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO92_RS21375 PF01266 FAD dependent oxidoreductase CJO92_RS21385 PF00171 Aldehyde dehydrogenase family CJO92_RS21395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO92_RS21400 PF00202 Aminotransferase class-III CJO92_RS21405 PF01037 Lrp/AsnC ligand binding domain CJO92_RS21415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS21415 PF04324 BFD-like [2Fe-2S] binding domain CJO92_RS21420 PF01266 FAD dependent oxidoreductase CJO92_RS21440 PF01510 N-acetylmuramoyl-L-alanine amidase CJO92_RS21450 PF01546 Peptidase family M20/M25/M40 CJO92_RS21450 PF07687 Peptidase dimerisation domain CJO92_RS21490 PF01841 Transglutaminase-like superfamily CJO92_RS21490 PF08379 Bacterial transglutaminase-like N-terminal region CJO92_RS21495 PF04168 A predicted alpha-helical domain with a conserved ER motif. CJO92_RS21495 PF14403 Circularly permuted ATP-grasp type 2 CJO92_RS21505 PF10005 zinc-ribbon domain CJO92_RS21505 PF15887 Putative zinc-binding metallo-peptidase CJO92_RS21520 PF05114 Protein of unknown function (DUF692) CJO92_RS21540 PF02321 Outer membrane efflux protein CJO92_RS21545 PF00873 AcrB/AcrD/AcrF family CJO92_RS21550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS21555 PF00072 Response regulator receiver domain CJO92_RS21555 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS21560 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS21560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS21560 PF00672 HAMP domain CJO92_RS21575 PF00873 AcrB/AcrD/AcrF family CJO92_RS21595 PF07690 Major Facilitator Superfamily CJO92_RS21600 PF00384 Molybdopterin oxidoreductase CJO92_RS21610 PF02634 FdhD/NarQ family CJO92_RS21615 PF13188 PAS domain CJO92_RS21615 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS21615 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS21615 PF00563 EAL domain CJO92_RS21620 PF02705 K+ potassium transporter CJO92_RS21625 PF00313 'Cold-shock' DNA-binding domain CJO92_RS21635 PF00171 Aldehyde dehydrogenase family CJO92_RS21640 PF00202 Aminotransferase class-III CJO92_RS21645 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS21645 PF00155 Aminotransferase class I and II CJO92_RS21650 PF06314 Acetoacetate decarboxylase (ADC) CJO92_RS21665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO92_RS21665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO92_RS21670 PF07715 TonB-dependent Receptor Plug Domain CJO92_RS21670 PF00593 TonB dependent receptor CJO92_RS21675 PF00294 pfkB family carbohydrate kinase CJO92_RS21690 PF00391 PEP-utilising enzyme, mobile domain CJO92_RS21690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJO92_RS21690 PF05524 PEP-utilising enzyme, N-terminal CJO92_RS21690 PF02896 PEP-utilising enzyme, TIM barrel domain CJO92_RS21690 PF00381 PTS HPr component phosphorylation site CJO92_RS21695 PF02264 LamB porin CJO92_RS21700 PF00251 Glycosyl hydrolases family 32 N-terminal domain CJO92_RS21700 PF08244 Glycosyl hydrolases family 32 C terminal CJO92_RS21705 PF00367 phosphotransferase system, EIIB CJO92_RS21705 PF02378 Phosphotransferase system, EIIC CJO92_RS21710 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS21770 PF07262 CDI immunity protein CJO92_RS21775 PF07262 CDI immunity protein CJO92_RS21785 PF13332 Hemagglutinin repeat CJO92_RS21785 PF05860 haemagglutination activity domain CJO92_RS21785 PF13018 Extended Signal Peptide of Type V secretion system CJO92_RS21785 PF04829 Pre-toxin domain with VENN motif CJO92_RS21790 PF02794 RTX toxin acyltransferase family CJO92_RS21795 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO92_RS21795 PF08479 POTRA domain, ShlB-type CJO92_RS21795 PF17287 POTRA domain CJO92_RS21805 PF00067 Cytochrome P450 CJO92_RS21815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO92_RS21815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO92_RS21830 PF00158 Sigma-54 interaction domain CJO92_RS21830 PF00072 Response regulator receiver domain CJO92_RS21830 PF02954 Bacterial regulatory protein, Fis family CJO92_RS21860 PF00437 Type II/IV secretion system protein CJO92_RS21870 PF04972 BON domain CJO92_RS21870 PF13629 Pilus formation protein N terminal region CJO92_RS21870 PF00263 Bacterial type II and III secretion system protein CJO92_RS21910 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS21910 PF00072 Response regulator receiver domain CJO92_RS21915 PF00563 EAL domain CJO92_RS21915 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS21915 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS21925 PF08269 Cache domain CJO92_RS21925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS21935 PF16363 GDP-mannose 4,6 dehydratase CJO92_RS21940 PF02899 Phage integrase, N-terminal SAM-like domain CJO92_RS21940 PF00589 Phage integrase family CJO92_RS21945 PF02358 Trehalose-phosphatase CJO92_RS21950 PF00982 Glycosyltransferase family 20 CJO92_RS21955 PF01047 MarR family CJO92_RS21960 PF02566 OsmC-like protein CJO92_RS21965 PF07859 alpha/beta hydrolase fold CJO92_RS21975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS21975 PF03466 LysR substrate binding domain CJO92_RS21980 PF07859 alpha/beta hydrolase fold CJO92_RS21985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS21990 PF00873 AcrB/AcrD/AcrF family CJO92_RS21995 PF02321 Outer membrane efflux protein CJO92_RS22045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS22045 PF02203 Tar ligand binding domain homologue CJO92_RS22045 PF00672 HAMP domain CJO92_RS22080 PF05593 RHS Repeat CJO92_RS22080 PF05488 PAAR motif CJO92_RS22090 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS22095 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS22100 PF00072 Response regulator receiver domain CJO92_RS22100 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS22110 PF07690 Major Facilitator Superfamily CJO92_RS22115 PF07286 Protein of unknown function (DUF1445) CJO92_RS22120 PF04960 Glutaminase CJO92_RS22125 PF03466 LysR substrate binding domain CJO92_RS22125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS22130 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS22135 PF08402 TOBE domain CJO92_RS22135 PF00005 ABC transporter CJO92_RS22145 PF03459 TOBE domain CJO92_RS22145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS22155 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS22155 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS22155 PF00563 EAL domain CJO92_RS22175 PF06906 Protein of unknown function (DUF1272) CJO92_RS22195 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS22195 PF00072 Response regulator receiver domain CJO92_RS22200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS22200 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS22200 PF00672 HAMP domain CJO92_RS22225 PF05199 GMC oxidoreductase CJO92_RS22250 PF03471 Transporter associated domain CJO92_RS22250 PF03741 Integral membrane protein TerC family CJO92_RS22255 PF00034 Cytochrome c CJO92_RS22255 PF03150 Di-haem cytochrome c peroxidase CJO92_RS22260 PF04185 Phosphoesterase family CJO92_RS22290 PF00072 Response regulator receiver domain CJO92_RS22290 PF00989 PAS fold CJO92_RS22290 PF01627 Hpt domain CJO92_RS22290 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS22290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS22290 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS22295 PF01804 Penicillin amidase CJO92_RS22310 PF01418 Helix-turn-helix domain, rpiR family CJO92_RS22310 PF01380 SIS domain CJO92_RS22310 PF02685 Glucokinase CJO92_RS22315 PF07969 Amidohydrolase family CJO92_RS22325 PF02447 GntP family permease CJO92_RS22330 PF01081 KDPG and KHG aldolase CJO92_RS22335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJO92_RS22340 PF00072 Response regulator receiver domain CJO92_RS22340 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS22345 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJO92_RS22355 PF00672 HAMP domain CJO92_RS22355 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS22355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS22360 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS22360 PF00072 Response regulator receiver domain CJO92_RS22365 PF13533 Biotin-lipoyl like CJO92_RS22370 PF00873 AcrB/AcrD/AcrF family CJO92_RS22375 PF00873 AcrB/AcrD/AcrF family CJO92_RS22380 PF02321 Outer membrane efflux protein CJO92_RS22390 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS22390 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS22390 PF00563 EAL domain CJO92_RS22405 PF02322 Cytochrome bd terminal oxidase subunit II CJO92_RS22410 PF01654 Cytochrome bd terminal oxidase subunit I CJO92_RS22415 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS22415 PF13188 PAS domain CJO92_RS22415 PF00563 EAL domain CJO92_RS22415 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS22420 PF02203 Tar ligand binding domain homologue CJO92_RS22420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS22420 PF00672 HAMP domain CJO92_RS22430 PF13396 Phospholipase_D-nuclease N-terminal CJO92_RS22430 PF13091 PLD-like domain CJO92_RS22440 PF01554 MatE CJO92_RS22450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO92_RS22450 PF01568 Molydopterin dinucleotide binding domain CJO92_RS22450 PF04324 BFD-like [2Fe-2S] binding domain CJO92_RS22450 PF00384 Molybdopterin oxidoreductase CJO92_RS22455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS22455 PF04324 BFD-like [2Fe-2S] binding domain CJO92_RS22455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJO92_RS22455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO92_RS22455 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJO92_RS22460 PF13806 Rieske-like [2Fe-2S] domain CJO92_RS22465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO92_RS22465 PF04324 BFD-like [2Fe-2S] binding domain CJO92_RS22465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS22465 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJO92_RS22465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJO92_RS22470 PF07690 Major Facilitator Superfamily CJO92_RS22475 PF08447 PAS fold CJO92_RS22475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS22480 PF00072 Response regulator receiver domain CJO92_RS22495 PF00296 Luciferase-like monooxygenase CJO92_RS22505 PF00561 alpha/beta hydrolase fold CJO92_RS22510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS22515 PF03737 Aldolase/RraA CJO92_RS22520 PF00155 Aminotransferase class I and II CJO92_RS22525 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO92_RS22525 PF03737 Aldolase/RraA CJO92_RS22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS22535 PF03466 LysR substrate binding domain CJO92_RS22560 PF00585 C-terminal regulatory domain of Threonine dehydratase CJO92_RS22560 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS22570 PF04264 YceI-like domain CJO92_RS22580 PF13406 Transglycosylase SLT domain CJO92_RS22590 PF01654 Cytochrome bd terminal oxidase subunit I CJO92_RS22595 PF02322 Cytochrome bd terminal oxidase subunit II CJO92_RS22600 PF02558 Ketopantoate reductase PanE/ApbA CJO92_RS22600 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJO92_RS22610 PF01042 Endoribonuclease L-PSP CJO92_RS22615 PF12833 Helix-turn-helix domain CJO92_RS22645 PF07804 HipA-like C-terminal domain CJO92_RS22645 PF13657 HipA N-terminal domain CJO92_RS22655 PF07690 Major Facilitator Superfamily CJO92_RS22660 PF03466 LysR substrate binding domain CJO92_RS22660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS22665 PF02525 Flavodoxin-like fold CJO92_RS22690 PF02910 Fumarate reductase flavoprotein C-term CJO92_RS22690 PF00890 FAD binding domain CJO92_RS22695 PF01925 Sulfite exporter TauE/SafE CJO92_RS22700 PF13193 AMP-binding enzyme C-terminal domain CJO92_RS22700 PF00501 AMP-binding enzyme CJO92_RS22710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS22710 PF03466 LysR substrate binding domain CJO92_RS22715 PF01925 Sulfite exporter TauE/SafE CJO92_RS22745 PF05552 Conserved TM helix CJO92_RS22750 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CJO92_RS22755 PF00580 UvrD/REP helicase N-terminal domain CJO92_RS22755 PF13361 UvrD-like helicase C-terminal domain CJO92_RS22770 PF07690 Major Facilitator Superfamily CJO92_RS22775 PF00206 Lyase CJO92_RS22775 PF10415 Fumarase C C-terminus CJO92_RS22780 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CJO92_RS22780 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS22785 PF05567 Neisseria PilC beta-propeller domain CJO92_RS22805 PF00114 Pilin (bacterial filament) CJO92_RS22805 PF07963 Prokaryotic N-terminal methylation motif CJO92_RS22825 PF02675 S-adenosylmethionine decarboxylase CJO92_RS22845 PF03994 Domain of Unknown Function (DUF350) CJO92_RS22860 PF13458 Periplasmic binding protein CJO92_RS22875 PF00005 ABC transporter CJO92_RS22875 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO92_RS22880 PF00005 ABC transporter CJO92_RS22895 PF01738 Dienelactone hydrolase family CJO92_RS22925 PF13181 Tetratricopeptide repeat CJO92_RS22935 PF00072 Response regulator receiver domain CJO92_RS22935 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS22940 PF17200 Single Cache domain 2 CJO92_RS22940 PF07730 Histidine kinase CJO92_RS22955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO92_RS22955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS22960 PF03831 PhnA domain CJO92_RS22960 PF08274 PhnA Zinc-Ribbon CJO92_RS22965 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CJO92_RS22990 PF11339 Protein of unknown function (DUF3141) CJO92_RS22995 PF01515 Phosphate acetyl/butaryl transferase CJO92_RS23000 PF00871 Acetokinase family CJO92_RS23015 PF00939 Sodium:sulfate symporter transmembrane region CJO92_RS23025 PF09084 NMT1/THI5 like CJO92_RS23035 PF02325 YGGT family CJO92_RS23050 PF12706 Beta-lactamase superfamily domain CJO92_RS23055 PF04539 Sigma-70 region 3 CJO92_RS23055 PF04545 Sigma-70, region 4 CJO92_RS23055 PF04542 Sigma-70 region 2 CJO92_RS23065 PF00448 SRP54-type protein, GTPase domain CJO92_RS23070 PF00771 FHIPEP family CJO92_RS23075 PF01312 FlhB HrpN YscU SpaS Family CJO92_RS23080 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS23080 PF17938 Tetracyclin repressor-like, C-terminal domain CJO92_RS23085 PF07690 Major Facilitator Superfamily CJO92_RS23090 PF01220 Dehydroquinase class II CJO92_RS23095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJO92_RS23095 PF08501 Shikimate dehydrogenase substrate binding domain CJO92_RS23100 PF13609 Gram-negative porin CJO92_RS23105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO92_RS23105 PF01261 Xylose isomerase-like TIM barrel CJO92_RS23110 PF04344 Chemotaxis phosphatase, CheZ CJO92_RS23115 PF00072 Response regulator receiver domain CJO92_RS23120 PF00072 Response regulator receiver domain CJO92_RS23120 PF01339 CheB methylesterase CJO92_RS23125 PF03975 CheD chemotactic sensory transduction CJO92_RS23130 PF01739 CheR methyltransferase, SAM binding domain CJO92_RS23130 PF03705 CheR methyltransferase, all-alpha domain CJO92_RS23135 PF02203 Tar ligand binding domain homologue CJO92_RS23135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS23135 PF00672 HAMP domain CJO92_RS23140 PF01584 CheW-like domain CJO92_RS23145 PF09078 CheY binding CJO92_RS23145 PF01584 CheW-like domain CJO92_RS23145 PF02895 Signal transducing histidine kinase, homodimeric domain CJO92_RS23145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS23145 PF01627 Hpt domain CJO92_RS23150 PF00072 Response regulator receiver domain CJO92_RS23155 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJO92_RS23155 PF00691 OmpA family CJO92_RS23160 PF01618 MotA/TolQ/ExbB proton channel family CJO92_RS23165 PF05280 Flagellar transcriptional activator (FlhC) CJO92_RS23170 PF05247 Flagellar transcriptional activator (FlhD) CJO92_RS23200 PF04717 Type VI secretion system, phage-baseplate injector CJO92_RS23200 PF13296 Putative type VI secretion system Rhs element Vgr CJO92_RS23200 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJO92_RS23205 PF02515 CoA-transferase family III CJO92_RS23210 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CJO92_RS23210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJO92_RS23215 PF07690 Major Facilitator Superfamily CJO92_RS23220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS23220 PF03466 LysR substrate binding domain CJO92_RS23225 PF04303 PrpF protein CJO92_RS23230 PF04909 Amidohydrolase CJO92_RS23235 PF03737 Aldolase/RraA CJO92_RS23240 PF13609 Gram-negative porin CJO92_RS23250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS23250 PF16736 Single Cache-like CJO92_RS23250 PF00989 PAS fold CJO92_RS23250 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS23255 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS23255 PF00072 Response regulator receiver domain CJO92_RS23280 PF00224 Pyruvate kinase, barrel domain CJO92_RS23280 PF02887 Pyruvate kinase, alpha/beta domain CJO92_RS23285 PF13660 Domain of unknown function (DUF4147) CJO92_RS23285 PF05161 MOFRL family CJO92_RS23290 PF03466 LysR substrate binding domain CJO92_RS23290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS23320 PF00005 ABC transporter CJO92_RS23325 PF12704 MacB-like periplasmic core domain CJO92_RS23325 PF00005 ABC transporter CJO92_RS23325 PF02687 FtsX-like permease family CJO92_RS23350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS23350 PF03466 LysR substrate binding domain CJO92_RS23360 PF00248 Aldo/keto reductase family CJO92_RS23365 PF00107 Zinc-binding dehydrogenase CJO92_RS23365 PF08240 Alcohol dehydrogenase GroES-like domain CJO92_RS23380 PF00561 alpha/beta hydrolase fold CJO92_RS23395 PF12146 Serine aminopeptidase, S33 CJO92_RS23420 PF12706 Beta-lactamase superfamily domain CJO92_RS23425 PF00440 Bacterial regulatory proteins, tetR family CJO92_RS23435 PF00211 Adenylate and Guanylate cyclase catalytic domain CJO92_RS23445 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CJO92_RS23445 PF00326 Prolyl oligopeptidase family CJO92_RS23455 PF00313 'Cold-shock' DNA-binding domain CJO92_RS23465 PF01176 Translation initiation factor 1A / IF-1 CJO92_RS23475 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJO92_RS23505 PF00106 short chain dehydrogenase CJO92_RS23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS23510 PF03466 LysR substrate binding domain CJO92_RS23515 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO92_RS23515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO92_RS23545 PF00691 OmpA family CJO92_RS23565 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO92_RS23565 PF01799 [2Fe-2S] binding domain CJO92_RS23570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO92_RS23575 PF00248 Aldo/keto reductase family CJO92_RS23595 PF03358 NADPH-dependent FMN reductase CJO92_RS23600 PF02254 TrkA-N domain CJO92_RS23600 PF00999 Sodium/hydrogen exchanger family CJO92_RS23620 PF01553 Acyltransferase CJO92_RS23625 PF00072 Response regulator receiver domain CJO92_RS23625 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS23630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJO92_RS23630 PF07730 Histidine kinase CJO92_RS23630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS23630 PF00672 HAMP domain CJO92_RS23635 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJO92_RS23640 PF02665 Nitrate reductase gamma subunit CJO92_RS23645 PF02613 Nitrate reductase delta subunit CJO92_RS23650 PF13247 4Fe-4S dicluster domain CJO92_RS23650 PF14711 Respiratory nitrate reductase beta C-terminal CJO92_RS23655 PF14710 Respiratory nitrate reductase alpha N-terminal CJO92_RS23655 PF01568 Molydopterin dinucleotide binding domain CJO92_RS23655 PF00384 Molybdopterin oxidoreductase CJO92_RS23660 PF07690 Major Facilitator Superfamily CJO92_RS23665 PF07690 Major Facilitator Superfamily CJO92_RS23685 PF13545 Crp-like helix-turn-helix domain CJO92_RS23685 PF00027 Cyclic nucleotide-binding domain CJO92_RS23690 PF08859 DGC domain CJO92_RS23695 PF02036 SCP-2 sterol transfer family CJO92_RS23700 PF01136 Peptidase family U32 CJO92_RS23705 PF01136 Peptidase family U32 CJO92_RS23710 PF00392 Bacterial regulatory proteins, gntR family CJO92_RS23710 PF07702 UTRA domain CJO92_RS23715 PF00005 ABC transporter CJO92_RS23720 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS23750 PF00072 Response regulator receiver domain CJO92_RS23750 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS23760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS23760 PF03466 LysR substrate binding domain CJO92_RS23770 PF00291 Pyridoxal-phosphate dependent enzyme CJO92_RS23775 PF08348 YheO-like PAS domain CJO92_RS23775 PF13309 HTH domain CJO92_RS23800 PF04055 Radical SAM superfamily CJO92_RS23800 PF13186 Iron-sulfur cluster-binding domain CJO92_RS23840 PF00149 Calcineurin-like phosphoesterase CJO92_RS23865 PF01381 Helix-turn-helix CJO92_RS23875 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CJO92_RS23875 PF12833 Helix-turn-helix domain CJO92_RS23880 PF00106 short chain dehydrogenase CJO92_RS23910 PF00583 Acetyltransferase (GNAT) family CJO92_RS23920 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CJO92_RS23940 PF01266 FAD dependent oxidoreductase CJO92_RS23945 PF03377 TAL effector repeat CJO92_RS23960 PF00202 Aminotransferase class-III CJO92_RS24035 PF13419 Haloacid dehalogenase-like hydrolase CJO92_RS24070 PF00916 Sulfate permease family CJO92_RS24070 PF01740 STAS domain CJO92_RS24085 PF03706 Lysylphosphatidylglycerol synthase TM region CJO92_RS24085 PF09924 Uncharacterised conserved protein (DUF2156) CJO92_RS24095 PF00563 EAL domain CJO92_RS24095 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS24095 PF13188 PAS domain CJO92_RS24095 PF03707 Bacterial signalling protein N terminal repeat CJO92_RS24125 PF03171 2OG-Fe(II) oxygenase superfamily CJO92_RS24125 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CJO92_RS24130 PF07731 Multicopper oxidase CJO92_RS24130 PF07732 Multicopper oxidase CJO92_RS24155 PF13145 PPIC-type PPIASE domain CJO92_RS24160 PF17287 POTRA domain CJO92_RS24160 PF08479 POTRA domain, ShlB-type CJO92_RS24160 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO92_RS24170 PF04829 Pre-toxin domain with VENN motif CJO92_RS24170 PF15526 Novel toxin 21 CJO92_RS24170 PF05594 Haemagluttinin repeat CJO92_RS24170 PF13332 Hemagglutinin repeat CJO92_RS24170 PF05860 haemagglutination activity domain CJO92_RS24225 PF13180 PDZ domain CJO92_RS24230 PF08521 Two-component sensor kinase N-terminal CJO92_RS24230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS24230 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS24235 PF00486 Transcriptional regulatory protein, C terminal CJO92_RS24235 PF00072 Response regulator receiver domain CJO92_RS24240 PF05819 NolX protein CJO92_RS24245 PF01380 SIS domain CJO92_RS24245 PF02685 Glucokinase CJO92_RS24245 PF01418 Helix-turn-helix domain, rpiR family CJO92_RS24250 PF02685 Glucokinase CJO92_RS24255 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJO92_RS24260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJO92_RS24260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJO92_RS24265 PF00920 Dehydratase family CJO92_RS24285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO92_RS24290 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO92_RS24295 PF00510 Cytochrome c oxidase subunit III CJO92_RS24300 PF00510 Cytochrome c oxidase subunit III CJO92_RS24315 PF05819 NolX protein CJO92_RS24325 PF07690 Major Facilitator Superfamily CJO92_RS24335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS24335 PF03466 LysR substrate binding domain CJO92_RS24340 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO92_RS24350 PF00528 Binding-protein-dependent transport system inner membrane component CJO92_RS24355 PF00491 Arginase family CJO92_RS24360 PF00196 Bacterial regulatory proteins, luxR family CJO92_RS24360 PF03472 Autoinducer binding domain CJO92_RS24375 PF00199 Catalase CJO92_RS24375 PF06628 Catalase-related immune-responsive CJO92_RS24385 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO92_RS24390 PF01266 FAD dependent oxidoreductase CJO92_RS24390 PF05690 Thiazole biosynthesis protein ThiG CJO92_RS24395 PF00171 Aldehyde dehydrogenase family CJO92_RS24400 PF13458 Periplasmic binding protein CJO92_RS24405 PF03466 LysR substrate binding domain CJO92_RS24405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO92_RS24410 PF13609 Gram-negative porin CJO92_RS24415 PF07690 Major Facilitator Superfamily CJO92_RS24425 PF00873 AcrB/AcrD/AcrF family CJO92_RS24430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO92_RS24435 PF02321 Outer membrane efflux protein CJO92_RS24455 PF08946 Osmosensory transporter coiled coil CJO92_RS24455 PF00083 Sugar (and other) transporter CJO92_RS24460 PF01425 Amidase CJO92_RS24465 PF01042 Endoribonuclease L-PSP CJO92_RS24470 PF01266 FAD dependent oxidoreductase CJO92_RS24520 PF00171 Aldehyde dehydrogenase family CJO92_RS24525 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO92_RS24530 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO92_RS24535 PF07690 Major Facilitator Superfamily CJO92_RS24540 PF08666 SAF domain CJO92_RS24540 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJO92_RS24545 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS24550 PF02195 ParB-like nuclease domain CJO92_RS24560 PF01507 Phosphoadenosine phosphosulfate reductase family CJO92_RS24560 PF11922 Domain of unknown function (DUF3440) CJO92_RS24575 PF09456 RcsC Alpha-Beta-Loop (ABL) CJO92_RS24575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS24575 PF00072 Response regulator receiver domain CJO92_RS24575 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS24580 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS24580 PF01590 GAF domain CJO92_RS24580 PF00360 Phytochrome region CJO92_RS24580 PF00563 EAL domain CJO92_RS24585 PF02560 Cyanate lyase C-terminal domain CJO92_RS24590 PF04966 Carbohydrate-selective porin, OprB family CJO92_RS24595 PF13407 Periplasmic binding protein domain CJO92_RS24600 PF00005 ABC transporter CJO92_RS24605 PF02653 Branched-chain amino acid transport system / permease component CJO92_RS24610 PF01370 NAD dependent epimerase/dehydratase family CJO92_RS24615 PF00356 Bacterial regulatory proteins, lacI family CJO92_RS24625 PF12833 Helix-turn-helix domain CJO92_RS24630 PF00106 short chain dehydrogenase CJO92_RS24650 PF03929 PepSY-associated TM region CJO92_RS24665 PF00563 EAL domain CJO92_RS24665 PF00360 Phytochrome region CJO92_RS24665 PF00990 Diguanylate cyclase, GGDEF domain CJO92_RS24665 PF01590 GAF domain CJO92_RS24670 PF00072 Response regulator receiver domain CJO92_RS24670 PF01339 CheB methylesterase CJO92_RS24675 PF01584 CheW-like domain CJO92_RS24675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO92_RS24675 PF01627 Hpt domain CJO92_RS24675 PF00072 Response regulator receiver domain CJO92_RS24685 PF01739 CheR methyltransferase, SAM binding domain CJO92_RS24695 PF02743 Cache domain CJO92_RS24695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO92_RS24695 PF00672 HAMP domain CJO92_RS24705 PF08281 Sigma-70, region 4 CJO92_RS24705 PF04542 Sigma-70 region 2 CJO92_RS24745 PF00550 Phosphopantetheine attachment site CJO92_RS24765 PF00009 Elongation factor Tu GTP binding domain CJO92_RS24765 PF16658 Class II release factor RF3, C-terminal domain CJO92_RS24765 PF03144 Elongation factor Tu domain 2 CJO92_RS24790 PF02954 Bacterial regulatory protein, Fis family CJO92_RS24790 PF00072 Response regulator receiver domain CJO92_RS24790 PF00158 Sigma-54 interaction domain CJO92_RS24795 PF01590 GAF domain CJO92_RS24795 PF00158 Sigma-54 interaction domain CJO92_RS24795 PF02954 Bacterial regulatory protein, Fis family CJO92_RS24805 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJO92_RS24805 PF04963 Sigma-54 factor, core binding domain CJO92_RS24805 PF04552 Sigma-54, DNA binding domain CJO92_RS24830 PF00512 His Kinase A (phospho-acceptor) domain CJO92_RS24830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase