locus-tag class description CJO83_RS00005 PF11638 DnaA N-terminal domain CJO83_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CJO83_RS00005 PF00308 Bacterial dnaA protein CJO83_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CJO83_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CJO83_RS00010 PF02767 DNA polymerase III beta subunit, central domain CJO83_RS00015 PF00204 DNA gyrase B CJO83_RS00015 PF18053 DNA gyrase B subunit insert domain CJO83_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS00015 PF01751 Toprim domain CJO83_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CJO83_RS00050 PF13737 Transposase DDE domain CJO83_RS00125 PF01062 Bestrophin, RFP-TM, chloride channel CJO83_RS00130 PF02661 Fic/DOC family CJO83_RS00135 PF00672 HAMP domain CJO83_RS00135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS00135 PF02203 Tar ligand binding domain homologue CJO83_RS00145 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS00150 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS00155 PF00005 ABC transporter CJO83_RS00160 PF01266 FAD dependent oxidoreductase CJO83_RS00175 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS00175 PF00072 Response regulator receiver domain CJO83_RS00180 PF08521 Two-component sensor kinase N-terminal CJO83_RS00180 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS00195 PF07690 Major Facilitator Superfamily CJO83_RS00210 PF00042 Globin CJO83_RS00210 PF00970 Oxidoreductase FAD-binding domain CJO83_RS00210 PF00175 Oxidoreductase NAD-binding domain CJO83_RS00215 PF02082 Transcriptional regulator CJO83_RS00220 PF02384 N-6 DNA Methylase CJO83_RS00220 PF12161 HsdM N-terminal domain CJO83_RS00235 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS00235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS00240 PF00072 Response regulator receiver domain CJO83_RS00240 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS00265 PF00563 EAL domain CJO83_RS00265 PF01590 GAF domain CJO83_RS00265 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS00265 PF00360 Phytochrome region CJO83_RS00270 PF03180 NLPA lipoprotein CJO83_RS00275 PF13493 Domain of unknown function (DUF4118) CJO83_RS00275 PF13492 GAF domain CJO83_RS00275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS00275 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS00275 PF02702 Osmosensitive K+ channel His kinase sensor domain CJO83_RS00280 PF02669 K+-transporting ATPase, c chain CJO83_RS00290 PF03814 Potassium-transporting ATPase A subunit CJO83_RS00325 PF01048 Phosphorylase superfamily CJO83_RS00335 PF00005 ABC transporter CJO83_RS00345 PF00708 Acylphosphatase CJO83_RS00355 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJO83_RS00360 PF02515 CoA-transferase family III CJO83_RS00380 PF03776 Septum formation topological specificity factor MinE CJO83_RS00385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO83_RS00390 PF05209 Septum formation inhibitor MinC, N-terminal domain CJO83_RS00390 PF03775 Septum formation inhibitor MinC, C-terminal domain CJO83_RS00395 PF02872 5'-nucleotidase, C-terminal domain CJO83_RS00395 PF00149 Calcineurin-like phosphoesterase CJO83_RS00405 PF02558 Ketopantoate reductase PanE/ApbA CJO83_RS00405 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJO83_RS00415 PF00216 Bacterial DNA-binding protein CJO83_RS00430 PF01329 Pterin 4 alpha carbinolamine dehydratase CJO83_RS00435 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CJO83_RS00440 PF01037 Lrp/AsnC ligand binding domain CJO83_RS00445 PF07947 YhhN family CJO83_RS00450 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJO83_RS00455 PF03922 OmpW family CJO83_RS00465 PF00403 Heavy-metal-associated domain CJO83_RS00470 PF00376 MerR family regulatory protein CJO83_RS00470 PF09278 MerR, DNA binding CJO83_RS00475 PF12147 Putative methyltransferase CJO83_RS00475 PF12146 Serine aminopeptidase, S33 CJO83_RS00480 PF00732 GMC oxidoreductase CJO83_RS00480 PF05199 GMC oxidoreductase CJO83_RS00485 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS00485 PF00005 ABC transporter CJO83_RS00490 PF00005 ABC transporter CJO83_RS00500 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS00520 PF01925 Sulfite exporter TauE/SafE CJO83_RS00540 PF12843 Putative quorum-sensing-regulated virulence factor CJO83_RS00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS00545 PF03466 LysR substrate binding domain CJO83_RS00565 PF13932 GidA associated domain CJO83_RS00565 PF01134 Glucose inhibited division protein A CJO83_RS00570 PF02527 rRNA small subunit methyltransferase G CJO83_RS00575 PF13614 AAA domain CJO83_RS00580 PF02195 ParB-like nuclease domain CJO83_RS00580 PF17762 HTH domain found in ParB protein CJO83_RS00590 PF00119 ATP synthase A chain CJO83_RS00595 PF00137 ATP synthase subunit C CJO83_RS00600 PF00430 ATP synthase B/B' CF(0) CJO83_RS00605 PF00213 ATP synthase delta (OSCP) subunit CJO83_RS00610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO83_RS00610 PF00306 ATP synthase alpha/beta chain, C terminal domain CJO83_RS00610 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO83_RS00615 PF00231 ATP synthase CJO83_RS00620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO83_RS00620 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO83_RS00625 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJO83_RS00625 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJO83_RS00640 PF13380 CoA binding domain CJO83_RS00645 PF07859 alpha/beta hydrolase fold CJO83_RS00655 PF12849 PBP superfamily domain CJO83_RS00660 PF02798 Glutathione S-transferase, N-terminal domain CJO83_RS00660 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS00670 PF02743 Cache domain CJO83_RS00670 PF00672 HAMP domain CJO83_RS00670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS00690 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJO83_RS00695 PF18074 Primosomal protein N C-terminal domain CJO83_RS00695 PF17764 3′ DNA-binding domain (3′BD) CJO83_RS00695 PF00270 DEAD/DEAH box helicase CJO83_RS00695 PF00271 Helicase conserved C-terminal domain CJO83_RS00695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJO83_RS00700 PF01619 Proline dehydrogenase CJO83_RS00700 PF00171 Aldehyde dehydrogenase family CJO83_RS00700 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJO83_RS00700 PF14850 DNA-binding domain of Proline dehydrogenase CJO83_RS00705 PF13458 Periplasmic binding protein CJO83_RS00715 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJO83_RS00720 PF03169 OPT oligopeptide transporter protein CJO83_RS00725 PF03315 Serine dehydratase beta chain CJO83_RS00725 PF03313 Serine dehydratase alpha chain CJO83_RS00730 PF02347 Glycine cleavage system P-protein CJO83_RS00735 PF01597 Glycine cleavage H-protein CJO83_RS00740 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJO83_RS00740 PF01571 Aminomethyltransferase folate-binding domain CJO83_RS00760 PF00580 UvrD/REP helicase N-terminal domain CJO83_RS00760 PF13361 UvrD-like helicase C-terminal domain CJO83_RS00780 PF03472 Autoinducer binding domain CJO83_RS00780 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS00785 PF00765 Autoinducer synthase CJO83_RS00795 PF06969 HemN C-terminal domain CJO83_RS00795 PF04055 Radical SAM superfamily CJO83_RS00800 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJO83_RS00800 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJO83_RS00805 PF01261 Xylose isomerase-like TIM barrel CJO83_RS00810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO83_RS00810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO83_RS00810 PF00205 Thiamine pyrophosphate enzyme, central domain CJO83_RS00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS00815 PF03466 LysR substrate binding domain CJO83_RS00830 PF09186 Domain of unknown function (DUF1949) CJO83_RS00830 PF01205 Uncharacterized protein family UPF0029 CJO83_RS00840 PF00375 Sodium:dicarboxylate symporter family CJO83_RS00845 PF03561 Allantoicase repeat CJO83_RS00850 PF04115 Ureidoglycolate lyase CJO83_RS00855 PF01546 Peptidase family M20/M25/M40 CJO83_RS00855 PF07687 Peptidase dimerisation domain CJO83_RS00865 PF03960 ArsC family CJO83_RS00880 PF00753 Metallo-beta-lactamase superfamily CJO83_RS00885 PF05036 Sporulation related domain CJO83_RS00885 PF03330 Lytic transglycolase CJO83_RS00890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO83_RS00895 PF02021 Uncharacterised protein family UPF0102 CJO83_RS00910 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS00910 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding CJO83_RS00910 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJO83_RS00915 PF00892 EamA-like transporter family CJO83_RS00950 PF08534 Redoxin CJO83_RS00955 PF02872 5'-nucleotidase, C-terminal domain CJO83_RS00955 PF00149 Calcineurin-like phosphoesterase CJO83_RS00995 PF00239 Resolvase, N terminal domain CJO83_RS00995 PF02796 Helix-turn-helix domain of resolvase CJO83_RS01015 PF12728 Helix-turn-helix domain CJO83_RS01075 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH CJO83_RS01095 PF01555 DNA methylase CJO83_RS01100 PF18755 Restriction Enzyme Adenine Methylase Associated CJO83_RS01100 PF01555 DNA methylase CJO83_RS01200 PF00816 H-NS histone family CJO83_RS01210 PF05598 Transposase domain (DUF772) CJO83_RS01210 PF01609 Transposase DDE domain CJO83_RS01290 PF04829 Pre-toxin domain with VENN motif CJO83_RS01290 PF13332 Hemagglutinin repeat CJO83_RS01290 PF05860 haemagglutination activity domain CJO83_RS01290 PF05860 haemagglutination activity domain CJO83_RS01290 PF13332 Hemagglutinin repeat CJO83_RS01290 PF04829 Pre-toxin domain with VENN motif CJO83_RS01300 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO83_RS01300 PF08479 POTRA domain, ShlB-type CJO83_RS01300 PF17287 POTRA domain CJO83_RS01310 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJO83_RS01365 PF13181 Tetratricopeptide repeat CJO83_RS01375 PF00072 Response regulator receiver domain CJO83_RS01375 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS01385 PF05175 Methyltransferase small domain CJO83_RS01390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS01390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO83_RS01405 PF01609 Transposase DDE domain CJO83_RS01405 PF13006 Insertion element 4 transposase N-terminal CJO83_RS01410 PF00313 'Cold-shock' DNA-binding domain CJO83_RS01430 PF01609 Transposase DDE domain CJO83_RS01430 PF05598 Transposase domain (DUF772) CJO83_RS01455 PF01381 Helix-turn-helix CJO83_RS01480 PF00360 Phytochrome region CJO83_RS01480 PF00563 EAL domain CJO83_RS01480 PF01590 GAF domain CJO83_RS01480 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS01495 PF13180 PDZ domain CJO83_RS01505 PF00106 short chain dehydrogenase CJO83_RS01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS01515 PF02203 Tar ligand binding domain homologue CJO83_RS01515 PF00672 HAMP domain CJO83_RS01540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO83_RS01540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO83_RS01545 PF00107 Zinc-binding dehydrogenase CJO83_RS01545 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS01550 PF02954 Bacterial regulatory protein, Fis family CJO83_RS01550 PF01590 GAF domain CJO83_RS01550 PF00158 Sigma-54 interaction domain CJO83_RS01555 PF00171 Aldehyde dehydrogenase family CJO83_RS01560 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJO83_RS01565 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJO83_RS01570 PF08411 Exonuclease C-terminal CJO83_RS01570 PF00929 Exonuclease CJO83_RS01600 PF00155 Aminotransferase class I and II CJO83_RS01600 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS01615 PF00482 Type II secretion system (T2SS), protein F CJO83_RS01620 PF00437 Type II/IV secretion system protein CJO83_RS01625 PF00263 Bacterial type II and III secretion system protein CJO83_RS01625 PF03958 Bacterial type II/III secretion system short domain CJO83_RS01650 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS01650 PF11612 Type II secretion system (T2SS), protein J CJO83_RS01655 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS01655 PF02501 Type II secretion system (T2SS), protein I CJO83_RS01660 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS01660 PF12019 Type II transport protein GspH CJO83_RS01665 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS01665 PF08334 Type II secretion system (T2SS), protein G CJO83_RS01680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO83_RS01685 PF01037 Lrp/AsnC ligand binding domain CJO83_RS01695 PF05922 Peptidase inhibitor I9 CJO83_RS01695 PF02225 PA domain CJO83_RS01695 PF13860 FlgD Ig-like domain CJO83_RS01695 PF00082 Subtilase family CJO83_RS01715 PF02525 Flavodoxin-like fold CJO83_RS01720 PF02254 TrkA-N domain CJO83_RS01720 PF00999 Sodium/hydrogen exchanger family CJO83_RS01745 PF01546 Peptidase family M20/M25/M40 CJO83_RS01745 PF07687 Peptidase dimerisation domain CJO83_RS01755 PF13609 Gram-negative porin CJO83_RS01760 PF01609 Transposase DDE domain CJO83_RS01760 PF13006 Insertion element 4 transposase N-terminal CJO83_RS01765 PF03401 Tripartite tricarboxylate transporter family receptor CJO83_RS01770 PF00072 Response regulator receiver domain CJO83_RS01770 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS01775 PF01355 High potential iron-sulfur protein CJO83_RS01795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO83_RS01820 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS01820 PF00072 Response regulator receiver domain CJO83_RS01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS01820 PF09456 RcsC Alpha-Beta-Loop (ABL) CJO83_RS01825 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS01825 PF00072 Response regulator receiver domain CJO83_RS01830 PF01545 Cation efflux family CJO83_RS01830 PF16916 Dimerisation domain of Zinc Transporter CJO83_RS01865 PF07690 Major Facilitator Superfamily CJO83_RS01870 PF00924 Mechanosensitive ion channel CJO83_RS01885 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS01885 PF00072 Response regulator receiver domain CJO83_RS01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS01890 PF00672 HAMP domain CJO83_RS01890 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS01905 PF07690 Major Facilitator Superfamily CJO83_RS01910 PF07690 Major Facilitator Superfamily CJO83_RS01920 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJO83_RS01925 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJO83_RS01945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJO83_RS01945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJO83_RS01960 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS01970 PF17912 MalK OB fold domain CJO83_RS01970 PF00005 ABC transporter CJO83_RS01975 PF00005 ABC transporter CJO83_RS01975 PF17912 MalK OB fold domain CJO83_RS01980 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJO83_RS01980 PF01266 FAD dependent oxidoreductase CJO83_RS01985 PF00455 DeoR C terminal sensor domain CJO83_RS01985 PF08220 DeoR-like helix-turn-helix domain CJO83_RS02035 PF03143 Elongation factor Tu C-terminal domain CJO83_RS02035 PF03144 Elongation factor Tu domain 2 CJO83_RS02035 PF00009 Elongation factor Tu GTP binding domain CJO83_RS02050 PF02357 Transcription termination factor nusG CJO83_RS02050 PF00467 KOW motif CJO83_RS02055 PF00298 Ribosomal protein L11, RNA binding domain CJO83_RS02055 PF03946 Ribosomal protein L11, N-terminal domain CJO83_RS02060 PF00687 Ribosomal protein L1p/L10e family CJO83_RS02065 PF00466 Ribosomal protein L10 CJO83_RS02070 PF16320 Ribosomal protein L7/L12 dimerisation domain CJO83_RS02070 PF00542 Ribosomal protein L7/L12 C-terminal domain CJO83_RS02075 PF04565 RNA polymerase Rpb2, domain 3 CJO83_RS02075 PF04561 RNA polymerase Rpb2, domain 2 CJO83_RS02075 PF00562 RNA polymerase Rpb2, domain 6 CJO83_RS02075 PF10385 RNA polymerase beta subunit external 1 domain CJO83_RS02075 PF04560 RNA polymerase Rpb2, domain 7 CJO83_RS02075 PF04563 RNA polymerase beta subunit CJO83_RS02080 PF00623 RNA polymerase Rpb1, domain 2 CJO83_RS02080 PF04983 RNA polymerase Rpb1, domain 3 CJO83_RS02080 PF05000 RNA polymerase Rpb1, domain 4 CJO83_RS02080 PF04997 RNA polymerase Rpb1, domain 1 CJO83_RS02080 PF04998 RNA polymerase Rpb1, domain 5 CJO83_RS02085 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) CJO83_RS02090 PF06672 Protein of unknown function (DUF1175) CJO83_RS02095 PF00207 Alpha-2-macroglobulin family CJO83_RS02095 PF01835 MG2 domain CJO83_RS02095 PF07703 Alpha-2-macroglobulin bait region domain CJO83_RS02100 PF10062 Predicted secreted protein (DUF2300) CJO83_RS02100 PF08486 Stage II sporulation protein CJO83_RS02105 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CJO83_RS02110 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) CJO83_RS02120 PF09382 RQC domain CJO83_RS02120 PF16124 RecQ zinc-binding CJO83_RS02120 PF00570 HRDC domain CJO83_RS02120 PF00271 Helicase conserved C-terminal domain CJO83_RS02120 PF00270 DEAD/DEAH box helicase CJO83_RS02125 PF00164 Ribosomal protein S12/S23 CJO83_RS02130 PF00177 Ribosomal protein S7p/S5e CJO83_RS02135 PF03764 Elongation factor G, domain IV CJO83_RS02135 PF03144 Elongation factor Tu domain 2 CJO83_RS02135 PF14492 Elongation Factor G, domain II CJO83_RS02135 PF00679 Elongation factor G C-terminus CJO83_RS02135 PF00009 Elongation factor Tu GTP binding domain CJO83_RS02140 PF03143 Elongation factor Tu C-terminal domain CJO83_RS02140 PF03144 Elongation factor Tu domain 2 CJO83_RS02140 PF00009 Elongation factor Tu GTP binding domain CJO83_RS02145 PF00338 Ribosomal protein S10p/S20e CJO83_RS02150 PF00297 Ribosomal protein L3 CJO83_RS02155 PF00573 Ribosomal protein L4/L1 family CJO83_RS02160 PF00276 Ribosomal protein L23 CJO83_RS02165 PF00181 Ribosomal Proteins L2, RNA binding domain CJO83_RS02165 PF03947 Ribosomal Proteins L2, C-terminal domain CJO83_RS02170 PF00203 Ribosomal protein S19 CJO83_RS02175 PF00237 Ribosomal protein L22p/L17e CJO83_RS02180 PF00189 Ribosomal protein S3, C-terminal domain CJO83_RS02180 PF07650 KH domain CJO83_RS02185 PF00252 Ribosomal protein L16p/L10e CJO83_RS02190 PF00831 Ribosomal L29 protein CJO83_RS02195 PF00366 Ribosomal protein S17 CJO83_RS02200 PF00238 Ribosomal protein L14p/L23e CJO83_RS02205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJO83_RS02210 PF00281 Ribosomal protein L5 CJO83_RS02210 PF00673 ribosomal L5P family C-terminus CJO83_RS02215 PF00253 Ribosomal protein S14p/S29e CJO83_RS02220 PF00410 Ribosomal protein S8 CJO83_RS02225 PF00347 Ribosomal protein L6 CJO83_RS02230 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJO83_RS02235 PF00333 Ribosomal protein S5, N-terminal domain CJO83_RS02235 PF03719 Ribosomal protein S5, C-terminal domain CJO83_RS02240 PF00327 Ribosomal protein L30p/L7e CJO83_RS02245 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJO83_RS02250 PF00344 SecY translocase CJO83_RS02255 PF01176 Translation initiation factor 1A / IF-1 CJO83_RS02260 PF00444 Ribosomal protein L36 CJO83_RS02265 PF00416 Ribosomal protein S13/S18 CJO83_RS02270 PF00411 Ribosomal protein S11 CJO83_RS02275 PF01479 S4 domain CJO83_RS02275 PF00163 Ribosomal protein S4/S9 N-terminal domain CJO83_RS02280 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJO83_RS02280 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJO83_RS02280 PF01000 RNA polymerase Rpb3/RpoA insert domain CJO83_RS02285 PF01196 Ribosomal protein L17 CJO83_RS02295 PF11412 Disulphide bond corrector protein DsbC CJO83_RS02295 PF02683 Cytochrome C biogenesis protein transmembrane region CJO83_RS02300 PF00490 Delta-aminolevulinic acid dehydratase CJO83_RS02305 PF01926 50S ribosome-binding GTPase CJO83_RS02310 PF00034 Cytochrome c CJO83_RS02315 PF05140 ResB-like family CJO83_RS02320 PF01578 Cytochrome C assembly protein CJO83_RS02330 PF08281 Sigma-70, region 4 CJO83_RS02330 PF04542 Sigma-70 region 2 CJO83_RS02340 PF00174 Oxidoreductase molybdopterin binding domain CJO83_RS02345 PF01794 Ferric reductase like transmembrane component CJO83_RS02350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO83_RS02350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO83_RS02360 PF01491 Frataxin-like domain CJO83_RS02365 PF13006 Insertion element 4 transposase N-terminal CJO83_RS02365 PF01609 Transposase DDE domain CJO83_RS02370 PF00912 Transglycosylase CJO83_RS02370 PF00905 Penicillin binding protein transpeptidase domain CJO83_RS02370 PF17092 Penicillin-binding protein OB-like domain CJO83_RS02375 PF11104 Type IV pilus assembly protein PilM; CJO83_RS02380 PF05137 Fimbrial assembly protein (PilN) CJO83_RS02395 PF00263 Bacterial type II and III secretion system protein CJO83_RS02395 PF07660 Secretin and TonB N terminus short domain CJO83_RS02395 PF11741 AMIN domain CJO83_RS02395 PF03958 Bacterial type II/III secretion system short domain CJO83_RS02400 PF01202 Shikimate kinase CJO83_RS02405 PF01761 3-dehydroquinate synthase CJO83_RS02410 PF13286 Phosphohydrolase-associated domain CJO83_RS02410 PF01966 HD domain CJO83_RS02415 PF03922 OmpW family CJO83_RS02425 PF04898 Glutamate synthase central domain CJO83_RS02425 PF01493 GXGXG motif CJO83_RS02425 PF00310 Glutamine amidotransferases class-II CJO83_RS02425 PF01645 Conserved region in glutamate synthase CJO83_RS02430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS02430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO83_RS02435 PF03401 Tripartite tricarboxylate transporter family receptor CJO83_RS02440 PF00005 ABC transporter CJO83_RS02445 PF02405 Permease MlaE CJO83_RS02450 PF02470 MlaD protein CJO83_RS02455 PF04333 MlaA lipoprotein CJO83_RS02470 PF00005 ABC transporter CJO83_RS02475 PF01061 ABC-2 type transporter CJO83_RS02485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJO83_RS02490 PF01634 ATP phosphoribosyltransferase CJO83_RS02495 PF00815 Histidinol dehydrogenase CJO83_RS02500 PF00155 Aminotransferase class I and II CJO83_RS02505 PF00475 Imidazoleglycerol-phosphate dehydratase CJO83_RS02510 PF01914 MarC family integral membrane protein CJO83_RS02515 PF00117 Glutamine amidotransferase class-I CJO83_RS02520 PF00977 Histidine biosynthesis protein CJO83_RS02525 PF00977 Histidine biosynthesis protein CJO83_RS02530 PF01502 Phosphoribosyl-AMP cyclohydrolase CJO83_RS02535 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJO83_RS02545 PF02416 mttA/Hcf106 family CJO83_RS02550 PF02416 mttA/Hcf106 family CJO83_RS02555 PF00902 Sec-independent protein translocase protein (TatC) CJO83_RS02560 PF03459 TOBE domain CJO83_RS02560 PF00005 ABC transporter CJO83_RS02560 PF17912 MalK OB fold domain CJO83_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS02575 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS02575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS02580 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS02580 PF00072 Response regulator receiver domain CJO83_RS02590 PF13609 Gram-negative porin CJO83_RS02595 PF17820 PDZ domain CJO83_RS02595 PF13180 PDZ domain CJO83_RS02600 PF01784 NIF3 (NGG1p interacting factor 3) CJO83_RS02605 PF01741 Large-conductance mechanosensitive channel, MscL CJO83_RS02610 PF00355 Rieske [2Fe-2S] domain CJO83_RS02610 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJO83_RS02615 PF00032 Cytochrome b(C-terminal)/b6/petD CJO83_RS02615 PF00033 Cytochrome b/b6/petB CJO83_RS02620 PF02167 Cytochrome C1 family CJO83_RS02625 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS02625 PF02798 Glutathione S-transferase, N-terminal domain CJO83_RS02630 PF04386 Stringent starvation protein B CJO83_RS02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS02645 PF00072 Response regulator receiver domain CJO83_RS02660 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS02660 PF00593 TonB dependent receptor CJO83_RS02665 PF04773 FecR protein CJO83_RS02665 PF16220 Domain of unknown function (DUF4880) CJO83_RS02675 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO83_RS02675 PF06481 COX Aromatic Rich Motif CJO83_RS02680 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS02685 PF00510 Cytochrome c oxidase subunit III CJO83_RS02690 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJO83_RS02695 PF00005 ABC transporter CJO83_RS02695 PF12848 ABC transporter CJO83_RS02715 PF00535 Glycosyl transferase family 2 CJO83_RS02720 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJO83_RS02730 PF02441 Flavoprotein CJO83_RS02735 PF00462 Glutaredoxin CJO83_RS02740 PF05175 Methyltransferase small domain CJO83_RS02740 PF17827 PrmC N-terminal domain CJO83_RS02750 PF03462 PCRF domain CJO83_RS02750 PF00472 RF-1 domain CJO83_RS02755 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CJO83_RS02755 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CJO83_RS02755 PF01488 Shikimate / quinate 5-dehydrogenase CJO83_RS02765 PF01926 50S ribosome-binding GTPase CJO83_RS02765 PF06071 Protein of unknown function (DUF933) CJO83_RS02775 PF01464 Transglycosylase SLT domain CJO83_RS02790 PF01494 FAD binding domain CJO83_RS02795 PF10411 Disulfide bond isomerase protein N-terminus CJO83_RS02795 PF13098 Thioredoxin-like domain CJO83_RS02800 PF00107 Zinc-binding dehydrogenase CJO83_RS02800 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS02810 PF12805 FUSC-like inner membrane protein yccS CJO83_RS02825 PF03167 Uracil DNA glycosylase superfamily CJO83_RS02835 PF00218 Indole-3-glycerol phosphate synthase CJO83_RS02840 PF00591 Glycosyl transferase family, a/b domain CJO83_RS02840 PF02885 Glycosyl transferase family, helical bundle domain CJO83_RS02850 PF00117 Glutamine amidotransferase class-I CJO83_RS02855 PF00425 chorismate binding enzyme CJO83_RS02855 PF04715 Anthranilate synthase component I, N terminal region CJO83_RS02860 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS02865 PF00834 Ribulose-phosphate 3 epimerase family CJO83_RS02870 PF04379 ApaG domain CJO83_RS02885 PF14535 AMP-binding enzyme C-terminal domain CJO83_RS02885 PF00501 AMP-binding enzyme CJO83_RS02890 PF03061 Thioesterase superfamily CJO83_RS02895 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS02900 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS02930 PF01546 Peptidase family M20/M25/M40 CJO83_RS02930 PF07687 Peptidase dimerisation domain CJO83_RS02940 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS02945 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO83_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS02950 PF00005 ABC transporter CJO83_RS02950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO83_RS02955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO83_RS02955 PF00005 ABC transporter CJO83_RS02960 PF13006 Insertion element 4 transposase N-terminal CJO83_RS02960 PF01609 Transposase DDE domain CJO83_RS02970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJO83_RS02975 PF00294 pfkB family carbohydrate kinase CJO83_RS02980 PF05524 PEP-utilising enzyme, N-terminal CJO83_RS02980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJO83_RS02980 PF00391 PEP-utilising enzyme, mobile domain CJO83_RS02980 PF02896 PEP-utilising enzyme, TIM barrel domain CJO83_RS02980 PF00381 PTS HPr component phosphorylation site CJO83_RS02985 PF00356 Bacterial regulatory proteins, lacI family CJO83_RS02990 PF01568 Molydopterin dinucleotide binding domain CJO83_RS02990 PF00384 Molybdopterin oxidoreductase CJO83_RS02990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO83_RS03000 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS03000 PF00501 AMP-binding enzyme CJO83_RS03005 PF07690 Major Facilitator Superfamily CJO83_RS03005 PF00083 Sugar (and other) transporter CJO83_RS03010 PF13609 Gram-negative porin CJO83_RS03015 PF03232 Ubiquinone biosynthesis protein COQ7 CJO83_RS03020 PF02381 MraZ protein, putative antitoxin-like CJO83_RS03025 PF01795 MraW methylase family CJO83_RS03035 PF03717 Penicillin-binding Protein dimerisation domain CJO83_RS03035 PF00905 Penicillin binding protein transpeptidase domain CJO83_RS03040 PF02875 Mur ligase family, glutamate ligase domain CJO83_RS03040 PF08245 Mur ligase middle domain CJO83_RS03045 PF02875 Mur ligase family, glutamate ligase domain CJO83_RS03045 PF08245 Mur ligase middle domain CJO83_RS03045 PF01225 Mur ligase family, catalytic domain CJO83_RS03050 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJO83_RS03050 PF00953 Glycosyl transferase family 4 CJO83_RS03055 PF08245 Mur ligase middle domain CJO83_RS03055 PF02875 Mur ligase family, glutamate ligase domain CJO83_RS03060 PF01098 Cell cycle protein CJO83_RS03065 PF03033 Glycosyltransferase family 28 N-terminal domain CJO83_RS03065 PF04101 Glycosyltransferase family 28 C-terminal domain CJO83_RS03070 PF08245 Mur ligase middle domain CJO83_RS03070 PF01225 Mur ligase family, catalytic domain CJO83_RS03070 PF02875 Mur ligase family, glutamate ligase domain CJO83_RS03075 PF01820 D-ala D-ala ligase N-terminus CJO83_RS03075 PF07478 D-ala D-ala ligase C-terminus CJO83_RS03080 PF08478 POTRA domain, FtsQ-type CJO83_RS03080 PF03799 Cell division protein FtsQ CJO83_RS03085 PF02491 SHS2 domain inserted in FTSA CJO83_RS03090 PF00091 Tubulin/FtsZ family, GTPase domain CJO83_RS03090 PF12327 FtsZ family, C-terminal domain CJO83_RS03095 PF08534 Redoxin CJO83_RS03100 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJO83_RS03110 PF01476 LysM domain CJO83_RS03110 PF01551 Peptidase family M23 CJO83_RS03110 PF08525 Opacity-associated protein A N-terminal motif CJO83_RS03115 PF07516 SecA Wing and Scaffold domain CJO83_RS03115 PF02810 SEC-C motif CJO83_RS03115 PF01043 SecA preprotein cross-linking domain CJO83_RS03115 PF07517 SecA DEAD-like domain CJO83_RS03120 PF01960 ArgJ family CJO83_RS03130 PF00293 NUDIX domain CJO83_RS03135 PF03884 DNA gyrase inhibitor YacG CJO83_RS03140 PF07072 Cell division protein CJO83_RS03145 PF01121 Dephospho-CoA kinase CJO83_RS03150 PF01478 Type IV leader peptidase family CJO83_RS03150 PF06750 Bacterial Peptidase A24 N-terminal domain CJO83_RS03155 PF00482 Type II secretion system (T2SS), protein F CJO83_RS03160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CJO83_RS03160 PF00437 Type II/IV secretion system protein CJO83_RS03165 PF00571 CBS domain CJO83_RS03165 PF03471 Transporter associated domain CJO83_RS03165 PF01595 Cyclin M transmembrane N-terminal domain CJO83_RS03175 PF00348 Polyprenyl synthetase CJO83_RS03180 PF00829 Ribosomal prokaryotic L21 protein CJO83_RS03185 PF01016 Ribosomal L27 protein CJO83_RS03190 PF01926 50S ribosome-binding GTPase CJO83_RS03190 PF01018 GTP1/OBG CJO83_RS03195 PF00696 Amino acid kinase family CJO83_RS03195 PF01472 PUA domain CJO83_RS03205 PF00293 NUDIX domain CJO83_RS03210 PF03129 Anticodon binding domain CJO83_RS03210 PF04073 Aminoacyl-tRNA editing domain CJO83_RS03210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO83_RS03215 PF01464 Transglycosylase SLT domain CJO83_RS03225 PF01914 MarC family integral membrane protein CJO83_RS03230 PF00156 Phosphoribosyl transferase domain CJO83_RS03235 PF02978 Signal peptide binding domain CJO83_RS03235 PF00448 SRP54-type protein, GTPase domain CJO83_RS03235 PF02881 SRP54-type protein, helical bundle domain CJO83_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS03250 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS03255 PF00158 Sigma-54 interaction domain CJO83_RS03255 PF02954 Bacterial regulatory protein, Fis family CJO83_RS03255 PF00072 Response regulator receiver domain CJO83_RS03260 PF01510 N-acetylmuramoyl-L-alanine amidase CJO83_RS03265 PF00317 Ribonucleotide reductase, all-alpha domain CJO83_RS03265 PF03477 ATP cone domain CJO83_RS03265 PF02867 Ribonucleotide reductase, barrel domain CJO83_RS03275 PF13737 Transposase DDE domain CJO83_RS03345 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS03345 PF06715 Gp5 C-terminal repeat (3 copies) CJO83_RS03390 PF05598 Transposase domain (DUF772) CJO83_RS03390 PF01609 Transposase DDE domain CJO83_RS03410 PF00268 Ribonucleotide reductase, small chain CJO83_RS03420 PF00892 EamA-like transporter family CJO83_RS03425 PF01037 Lrp/AsnC ligand binding domain CJO83_RS03435 PF00672 HAMP domain CJO83_RS03435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS03435 PF02203 Tar ligand binding domain homologue CJO83_RS03480 PF00294 pfkB family carbohydrate kinase CJO83_RS03485 PF08534 Redoxin CJO83_RS03500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO83_RS03500 PF02785 Biotin carboxylase C-terminal domain CJO83_RS03500 PF00289 Biotin carboxylase, N-terminal domain CJO83_RS03505 PF00364 Biotin-requiring enzyme CJO83_RS03510 PF01220 Dehydroquinase class II CJO83_RS03515 PF00085 Thioredoxin CJO83_RS03525 PF01225 Mur ligase family, catalytic domain CJO83_RS03525 PF02875 Mur ligase family, glutamate ligase domain CJO83_RS03525 PF08245 Mur ligase middle domain CJO83_RS03530 PF05728 Uncharacterised protein family (UPF0227) CJO83_RS03535 PF04345 Chorismate lyase CJO83_RS03540 PF00773 RNB domain CJO83_RS03550 PF08501 Shikimate dehydrogenase substrate binding domain CJO83_RS03550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJO83_RS03550 PF01488 Shikimate / quinate 5-dehydrogenase CJO83_RS03555 PF00912 Transglycosylase CJO83_RS03565 PF01544 CorA-like Mg2+ transporter protein CJO83_RS03570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJO83_RS03580 PF02464 Competence-damaged protein CJO83_RS03580 PF00994 Probable molybdopterin binding domain CJO83_RS03580 PF18146 Damage-inducible protein CinA KH domain CJO83_RS03585 PF04608 Phosphatidylglycerophosphatase A CJO83_RS03590 PF02769 AIR synthase related protein, C-terminal domain CJO83_RS03590 PF00586 AIR synthase related protein, N-terminal domain CJO83_RS03595 PF00390 Malic enzyme, N-terminal domain CJO83_RS03595 PF03949 Malic enzyme, NAD binding domain CJO83_RS03595 PF01515 Phosphate acetyl/butaryl transferase CJO83_RS03615 PF04452 RNA methyltransferase CJO83_RS03625 PF03466 LysR substrate binding domain CJO83_RS03625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS03630 PF13609 Gram-negative porin CJO83_RS03640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJO83_RS03645 PF00005 ABC transporter CJO83_RS03650 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS03655 PF08450 SMP-30/Gluconolactonase/LRE-like region CJO83_RS03670 PF01081 KDPG and KHG aldolase CJO83_RS03675 PF13378 Enolase C-terminal domain-like CJO83_RS03675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO83_RS03680 PF02779 Transketolase, pyrimidine binding domain CJO83_RS03680 PF02780 Transketolase, C-terminal domain CJO83_RS03680 PF00456 Transketolase, thiamine diphosphate binding domain CJO83_RS03685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJO83_RS03685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJO83_RS03690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS03690 PF03466 LysR substrate binding domain CJO83_RS03695 PF01475 Ferric uptake regulator family CJO83_RS03700 PF04355 SmpA / OmlA family CJO83_RS03705 PF05173 Dihydrodipicolinate reductase, C-terminus CJO83_RS03705 PF01113 Dihydrodipicolinate reductase, N-terminus CJO83_RS03710 PF09334 tRNA synthetases class I (M) CJO83_RS03710 PF08264 Anticodon-binding domain of tRNA CJO83_RS03710 PF13603 Leucyl-tRNA synthetase, Domain 2 CJO83_RS03710 PF00133 tRNA synthetases class I (I, L, M and V) CJO83_RS03720 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CJO83_RS03720 PF06144 DNA polymerase III, delta subunit CJO83_RS03725 PF00171 Aldehyde dehydrogenase family CJO83_RS03730 PF03653 Uncharacterised protein family (UPF0093) CJO83_RS03735 PF01170 Putative RNA methylase family UPF0020 CJO83_RS03735 PF02926 THUMP domain CJO83_RS03740 PF02954 Bacterial regulatory protein, Fis family CJO83_RS03740 PF00072 Response regulator receiver domain CJO83_RS03740 PF00158 Sigma-54 interaction domain CJO83_RS03745 PF00989 PAS fold CJO83_RS03745 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS03750 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS03760 PF00072 Response regulator receiver domain CJO83_RS03765 PF02233 NAD(P) transhydrogenase beta subunit CJO83_RS03770 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJO83_RS03775 PF02261 Aspartate decarboxylase CJO83_RS03780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJO83_RS03780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJO83_RS03785 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS03785 PF00593 TonB dependent receptor CJO83_RS03795 PF07690 Major Facilitator Superfamily CJO83_RS03800 PF13533 Biotin-lipoyl like CJO83_RS03810 PF00293 NUDIX domain CJO83_RS03820 PF01645 Conserved region in glutamate synthase CJO83_RS03825 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS03825 PF13417 Glutathione S-transferase, N-terminal domain CJO83_RS03830 PF00206 Lyase CJO83_RS03830 PF08328 Adenylosuccinate lyase C-terminal CJO83_RS03835 PF01292 Prokaryotic cytochrome b561 CJO83_RS03840 PF04264 YceI-like domain CJO83_RS03845 PF04264 YceI-like domain CJO83_RS03850 PF02355 Protein export membrane protein CJO83_RS03850 PF07549 SecD/SecF GG Motif CJO83_RS03855 PF02355 Protein export membrane protein CJO83_RS03855 PF13721 SecD export protein N-terminal TM region CJO83_RS03855 PF07549 SecD/SecF GG Motif CJO83_RS03860 PF02699 Preprotein translocase subunit CJO83_RS03865 PF01702 Queuine tRNA-ribosyltransferase CJO83_RS03870 PF02547 Queuosine biosynthesis protein CJO83_RS03875 PF00271 Helicase conserved C-terminal domain CJO83_RS03875 PF00270 DEAD/DEAH box helicase CJO83_RS03875 PF17191 RecG wedge domain CJO83_RS03895 PF14031 Putative serine dehydratase domain CJO83_RS03895 PF01168 Alanine racemase, N-terminal domain CJO83_RS03900 PF03466 LysR substrate binding domain CJO83_RS03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS03905 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS03915 PF01037 Lrp/AsnC ligand binding domain CJO83_RS03920 PF07687 Peptidase dimerisation domain CJO83_RS03920 PF01546 Peptidase family M20/M25/M40 CJO83_RS03925 PF04101 Glycosyltransferase family 28 C-terminal domain CJO83_RS03940 PF13737 Transposase DDE domain CJO83_RS03950 PF01609 Transposase DDE domain CJO83_RS03950 PF05598 Transposase domain (DUF772) CJO83_RS03980 PF00313 'Cold-shock' DNA-binding domain CJO83_RS04055 PF03466 LysR substrate binding domain CJO83_RS04055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS04070 PF00210 Ferritin-like domain CJO83_RS04075 PF01040 UbiA prenyltransferase family CJO83_RS04085 PF03807 NADP oxidoreductase coenzyme F420-dependent CJO83_RS04085 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJO83_RS04090 PF01168 Alanine racemase, N-terminal domain CJO83_RS04095 PF00437 Type II/IV secretion system protein CJO83_RS04100 PF00437 Type II/IV secretion system protein CJO83_RS04135 PF00255 Glutathione peroxidase CJO83_RS04145 PF07883 Cupin domain CJO83_RS04155 PF04172 LrgB-like family CJO83_RS04160 PF03788 LrgA family CJO83_RS04165 PF13183 4Fe-4S dicluster domain CJO83_RS04165 PF02754 Cysteine-rich domain CJO83_RS04170 PF01565 FAD binding domain CJO83_RS04175 PF01565 FAD binding domain CJO83_RS04175 PF02913 FAD linked oxidases, C-terminal domain CJO83_RS04180 PF03466 LysR substrate binding domain CJO83_RS04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS04185 PF02913 FAD linked oxidases, C-terminal domain CJO83_RS04185 PF01565 FAD binding domain CJO83_RS04190 PF01923 Cobalamin adenosyltransferase CJO83_RS04195 PF00924 Mechanosensitive ion channel CJO83_RS04195 PF05552 Conserved TM helix CJO83_RS04205 PF00793 DAHP synthetase I family CJO83_RS04210 PF01523 Putative modulator of DNA gyrase CJO83_RS04215 PF00795 Carbon-nitrogen hydrolase CJO83_RS04225 PF08335 GlnD PII-uridylyltransferase CJO83_RS04225 PF03710 Glutamate-ammonia ligase adenylyltransferase CJO83_RS04235 PF00082 Subtilase family CJO83_RS04235 PF01483 Proprotein convertase P-domain CJO83_RS04240 PF00082 Subtilase family CJO83_RS04240 PF04151 Bacterial pre-peptidase C-terminal domain CJO83_RS04250 PF02463 RecF/RecN/SMC N terminal domain CJO83_RS04255 PF01513 ATP-NAD kinase CJO83_RS04260 PF01628 HrcA protein C terminal domain CJO83_RS04265 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS04265 PF07702 UTRA domain CJO83_RS04270 PF17392 Urocanase C-terminal domain CJO83_RS04270 PF01175 Urocanase Rossmann-like domain CJO83_RS04270 PF17391 Urocanase N-terminal domain CJO83_RS04275 PF00221 Aromatic amino acid lyase CJO83_RS04280 PF00491 Arginase family CJO83_RS04285 PF01979 Amidohydrolase family CJO83_RS04290 PF00762 Ferrochelatase CJO83_RS04295 PF01479 S4 domain CJO83_RS04310 PF01025 GrpE CJO83_RS04320 PF14760 Rnk N-terminus CJO83_RS04320 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO83_RS04325 PF00012 Hsp70 protein CJO83_RS04330 PF01556 DnaJ C terminal domain CJO83_RS04330 PF00226 DnaJ domain CJO83_RS04330 PF00684 DnaJ central domain CJO83_RS04335 PF00117 Glutamine amidotransferase class-I CJO83_RS04335 PF00425 chorismate binding enzyme CJO83_RS04335 PF04715 Anthranilate synthase component I, N terminal region CJO83_RS04340 PF00005 ABC transporter CJO83_RS04345 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS04350 PF02548 Ketopantoate hydroxymethyltransferase CJO83_RS04360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJO83_RS04365 PF12626 Polymerase A arginine-rich C-terminus CJO83_RS04365 PF12627 Probable RNA and SrmB- binding site of polymerase A CJO83_RS04365 PF01743 Poly A polymerase head domain CJO83_RS04375 PF00308 Bacterial dnaA protein CJO83_RS04380 PF01594 AI-2E family transporter CJO83_RS04385 PF02769 AIR synthase related protein, C-terminal domain CJO83_RS04385 PF00586 AIR synthase related protein, N-terminal domain CJO83_RS04400 PF12833 Helix-turn-helix domain CJO83_RS04400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO83_RS04400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO83_RS04400 PF02805 Metal binding domain of Ada CJO83_RS04410 PF13532 2OG-Fe(II) oxygenase superfamily CJO83_RS04415 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA CJO83_RS04420 PF02805 Metal binding domain of Ada CJO83_RS04420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO83_RS04420 PF12833 Helix-turn-helix domain CJO83_RS04420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO83_RS04425 PF00583 Acetyltransferase (GNAT) family CJO83_RS04435 PF01119 DNA mismatch repair protein, C-terminal domain CJO83_RS04435 PF08676 MutL C terminal dimerisation domain CJO83_RS04440 PF02470 MlaD protein CJO83_RS04455 PF09335 SNARE associated Golgi protein CJO83_RS04460 PF13369 Transglutaminase-like superfamily CJO83_RS04465 PF03023 Lipid II flippase MurJ CJO83_RS04470 PF01649 Ribosomal protein S20 CJO83_RS04480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJO83_RS04480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJO83_RS04490 PF00764 Arginosuccinate synthase CJO83_RS04495 PF06865 Pyrimidine/purine nucleoside phosphorylase CJO83_RS04505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJO83_RS04505 PF01565 FAD binding domain CJO83_RS04510 PF04461 Protein of unknown function (DUF520) CJO83_RS04515 PF01156 Inosine-uridine preferring nucleoside hydrolase CJO83_RS04525 PF02660 Glycerol-3-phosphate acyltransferase CJO83_RS04530 PF04073 Aminoacyl-tRNA editing domain CJO83_RS04535 PF02899 Phage integrase, N-terminal SAM-like domain CJO83_RS04535 PF00589 Phage integrase family CJO83_RS04540 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO83_RS04540 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO83_RS04550 PF08331 Domain of unknown function (DUF1730) CJO83_RS04555 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJO83_RS04560 PF01520 N-acetylmuramoyl-L-alanine amidase CJO83_RS04560 PF11741 AMIN domain CJO83_RS04565 PF13593 SBF-like CPA transporter family (DUF4137) CJO83_RS04570 PF03466 LysR substrate binding domain CJO83_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS04575 PF00171 Aldehyde dehydrogenase family CJO83_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS04580 PF03466 LysR substrate binding domain CJO83_RS04585 PF00106 short chain dehydrogenase CJO83_RS04590 PF05191 Adenylate kinase, active site lid CJO83_RS04595 PF02348 Cytidylyltransferase CJO83_RS04600 PF03966 Trm112p-like protein CJO83_RS04605 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJO83_RS04615 PF01618 MotA/TolQ/ExbB proton channel family CJO83_RS04620 PF02601 Exonuclease VII, large subunit CJO83_RS04620 PF13742 OB-fold nucleic acid binding domain CJO83_RS04625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJO83_RS04625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJO83_RS04640 PF02163 Peptidase family M50 CJO83_RS04640 PF00571 CBS domain CJO83_RS04650 PF05962 HutD CJO83_RS04655 PF00216 Bacterial DNA-binding protein CJO83_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS04705 PF01966 HD domain CJO83_RS04705 PF11871 Domain of unknown function (DUF3391) CJO83_RS04720 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS04725 PF01546 Peptidase family M20/M25/M40 CJO83_RS04725 PF07687 Peptidase dimerisation domain CJO83_RS04750 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJO83_RS04750 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJO83_RS04755 PF06029 AlkA N-terminal domain CJO83_RS04755 PF02805 Metal binding domain of Ada CJO83_RS04755 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO83_RS04755 PF12833 Helix-turn-helix domain CJO83_RS04765 PF04228 Putative neutral zinc metallopeptidase CJO83_RS04780 PF07681 DoxX CJO83_RS04785 PF07690 Major Facilitator Superfamily CJO83_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS04790 PF03466 LysR substrate binding domain CJO83_RS04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS04795 PF03466 LysR substrate binding domain CJO83_RS04800 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CJO83_RS04805 PF12706 Beta-lactamase superfamily domain CJO83_RS04815 PF03150 Di-haem cytochrome c peroxidase CJO83_RS04830 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS04835 PF00589 Phage integrase family CJO83_RS04835 PF13356 Arm DNA-binding domain CJO83_RS04915 PF00313 'Cold-shock' DNA-binding domain CJO83_RS04920 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJO83_RS04925 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS04925 PF10431 C-terminal, D2-small domain, of ClpB protein CJO83_RS04925 PF07724 AAA domain (Cdc48 subfamily) CJO83_RS04925 PF17871 AAA lid domain CJO83_RS04925 PF02861 Clp amino terminal domain, pathogenicity island component CJO83_RS04930 PF00692 dUTPase CJO83_RS04935 PF00296 Luciferase-like monooxygenase CJO83_RS04940 PF04127 DNA / pantothenate metabolism flavoprotein CJO83_RS04940 PF02441 Flavoprotein CJO83_RS04950 PF01252 Signal peptidase (SPase) II CJO83_RS04955 PF00133 tRNA synthetases class I (I, L, M and V) CJO83_RS04955 PF06827 Zinc finger found in FPG and IleRS CJO83_RS04955 PF08264 Anticodon-binding domain of tRNA CJO83_RS04960 PF06574 FAD synthetase CJO83_RS04960 PF01687 Riboflavin kinase CJO83_RS04965 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS04965 PF09308 LuxQ, periplasmic CJO83_RS04965 PF00072 Response regulator receiver domain CJO83_RS04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS04970 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS04970 PF00072 Response regulator receiver domain CJO83_RS04975 PF00551 Formyl transferase CJO83_RS04980 PF01029 NusB family CJO83_RS04980 PF01189 16S rRNA methyltransferase RsmB/F CJO83_RS04985 PF13091 PLD-like domain CJO83_RS04990 PF12795 Mechanosensitive ion channel porin domain CJO83_RS04990 PF00924 Mechanosensitive ion channel CJO83_RS04990 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJO83_RS05000 PF02445 Quinolinate synthetase A protein CJO83_RS05005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJO83_RS05005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJO83_RS05010 PF00890 FAD binding domain CJO83_RS05010 PF02910 Fumarate reductase flavoprotein C-term CJO83_RS05015 PF00471 Ribosomal protein L33 CJO83_RS05020 PF00830 Ribosomal L28 family CJO83_RS05025 PF04002 RadC-like JAB domain CJO83_RS05030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO83_RS05035 PF02401 LytB protein CJO83_RS05040 PF13458 Periplasmic binding protein CJO83_RS05045 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS05050 PF11862 Domain of unknown function (DUF3382) CJO83_RS05050 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS05055 PF00005 ABC transporter CJO83_RS05055 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS05060 PF00005 ABC transporter CJO83_RS05070 PF00202 Aminotransferase class-III CJO83_RS05075 PF00175 Oxidoreductase NAD-binding domain CJO83_RS05075 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS05075 PF00970 Oxidoreductase FAD-binding domain CJO83_RS05085 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS05105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJO83_RS05105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJO83_RS05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS05115 PF03466 LysR substrate binding domain CJO83_RS05125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJO83_RS05125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO83_RS05135 PF01507 Phosphoadenosine phosphosulfate reductase family CJO83_RS05140 PF01507 Phosphoadenosine phosphosulfate reductase family CJO83_RS05145 PF00009 Elongation factor Tu GTP binding domain CJO83_RS05150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO83_RS05175 PF02789 Cytosol aminopeptidase family, N-terminal domain CJO83_RS05175 PF00883 Cytosol aminopeptidase family, catalytic domain CJO83_RS05180 PF04364 DNA polymerase III chi subunit, HolC CJO83_RS05190 PF01609 Transposase DDE domain CJO83_RS05190 PF13006 Insertion element 4 transposase N-terminal CJO83_RS05195 PF00920 Dehydratase family CJO83_RS05200 PF03466 LysR substrate binding domain CJO83_RS05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS05205 PF01790 Prolipoprotein diacylglyceryl transferase CJO83_RS05235 PF00593 TonB dependent receptor CJO83_RS05235 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS05240 PF01032 FecCD transport family CJO83_RS05245 PF00005 ABC transporter CJO83_RS05250 PF02277 Phosphoribosyltransferase CJO83_RS05255 PF02654 Cobalamin-5-phosphate synthase CJO83_RS05265 PF01497 Periplasmic binding protein CJO83_RS05270 PF00155 Aminotransferase class I and II CJO83_RS05275 PF03186 CobD/Cbib protein CJO83_RS05275 PF17113 Regulatory signalling modulator protein AmpE CJO83_RS05280 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CJO83_RS05285 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJO83_RS05285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJO83_RS05300 PF02569 Pantoate-beta-alanine ligase CJO83_RS05305 PF02616 Segregation and condensation protein ScpA CJO83_RS05320 PF04357 TamB, inner membrane protein subunit of TAM complex CJO83_RS05330 PF09334 tRNA synthetases class I (M) CJO83_RS05330 PF01588 Putative tRNA binding domain CJO83_RS05335 PF00691 OmpA family CJO83_RS05335 PF05736 OprF membrane domain CJO83_RS05340 PF10609 NUBPL iron-transfer P-loop NTPase CJO83_RS05370 PF01568 Molydopterin dinucleotide binding domain CJO83_RS05370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO83_RS05370 PF00384 Molybdopterin oxidoreductase CJO83_RS05375 PF13247 4Fe-4S dicluster domain CJO83_RS05395 PF00080 Copper/zinc superoxide dismutase (SODC) CJO83_RS05400 PF02634 FdhD/NarQ family CJO83_RS05405 PF00692 dUTPase CJO83_RS05410 PF01276 Orn/Lys/Arg decarboxylase, major domain CJO83_RS05410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJO83_RS05410 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJO83_RS05450 PF14698 Argininosuccinate lyase C-terminal CJO83_RS05450 PF00206 Lyase CJO83_RS05475 PF00311 Phosphoenolpyruvate carboxylase CJO83_RS05480 PF03900 Porphobilinogen deaminase, C-terminal domain CJO83_RS05480 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJO83_RS05485 PF02602 Uroporphyrinogen-III synthase HemD CJO83_RS05505 PF07690 Major Facilitator Superfamily CJO83_RS05515 PF00171 Aldehyde dehydrogenase family CJO83_RS05520 PF00719 Inorganic pyrophosphatase CJO83_RS05535 PF00795 Carbon-nitrogen hydrolase CJO83_RS05535 PF02540 NAD synthase CJO83_RS05540 PF01209 ubiE/COQ5 methyltransferase family CJO83_RS05545 PF00543 Nitrogen regulatory protein P-II CJO83_RS05550 PF03458 UPF0126 domain CJO83_RS05560 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS05565 PF01580 FtsK/SpoIIIE family CJO83_RS05565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJO83_RS05565 PF09397 Ftsk gamma domain CJO83_RS05565 PF17854 FtsK alpha domain CJO83_RS05570 PF03548 Outer membrane lipoprotein carrier protein LolA CJO83_RS05580 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS05580 PF12002 MgsA AAA+ ATPase C terminal CJO83_RS05580 PF16193 AAA C-terminal domain CJO83_RS05585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO83_RS05585 PF02403 Seryl-tRNA synthetase N-terminal domain CJO83_RS05595 PF00589 Phage integrase family CJO83_RS05595 PF13356 Arm DNA-binding domain CJO83_RS05710 PF03852 DNA mismatch endonuclease Vsr CJO83_RS05715 PF00145 C-5 cytosine-specific DNA methylase CJO83_RS05725 PF02151 UvrB/uvrC motif CJO83_RS05725 PF17757 UvrB interaction domain CJO83_RS05725 PF12344 Ultra-violet resistance protein B CJO83_RS05725 PF00271 Helicase conserved C-terminal domain CJO83_RS05725 PF04851 Type III restriction enzyme, res subunit CJO83_RS05760 PF09588 YqaJ-like viral recombinase domain CJO83_RS05810 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS05810 PF06715 Gp5 C-terminal repeat (3 copies) CJO83_RS05855 PF01047 MarR family CJO83_RS05860 PF07690 Major Facilitator Superfamily CJO83_RS05865 PF07690 Major Facilitator Superfamily CJO83_RS05870 PF13411 MerR HTH family regulatory protein CJO83_RS05875 PF00106 short chain dehydrogenase CJO83_RS05880 PF13404 AsnC-type helix-turn-helix domain CJO83_RS05880 PF01037 Lrp/AsnC ligand binding domain CJO83_RS05890 PF01037 Lrp/AsnC ligand binding domain CJO83_RS05900 PF07690 Major Facilitator Superfamily CJO83_RS05915 PF00072 Response regulator receiver domain CJO83_RS05915 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS05920 PF07730 Histidine kinase CJO83_RS05920 PF17200 Single Cache domain 2 CJO83_RS05925 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS05925 PF08334 Type II secretion system (T2SS), protein G CJO83_RS05930 PF00482 Type II secretion system (T2SS), protein F CJO83_RS05935 PF00437 Type II/IV secretion system protein CJO83_RS05960 PF00263 Bacterial type II and III secretion system protein CJO83_RS05960 PF03958 Bacterial type II/III secretion system short domain CJO83_RS05970 PF08334 Type II secretion system (T2SS), protein G CJO83_RS05970 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS05985 PF00394 Multicopper oxidase CJO83_RS05985 PF07732 Multicopper oxidase CJO83_RS06020 PF01464 Transglycosylase SLT domain CJO83_RS06040 PF00578 AhpC/TSA family CJO83_RS06050 PF06903 VirK protein CJO83_RS06085 PF02627 Carboxymuconolactone decarboxylase family CJO83_RS06090 PF01595 Cyclin M transmembrane N-terminal domain CJO83_RS06090 PF00571 CBS domain CJO83_RS06090 PF03471 Transporter associated domain CJO83_RS06145 PF01266 FAD dependent oxidoreductase CJO83_RS06150 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS06155 PF00005 ABC transporter CJO83_RS06160 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS06165 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS06170 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS06180 PF01614 Bacterial transcriptional regulator CJO83_RS06180 PF09339 IclR helix-turn-helix domain CJO83_RS06185 PF01144 Coenzyme A transferase CJO83_RS06190 PF01144 Coenzyme A transferase CJO83_RS06195 PF00108 Thiolase, N-terminal domain CJO83_RS06195 PF02803 Thiolase, C-terminal domain CJO83_RS06200 PF00206 Lyase CJO83_RS06200 PF10397 Adenylosuccinate lyase C-terminus CJO83_RS06205 PF12146 Serine aminopeptidase, S33 CJO83_RS06210 PF02627 Carboxymuconolactone decarboxylase family CJO83_RS06225 PF00005 ABC transporter CJO83_RS06225 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS06230 PF00005 ABC transporter CJO83_RS06235 PF13458 Periplasmic binding protein CJO83_RS06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS06240 PF03466 LysR substrate binding domain CJO83_RS06245 PF01494 FAD binding domain CJO83_RS06250 PF03537 Glycoside-hydrolase family GH114 CJO83_RS06270 PF00483 Nucleotidyl transferase CJO83_RS06275 PF10458 Valyl tRNA synthetase tRNA binding arm CJO83_RS06275 PF00133 tRNA synthetases class I (I, L, M and V) CJO83_RS06275 PF08264 Anticodon-binding domain of tRNA CJO83_RS06280 PF00580 UvrD/REP helicase N-terminal domain CJO83_RS06280 PF13361 UvrD-like helicase C-terminal domain CJO83_RS06290 PF01636 Phosphotransferase enzyme family CJO83_RS06300 PF03641 Possible lysine decarboxylase CJO83_RS06305 PF01367 5'-3' exonuclease, C-terminal SAM fold CJO83_RS06305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJO83_RS06305 PF00476 DNA polymerase family A CJO83_RS06305 PF01612 3'-5' exonuclease CJO83_RS06310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS06315 PF01738 Dienelactone hydrolase family CJO83_RS06325 PF13006 Insertion element 4 transposase N-terminal CJO83_RS06325 PF01609 Transposase DDE domain CJO83_RS06330 PF00581 Rhodanese-like domain CJO83_RS06345 PF02609 Exonuclease VII small subunit CJO83_RS06350 PF00348 Polyprenyl synthetase CJO83_RS06355 PF02779 Transketolase, pyrimidine binding domain CJO83_RS06355 PF02780 Transketolase, C-terminal domain CJO83_RS06355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJO83_RS06360 PF02649 Type I GTP cyclohydrolase folE2 CJO83_RS06365 PF00814 Glycoprotease family CJO83_RS06375 PF09424 Yqey-like protein CJO83_RS06380 PF08275 DNA primase catalytic core, N-terminal domain CJO83_RS06380 PF08278 DNA primase DnaG DnaB-binding CJO83_RS06380 PF10410 DnaB-helicase binding domain of primase CJO83_RS06380 PF01807 CHC2 zinc finger CJO83_RS06385 PF04542 Sigma-70 region 2 CJO83_RS06385 PF04546 Sigma-70, non-essential region CJO83_RS06385 PF04539 Sigma-70 region 3 CJO83_RS06385 PF04545 Sigma-70, region 4 CJO83_RS06385 PF03979 Sigma-70 factor, region 1.1 CJO83_RS06385 PF00140 Sigma-70 factor, region 1.2 CJO83_RS06395 PF00753 Metallo-beta-lactamase superfamily CJO83_RS06405 PF01613 Flavin reductase like domain CJO83_RS06405 PF00258 Flavodoxin CJO83_RS06410 PF00270 DEAD/DEAH box helicase CJO83_RS06410 PF00271 Helicase conserved C-terminal domain CJO83_RS06415 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO83_RS06420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS06420 PF03466 LysR substrate binding domain CJO83_RS06425 PF02678 Pirin CJO83_RS06425 PF17954 Quercetinase C-terminal cupin domain CJO83_RS06430 PF03358 NADPH-dependent FMN reductase CJO83_RS06435 PF17773 UPF0176 acylphosphatase like domain CJO83_RS06440 PF14579 Helix-hairpin-helix motif CJO83_RS06440 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJO83_RS06440 PF01336 OB-fold nucleic acid binding domain CJO83_RS06440 PF02811 PHP domain CJO83_RS06440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJO83_RS06455 PF00535 Glycosyl transferase family 2 CJO83_RS06465 PF00005 ABC transporter CJO83_RS06465 PF00664 ABC transporter transmembrane region CJO83_RS06485 PF10150 Ribonuclease E/G family CJO83_RS06485 PF00575 S1 RNA binding domain CJO83_RS06490 PF02545 Maf-like protein CJO83_RS06495 PF02590 Predicted SPOUT methyltransferase CJO83_RS06505 PF01467 Cytidylyltransferase-like CJO83_RS06510 PF01218 Coproporphyrinogen III oxidase CJO83_RS06515 PF02843 Phosphoribosylglycinamide synthetase, C domain CJO83_RS06515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJO83_RS06515 PF02844 Phosphoribosylglycinamide synthetase, N domain CJO83_RS06520 PF01709 Transcriptional regulator CJO83_RS06525 PF05872 Bacterial protein of unknown function (DUF853) CJO83_RS06535 PF00892 EamA-like transporter family CJO83_RS06545 PF02142 MGS-like domain CJO83_RS06550 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS06550 PF00107 Zinc-binding dehydrogenase CJO83_RS06585 PF02608 ABC transporter substrate-binding protein PnrA-like CJO83_RS06595 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS06600 PF00005 ABC transporter CJO83_RS06605 PF07690 Major Facilitator Superfamily CJO83_RS06610 PF02682 Carboxyltransferase domain, subdomain C and D CJO83_RS06615 PF02626 Carboxyltransferase domain, subdomain A and B CJO83_RS06620 PF03746 LamB/YcsF family CJO83_RS06635 PF03480 Bacterial extracellular solute-binding protein, family 7 CJO83_RS06640 PF01470 Pyroglutamyl peptidase CJO83_RS06655 PF12706 Beta-lactamase superfamily domain CJO83_RS06665 PF04055 Radical SAM superfamily CJO83_RS06665 PF06969 HemN C-terminal domain CJO83_RS06670 PF01725 Ham1 family CJO83_RS06675 PF03725 3' exoribonuclease family, domain 2 CJO83_RS06675 PF01138 3' exoribonuclease family, domain 1 CJO83_RS06685 PF00069 Protein kinase domain CJO83_RS06685 PF08239 Bacterial SH3 domain CJO83_RS06690 PF08340 Domain of unknown function (DUF1732) CJO83_RS06690 PF03755 YicC-like family, N-terminal region CJO83_RS06695 PF00625 Guanylate kinase CJO83_RS06700 PF01192 RNA polymerase Rpb6 CJO83_RS06705 PF02824 TGS domain CJO83_RS06705 PF04607 Region found in RelA / SpoT proteins CJO83_RS06705 PF13291 ACT domain CJO83_RS06715 PF03449 Transcription elongation factor, N-terminal CJO83_RS06715 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO83_RS06735 PF04972 BON domain CJO83_RS06735 PF01476 LysM domain CJO83_RS06745 PF00294 pfkB family carbohydrate kinase CJO83_RS06750 PF08013 Tagatose 6 phosphate kinase CJO83_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS06765 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS06770 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS06775 PF00005 ABC transporter CJO83_RS06775 PF17912 MalK OB fold domain CJO83_RS06785 PF01638 HxlR-like helix-turn-helix CJO83_RS06795 PF13609 Gram-negative porin CJO83_RS06820 PF01232 Mannitol dehydrogenase Rossmann domain CJO83_RS06820 PF08125 Mannitol dehydrogenase C-terminal domain CJO83_RS06825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJO83_RS06825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJO83_RS06830 PF04198 Putative sugar-binding domain CJO83_RS06830 PF00325 Bacterial regulatory proteins, crp family CJO83_RS06840 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CJO83_RS06845 PF01433 Peptidase family M1 domain CJO83_RS06845 PF11940 Domain of unknown function (DUF3458) Ig-like fold CJO83_RS06845 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CJO83_RS06855 PF00390 Malic enzyme, N-terminal domain CJO83_RS06855 PF03949 Malic enzyme, NAD binding domain CJO83_RS06855 PF01515 Phosphate acetyl/butaryl transferase CJO83_RS06865 PF09349 OHCU decarboxylase CJO83_RS06865 PF01014 Uricase CJO83_RS06875 PF01979 Amidohydrolase family CJO83_RS06880 PF00860 Permease family CJO83_RS06890 PF00576 HIUase/Transthyretin family CJO83_RS06905 PF01609 Transposase DDE domain CJO83_RS06905 PF05598 Transposase domain (DUF772) CJO83_RS06910 PF01266 FAD dependent oxidoreductase CJO83_RS06925 PF00701 Dihydrodipicolinate synthetase family CJO83_RS06930 PF00171 Aldehyde dehydrogenase family CJO83_RS06935 PF00892 EamA-like transporter family CJO83_RS06940 PF13609 Gram-negative porin CJO83_RS06950 PF00005 ABC transporter CJO83_RS06955 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS06960 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS06970 PF07729 FCD domain CJO83_RS06970 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS06990 PF01169 Uncharacterized protein family UPF0016 CJO83_RS06995 PF01979 Amidohydrolase family CJO83_RS07000 PF00962 Adenosine/AMP deaminase CJO83_RS07010 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO83_RS07010 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO83_RS07015 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS07015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO83_RS07015 PF01799 [2Fe-2S] binding domain CJO83_RS07015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO83_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS07020 PF03466 LysR substrate binding domain CJO83_RS07025 PF12849 PBP superfamily domain CJO83_RS07055 PF03641 Possible lysine decarboxylase CJO83_RS07060 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS07060 PF08359 YsiA-like protein, C-terminal region CJO83_RS07065 PF01219 Prokaryotic diacylglycerol kinase CJO83_RS07070 PF13439 Glycosyltransferase Family 4 CJO83_RS07070 PF00534 Glycosyl transferases group 1 CJO83_RS07105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO83_RS07105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO83_RS07105 PF00205 Thiamine pyrophosphate enzyme, central domain CJO83_RS07110 PF10369 Small subunit of acetolactate synthase CJO83_RS07115 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJO83_RS07115 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJO83_RS07120 PF02666 Phosphatidylserine decarboxylase CJO83_RS07125 PF01066 CDP-alcohol phosphatidyltransferase CJO83_RS07130 PF08502 LeuA allosteric (dimerisation) domain CJO83_RS07130 PF00682 HMGL-like CJO83_RS07140 PF13458 Periplasmic binding protein CJO83_RS07145 PF00312 Ribosomal protein S15 CJO83_RS07150 PF00575 S1 RNA binding domain CJO83_RS07150 PF01138 3' exoribonuclease family, domain 1 CJO83_RS07150 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJO83_RS07150 PF00013 KH domain CJO83_RS07150 PF03725 3' exoribonuclease family, domain 2 CJO83_RS07165 PF00121 Triosephosphate isomerase CJO83_RS07170 PF03840 Preprotein translocase SecG subunit CJO83_RS07180 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJO83_RS07185 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJO83_RS07190 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJO83_RS07195 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJO83_RS07205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJO83_RS07205 PF10531 SLBB domain CJO83_RS07205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJO83_RS07210 PF00384 Molybdopterin oxidoreductase CJO83_RS07210 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJO83_RS07210 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CJO83_RS07215 PF00146 NADH dehydrogenase CJO83_RS07220 PF12838 4Fe-4S dicluster domain CJO83_RS07225 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJO83_RS07230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJO83_RS07235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJO83_RS07235 PF00361 Proton-conducting membrane transporter CJO83_RS07240 PF00361 Proton-conducting membrane transporter CJO83_RS07240 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CJO83_RS07245 PF00361 Proton-conducting membrane transporter CJO83_RS07270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS07270 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS07270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS07275 PF00171 Aldehyde dehydrogenase family CJO83_RS07275 PF01575 MaoC like domain CJO83_RS07280 PF01575 MaoC like domain CJO83_RS07290 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS07295 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS07300 PF00005 ABC transporter CJO83_RS07300 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS07305 PF00005 ABC transporter CJO83_RS07310 PF01774 UreD urease accessory protein CJO83_RS07315 PF00547 Urease, gamma subunit CJO83_RS07320 PF04955 HupE / UreJ protein CJO83_RS07325 PF00699 Urease beta subunit CJO83_RS07330 PF01979 Amidohydrolase family CJO83_RS07330 PF00449 Urease alpha-subunit, N-terminal domain CJO83_RS07335 PF05194 UreE urease accessory protein, C-terminal domain CJO83_RS07335 PF02814 UreE urease accessory protein, N-terminal domain CJO83_RS07340 PF01730 UreF CJO83_RS07345 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO83_RS07355 PF01810 LysE type translocator CJO83_RS07370 PF02798 Glutathione S-transferase, N-terminal domain CJO83_RS07370 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS07375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS07375 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS07375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS07385 PF03466 LysR substrate binding domain CJO83_RS07405 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS07410 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CJO83_RS07410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO83_RS07410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO83_RS07415 PF13417 Glutathione S-transferase, N-terminal domain CJO83_RS07415 PF14497 Glutathione S-transferase, C-terminal domain CJO83_RS07420 PF00155 Aminotransferase class I and II CJO83_RS07430 PF03883 Peroxide stress protein YaaA CJO83_RS07435 PF00246 Zinc carboxypeptidase CJO83_RS07435 PF18027 Cytosolic carboxypeptidase N-terminal domain CJO83_RS07445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO83_RS07460 PF00330 Aconitase family (aconitate hydratase) CJO83_RS07460 PF00694 Aconitase C-terminal domain CJO83_RS07465 PF03972 MmgE/PrpD family CJO83_RS07485 PF00056 lactate/malate dehydrogenase, NAD binding domain CJO83_RS07485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJO83_RS07490 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS07490 PF00155 Aminotransferase class I and II CJO83_RS07495 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJO83_RS07500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJO83_RS07505 PF02910 Fumarate reductase flavoprotein C-term CJO83_RS07505 PF00890 FAD binding domain CJO83_RS07510 PF13085 2Fe-2S iron-sulfur cluster binding domain CJO83_RS07515 PF03937 Flavinator of succinate dehydrogenase CJO83_RS07520 PF00285 Citrate synthase, C-terminal domain CJO83_RS07525 PF00330 Aconitase family (aconitate hydratase) CJO83_RS07530 PF00694 Aconitase C-terminal domain CJO83_RS07535 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS07540 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO83_RS07540 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJO83_RS07550 PF01416 tRNA pseudouridine synthase CJO83_RS07555 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJO83_RS07560 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS07565 PF01555 DNA methylase CJO83_RS07570 PF00290 Tryptophan synthase alpha chain CJO83_RS07575 PF01039 Carboxyl transferase domain CJO83_RS07575 PF17848 Acetyl-coA carboxylase zinc finger domain CJO83_RS07580 PF08245 Mur ligase middle domain CJO83_RS07580 PF02875 Mur ligase family, glutamate ligase domain CJO83_RS07595 PF00156 Phosphoribosyl transferase domain CJO83_RS07600 PF01061 ABC-2 type transporter CJO83_RS07605 PF00005 ABC transporter CJO83_RS07635 PF03928 Haem-degrading CJO83_RS07645 PF02472 Biopolymer transport protein ExbD/TolR CJO83_RS07650 PF01618 MotA/TolQ/ExbB proton channel family CJO83_RS07660 PF01434 Peptidase family M41 CJO83_RS07660 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS07660 PF17862 AAA+ lid domain CJO83_RS07680 PF00375 Sodium:dicarboxylate symporter family CJO83_RS07685 PF01177 Asp/Glu/Hydantoin racemase CJO83_RS07695 PF03350 Uncharacterized protein family, UPF0114 CJO83_RS07700 PF00892 EamA-like transporter family CJO83_RS07705 PF00501 AMP-binding enzyme CJO83_RS07705 PF16177 Acetyl-coenzyme A synthetase N-terminus CJO83_RS07705 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS07710 PF00474 Sodium:solute symporter family CJO83_RS07720 PF05598 Transposase domain (DUF772) CJO83_RS07720 PF01609 Transposase DDE domain CJO83_RS07730 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS07730 PF03472 Autoinducer binding domain CJO83_RS07735 PF02203 Tar ligand binding domain homologue CJO83_RS07735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS07735 PF00672 HAMP domain CJO83_RS07740 PF00072 Response regulator receiver domain CJO83_RS07740 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS07755 PF01799 [2Fe-2S] binding domain CJO83_RS07755 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS07760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO83_RS07775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO83_RS07780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO83_RS07780 PF00005 ABC transporter CJO83_RS07785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO83_RS07785 PF00005 ABC transporter CJO83_RS07790 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS07790 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO83_RS07795 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS07800 PF13454 FAD-NAD(P)-binding CJO83_RS07805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS07805 PF03466 LysR substrate binding domain CJO83_RS07840 PF00551 Formyl transferase CJO83_RS07845 PF00929 Exonuclease CJO83_RS07855 PF00589 Phage integrase family CJO83_RS07855 PF13356 Arm DNA-binding domain CJO83_RS07885 PF00248 Aldo/keto reductase family CJO83_RS07890 PF00264 Common central domain of tyrosinase CJO83_RS07905 PF00582 Universal stress protein family CJO83_RS07910 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS07940 PF00075 RNase H CJO83_RS07945 PF08241 Methyltransferase domain CJO83_RS07950 PF00753 Metallo-beta-lactamase superfamily CJO83_RS07950 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJO83_RS07955 PF01476 LysM domain CJO83_RS07955 PF01464 Transglycosylase SLT domain CJO83_RS07960 PF16177 Acetyl-coenzyme A synthetase N-terminus CJO83_RS07960 PF00501 AMP-binding enzyme CJO83_RS07960 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS07965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJO83_RS07965 PF00117 Glutamine amidotransferase class-I CJO83_RS07970 PF01810 LysE type translocator CJO83_RS07975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO83_RS07975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJO83_RS07975 PF02142 MGS-like domain CJO83_RS07980 PF03449 Transcription elongation factor, N-terminal CJO83_RS07980 PF01272 Transcription elongation factor, GreA/GreB, C-term CJO83_RS07990 PF01985 CRS1 / YhbY (CRM) domain CJO83_RS07995 PF01728 FtsJ-like methyltransferase CJO83_RS08000 PF17862 AAA+ lid domain CJO83_RS08000 PF06480 FtsH Extracellular CJO83_RS08000 PF01434 Peptidase family M41 CJO83_RS08000 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS08005 PF00809 Pterin binding enzyme CJO83_RS08010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJO83_RS08010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJO83_RS08010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJO83_RS08010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJO83_RS08015 PF12849 PBP superfamily domain CJO83_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS08025 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS08030 PF00005 ABC transporter CJO83_RS08035 PF01895 PhoU domain CJO83_RS08040 PF00072 Response regulator receiver domain CJO83_RS08040 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS08045 PF11808 Phosphate regulon sensor protein PhoR CJO83_RS08045 PF00989 PAS fold CJO83_RS08045 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS08050 PF17941 Polyphosphate kinase C-terminal domain 1 CJO83_RS08050 PF13089 Polyphosphate kinase N-terminal domain CJO83_RS08050 PF02503 Polyphosphate kinase middle domain CJO83_RS08050 PF13090 Polyphosphate kinase C-terminal domain 2 CJO83_RS08055 PF02541 Ppx/GppA phosphatase family CJO83_RS08080 PF01925 Sulfite exporter TauE/SafE CJO83_RS08095 PF00753 Metallo-beta-lactamase superfamily CJO83_RS08100 PF00563 EAL domain CJO83_RS08100 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS08100 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS08100 PF13188 PAS domain CJO83_RS08135 PF00589 Phage integrase family CJO83_RS08160 PF02796 Helix-turn-helix domain of resolvase CJO83_RS08160 PF00239 Resolvase, N terminal domain CJO83_RS08180 PF02954 Bacterial regulatory protein, Fis family CJO83_RS08200 PF10137 Predicted nucleotide-binding protein containing TIR-like domain CJO83_RS08210 PF00589 Phage integrase family CJO83_RS08235 PF02913 FAD linked oxidases, C-terminal domain CJO83_RS08235 PF01565 FAD binding domain CJO83_RS08245 PF03358 NADPH-dependent FMN reductase CJO83_RS08250 PF03631 Virulence factor BrkB CJO83_RS08265 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO83_RS08275 PF07690 Major Facilitator Superfamily CJO83_RS08280 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJO83_RS08280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO83_RS08285 PF01264 Chorismate synthase CJO83_RS08300 PF00072 Response regulator receiver domain CJO83_RS08300 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS08305 PF01144 Coenzyme A transferase CJO83_RS08310 PF01144 Coenzyme A transferase CJO83_RS08315 PF00106 short chain dehydrogenase CJO83_RS08325 PF01042 Endoribonuclease L-PSP CJO83_RS08330 PF04607 Region found in RelA / SpoT proteins CJO83_RS08330 PF13291 ACT domain CJO83_RS08330 PF02824 TGS domain CJO83_RS08340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO83_RS08340 PF02824 TGS domain CJO83_RS08340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJO83_RS08340 PF03129 Anticodon binding domain CJO83_RS08345 PF05198 Translation initiation factor IF-3, N-terminal domain CJO83_RS08345 PF00707 Translation initiation factor IF-3, C-terminal domain CJO83_RS08350 PF01632 Ribosomal protein L35 CJO83_RS08355 PF00453 Ribosomal protein L20 CJO83_RS08360 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJO83_RS08360 PF01409 tRNA synthetases class II core domain (F) CJO83_RS08365 PF01588 Putative tRNA binding domain CJO83_RS08365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJO83_RS08365 PF03147 Ferredoxin-fold anticodon binding domain CJO83_RS08365 PF03484 tRNA synthetase B5 domain CJO83_RS08365 PF03483 B3/4 domain CJO83_RS08370 PF00216 Bacterial DNA-binding protein CJO83_RS08395 PF00817 impB/mucB/samB family CJO83_RS08395 PF11799 impB/mucB/samB family C-terminal domain CJO83_RS08400 PF13520 Amino acid permease CJO83_RS08415 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO83_RS08420 PF01047 MarR family CJO83_RS08430 PF07969 Amidohydrolase family CJO83_RS08435 PF01432 Peptidase family M3 CJO83_RS08440 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJO83_RS08440 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJO83_RS08445 PF00072 Response regulator receiver domain CJO83_RS08445 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS08450 PF00989 PAS fold CJO83_RS08450 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS08460 PF00456 Transketolase, thiamine diphosphate binding domain CJO83_RS08460 PF17831 Pyruvate dehydrogenase E1 component middle domain CJO83_RS08465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO83_RS08465 PF02817 e3 binding domain CJO83_RS08465 PF00364 Biotin-requiring enzyme CJO83_RS08475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO83_RS08475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS08485 PF09361 Phasin protein CJO83_RS08490 PF00850 Histone deacetylase domain CJO83_RS08505 PF00881 Nitroreductase family CJO83_RS08510 PF00768 D-alanyl-D-alanine carboxypeptidase CJO83_RS08515 PF09339 IclR helix-turn-helix domain CJO83_RS08515 PF01614 Bacterial transcriptional regulator CJO83_RS08520 PF02754 Cysteine-rich domain CJO83_RS08525 PF11870 Domain of unknown function (DUF3390) CJO83_RS08525 PF02589 LUD domain CJO83_RS08525 PF13183 4Fe-4S dicluster domain CJO83_RS08540 PF04376 Arginine-tRNA-protein transferase, N terminus CJO83_RS08540 PF04377 Arginine-tRNA-protein transferase, C terminus CJO83_RS08545 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJO83_RS08565 PF01180 Dihydroorotate dehydrogenase CJO83_RS08575 PF02705 K+ potassium transporter CJO83_RS08585 PF00575 S1 RNA binding domain CJO83_RS08585 PF09371 Tex-like protein N-terminal domain CJO83_RS08585 PF16921 Tex protein YqgF-like domain CJO83_RS08585 PF17674 HHH domain CJO83_RS08600 PF04851 Type III restriction enzyme, res subunit CJO83_RS08600 PF13307 Helicase C-terminal domain CJO83_RS08605 PF13525 Outer membrane lipoprotein CJO83_RS08610 PF01479 S4 domain CJO83_RS08610 PF00849 RNA pseudouridylate synthase CJO83_RS08615 PF02578 Multi-copper polyphenol oxidoreductase laccase CJO83_RS08625 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CJO83_RS08630 PF02803 Thiolase, C-terminal domain CJO83_RS08630 PF00108 Thiolase, N-terminal domain CJO83_RS08635 PF00106 short chain dehydrogenase CJO83_RS08640 PF07879 PHB/PHA accumulation regulator DNA-binding domain CJO83_RS08640 PF05233 PHB accumulation regulatory domain CJO83_RS08645 PF01207 Dihydrouridine synthase (Dus) CJO83_RS08650 PF04055 Radical SAM superfamily CJO83_RS08650 PF00919 Uncharacterized protein family UPF0004 CJO83_RS08650 PF18693 TRAM domain CJO83_RS08655 PF00108 Thiolase, N-terminal domain CJO83_RS08655 PF02803 Thiolase, C-terminal domain CJO83_RS08665 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO83_RS08675 PF01546 Peptidase family M20/M25/M40 CJO83_RS08675 PF07687 Peptidase dimerisation domain CJO83_RS08680 PF03461 TRCF domain CJO83_RS08680 PF17757 UvrB interaction domain CJO83_RS08680 PF00271 Helicase conserved C-terminal domain CJO83_RS08680 PF00270 DEAD/DEAH box helicase CJO83_RS08680 PF02559 CarD-like/TRCF domain CJO83_RS08685 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJO83_RS08690 PF02542 YgbB family CJO83_RS08695 PF02627 Carboxymuconolactone decarboxylase family CJO83_RS08700 PF00578 AhpC/TSA family CJO83_RS08705 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS08705 PF00672 HAMP domain CJO83_RS08705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS08710 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS08710 PF00072 Response regulator receiver domain CJO83_RS08735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS08740 PF00873 AcrB/AcrD/AcrF family CJO83_RS08755 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJO83_RS08755 PF01266 FAD dependent oxidoreductase CJO83_RS08760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO83_RS08760 PF05697 Bacterial trigger factor protein (TF) CJO83_RS08760 PF05698 Bacterial trigger factor protein (TF) C-terminus CJO83_RS08765 PF00574 Clp protease CJO83_RS08770 PF07724 AAA domain (Cdc48 subfamily) CJO83_RS08770 PF06689 ClpX C4-type zinc finger CJO83_RS08770 PF10431 C-terminal, D2-small domain, of ClpB protein CJO83_RS08775 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJO83_RS08775 PF05362 Lon protease (S16) C-terminal proteolytic domain CJO83_RS08775 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS08780 PF00216 Bacterial DNA-binding protein CJO83_RS08800 PF13006 Insertion element 4 transposase N-terminal CJO83_RS08800 PF01609 Transposase DDE domain CJO83_RS08805 PF10502 Signal peptidase, peptidase S26 CJO83_RS08810 PF13472 GDSL-like Lipase/Acylhydrolase family CJO83_RS08815 PF00005 ABC transporter CJO83_RS08820 PF00342 Phosphoglucose isomerase CJO83_RS08825 PF01256 Carbohydrate kinase CJO83_RS08835 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJO83_RS08835 PF02769 AIR synthase related protein, C-terminal domain CJO83_RS08835 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CJO83_RS08855 PF13186 Iron-sulfur cluster-binding domain CJO83_RS08855 PF04055 Radical SAM superfamily CJO83_RS08875 PF03466 LysR substrate binding domain CJO83_RS08875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS08900 PF08402 TOBE domain CJO83_RS08900 PF00005 ABC transporter CJO83_RS08905 PF08521 Two-component sensor kinase N-terminal CJO83_RS08905 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS08905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS08910 PF00072 Response regulator receiver domain CJO83_RS08910 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS08915 PF13609 Gram-negative porin CJO83_RS08920 PF00005 ABC transporter CJO83_RS08945 PF00005 ABC transporter CJO83_RS08955 PF01722 BolA-like protein CJO83_RS08960 PF04279 Intracellular septation protein A CJO83_RS08965 PF01641 SelR domain CJO83_RS08970 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJO83_RS08975 PF00501 AMP-binding enzyme CJO83_RS08975 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS08985 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS08995 PF00005 ABC transporter CJO83_RS08995 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS09000 PF00005 ABC transporter CJO83_RS09010 PF00295 Glycosyl hydrolases family 28 CJO83_RS09015 PF00324 Amino acid permease CJO83_RS09020 PF00324 Amino acid permease CJO83_RS09025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO83_RS09025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO83_RS09025 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS09030 PF00857 Isochorismatase family CJO83_RS09035 PF02803 Thiolase, C-terminal domain CJO83_RS09035 PF00108 Thiolase, N-terminal domain CJO83_RS09055 PF00144 Beta-lactamase CJO83_RS09060 PF00107 Zinc-binding dehydrogenase CJO83_RS09060 PF16884 N-terminal domain of oxidoreductase CJO83_RS09065 PF00596 Class II Aldolase and Adducin N-terminal domain CJO83_RS09075 PF00106 short chain dehydrogenase CJO83_RS09080 PF00561 alpha/beta hydrolase fold CJO83_RS09085 PF00465 Iron-containing alcohol dehydrogenase CJO83_RS09090 PF07859 alpha/beta hydrolase fold CJO83_RS09115 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO83_RS09115 PF17287 POTRA domain CJO83_RS09115 PF08479 POTRA domain, ShlB-type CJO83_RS09130 PF01571 Aminomethyltransferase folate-binding domain CJO83_RS09135 PF02618 YceG-like family CJO83_RS09140 PF02223 Thymidylate kinase CJO83_RS09145 PF09115 DNA polymerase III, delta subunit, C terminal CJO83_RS09155 PF01026 TatD related DNase CJO83_RS09165 PF03781 Sulfatase-modifying factor enzyme 1 CJO83_RS09165 PF12867 DinB superfamily CJO83_RS09170 PF00356 Bacterial regulatory proteins, lacI family CJO83_RS09175 PF01547 Bacterial extracellular solute-binding protein CJO83_RS09185 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS09190 PF08402 TOBE domain CJO83_RS09190 PF00005 ABC transporter CJO83_RS09195 PF00149 Calcineurin-like phosphoesterase CJO83_RS09200 PF01510 N-acetylmuramoyl-L-alanine amidase CJO83_RS09205 PF00676 Dehydrogenase E1 component CJO83_RS09210 PF02780 Transketolase, C-terminal domain CJO83_RS09210 PF02779 Transketolase, pyrimidine binding domain CJO83_RS09215 PF02817 e3 binding domain CJO83_RS09215 PF00364 Biotin-requiring enzyme CJO83_RS09215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO83_RS09230 PF01965 DJ-1/PfpI family CJO83_RS09235 PF00654 Voltage gated chloride channel CJO83_RS09240 PF08241 Methyltransferase domain CJO83_RS09250 PF00501 AMP-binding enzyme CJO83_RS09250 PF00550 Phosphopantetheine attachment site CJO83_RS09250 PF08242 Methyltransferase domain CJO83_RS09250 PF00668 Condensation domain CJO83_RS09255 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS09255 PF00593 TonB dependent receptor CJO83_RS09260 PF00664 ABC transporter transmembrane region CJO83_RS09260 PF00005 ABC transporter CJO83_RS09260 PF04954 Siderophore-interacting protein CJO83_RS09260 PF08021 Siderophore-interacting FAD-binding domain CJO83_RS09265 PF00664 ABC transporter transmembrane region CJO83_RS09265 PF00005 ABC transporter CJO83_RS09265 PF08021 Siderophore-interacting FAD-binding domain CJO83_RS09265 PF04954 Siderophore-interacting protein CJO83_RS09270 PF00550 Phosphopantetheine attachment site CJO83_RS09270 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS09270 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS09270 PF16197 Ketoacyl-synthetase C-terminal extension CJO83_RS09270 PF00668 Condensation domain CJO83_RS09270 PF00698 Acyl transferase domain CJO83_RS09275 PF00550 Phosphopantetheine attachment site CJO83_RS09275 PF00668 Condensation domain CJO83_RS09275 PF08242 Methyltransferase domain CJO83_RS09275 PF00501 AMP-binding enzyme CJO83_RS09285 PF12833 Helix-turn-helix domain CJO83_RS09285 PF02311 AraC-like ligand binding domain CJO83_RS09290 PF03377 TAL effector repeat CJO83_RS09295 PF00583 Acetyltransferase (GNAT) family CJO83_RS09300 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CJO83_RS09330 PF17645 Arylmalonate decarboxylase CJO83_RS09335 PF00795 Carbon-nitrogen hydrolase CJO83_RS09340 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO83_RS09345 PF07883 Cupin domain CJO83_RS09350 PF01494 FAD binding domain CJO83_RS09370 PF14525 AraC-binding-like domain CJO83_RS09370 PF12833 Helix-turn-helix domain CJO83_RS09385 PF04199 Putative cyclase CJO83_RS09390 PF01613 Flavin reductase like domain CJO83_RS09395 PF17885 Styrene monooxygenase A putative substrate binding domain CJO83_RS09415 PF00155 Aminotransferase class I and II CJO83_RS09465 PF07690 Major Facilitator Superfamily CJO83_RS09470 PF13533 Biotin-lipoyl like CJO83_RS09475 PF02321 Outer membrane efflux protein CJO83_RS09490 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS09490 PF00155 Aminotransferase class I and II CJO83_RS09495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO83_RS09495 PF06481 COX Aromatic Rich Motif CJO83_RS09500 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS09550 PF00155 Aminotransferase class I and II CJO83_RS09555 PF00202 Aminotransferase class-III CJO83_RS09580 PF03466 LysR substrate binding domain CJO83_RS09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS09585 PF05981 CreA protein CJO83_RS09590 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS09590 PF01799 [2Fe-2S] binding domain CJO83_RS09595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO83_RS09595 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJO83_RS09620 PF02625 XdhC and CoxI family CJO83_RS09620 PF13478 XdhC Rossmann domain CJO83_RS09630 PF02308 MgtC family CJO83_RS09635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS09635 PF00672 HAMP domain CJO83_RS09635 PF02203 Tar ligand binding domain homologue CJO83_RS09645 PF00723 Glycosyl hydrolases family 15 CJO83_RS09655 PF00171 Aldehyde dehydrogenase family CJO83_RS09670 PF12848 ABC transporter CJO83_RS09670 PF00005 ABC transporter CJO83_RS09675 PF02016 LD-carboxypeptidase N-terminal domain CJO83_RS09675 PF17676 LD-carboxypeptidase C-terminal domain CJO83_RS09680 PF14437 MafB19-like deaminase CJO83_RS09685 PF01242 6-pyruvoyl tetrahydropterin synthase CJO83_RS09710 PF13657 HipA N-terminal domain CJO83_RS09710 PF07804 HipA-like C-terminal domain CJO83_RS09730 PF00775 Dioxygenase CJO83_RS09735 PF00775 Dioxygenase CJO83_RS09735 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CJO83_RS09740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS09740 PF03466 LysR substrate binding domain CJO83_RS09790 PF02540 NAD synthase CJO83_RS09790 PF00958 GMP synthase C terminal domain CJO83_RS09790 PF00117 Glutamine amidotransferase class-I CJO83_RS09800 PF00478 IMP dehydrogenase / GMP reductase domain CJO83_RS09800 PF00571 CBS domain CJO83_RS09805 PF00892 EamA-like transporter family CJO83_RS09815 PF03658 RnfH family Ubiquitin CJO83_RS09820 PF03364 Polyketide cyclase / dehydrase and lipid transport CJO83_RS09825 PF01668 SmpB protein CJO83_RS09830 PF16200 C-terminal region of band_7 CJO83_RS09830 PF01145 SPFH domain / Band 7 family CJO83_RS09840 PF00391 PEP-utilising enzyme, mobile domain CJO83_RS09840 PF02896 PEP-utilising enzyme, TIM barrel domain CJO83_RS09840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJO83_RS09845 PF03618 Kinase/pyrophosphorylase CJO83_RS09850 PF00588 SpoU rRNA Methylase family CJO83_RS09850 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJO83_RS09855 PF01351 Ribonuclease HII CJO83_RS09860 PF02684 Lipid-A-disaccharide synthetase CJO83_RS09865 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS09865 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJO83_RS09870 PF07977 FabA-like domain CJO83_RS09875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJO83_RS09875 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS09880 PF03938 Outer membrane protein (OmpH-like) CJO83_RS09885 PF01103 Surface antigen CJO83_RS09885 PF07244 Surface antigen variable number repeat CJO83_RS09890 PF02163 Peptidase family M50 CJO83_RS09890 PF17820 PDZ domain CJO83_RS09895 PF13288 DXP reductoisomerase C-terminal domain CJO83_RS09895 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJO83_RS09895 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJO83_RS09905 PF01255 Putative undecaprenyl diphosphate synthase CJO83_RS09910 PF01765 Ribosome recycling factor CJO83_RS09915 PF00696 Amino acid kinase family CJO83_RS09920 PF00889 Elongation factor TS CJO83_RS09925 PF00318 Ribosomal protein S2 CJO83_RS09930 PF00557 Metallopeptidase family M24 CJO83_RS09935 PF01909 Nucleotidyltransferase domain CJO83_RS09935 PF08335 GlnD PII-uridylyltransferase CJO83_RS09935 PF01966 HD domain CJO83_RS09940 PF01479 S4 domain CJO83_RS09940 PF00849 RNA pseudouridylate synthase CJO83_RS09950 PF01327 Polypeptide deformylase CJO83_RS09955 PF00533 BRCA1 C Terminus (BRCT) domain CJO83_RS09955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJO83_RS09955 PF12826 Helix-hairpin-helix motif CJO83_RS09955 PF01653 NAD-dependent DNA ligase adenylation domain CJO83_RS09955 PF03120 NAD-dependent DNA ligase OB-fold domain CJO83_RS09965 PF02463 RecF/RecN/SMC N terminal domain CJO83_RS09965 PF06470 SMC proteins Flexible Hinge Domain CJO83_RS09970 PF00561 alpha/beta hydrolase fold CJO83_RS09980 PF00155 Aminotransferase class I and II CJO83_RS09985 PF14602 Hexapeptide repeat of succinyl-transferase CJO83_RS09985 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJO83_RS09985 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS09995 PF03960 ArsC family CJO83_RS10000 PF07687 Peptidase dimerisation domain CJO83_RS10000 PF01546 Peptidase family M20/M25/M40 CJO83_RS10010 PF05175 Methyltransferase small domain CJO83_RS10015 PF01227 GTP cyclohydrolase I CJO83_RS10035 PF03576 Peptidase family S58 CJO83_RS10040 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO83_RS10040 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10045 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO83_RS10055 PF00005 ABC transporter CJO83_RS10055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO83_RS10060 PF01112 Asparaginase CJO83_RS10070 PF12848 ABC transporter CJO83_RS10070 PF00005 ABC transporter CJO83_RS10075 PF02515 CoA-transferase family III CJO83_RS10080 PF04463 Protein of unknown function (DUF523) CJO83_RS10085 PF02600 Disulfide bond formation protein DsbB CJO83_RS10090 PF18073 Rubredoxin metal binding domain CJO83_RS10095 PF00842 Alanine racemase, C-terminal domain CJO83_RS10095 PF01168 Alanine racemase, N-terminal domain CJO83_RS10100 PF07690 Major Facilitator Superfamily CJO83_RS10105 PF03167 Uracil DNA glycosylase superfamily CJO83_RS10110 PF00583 Acetyltransferase (GNAT) family CJO83_RS10115 PF00814 Glycoprotease family CJO83_RS10125 PF07690 Major Facilitator Superfamily CJO83_RS10135 PF01274 Malate synthase CJO83_RS10150 PF03466 LysR substrate binding domain CJO83_RS10150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS10160 PF00463 Isocitrate lyase family CJO83_RS10180 PF03737 Aldolase/RraA CJO83_RS10190 PF04397 LytTr DNA-binding domain CJO83_RS10190 PF00072 Response regulator receiver domain CJO83_RS10195 PF06580 Histidine kinase CJO83_RS10195 PF07694 5TMR of 5TMR-LYT CJO83_RS10220 PF03466 LysR substrate binding domain CJO83_RS10220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS10225 PF12857 TOBE-like domain CJO83_RS10225 PF17850 CysA C-terminal regulatory domain CJO83_RS10225 PF00005 ABC transporter CJO83_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10235 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10250 PF03459 TOBE domain CJO83_RS10250 PF00005 ABC transporter CJO83_RS10255 PF00005 ABC transporter CJO83_RS10260 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10265 PF00296 Luciferase-like monooxygenase CJO83_RS10270 PF09084 NMT1/THI5 like CJO83_RS10275 PF03358 NADPH-dependent FMN reductase CJO83_RS10285 PF06826 Predicted Permease Membrane Region CJO83_RS10290 PF00390 Malic enzyme, N-terminal domain CJO83_RS10290 PF03949 Malic enzyme, NAD binding domain CJO83_RS10295 PF01070 FMN-dependent dehydrogenase CJO83_RS10300 PF00158 Sigma-54 interaction domain CJO83_RS10300 PF00072 Response regulator receiver domain CJO83_RS10300 PF02954 Bacterial regulatory protein, Fis family CJO83_RS10305 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS10315 PF02910 Fumarate reductase flavoprotein C-term CJO83_RS10315 PF00890 FAD binding domain CJO83_RS10320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJO83_RS10320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJO83_RS10320 PF10531 SLBB domain CJO83_RS10325 PF10431 C-terminal, D2-small domain, of ClpB protein CJO83_RS10325 PF17871 AAA lid domain CJO83_RS10325 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS10325 PF07724 AAA domain (Cdc48 subfamily) CJO83_RS10325 PF02861 Clp amino terminal domain, pathogenicity island component CJO83_RS10330 PF10605 3HB-oligomer hydrolase (3HBOH) CJO83_RS10335 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJO83_RS10340 PF02391 MoaE protein CJO83_RS10345 PF02597 ThiS family CJO83_RS10350 PF03453 MoeA N-terminal region (domain I and II) CJO83_RS10350 PF03454 MoeA C-terminal region (domain IV) CJO83_RS10350 PF00994 Probable molybdopterin binding domain CJO83_RS10355 PF03167 Uracil DNA glycosylase superfamily CJO83_RS10360 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS10360 PF14821 Threonine synthase N terminus CJO83_RS10365 PF01842 ACT domain CJO83_RS10365 PF00742 Homoserine dehydrogenase CJO83_RS10365 PF03447 Homoserine dehydrogenase, NAD binding domain CJO83_RS10370 PF00155 Aminotransferase class I and II CJO83_RS10380 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJO83_RS10390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJO83_RS10395 PF00535 Glycosyl transferase family 2 CJO83_RS10400 PF00551 Formyl transferase CJO83_RS10400 PF02911 Formyl transferase, C-terminal domain CJO83_RS10400 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS10405 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS10405 PF02911 Formyl transferase, C-terminal domain CJO83_RS10405 PF00551 Formyl transferase CJO83_RS10410 PF01522 Polysaccharide deacetylase CJO83_RS10415 PF00578 AhpC/TSA family CJO83_RS10420 PF02562 PhoH-like protein CJO83_RS10420 PF13638 PIN domain CJO83_RS10430 PF00877 NlpC/P60 family CJO83_RS10435 PF01384 Phosphate transporter family CJO83_RS10445 PF03796 DnaB-like helicase C terminal domain CJO83_RS10445 PF00772 DnaB-like helicase N terminal domain CJO83_RS10450 PF01281 Ribosomal protein L9, N-terminal domain CJO83_RS10450 PF03948 Ribosomal protein L9, C-terminal domain CJO83_RS10455 PF01084 Ribosomal protein S18 CJO83_RS10465 PF01250 Ribosomal protein S6 CJO83_RS10470 PF00710 Asparaginase, N-terminal CJO83_RS10470 PF17763 Glutaminase/Asparaginase C-terminal domain CJO83_RS10475 PF00175 Oxidoreductase NAD-binding domain CJO83_RS10475 PF00970 Oxidoreductase FAD-binding domain CJO83_RS10480 PF01726 LexA DNA binding domain CJO83_RS10480 PF00717 Peptidase S24-like CJO83_RS10495 PF07687 Peptidase dimerisation domain CJO83_RS10495 PF01546 Peptidase family M20/M25/M40 CJO83_RS10515 PF01207 Dihydrouridine synthase (Dus) CJO83_RS10520 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS10530 PF03144 Elongation factor Tu domain 2 CJO83_RS10530 PF00009 Elongation factor Tu GTP binding domain CJO83_RS10530 PF00679 Elongation factor G C-terminus CJO83_RS10535 PF01047 MarR family CJO83_RS10540 PF02321 Outer membrane efflux protein CJO83_RS10545 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS10545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS10550 PF07690 Major Facilitator Superfamily CJO83_RS10555 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJO83_RS10555 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJO83_RS10555 PF09157 Pseudouridine synthase II TruB, C-terminal CJO83_RS10560 PF02033 Ribosome-binding factor A CJO83_RS10565 PF00009 Elongation factor Tu GTP binding domain CJO83_RS10565 PF08364 Bacterial translation initiation factor IF-2 associated region CJO83_RS10565 PF04760 Translation initiation factor IF-2, N-terminal region CJO83_RS10565 PF11987 Translation-initiation factor 2 CJO83_RS10570 PF08529 NusA N-terminal domain CJO83_RS10570 PF13184 NusA-like KH domain CJO83_RS10575 PF17384 RimP C-terminal SH3 domain CJO83_RS10575 PF02576 RimP N-terminal domain CJO83_RS10580 PF01479 S4 domain CJO83_RS10580 PF00849 RNA pseudouridylate synthase CJO83_RS10585 PF04079 Segregation and condensation complex subunit ScpB CJO83_RS10595 PF00027 Cyclic nucleotide-binding domain CJO83_RS10595 PF13545 Crp-like helix-turn-helix domain CJO83_RS10610 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CJO83_RS10610 PF12801 4Fe-4S binding domain CJO83_RS10610 PF13746 4Fe-4S dicluster domain CJO83_RS10615 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CJO83_RS10615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO83_RS10630 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS10640 PF00403 Heavy-metal-associated domain CJO83_RS10650 PF03969 AFG1-like ATPase CJO83_RS10655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO83_RS10655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS10660 PF02817 e3 binding domain CJO83_RS10660 PF00364 Biotin-requiring enzyme CJO83_RS10660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJO83_RS10665 PF16078 2-oxoglutarate dehydrogenase N-terminus CJO83_RS10665 PF16870 2-oxoglutarate dehydrogenase C-terminal CJO83_RS10665 PF02779 Transketolase, pyrimidine binding domain CJO83_RS10665 PF00676 Dehydrogenase E1 component CJO83_RS10670 PF03009 Glycerophosphoryl diester phosphodiesterase family CJO83_RS10675 PF17912 MalK OB fold domain CJO83_RS10675 PF00005 ABC transporter CJO83_RS10680 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10685 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS10690 PF13416 Bacterial extracellular solute-binding protein CJO83_RS10705 PF00072 Response regulator receiver domain CJO83_RS10705 PF02954 Bacterial regulatory protein, Fis family CJO83_RS10705 PF00158 Sigma-54 interaction domain CJO83_RS10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS10710 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS10710 PF00989 PAS fold CJO83_RS10720 PF03951 Glutamine synthetase, beta-Grasp domain CJO83_RS10720 PF00120 Glutamine synthetase, catalytic domain CJO83_RS10730 PF02464 Competence-damaged protein CJO83_RS10730 PF18146 Damage-inducible protein CinA KH domain CJO83_RS10730 PF00994 Probable molybdopterin binding domain CJO83_RS10755 PF04408 Helicase associated domain (HA2) CJO83_RS10755 PF00270 DEAD/DEAH box helicase CJO83_RS10755 PF00271 Helicase conserved C-terminal domain CJO83_RS10755 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CJO83_RS10755 PF11898 Domain of unknown function (DUF3418) CJO83_RS10760 PF00583 Acetyltransferase (GNAT) family CJO83_RS10760 PF00696 Amino acid kinase family CJO83_RS10765 PF01418 Helix-turn-helix domain, rpiR family CJO83_RS10765 PF01380 SIS domain CJO83_RS10770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO83_RS10770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO83_RS10780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO83_RS10780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO83_RS10790 PF01261 Xylose isomerase-like TIM barrel CJO83_RS10795 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS10800 PF00005 ABC transporter CJO83_RS10805 PF13407 Periplasmic binding protein domain CJO83_RS10810 PF00294 pfkB family carbohydrate kinase CJO83_RS10815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJO83_RS10815 PF00205 Thiamine pyrophosphate enzyme, central domain CJO83_RS10815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJO83_RS10820 PF01261 Xylose isomerase-like TIM barrel CJO83_RS10825 PF04962 KduI/IolB family CJO83_RS10830 PF00267 Gram-negative porin CJO83_RS10835 PF04362 Bacterial Fe(2+) trafficking CJO83_RS10840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS10840 PF00672 HAMP domain CJO83_RS10845 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CJO83_RS10850 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJO83_RS10855 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJO83_RS10860 PF02146 Sir2 family CJO83_RS10865 PF00588 SpoU rRNA Methylase family CJO83_RS10865 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJO83_RS10870 PF08206 Ribonuclease B OB domain CJO83_RS10870 PF00773 RNB domain CJO83_RS10870 PF00575 S1 RNA binding domain CJO83_RS10870 PF08461 Ribonuclease R winged-helix domain CJO83_RS10870 PF17876 Cold shock domain CJO83_RS10880 PF00156 Phosphoribosyl transferase domain CJO83_RS10885 PF00709 Adenylosuccinate synthetase CJO83_RS10890 PF13393 Histidyl-tRNA synthetase CJO83_RS10900 PF01145 SPFH domain / Band 7 family CJO83_RS10905 PF12221 Bacterial membrane protein N terminal CJO83_RS10905 PF01145 SPFH domain / Band 7 family CJO83_RS10910 PF01926 50S ribosome-binding GTPase CJO83_RS10910 PF13167 GTP-binding GTPase N-terminal CJO83_RS10910 PF16360 GTP-binding GTPase Middle Region CJO83_RS10915 PF17209 Hfq protein CJO83_RS10920 PF01926 50S ribosome-binding GTPase CJO83_RS10920 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJO83_RS10925 PF13360 PQQ-like domain CJO83_RS10930 PF09976 Tetratricopeptide repeat-like domain CJO83_RS10935 PF03129 Anticodon binding domain CJO83_RS10935 PF13393 Histidyl-tRNA synthetase CJO83_RS10940 PF04551 GcpE protein CJO83_RS10955 PF04055 Radical SAM superfamily CJO83_RS10960 PF00334 Nucleoside diphosphate kinase CJO83_RS10965 PF01027 Inhibitor of apoptosis-promoting Bax1 CJO83_RS10970 PF05958 tRNA (Uracil-5-)-methyltransferase CJO83_RS10970 PF01938 TRAM domain CJO83_RS10980 PF04542 Sigma-70 region 2 CJO83_RS10980 PF00140 Sigma-70 factor, region 1.2 CJO83_RS10980 PF04539 Sigma-70 region 3 CJO83_RS10980 PF04545 Sigma-70, region 4 CJO83_RS10985 PF01476 LysM domain CJO83_RS10985 PF01551 Peptidase family M23 CJO83_RS10995 PF01975 Survival protein SurE CJO83_RS11000 PF08659 KR domain CJO83_RS11000 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS11000 PF00107 Zinc-binding dehydrogenase CJO83_RS11000 PF00698 Acyl transferase domain CJO83_RS11000 PF00550 Phosphopantetheine attachment site CJO83_RS11000 PF14765 Polyketide synthase dehydratase CJO83_RS11000 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS11000 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS11000 PF16197 Ketoacyl-synthetase C-terminal extension CJO83_RS11005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO83_RS11010 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS11010 PF16925 Tetracyclin repressor-like, C-terminal domain CJO83_RS11015 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS11020 PF00005 ABC transporter CJO83_RS11030 PF02515 CoA-transferase family III CJO83_RS11045 PF13662 Toprim domain CJO83_RS11045 PF02132 RecR protein CJO83_RS11050 PF02575 YbaB/EbfC DNA-binding family CJO83_RS11055 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJO83_RS11055 PF12170 DNA polymerase III tau subunit V interacting with alpha CJO83_RS11055 PF12169 DNA polymerase III subunits gamma and tau domain III CJO83_RS11065 PF12705 PD-(D/E)XK nuclease superfamily CJO83_RS11065 PF00580 UvrD/REP helicase N-terminal domain CJO83_RS11065 PF13361 UvrD-like helicase C-terminal domain CJO83_RS11075 PF00085 Thioredoxin CJO83_RS11080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO83_RS11080 PF07498 Rho termination factor, N-terminal domain CJO83_RS11080 PF07497 Rho termination factor, RNA-binding domain CJO83_RS11085 PF00072 Response regulator receiver domain CJO83_RS11085 PF00158 Sigma-54 interaction domain CJO83_RS11085 PF02954 Bacterial regulatory protein, Fis family CJO83_RS11090 PF00072 Response regulator receiver domain CJO83_RS11090 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS11095 PF06167 Glucose-regulated metallo-peptidase M90 CJO83_RS11105 PF01197 Ribosomal protein L31 CJO83_RS11115 PF01554 MatE CJO83_RS11150 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO83_RS11155 PF01734 Patatin-like phospholipase CJO83_RS11160 PF00877 NlpC/P60 family CJO83_RS11165 PF00005 ABC transporter CJO83_RS11165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJO83_RS11170 PF12911 N-terminal TM domain of oligopeptide transport permease C CJO83_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS11175 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS11180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO83_RS11195 PF01842 ACT domain CJO83_RS11195 PF00696 Amino acid kinase family CJO83_RS11195 PF13840 ACT domain CJO83_RS11200 PF01171 PP-loop family CJO83_RS11200 PF09179 TilS substrate binding domain CJO83_RS11200 PF11734 TilS substrate C-terminal domain CJO83_RS11205 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJO83_RS11210 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO83_RS11215 PF01406 tRNA synthetases class I (C) catalytic domain CJO83_RS11215 PF09190 DALR domain CJO83_RS11225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO83_RS11230 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJO83_RS11235 PF00149 Calcineurin-like phosphoesterase CJO83_RS11240 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS11245 PF00588 SpoU rRNA Methylase family CJO83_RS11250 PF00459 Inositol monophosphatase family CJO83_RS11255 PF01381 Helix-turn-helix CJO83_RS11255 PF08671 Anti-repressor SinI CJO83_RS11260 PF00117 Glutamine amidotransferase class-I CJO83_RS11265 PF03473 MOSC domain CJO83_RS11265 PF03475 3-alpha domain CJO83_RS11270 PF02203 Tar ligand binding domain homologue CJO83_RS11270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS11270 PF00672 HAMP domain CJO83_RS11275 PF00672 HAMP domain CJO83_RS11275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS11275 PF17200 Single Cache domain 2 CJO83_RS11280 PF00248 Aldo/keto reductase family CJO83_RS11285 PF07690 Major Facilitator Superfamily CJO83_RS11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS11290 PF03466 LysR substrate binding domain CJO83_RS11295 PF05188 MutS domain II CJO83_RS11295 PF00488 MutS domain V CJO83_RS11295 PF05190 MutS family domain IV CJO83_RS11295 PF05192 MutS domain III CJO83_RS11295 PF01624 MutS domain I CJO83_RS11305 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO83_RS11310 PF08007 Cupin superfamily protein CJO83_RS11315 PF03099 Biotin/lipoate A/B protein ligase family CJO83_RS11315 PF12706 Beta-lactamase superfamily domain CJO83_RS11320 PF06804 NlpB/DapX lipoprotein CJO83_RS11325 PF00701 Dihydrodipicolinate synthetase family CJO83_RS11335 PF00579 tRNA synthetases class I (W and Y) CJO83_RS11340 PF02163 Peptidase family M50 CJO83_RS11345 PF01300 Telomere recombination CJO83_RS11350 PF02811 PHP domain CJO83_RS11355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS11370 PF04134 Protein of unknown function, DUF393 CJO83_RS11375 PF00561 alpha/beta hydrolase fold CJO83_RS11380 PF04305 Protein of unknown function (DUF455) CJO83_RS11385 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS11390 PF01430 Hsp33 protein CJO83_RS11400 PF04977 Septum formation initiator CJO83_RS11405 PF03952 Enolase, N-terminal domain CJO83_RS11405 PF00113 Enolase, C-terminal TIM barrel domain CJO83_RS11415 PF00793 DAHP synthetase I family CJO83_RS11420 PF06418 CTP synthase N-terminus CJO83_RS11420 PF00117 Glutamine amidotransferase class-I CJO83_RS11435 PF08379 Bacterial transglutaminase-like N-terminal region CJO83_RS11435 PF01841 Transglutaminase-like superfamily CJO83_RS11445 PF14403 Circularly permuted ATP-grasp type 2 CJO83_RS11450 PF00753 Metallo-beta-lactamase superfamily CJO83_RS11450 PF03772 Competence protein CJO83_RS11455 PF01026 TatD related DNase CJO83_RS11460 PF00005 ABC transporter CJO83_RS11465 PF12704 MacB-like periplasmic core domain CJO83_RS11465 PF02687 FtsX-like permease family CJO83_RS11475 PF17768 RecJ OB domain CJO83_RS11475 PF02272 DHHA1 domain CJO83_RS11475 PF01368 DHH family CJO83_RS11480 PF00037 4Fe-4S binding domain CJO83_RS11480 PF11953 Domain of unknown function (DUF3470) CJO83_RS11505 PF03601 Conserved hypothetical protein 698 CJO83_RS11510 PF03466 LysR substrate binding domain CJO83_RS11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS11535 PF00551 Formyl transferase CJO83_RS11555 PF04267 Sarcosine oxidase, delta subunit family CJO83_RS11560 PF01266 FAD dependent oxidoreductase CJO83_RS11570 PF01965 DJ-1/PfpI family CJO83_RS11570 PF12833 Helix-turn-helix domain CJO83_RS11575 PF01381 Helix-turn-helix CJO83_RS11580 PF00155 Aminotransferase class I and II CJO83_RS11590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS11590 PF03466 LysR substrate binding domain CJO83_RS11595 PF07690 Major Facilitator Superfamily CJO83_RS11600 PF03466 LysR substrate binding domain CJO83_RS11600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS11605 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS11605 PF00175 Oxidoreductase NAD-binding domain CJO83_RS11605 PF00970 Oxidoreductase FAD-binding domain CJO83_RS11610 PF00355 Rieske [2Fe-2S] domain CJO83_RS11610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJO83_RS11615 PF13577 SnoaL-like domain CJO83_RS11620 PF00355 Rieske [2Fe-2S] domain CJO83_RS11625 PF07883 Cupin domain CJO83_RS11630 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO83_RS11635 PF02798 Glutathione S-transferase, N-terminal domain CJO83_RS11635 PF14497 Glutathione S-transferase, C-terminal domain CJO83_RS11640 PF13609 Gram-negative porin CJO83_RS11650 PF13609 Gram-negative porin CJO83_RS11655 PF01055 Glycosyl hydrolases family 31 CJO83_RS11655 PF13802 Galactose mutarotase-like CJO83_RS11655 PF17137 Domain of unknown function (DUF5110) CJO83_RS11655 PF16338 Domain of unknown function (DUF4968) CJO83_RS11660 PF07690 Major Facilitator Superfamily CJO83_RS11665 PF13378 Enolase C-terminal domain-like CJO83_RS11665 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO83_RS11670 PF07729 FCD domain CJO83_RS11670 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS11675 PF01609 Transposase DDE domain CJO83_RS11675 PF13006 Insertion element 4 transposase N-terminal CJO83_RS11685 PF00072 Response regulator receiver domain CJO83_RS11685 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS11695 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS11695 PF16736 Single Cache-like CJO83_RS11695 PF00989 PAS fold CJO83_RS11705 PF00072 Response regulator receiver domain CJO83_RS11705 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS11725 PF01066 CDP-alcohol phosphatidyltransferase CJO83_RS11730 PF02151 UvrB/uvrC motif CJO83_RS11730 PF01541 GIY-YIG catalytic domain CJO83_RS11730 PF08459 UvrC Helix-hairpin-helix N-terminal CJO83_RS11740 PF09285 Elongation factor P, C-terminal CJO83_RS11740 PF01132 Elongation factor P (EF-P) OB domain CJO83_RS11740 PF08207 Elongation factor P (EF-P) KOW-like domain CJO83_RS11745 PF00933 Glycosyl hydrolase family 3 N terminal domain CJO83_RS11750 PF01648 4'-phosphopantetheinyl transferase superfamily CJO83_RS11755 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJO83_RS11760 PF02565 Recombination protein O C terminal CJO83_RS11760 PF11967 Recombination protein O N terminal CJO83_RS11765 PF01926 50S ribosome-binding GTPase CJO83_RS11765 PF07650 KH domain CJO83_RS11770 PF14622 Ribonuclease-III-like CJO83_RS11770 PF00035 Double-stranded RNA binding motif CJO83_RS11780 PF10502 Signal peptidase, peptidase S26 CJO83_RS11785 PF00009 Elongation factor Tu GTP binding domain CJO83_RS11785 PF00679 Elongation factor G C-terminus CJO83_RS11785 PF03144 Elongation factor Tu domain 2 CJO83_RS11785 PF06421 GTP-binding protein LepA C-terminus CJO83_RS11795 PF13180 PDZ domain CJO83_RS11795 PF17820 PDZ domain CJO83_RS11810 PF08281 Sigma-70, region 4 CJO83_RS11810 PF04542 Sigma-70 region 2 CJO83_RS11820 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS11820 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS11825 PF00550 Phosphopantetheine attachment site CJO83_RS11835 PF00698 Acyl transferase domain CJO83_RS11840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJO83_RS11840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO83_RS11845 PF02504 Fatty acid synthesis protein CJO83_RS11850 PF01783 Ribosomal L32p protein family CJO83_RS11855 PF02620 Large ribosomal RNA subunit accumulation protein YceD CJO83_RS11860 PF02545 Maf-like protein CJO83_RS11865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJO83_RS11870 PF01343 Peptidase family S49 CJO83_RS11870 PF06965 Na+/H+ antiporter 1 CJO83_RS11880 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS11885 PF01479 S4 domain CJO83_RS11885 PF00849 RNA pseudouridylate synthase CJO83_RS11890 PF12111 Polyribonucleotide phosphorylase C terminal CJO83_RS11890 PF00575 S1 RNA binding domain CJO83_RS11890 PF10150 Ribonuclease E/G family CJO83_RS11895 PF06463 Molybdenum Cofactor Synthesis C CJO83_RS11895 PF04055 Radical SAM superfamily CJO83_RS11900 PF12804 MobA-like NTP transferase domain CJO83_RS11905 PF00994 Probable molybdopterin binding domain CJO83_RS11905 PF03454 MoeA C-terminal region (domain IV) CJO83_RS11905 PF03453 MoeA N-terminal region (domain I and II) CJO83_RS11915 PF02646 RmuC family CJO83_RS11930 PF02589 LUD domain CJO83_RS11935 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CJO83_RS11935 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CJO83_RS11945 PF00106 short chain dehydrogenase CJO83_RS11950 PF00152 tRNA synthetases class II (D, K and N) CJO83_RS11950 PF01336 OB-fold nucleic acid binding domain CJO83_RS11960 PF13006 Insertion element 4 transposase N-terminal CJO83_RS11960 PF01609 Transposase DDE domain CJO83_RS11965 PF04384 Iron-sulphur cluster assembly CJO83_RS11970 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS11975 PF00012 Hsp70 protein CJO83_RS11980 PF07743 HSCB C-terminal oligomerisation domain CJO83_RS11980 PF00226 DnaJ domain CJO83_RS11990 PF01521 Iron-sulphur cluster biosynthesis CJO83_RS11995 PF01592 NifU-like N terminal domain CJO83_RS12000 PF00266 Aminotransferase class-V CJO83_RS12005 PF02082 Transcriptional regulator CJO83_RS12010 PF13407 Periplasmic binding protein domain CJO83_RS12015 PF00005 ABC transporter CJO83_RS12020 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS12025 PF00356 Bacterial regulatory proteins, lacI family CJO83_RS12030 PF00294 pfkB family carbohydrate kinase CJO83_RS12040 PF00271 Helicase conserved C-terminal domain CJO83_RS12040 PF12344 Ultra-violet resistance protein B CJO83_RS12040 PF04851 Type III restriction enzyme, res subunit CJO83_RS12040 PF02151 UvrB/uvrC motif CJO83_RS12040 PF17757 UvrB interaction domain CJO83_RS12045 PF00155 Aminotransferase class I and II CJO83_RS12055 PF17938 Tetracyclin repressor-like, C-terminal domain CJO83_RS12055 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS12060 PF04060 Putative Fe-S cluster CJO83_RS12065 PF10576 Iron-sulfur binding domain of endonuclease III CJO83_RS12065 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO83_RS12065 PF00633 Helix-hairpin-helix motif CJO83_RS12070 PF00881 Nitroreductase family CJO83_RS12075 PF05598 Transposase domain (DUF772) CJO83_RS12075 PF01609 Transposase DDE domain CJO83_RS12095 PF01609 Transposase DDE domain CJO83_RS12095 PF13006 Insertion element 4 transposase N-terminal CJO83_RS12100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO83_RS12105 PF00034 Cytochrome c CJO83_RS12110 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS12110 PF01434 Peptidase family M41 CJO83_RS12110 PF17862 AAA+ lid domain CJO83_RS12150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS12150 PF00183 Hsp90 protein CJO83_RS12155 PF00155 Aminotransferase class I and II CJO83_RS12160 PF02272 DHHA1 domain CJO83_RS12160 PF01411 tRNA synthetases class II (A) CJO83_RS12160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO83_RS12165 PF00892 EamA-like transporter family CJO83_RS12175 PF00155 Aminotransferase class I and II CJO83_RS12180 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS12180 PF13417 Glutathione S-transferase, N-terminal domain CJO83_RS12195 PF02652 L-lactate permease CJO83_RS12210 PF00521 DNA gyrase/topoisomerase IV, subunit A CJO83_RS12215 PF01464 Transglycosylase SLT domain CJO83_RS12220 PF01751 Toprim domain CJO83_RS12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS12220 PF00204 DNA gyrase B CJO83_RS12220 PF00986 DNA gyrase B subunit, carboxyl terminus CJO83_RS12225 PF16326 ABC transporter C-terminal domain CJO83_RS12225 PF12848 ABC transporter CJO83_RS12225 PF00005 ABC transporter CJO83_RS12235 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS12265 PF00270 DEAD/DEAH box helicase CJO83_RS12265 PF00271 Helicase conserved C-terminal domain CJO83_RS12270 PF03781 Sulfatase-modifying factor enzyme 1 CJO83_RS12270 PF12867 DinB superfamily CJO83_RS12275 PF10017 Histidine-specific methyltransferase, SAM-dependent CJO83_RS12280 PF03741 Integral membrane protein TerC family CJO83_RS12285 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS12290 PF00303 Thymidylate synthase CJO83_RS12295 PF00186 Dihydrofolate reductase CJO83_RS12300 PF01523 Putative modulator of DNA gyrase CJO83_RS12305 PF04751 Protein of unknown function (DUF615) CJO83_RS12310 PF00994 Probable molybdopterin binding domain CJO83_RS12315 PF00929 Exonuclease CJO83_RS12320 PF01435 Peptidase family M48 CJO83_RS12325 PF03193 RsgA GTPase CJO83_RS12335 PF17113 Regulatory signalling modulator protein AmpE CJO83_RS12335 PF03186 CobD/Cbib protein CJO83_RS12340 PF00293 NUDIX domain CJO83_RS12345 PF01245 Ribosomal protein L19 CJO83_RS12350 PF01746 tRNA (Guanine-1)-methyltransferase CJO83_RS12355 PF01782 RimM N-terminal domain CJO83_RS12355 PF05239 PRC-barrel domain CJO83_RS12360 PF00886 Ribosomal protein S16 CJO83_RS12365 PF07995 Glucose / Sorbosone dehydrogenase CJO83_RS12385 PF04055 Radical SAM superfamily CJO83_RS12390 PF01037 Lrp/AsnC ligand binding domain CJO83_RS12395 PF01266 FAD dependent oxidoreductase CJO83_RS12400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS12400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS12400 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO83_RS12400 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS12405 PF01012 Electron transfer flavoprotein domain CJO83_RS12405 PF00766 Electron transfer flavoprotein FAD-binding domain CJO83_RS12410 PF01012 Electron transfer flavoprotein domain CJO83_RS12415 PF03180 NLPA lipoprotein CJO83_RS12420 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS12425 PF00005 ABC transporter CJO83_RS12425 PF09383 NIL domain CJO83_RS12430 PF00850 Histone deacetylase domain CJO83_RS12435 PF13406 Transglycosylase SLT domain CJO83_RS12440 PF01609 Transposase DDE domain CJO83_RS12440 PF13006 Insertion element 4 transposase N-terminal CJO83_RS12445 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS12455 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS12460 PF00294 pfkB family carbohydrate kinase CJO83_RS12465 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO83_RS12465 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO83_RS12465 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO83_RS12470 PF18073 Rubredoxin metal binding domain CJO83_RS12480 PF00216 Bacterial DNA-binding protein CJO83_RS12485 PF00575 S1 RNA binding domain CJO83_RS12490 PF02224 Cytidylate kinase CJO83_RS12495 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJO83_RS12500 PF02153 Prephenate dehydrogenase CJO83_RS12500 PF01842 ACT domain CJO83_RS12505 PF00155 Aminotransferase class I and II CJO83_RS12510 PF00800 Prephenate dehydratase CJO83_RS12510 PF01842 ACT domain CJO83_RS12510 PF01817 Chorismate mutase type II CJO83_RS12515 PF00266 Aminotransferase class-V CJO83_RS12525 PF03989 DNA gyrase C-terminal domain, beta-propeller CJO83_RS12525 PF00521 DNA gyrase/topoisomerase IV, subunit A CJO83_RS12530 PF00691 OmpA family CJO83_RS12545 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS12565 PF02796 Helix-turn-helix domain of resolvase CJO83_RS12565 PF00239 Resolvase, N terminal domain CJO83_RS12585 PF08479 POTRA domain, ShlB-type CJO83_RS12585 PF17287 POTRA domain CJO83_RS12585 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO83_RS12595 PF05594 Haemagluttinin repeat CJO83_RS12595 PF13018 Extended Signal Peptide of Type V secretion system CJO83_RS12595 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain CJO83_RS12595 PF05860 haemagglutination activity domain CJO83_RS12595 PF13332 Hemagglutinin repeat CJO83_RS12600 PF05598 Transposase domain (DUF772) CJO83_RS12600 PF01609 Transposase DDE domain CJO83_RS12680 PF05598 Transposase domain (DUF772) CJO83_RS12680 PF01609 Transposase DDE domain CJO83_RS12795 PF01555 DNA methylase CJO83_RS12795 PF18755 Restriction Enzyme Adenine Methylase Associated CJO83_RS12800 PF01555 DNA methylase CJO83_RS12850 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS12855 PF00106 short chain dehydrogenase CJO83_RS12860 PF00107 Zinc-binding dehydrogenase CJO83_RS12860 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS12875 PF03421 YopJ Serine/Threonine acetyltransferase CJO83_RS12895 PF00881 Nitroreductase family CJO83_RS12910 PF03330 Lytic transglycolase CJO83_RS12920 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS12920 PF02798 Glutathione S-transferase, N-terminal domain CJO83_RS12940 PF01810 LysE type translocator CJO83_RS12955 PF01206 Sulfurtransferase TusA CJO83_RS12960 PF13344 Haloacid dehalogenase-like hydrolase CJO83_RS12960 PF00293 NUDIX domain CJO83_RS12965 PF01212 Beta-eliminating lyase CJO83_RS12970 PF01361 Tautomerase enzyme CJO83_RS12975 PF00596 Class II Aldolase and Adducin N-terminal domain CJO83_RS12980 PF06779 Uncharacterised MFS-type transporter YbfB CJO83_RS12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS12985 PF03466 LysR substrate binding domain CJO83_RS12995 PF01145 SPFH domain / Band 7 family CJO83_RS13005 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS13005 PF00593 TonB dependent receptor CJO83_RS13020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJO83_RS13020 PF02272 DHHA1 domain CJO83_RS13020 PF01411 tRNA synthetases class II (A) CJO83_RS13025 PF02515 CoA-transferase family III CJO83_RS13035 PF07331 Tripartite tricarboxylate transporter TctB family CJO83_RS13040 PF01970 Tripartite tricarboxylate transporter TctA family CJO83_RS13050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CJO83_RS13050 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJO83_RS13080 PF07152 YaeQ protein CJO83_RS13085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJO83_RS13095 PF04752 ChaC-like protein CJO83_RS13105 PF00501 AMP-binding enzyme CJO83_RS13105 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS13110 PF00085 Thioredoxin CJO83_RS13120 PF01814 Hemerythrin HHE cation binding domain CJO83_RS13125 PF00141 Peroxidase CJO83_RS13130 PF00899 ThiF family CJO83_RS13135 PF05170 AsmA family CJO83_RS13140 PF00034 Cytochrome c CJO83_RS13140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO83_RS13145 PF05199 GMC oxidoreductase CJO83_RS13145 PF00732 GMC oxidoreductase CJO83_RS13155 PF00933 Glycosyl hydrolase family 3 N terminal domain CJO83_RS13160 PF01243 Pyridoxamine 5'-phosphate oxidase CJO83_RS13160 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJO83_RS13175 PF01625 Peptide methionine sulfoxide reductase CJO83_RS13180 PF01613 Flavin reductase like domain CJO83_RS13190 PF01037 Lrp/AsnC ligand binding domain CJO83_RS13195 PF04199 Putative cyclase CJO83_RS13200 PF00266 Aminotransferase class-V CJO83_RS13205 PF03301 Tryptophan 2,3-dioxygenase CJO83_RS13215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS13215 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS13215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS13220 PF00860 Permease family CJO83_RS13225 PF00578 AhpC/TSA family CJO83_RS13225 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJO83_RS13230 PF05957 Bacterial protein of unknown function (DUF883) CJO83_RS13250 PF00005 ABC transporter CJO83_RS13255 PF03649 Uncharacterised protein family (UPF0014) CJO83_RS13280 PF00793 DAHP synthetase I family CJO83_RS13285 PF04344 Chemotaxis phosphatase, CheZ CJO83_RS13290 PF00072 Response regulator receiver domain CJO83_RS13300 PF01609 Transposase DDE domain CJO83_RS13300 PF13006 Insertion element 4 transposase N-terminal CJO83_RS13310 PF04143 Sulphur transport CJO83_RS13315 PF06508 Queuosine biosynthesis protein QueC CJO83_RS13325 PF00691 OmpA family CJO83_RS13330 PF07676 WD40-like Beta Propeller Repeat CJO83_RS13330 PF04052 TolB amino-terminal domain CJO83_RS13340 PF02472 Biopolymer transport protein ExbD/TolR CJO83_RS13345 PF01618 MotA/TolQ/ExbB proton channel family CJO83_RS13350 PF03061 Thioesterase superfamily CJO83_RS13355 PF00106 short chain dehydrogenase CJO83_RS13360 PF00464 Serine hydroxymethyltransferase CJO83_RS13365 PF03477 ATP cone domain CJO83_RS13385 PF05567 Neisseria PilC beta-propeller domain CJO83_RS13415 PF05567 Neisseria PilC beta-propeller domain CJO83_RS13430 PF01872 RibD C-terminal domain CJO83_RS13430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJO83_RS13435 PF00677 Lumazine binding domain CJO83_RS13440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJO83_RS13440 PF00925 GTP cyclohydrolase II CJO83_RS13445 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJO83_RS13450 PF01029 NusB family CJO83_RS13455 PF00155 Aminotransferase class I and II CJO83_RS13460 PF01464 Transglycosylase SLT domain CJO83_RS13460 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJO83_RS13465 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJO83_RS13495 PF02390 Putative methyltransferase CJO83_RS13500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO83_RS13505 PF02673 Bacitracin resistance protein BacA CJO83_RS13515 PF03692 Putative zinc- or iron-chelating domain CJO83_RS13525 PF08361 MAATS-type transcriptional repressor, C-terminal region CJO83_RS13525 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS13535 PF01206 Sulfurtransferase TusA CJO83_RS13535 PF00581 Rhodanese-like domain CJO83_RS13550 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJO83_RS13550 PF00534 Glycosyl transferases group 1 CJO83_RS13555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJO83_RS13560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJO83_RS13560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJO83_RS13560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJO83_RS13560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJO83_RS13570 PF00953 Glycosyl transferase family 4 CJO83_RS13570 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJO83_RS13590 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJO83_RS13595 PF00483 Nucleotidyl transferase CJO83_RS13600 PF04321 RmlD substrate binding domain CJO83_RS13605 PF16363 GDP-mannose 4,6 dehydratase CJO83_RS13610 PF00149 Calcineurin-like phosphoesterase CJO83_RS13615 PF01553 Acyltransferase CJO83_RS13620 PF01979 Amidohydrolase family CJO83_RS13625 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJO83_RS13625 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJO83_RS13630 PF00156 Phosphoribosyl transferase domain CJO83_RS13635 PF03652 Holliday junction resolvase CJO83_RS13640 PF02622 Uncharacterized ACR, COG1678 CJO83_RS13645 PF00849 RNA pseudouridylate synthase CJO83_RS13645 PF01479 S4 domain CJO83_RS13655 PF01584 CheW-like domain CJO83_RS13655 PF02895 Signal transducing histidine kinase, homodimeric domain CJO83_RS13655 PF00072 Response regulator receiver domain CJO83_RS13655 PF01627 Hpt domain CJO83_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS13660 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJO83_RS13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS13670 PF00072 Response regulator receiver domain CJO83_RS13675 PF00072 Response regulator receiver domain CJO83_RS13680 PF00301 Rubredoxin CJO83_RS13685 PF00202 Aminotransferase class-III CJO83_RS13690 PF00701 Dihydrodipicolinate synthetase family CJO83_RS13700 PF04011 LemA family CJO83_RS13745 PF00263 Bacterial type II and III secretion system protein CJO83_RS13745 PF13629 Pilus formation protein N terminal region CJO83_RS13745 PF04972 BON domain CJO83_RS13760 PF00437 Type II/IV secretion system protein CJO83_RS13810 PF05987 Bacterial protein of unknown function (DUF898) CJO83_RS13815 PF00118 TCP-1/cpn60 chaperonin family CJO83_RS13820 PF00166 Chaperonin 10 Kd subunit CJO83_RS13840 PF00174 Oxidoreductase molybdopterin binding domain CJO83_RS13845 PF01292 Prokaryotic cytochrome b561 CJO83_RS13850 PF13737 Transposase DDE domain CJO83_RS13855 PF04381 Putative exonuclease, RdgC CJO83_RS13860 PF13737 Transposase DDE domain CJO83_RS13880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS13880 PF03466 LysR substrate binding domain CJO83_RS13885 PF00892 EamA-like transporter family CJO83_RS13925 PF00672 HAMP domain CJO83_RS13925 PF02203 Tar ligand binding domain homologue CJO83_RS13925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS13930 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS13930 PF00107 Zinc-binding dehydrogenase CJO83_RS13935 PF00756 Putative esterase CJO83_RS13950 PF04403 Paraquat-inducible protein A CJO83_RS13955 PF02470 MlaD protein CJO83_RS13965 PF00155 Aminotransferase class I and II CJO83_RS13965 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS13995 PF11871 Domain of unknown function (DUF3391) CJO83_RS13995 PF01966 HD domain CJO83_RS14010 PF01425 Amidase CJO83_RS14015 PF00563 EAL domain CJO83_RS14015 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS14015 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS14030 PF07690 Major Facilitator Superfamily CJO83_RS14035 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CJO83_RS14040 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJO83_RS14050 PF13737 Transposase DDE domain CJO83_RS14060 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS14070 PF01300 Telomere recombination CJO83_RS14070 PF03481 Putative GTP-binding controlling metal-binding CJO83_RS14075 PF02222 ATP-grasp domain CJO83_RS14075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJO83_RS14080 PF00731 AIR carboxylase CJO83_RS14085 PF01259 SAICAR synthetase CJO83_RS14090 PF01116 Fructose-bisphosphate aldolase class-II CJO83_RS14095 PF00224 Pyruvate kinase, barrel domain CJO83_RS14095 PF02887 Pyruvate kinase, alpha/beta domain CJO83_RS14100 PF00162 Phosphoglycerate kinase CJO83_RS14105 PF00892 EamA-like transporter family CJO83_RS14120 PF01063 Amino-transferase class IV CJO83_RS14130 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJO83_RS14140 PF00561 alpha/beta hydrolase fold CJO83_RS14150 PF01435 Peptidase family M48 CJO83_RS14150 PF13181 Tetratricopeptide repeat CJO83_RS14155 PF01967 MoaC family CJO83_RS14165 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS14165 PF00114 Pilin (bacterial filament) CJO83_RS14175 PF03741 Integral membrane protein TerC family CJO83_RS14180 PF00549 CoA-ligase CJO83_RS14180 PF02629 CoA binding domain CJO83_RS14185 PF08442 ATP-grasp domain CJO83_RS14185 PF00549 CoA-ligase CJO83_RS14195 PF02631 RecX family CJO83_RS14200 PF00154 recA bacterial DNA recombination protein CJO83_RS14205 PF00072 Response regulator receiver domain CJO83_RS14205 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS14210 PF08521 Two-component sensor kinase N-terminal CJO83_RS14210 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS14210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS14220 PF08946 Osmosensory transporter coiled coil CJO83_RS14220 PF00083 Sugar (and other) transporter CJO83_RS14240 PF02384 N-6 DNA Methylase CJO83_RS14250 PF01381 Helix-turn-helix CJO83_RS14290 PF03432 Relaxase/Mobilisation nuclease domain CJO83_RS14300 PF01494 FAD binding domain CJO83_RS14310 PF00072 Response regulator receiver domain CJO83_RS14310 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS14315 PF03466 LysR substrate binding domain CJO83_RS14315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS14320 PF05726 Pirin C-terminal cupin domain CJO83_RS14320 PF02678 Pirin CJO83_RS14325 PF01636 Phosphotransferase enzyme family CJO83_RS14330 PF00270 DEAD/DEAH box helicase CJO83_RS14330 PF00271 Helicase conserved C-terminal domain CJO83_RS14340 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS14345 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS14345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS14345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS14345 PF09317 Domain of unknown function (DUF1974) CJO83_RS14360 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS14360 PF00501 AMP-binding enzyme CJO83_RS14385 PF00919 Uncharacterized protein family UPF0004 CJO83_RS14385 PF01938 TRAM domain CJO83_RS14385 PF04055 Radical SAM superfamily CJO83_RS14390 PF02562 PhoH-like protein CJO83_RS14395 PF02130 Uncharacterized protein family UPF0054 CJO83_RS14400 PF00571 CBS domain CJO83_RS14400 PF03471 Transporter associated domain CJO83_RS14405 PF00795 Carbon-nitrogen hydrolase CJO83_RS14410 PF02091 Glycyl-tRNA synthetase alpha subunit CJO83_RS14420 PF02092 Glycyl-tRNA synthetase beta subunit CJO83_RS14420 PF05746 DALR anticodon binding domain CJO83_RS14430 PF01553 Acyltransferase CJO83_RS14445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO83_RS14450 PF00892 EamA-like transporter family CJO83_RS14455 PF00398 Ribosomal RNA adenine dimethylase CJO83_RS14460 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJO83_RS14465 PF09312 SurA N-terminal domain CJO83_RS14470 PF04453 LPS transport system D CJO83_RS14475 PF01636 Phosphotransferase enzyme family CJO83_RS14490 PF00483 Nucleotidyl transferase CJO83_RS14495 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS14495 PF00563 EAL domain CJO83_RS14495 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS14500 PF00557 Metallopeptidase family M24 CJO83_RS14500 PF05195 Aminopeptidase P, N-terminal domain CJO83_RS14505 PF01494 FAD binding domain CJO83_RS14510 PF01266 FAD dependent oxidoreductase CJO83_RS14515 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CJO83_RS14525 PF01207 Dihydrouridine synthase (Dus) CJO83_RS14530 PF02954 Bacterial regulatory protein, Fis family CJO83_RS14535 PF01808 AICARFT/IMPCHase bienzyme CJO83_RS14535 PF02142 MGS-like domain CJO83_RS14540 PF02075 Crossover junction endodeoxyribonuclease RuvC CJO83_RS14550 PF01330 RuvA N terminal domain CJO83_RS14550 PF07499 RuvA, C-terminal domain CJO83_RS14555 PF17864 RuvB AAA lid domain CJO83_RS14555 PF05491 RuvB C-terminal winged helix domain CJO83_RS14555 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJO83_RS14560 PF00300 Histidine phosphatase superfamily (branch 1) CJO83_RS14570 PF02580 D-Tyr-tRNA(Tyr) deacylase CJO83_RS14575 PF00579 tRNA synthetases class I (W and Y) CJO83_RS14575 PF01479 S4 domain CJO83_RS14580 PF03702 Anhydro-N-acetylmuramic acid kinase CJO83_RS14585 PF01521 Iron-sulphur cluster biosynthesis CJO83_RS14600 PF00380 Ribosomal protein S9/S16 CJO83_RS14605 PF00572 Ribosomal protein L13 CJO83_RS14625 PF01979 Amidohydrolase family CJO83_RS14630 PF05161 MOFRL family CJO83_RS14630 PF13660 Domain of unknown function (DUF4147) CJO83_RS14635 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS14640 PF13230 Glutamine amidotransferases class-II CJO83_RS14645 PF00005 ABC transporter CJO83_RS14650 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS14655 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS14660 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS14665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJO83_RS14665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJO83_RS14675 PF00005 ABC transporter CJO83_RS14675 PF00664 ABC transporter transmembrane region CJO83_RS14680 PF03061 Thioesterase superfamily CJO83_RS14685 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS14690 PF02803 Thiolase, C-terminal domain CJO83_RS14690 PF00108 Thiolase, N-terminal domain CJO83_RS14695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO83_RS14695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO83_RS14695 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS14700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS14700 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJO83_RS14700 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS14700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS14710 PF01144 Coenzyme A transferase CJO83_RS14715 PF13091 PLD-like domain CJO83_RS14720 PF03372 Endonuclease/Exonuclease/phosphatase family CJO83_RS14725 PF00293 NUDIX domain CJO83_RS14735 PF00152 tRNA synthetases class II (D, K and N) CJO83_RS14735 PF02938 GAD domain CJO83_RS14735 PF01336 OB-fold nucleic acid binding domain CJO83_RS14755 PF05724 Thiopurine S-methyltransferase (TPMT) CJO83_RS14760 PF03109 ABC1 family CJO83_RS14775 PF01209 ubiE/COQ5 methyltransferase family CJO83_RS14785 PF06472 ABC transporter transmembrane region 2 CJO83_RS14785 PF00005 ABC transporter CJO83_RS14800 PF09335 SNARE associated Golgi protein CJO83_RS14805 PF07670 Nucleoside recognition CJO83_RS14815 PF17655 Inward rectifier potassium channel C-terminal domain CJO83_RS14815 PF07885 Ion channel CJO83_RS14820 PF00585 C-terminal regulatory domain of Threonine dehydratase CJO83_RS14820 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS14825 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CJO83_RS14825 PF14489 QueF-like protein CJO83_RS14855 PF00501 AMP-binding enzyme CJO83_RS14855 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS14860 PF01202 Shikimate kinase CJO83_RS14870 PF07859 alpha/beta hydrolase fold CJO83_RS14875 PF04143 Sulphur transport CJO83_RS14905 PF07977 FabA-like domain CJO83_RS14925 PF01522 Polysaccharide deacetylase CJO83_RS14930 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS14930 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS14955 PF01527 Transposase CJO83_RS14960 PF00436 Single-strand binding protein family CJO83_RS14965 PF07690 Major Facilitator Superfamily CJO83_RS14970 PF17755 UvrA DNA-binding domain CJO83_RS14970 PF17760 UvrA interaction domain CJO83_RS14980 PF01810 LysE type translocator CJO83_RS14985 PF00156 Phosphoribosyl transferase domain CJO83_RS14990 PF01965 DJ-1/PfpI family CJO83_RS15000 PF00999 Sodium/hydrogen exchanger family CJO83_RS15000 PF02080 TrkA-C domain CJO83_RS15000 PF02254 TrkA-N domain CJO83_RS15010 PF00571 CBS domain CJO83_RS15010 PF01380 SIS domain CJO83_RS15030 PF00005 ABC transporter CJO83_RS15035 PF04963 Sigma-54 factor, core binding domain CJO83_RS15035 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJO83_RS15035 PF04552 Sigma-54, DNA binding domain CJO83_RS15040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJO83_RS15045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJO83_RS15050 PF07475 HPr Serine kinase C-terminal domain CJO83_RS15050 PF02603 HPr Serine kinase N terminus CJO83_RS15060 PF03668 P-loop ATPase protein family CJO83_RS15070 PF10576 Iron-sulfur binding domain of endonuclease III CJO83_RS15070 PF00730 HhH-GPD superfamily base excision DNA repair protein CJO83_RS15070 PF00633 Helix-hairpin-helix motif CJO83_RS15070 PF14815 NUDIX domain CJO83_RS15080 PF06827 Zinc finger found in FPG and IleRS CJO83_RS15080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJO83_RS15080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJO83_RS15090 PF03550 Outer membrane lipoprotein LolB CJO83_RS15095 PF00288 GHMP kinases N terminal domain CJO83_RS15095 PF08544 GHMP kinases C terminal CJO83_RS15105 PF14572 Phosphoribosyl synthetase-associated domain CJO83_RS15105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJO83_RS15110 PF01386 Ribosomal L25p family CJO83_RS15110 PF14693 Ribosomal protein TL5, C-terminal domain CJO83_RS15115 PF01195 Peptidyl-tRNA hydrolase CJO83_RS15125 PF00037 4Fe-4S binding domain CJO83_RS15130 PF01467 Cytidylyltransferase-like CJO83_RS15140 PF05193 Peptidase M16 inactive domain CJO83_RS15145 PF00675 Insulinase (Peptidase family M16) CJO83_RS15145 PF05193 Peptidase M16 inactive domain CJO83_RS15150 PF00448 SRP54-type protein, GTPase domain CJO83_RS15150 PF02881 SRP54-type protein, helical bundle domain CJO83_RS15155 PF01810 LysE type translocator CJO83_RS15160 PF14497 Glutathione S-transferase, C-terminal domain CJO83_RS15160 PF02798 Glutathione S-transferase, N-terminal domain CJO83_RS15165 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO83_RS15170 PF03861 ANTAR domain CJO83_RS15170 PF08376 Nitrate and nitrite sensing CJO83_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS15190 PF00005 ABC transporter CJO83_RS15195 PF02885 Glycosyl transferase family, helical bundle domain CJO83_RS15200 PF05726 Pirin C-terminal cupin domain CJO83_RS15200 PF02678 Pirin CJO83_RS15210 PF00563 EAL domain CJO83_RS15210 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS15210 PF13188 PAS domain CJO83_RS15210 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS15215 PF04545 Sigma-70, region 4 CJO83_RS15215 PF04542 Sigma-70 region 2 CJO83_RS15215 PF00140 Sigma-70 factor, region 1.2 CJO83_RS15220 PF02630 SCO1/SenC CJO83_RS15225 PF01040 UbiA prenyltransferase family CJO83_RS15230 PF02628 Cytochrome oxidase assembly protein CJO83_RS15250 PF00510 Cytochrome c oxidase subunit III CJO83_RS15260 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CJO83_RS15265 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS15270 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CJO83_RS15270 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO83_RS15280 PF08241 Methyltransferase domain CJO83_RS15285 PF00156 Phosphoribosyl transferase domain CJO83_RS15290 PF00588 SpoU rRNA Methylase family CJO83_RS15295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJO83_RS15295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJO83_RS15300 PF02556 Preprotein translocase subunit SecB CJO83_RS15305 PF00462 Glutaredoxin CJO83_RS15310 PF00581 Rhodanese-like domain CJO83_RS15315 PF00300 Histidine phosphatase superfamily (branch 1) CJO83_RS15320 PF13180 PDZ domain CJO83_RS15320 PF03572 Peptidase family S41 CJO83_RS15325 PF00899 ThiF family CJO83_RS15330 PF00210 Ferritin-like domain CJO83_RS15340 PF05524 PEP-utilising enzyme, N-terminal CJO83_RS15340 PF00391 PEP-utilising enzyme, mobile domain CJO83_RS15340 PF02896 PEP-utilising enzyme, TIM barrel domain CJO83_RS15345 PF00381 PTS HPr component phosphorylation site CJO83_RS15355 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJO83_RS15355 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJO83_RS15365 PF00909 Ammonium Transporter Family CJO83_RS15370 PF00543 Nitrogen regulatory protein P-II CJO83_RS15380 PF04380 Membrane fusogenic activity CJO83_RS15395 PF05598 Transposase domain (DUF772) CJO83_RS15395 PF01609 Transposase DDE domain CJO83_RS15435 PF01609 Transposase DDE domain CJO83_RS15435 PF05598 Transposase domain (DUF772) CJO83_RS15535 PF05598 Transposase domain (DUF772) CJO83_RS15535 PF01609 Transposase DDE domain CJO83_RS15545 PF00264 Common central domain of tyrosinase CJO83_RS15560 PF01661 Macro domain CJO83_RS15565 PF00578 AhpC/TSA family CJO83_RS15570 PF02954 Bacterial regulatory protein, Fis family CJO83_RS15570 PF00072 Response regulator receiver domain CJO83_RS15570 PF00158 Sigma-54 interaction domain CJO83_RS15575 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS15580 PF00375 Sodium:dicarboxylate symporter family CJO83_RS15595 PF07943 Penicillin-binding protein 5, C-terminal domain CJO83_RS15595 PF00768 D-alanyl-D-alanine carboxypeptidase CJO83_RS15600 PF04359 Protein of unknown function (DUF493) CJO83_RS15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS15605 PF03466 LysR substrate binding domain CJO83_RS15615 PF03099 Biotin/lipoate A/B protein ligase family CJO83_RS15620 PF04055 Radical SAM superfamily CJO83_RS15620 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJO83_RS15660 PF00005 ABC transporter CJO83_RS15660 PF09383 NIL domain CJO83_RS15665 PF02405 Permease MlaE CJO83_RS15670 PF03099 Biotin/lipoate A/B protein ligase family CJO83_RS15670 PF08279 HTH domain CJO83_RS15670 PF02237 Biotin protein ligase C terminal domain CJO83_RS15675 PF03309 Type III pantothenate kinase CJO83_RS15685 PF01467 Cytidylyltransferase-like CJO83_RS15695 PF00255 Glutathione peroxidase CJO83_RS15710 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS15740 PF00561 alpha/beta hydrolase fold CJO83_RS15745 PF12091 Protein of unknown function (DUF3567) CJO83_RS15755 PF00809 Pterin binding enzyme CJO83_RS15755 PF02607 B12 binding domain CJO83_RS15755 PF02310 B12 binding domain CJO83_RS15755 PF02574 Homocysteine S-methyltransferase CJO83_RS15755 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJO83_RS15760 PF02310 B12 binding domain CJO83_RS15760 PF02607 B12 binding domain CJO83_RS15760 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJO83_RS15760 PF00809 Pterin binding enzyme CJO83_RS15760 PF02574 Homocysteine S-methyltransferase CJO83_RS15765 PF01609 Transposase DDE domain CJO83_RS15765 PF05598 Transposase domain (DUF772) CJO83_RS15775 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS15775 PF00072 Response regulator receiver domain CJO83_RS15780 PF04397 LytTr DNA-binding domain CJO83_RS15780 PF00072 Response regulator receiver domain CJO83_RS15790 PF17200 Single Cache domain 2 CJO83_RS15790 PF07730 Histidine kinase CJO83_RS15800 PF00750 tRNA synthetases class I (R) CJO83_RS15800 PF03485 Arginyl tRNA synthetase N terminal domain CJO83_RS15800 PF05746 DALR anticodon binding domain CJO83_RS15810 PF13462 Thioredoxin CJO83_RS15815 PF00106 short chain dehydrogenase CJO83_RS15825 PF13737 Transposase DDE domain CJO83_RS15830 PF13296 Putative type VI secretion system Rhs element Vgr CJO83_RS15830 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS15830 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJO83_RS15860 PF03992 Antibiotic biosynthesis monooxygenase CJO83_RS15870 PF13411 MerR HTH family regulatory protein CJO83_RS15875 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS15875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS15875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS15880 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CJO83_RS15885 PF00484 Carbonic anhydrase CJO83_RS15890 PF00108 Thiolase, N-terminal domain CJO83_RS15890 PF02803 Thiolase, C-terminal domain CJO83_RS15900 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS15900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS15900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS15915 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS15925 PF01039 Carboxyl transferase domain CJO83_RS15935 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS15940 PF06968 Biotin and Thiamin Synthesis associated domain CJO83_RS15940 PF04055 Radical SAM superfamily CJO83_RS15945 PF00289 Biotin carboxylase, N-terminal domain CJO83_RS15945 PF00364 Biotin-requiring enzyme CJO83_RS15945 PF18140 Propionyl-coenzyme A carboxylase BT domain CJO83_RS15945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO83_RS15945 PF02785 Biotin carboxylase C-terminal domain CJO83_RS15960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO83_RS15965 PF00682 HMGL-like CJO83_RS15990 PF00561 alpha/beta hydrolase fold CJO83_RS16005 PF02567 Phenazine biosynthesis-like protein CJO83_RS16015 PF06594 Haemolysin-type calcium binding protein related domain CJO83_RS16015 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CJO83_RS16015 PF06594 Haemolysin-type calcium binding protein related domain CJO83_RS16015 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CJO83_RS16025 PF01609 Transposase DDE domain CJO83_RS16025 PF05598 Transposase domain (DUF772) CJO83_RS16035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJO83_RS16035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJO83_RS16040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS16040 PF03466 LysR substrate binding domain CJO83_RS16060 PF07969 Amidohydrolase family CJO83_RS16075 PF01642 Methylmalonyl-CoA mutase CJO83_RS16075 PF02310 B12 binding domain CJO83_RS16110 PF06772 Bacterial low temperature requirement A protein (LtrA) CJO83_RS16120 PF00155 Aminotransferase class I and II CJO83_RS16130 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CJO83_RS16130 PF01137 RNA 3'-terminal phosphate cyclase CJO83_RS16135 PF10127 RNA repair pathway DNA polymerase beta family CJO83_RS16140 PF01139 tRNA-splicing ligase RtcB CJO83_RS16150 PF06956 Regulator of RNA terminal phosphate cyclase CJO83_RS16150 PF00158 Sigma-54 interaction domain CJO83_RS16165 PF00708 Acylphosphatase CJO83_RS16185 PF07690 Major Facilitator Superfamily CJO83_RS16195 PF03466 LysR substrate binding domain CJO83_RS16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS16200 PF02540 NAD synthase CJO83_RS16200 PF00117 Glutamine amidotransferase class-I CJO83_RS16200 PF00958 GMP synthase C terminal domain CJO83_RS16215 PF01638 HxlR-like helix-turn-helix CJO83_RS16235 PF07690 Major Facilitator Superfamily CJO83_RS16240 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJO83_RS16245 PF03466 LysR substrate binding domain CJO83_RS16245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS16255 PF00591 Glycosyl transferase family, a/b domain CJO83_RS16255 PF02885 Glycosyl transferase family, helical bundle domain CJO83_RS16255 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CJO83_RS16265 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJO83_RS16265 PF14572 Phosphoribosyl synthetase-associated domain CJO83_RS16270 PF10996 Beta-Casp domain CJO83_RS16270 PF00753 Metallo-beta-lactamase superfamily CJO83_RS16270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJO83_RS16275 PF00011 Hsp20/alpha crystallin family CJO83_RS16290 PF01292 Prokaryotic cytochrome b561 CJO83_RS16300 PF00034 Cytochrome c CJO83_RS16310 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CJO83_RS16310 PF02867 Ribonucleotide reductase, barrel domain CJO83_RS16315 PF00107 Zinc-binding dehydrogenase CJO83_RS16315 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS16325 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS16325 PF00072 Response regulator receiver domain CJO83_RS16330 PF05231 MASE1 CJO83_RS16330 PF07730 Histidine kinase CJO83_RS16330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS16335 PF13545 Crp-like helix-turn-helix domain CJO83_RS16335 PF00027 Cyclic nucleotide-binding domain CJO83_RS16370 PF05598 Transposase domain (DUF772) CJO83_RS16370 PF01609 Transposase DDE domain CJO83_RS16375 PF00582 Universal stress protein family CJO83_RS16380 PF00571 CBS domain CJO83_RS16400 PF00582 Universal stress protein family CJO83_RS16410 PF01380 SIS domain CJO83_RS16415 PF14602 Hexapeptide repeat of succinyl-transferase CJO83_RS16415 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS16415 PF12804 MobA-like NTP transferase domain CJO83_RS16425 PF01171 PP-loop family CJO83_RS16430 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJO83_RS16430 PF02558 Ketopantoate reductase PanE/ApbA CJO83_RS16435 PF01040 UbiA prenyltransferase family CJO83_RS16440 PF04030 D-arabinono-1,4-lactone oxidase CJO83_RS16440 PF01565 FAD binding domain CJO83_RS16445 PF00106 short chain dehydrogenase CJO83_RS16455 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CJO83_RS16460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJO83_RS16460 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS16480 PF00005 ABC transporter CJO83_RS16495 PF00171 Aldehyde dehydrogenase family CJO83_RS16500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS16500 PF03466 LysR substrate binding domain CJO83_RS16505 PF00202 Aminotransferase class-III CJO83_RS16510 PF00491 Arginase family CJO83_RS16520 PF00106 short chain dehydrogenase CJO83_RS16530 PF07690 Major Facilitator Superfamily CJO83_RS16545 PF00892 EamA-like transporter family CJO83_RS16550 PF00881 Nitroreductase family CJO83_RS16570 PF02698 DUF218 domain CJO83_RS16580 PF03466 LysR substrate binding domain CJO83_RS16580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS16590 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO83_RS16595 PF05360 yiaA/B two helix domain CJO83_RS16600 PF03372 Endonuclease/Exonuclease/phosphatase family CJO83_RS16605 PF00156 Phosphoribosyl transferase domain CJO83_RS16610 PF03976 Polyphosphate kinase 2 (PPK2) CJO83_RS16615 PF01678 Diaminopimelate epimerase CJO83_RS16620 PF03279 Bacterial lipid A biosynthesis acyltransferase CJO83_RS16630 PF02772 S-adenosylmethionine synthetase, central domain CJO83_RS16630 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJO83_RS16630 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJO83_RS16650 PF00571 CBS domain CJO83_RS16660 PF01037 Lrp/AsnC ligand binding domain CJO83_RS16680 PF02371 Transposase IS116/IS110/IS902 family CJO83_RS16680 PF01548 Transposase CJO83_RS16695 PF05199 GMC oxidoreductase CJO83_RS16695 PF00732 GMC oxidoreductase CJO83_RS16700 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS16705 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS16705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS16705 PF18158 Adaptive response protein AidB N-terminal domain CJO83_RS16740 PF03060 Nitronate monooxygenase CJO83_RS16745 PF13667 ThiC-associated domain CJO83_RS16745 PF01964 Radical SAM ThiC family CJO83_RS16750 PF01266 FAD dependent oxidoreductase CJO83_RS16760 PF05690 Thiazole biosynthesis protein ThiG CJO83_RS16765 PF02581 Thiamine monophosphate synthase CJO83_RS16770 PF06983 3-demethylubiquinone-9 3-methyltransferase CJO83_RS16810 PF08543 Phosphomethylpyrimidine kinase CJO83_RS16820 PF00245 Alkaline phosphatase CJO83_RS16825 PF00245 Alkaline phosphatase CJO83_RS16840 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJO83_RS16840 PF05221 S-adenosyl-L-homocysteine hydrolase CJO83_RS16845 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CJO83_RS16850 PF02219 Methylenetetrahydrofolate reductase CJO83_RS16860 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJO83_RS16865 PF01464 Transglycosylase SLT domain CJO83_RS16865 PF14718 Soluble lytic murein transglycosylase L domain CJO83_RS16875 PF00043 Glutathione S-transferase, C-terminal domain CJO83_RS16875 PF13417 Glutathione S-transferase, N-terminal domain CJO83_RS16880 PF12627 Probable RNA and SrmB- binding site of polymerase A CJO83_RS16880 PF01966 HD domain CJO83_RS16880 PF01743 Poly A polymerase head domain CJO83_RS16885 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS16890 PF05853 beta-keto acid cleavage enzyme CJO83_RS16895 PF00202 Aminotransferase class-III CJO83_RS16920 PF02954 Bacterial regulatory protein, Fis family CJO83_RS16920 PF00072 Response regulator receiver domain CJO83_RS16920 PF00158 Sigma-54 interaction domain CJO83_RS16925 PF00989 PAS fold CJO83_RS16925 PF00672 HAMP domain CJO83_RS16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS16925 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS16935 PF01029 NusB family CJO83_RS16935 PF01189 16S rRNA methyltransferase RsmB/F CJO83_RS16940 PF01435 Peptidase family M48 CJO83_RS16945 PF01810 LysE type translocator CJO83_RS16950 PF02911 Formyl transferase, C-terminal domain CJO83_RS16950 PF00551 Formyl transferase CJO83_RS16960 PF01327 Polypeptide deformylase CJO83_RS16965 PF01476 LysM domain CJO83_RS16970 PF17782 DprA winged helix domain CJO83_RS16970 PF02481 DNA recombination-mediator protein A CJO83_RS16980 PF01751 Toprim domain CJO83_RS16980 PF01131 DNA topoisomerase CJO83_RS16985 PF03466 LysR substrate binding domain CJO83_RS16985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS16990 PF00501 AMP-binding enzyme CJO83_RS16990 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS16995 PF01098 Cell cycle protein CJO83_RS17000 PF00905 Penicillin binding protein transpeptidase domain CJO83_RS17000 PF03717 Penicillin-binding Protein dimerisation domain CJO83_RS17010 PF04085 rod shape-determining protein MreC CJO83_RS17020 PF02686 Glu-tRNAGln amidotransferase C subunit CJO83_RS17025 PF01425 Amidase CJO83_RS17040 PF02637 GatB domain CJO83_RS17040 PF02934 GatB/GatE catalytic domain CJO83_RS17050 PF02899 Phage integrase, N-terminal SAM-like domain CJO83_RS17050 PF00589 Phage integrase family CJO83_RS17055 PF10672 S-adenosylmethionine-dependent methyltransferase CJO83_RS17055 PF17785 PUA-like domain CJO83_RS17075 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJO83_RS17075 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO83_RS17080 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJO83_RS17085 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJO83_RS17085 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJO83_RS17090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJO83_RS17095 PF00227 Proteasome subunit CJO83_RS17100 PF07724 AAA domain (Cdc48 subfamily) CJO83_RS17100 PF10431 C-terminal, D2-small domain, of ClpB protein CJO83_RS17100 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS17110 PF00072 Response regulator receiver domain CJO83_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS17115 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS17140 PF04542 Sigma-70 region 2 CJO83_RS17140 PF08281 Sigma-70, region 4 CJO83_RS17145 PF00696 Amino acid kinase family CJO83_RS17155 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS17160 PF13006 Insertion element 4 transposase N-terminal CJO83_RS17160 PF01609 Transposase DDE domain CJO83_RS17165 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS17165 PF00155 Aminotransferase class I and II CJO83_RS17170 PF00202 Aminotransferase class-III CJO83_RS17175 PF00171 Aldehyde dehydrogenase family CJO83_RS17180 PF00561 alpha/beta hydrolase fold CJO83_RS17200 PF04328 Selenoprotein, putative CJO83_RS17205 PF13722 5TM C-terminal transporter carbon starvation CstA CJO83_RS17205 PF02554 Carbon starvation protein CstA CJO83_RS17210 PF07730 Histidine kinase CJO83_RS17210 PF17200 Single Cache domain 2 CJO83_RS17215 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS17215 PF00072 Response regulator receiver domain CJO83_RS17220 PF01261 Xylose isomerase-like TIM barrel CJO83_RS17230 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS17230 PF00072 Response regulator receiver domain CJO83_RS17235 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CJO83_RS17235 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CJO83_RS17245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO83_RS17245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO83_RS17250 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJO83_RS17255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS17255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO83_RS17265 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS17265 PF08361 MAATS-type transcriptional repressor, C-terminal region CJO83_RS17270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS17270 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS17275 PF00873 AcrB/AcrD/AcrF family CJO83_RS17280 PF02321 Outer membrane efflux protein CJO83_RS17285 PF01165 Ribosomal protein S21 CJO83_RS17300 PF10396 GTP-binding protein TrmE N-terminus CJO83_RS17300 PF12631 MnmE helical domain CJO83_RS17300 PF01926 50S ribosome-binding GTPase CJO83_RS17305 PF14849 YidC periplasmic domain CJO83_RS17305 PF02096 60Kd inner membrane protein CJO83_RS17310 PF01809 Putative membrane protein insertion efficiency factor CJO83_RS17315 PF00825 Ribonuclease P CJO83_RS17320 PF00468 Ribosomal protein L34 CJO83_RS17330 PF13006 Insertion element 4 transposase N-terminal CJO83_RS17330 PF01609 Transposase DDE domain CJO83_RS17335 PF00313 'Cold-shock' DNA-binding domain CJO83_RS17340 PF13614 AAA domain CJO83_RS17345 PF17762 HTH domain found in ParB protein CJO83_RS17345 PF02195 ParB-like nuclease domain CJO83_RS17355 PF00483 Nucleotidyl transferase CJO83_RS17360 PF00083 Sugar (and other) transporter CJO83_RS17365 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS17365 PF02743 Cache domain CJO83_RS17370 PF00158 Sigma-54 interaction domain CJO83_RS17370 PF02954 Bacterial regulatory protein, Fis family CJO83_RS17370 PF00072 Response regulator receiver domain CJO83_RS17375 PF10086 YhfC intramembrane metalloprotease CJO83_RS17385 PF08447 PAS fold CJO83_RS17385 PF05231 MASE1 CJO83_RS17385 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS17385 PF00563 EAL domain CJO83_RS17385 PF08448 PAS fold CJO83_RS17385 PF13426 PAS domain CJO83_RS17390 PF13458 Periplasmic binding protein CJO83_RS17395 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS17400 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS17400 PF11862 Domain of unknown function (DUF3382) CJO83_RS17405 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS17405 PF00005 ABC transporter CJO83_RS17410 PF00005 ABC transporter CJO83_RS17415 PF03466 LysR substrate binding domain CJO83_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS17425 PF00654 Voltage gated chloride channel CJO83_RS17440 PF01161 Phosphatidylethanolamine-binding protein CJO83_RS17470 PF00816 H-NS histone family CJO83_RS17475 PF01609 Transposase DDE domain CJO83_RS17475 PF05598 Transposase domain (DUF772) CJO83_RS17485 PF00905 Penicillin binding protein transpeptidase domain CJO83_RS17495 PF01494 FAD binding domain CJO83_RS17500 PF00106 short chain dehydrogenase CJO83_RS17510 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS17515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJO83_RS17515 PF02770 Acyl-CoA dehydrogenase, middle domain CJO83_RS17515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJO83_RS17520 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS17520 PF00501 AMP-binding enzyme CJO83_RS17555 PF05598 Transposase domain (DUF772) CJO83_RS17555 PF01609 Transposase DDE domain CJO83_RS17575 PF05598 Transposase domain (DUF772) CJO83_RS17575 PF01609 Transposase DDE domain CJO83_RS17590 PF00083 Sugar (and other) transporter CJO83_RS17595 PF01381 Helix-turn-helix CJO83_RS17600 PF05973 Phage derived protein Gp49-like (DUF891) CJO83_RS17605 PF07690 Major Facilitator Superfamily CJO83_RS17615 PF01638 HxlR-like helix-turn-helix CJO83_RS17635 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS17635 PF00593 TonB dependent receptor CJO83_RS17660 PF17863 AAA lid domain CJO83_RS17660 PF07726 ATPase family associated with various cellular activities (AAA) CJO83_RS17670 PF01841 Transglutaminase-like superfamily CJO83_RS17670 PF13559 Domain of unknown function (DUF4129) CJO83_RS17670 PF11992 Domain of unknown function (DUF3488) CJO83_RS17675 PF00484 Carbonic anhydrase CJO83_RS17680 PF00916 Sulfate permease family CJO83_RS17680 PF01740 STAS domain CJO83_RS17710 PF04303 PrpF protein CJO83_RS17715 PF00330 Aconitase family (aconitate hydratase) CJO83_RS17715 PF00694 Aconitase C-terminal domain CJO83_RS17720 PF00285 Citrate synthase, C-terminal domain CJO83_RS17730 PF02954 Bacterial regulatory protein, Fis family CJO83_RS17730 PF00158 Sigma-54 interaction domain CJO83_RS17730 PF06506 Propionate catabolism activator CJO83_RS17735 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system CJO83_RS17740 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CJO83_RS17755 PF01609 Transposase DDE domain CJO83_RS17755 PF05598 Transposase domain (DUF772) CJO83_RS17765 PF00580 UvrD/REP helicase N-terminal domain CJO83_RS17765 PF13361 UvrD-like helicase C-terminal domain CJO83_RS17785 PF01609 Transposase DDE domain CJO83_RS17785 PF05598 Transposase domain (DUF772) CJO83_RS17790 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS17790 PF00072 Response regulator receiver domain CJO83_RS17795 PF00892 EamA-like transporter family CJO83_RS17810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS17810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO83_RS17820 PF01095 Pectinesterase CJO83_RS17835 PF14245 Type IV pilin PilA CJO83_RS17835 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS17840 PF13737 Transposase DDE domain CJO83_RS17845 PF08334 Type II secretion system (T2SS), protein G CJO83_RS17845 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS17850 PF00263 Bacterial type II and III secretion system protein CJO83_RS17850 PF03958 Bacterial type II/III secretion system short domain CJO83_RS17875 PF00437 Type II/IV secretion system protein CJO83_RS17880 PF00482 Type II secretion system (T2SS), protein F CJO83_RS17885 PF08334 Type II secretion system (T2SS), protein G CJO83_RS17885 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS17905 PF00150 Cellulase (glycosyl hydrolase family 5) CJO83_RS17915 PF01554 MatE CJO83_RS17920 PF03621 MbtH-like protein CJO83_RS17925 PF00501 AMP-binding enzyme CJO83_RS17925 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS17925 PF00668 Condensation domain CJO83_RS17925 PF00550 Phosphopantetheine attachment site CJO83_RS17925 PF00975 Thioesterase domain CJO83_RS17965 PF00266 Aminotransferase class-V CJO83_RS17970 PF08241 Methyltransferase domain CJO83_RS18025 PF07690 Major Facilitator Superfamily CJO83_RS18030 PF10282 Lactonase, 7-bladed beta-propeller CJO83_RS18060 PF01925 Sulfite exporter TauE/SafE CJO83_RS18080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO83_RS18080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJO83_RS18085 PF00561 alpha/beta hydrolase fold CJO83_RS18095 PF02600 Disulfide bond formation protein DsbB CJO83_RS18100 PF00202 Aminotransferase class-III CJO83_RS18120 PF03061 Thioesterase superfamily CJO83_RS18160 PF01048 Phosphorylase superfamily CJO83_RS18160 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CJO83_RS18175 PF05598 Transposase domain (DUF772) CJO83_RS18175 PF01609 Transposase DDE domain CJO83_RS18185 PF00069 Protein kinase domain CJO83_RS18190 PF05598 Transposase domain (DUF772) CJO83_RS18190 PF01609 Transposase DDE domain CJO83_RS18200 PF01593 Flavin containing amine oxidoreductase CJO83_RS18220 PF00072 Response regulator receiver domain CJO83_RS18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS18225 PF03466 LysR substrate binding domain CJO83_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS18230 PF00355 Rieske [2Fe-2S] domain CJO83_RS18235 PF00175 Oxidoreductase NAD-binding domain CJO83_RS18235 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS18240 PF01047 MarR family CJO83_RS18245 PF00378 Enoyl-CoA hydratase/isomerase CJO83_RS18250 PF00171 Aldehyde dehydrogenase family CJO83_RS18255 PF00501 AMP-binding enzyme CJO83_RS18255 PF07993 Male sterility protein CJO83_RS18255 PF00550 Phosphopantetheine attachment site CJO83_RS18260 PF06505 Activator of aromatic catabolism CJO83_RS18260 PF02954 Bacterial regulatory protein, Fis family CJO83_RS18260 PF00158 Sigma-54 interaction domain CJO83_RS18260 PF02830 V4R domain CJO83_RS18265 PF00171 Aldehyde dehydrogenase family CJO83_RS18280 PF07859 alpha/beta hydrolase fold CJO83_RS18285 PF04909 Amidohydrolase CJO83_RS18290 PF07690 Major Facilitator Superfamily CJO83_RS18295 PF00128 Alpha amylase, catalytic domain CJO83_RS18300 PF02446 4-alpha-glucanotransferase CJO83_RS18305 PF00128 Alpha amylase, catalytic domain CJO83_RS18305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJO83_RS18305 PF11941 Domain of unknown function (DUF3459) CJO83_RS18310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJO83_RS18310 PF00128 Alpha amylase, catalytic domain CJO83_RS18320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJO83_RS18320 PF02806 Alpha amylase, C-terminal all-beta domain CJO83_RS18320 PF00128 Alpha amylase, catalytic domain CJO83_RS18325 PF16657 Maltogenic Amylase, C-terminal domain CJO83_RS18325 PF00128 Alpha amylase, catalytic domain CJO83_RS18330 PF00128 Alpha amylase, catalytic domain CJO83_RS18330 PF11896 Domain of unknown function (DUF3416) CJO83_RS18335 PF08323 Starch synthase catalytic domain CJO83_RS18335 PF00534 Glycosyl transferases group 1 CJO83_RS18340 PF05171 Haemin-degrading HemS.ChuX domain CJO83_RS18345 PF00593 TonB dependent receptor CJO83_RS18345 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS18350 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJO83_RS18350 PF00578 AhpC/TSA family CJO83_RS18355 PF13192 Thioredoxin domain CJO83_RS18355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS18360 PF01475 Ferric uptake regulator family CJO83_RS18380 PF02421 Ferrous iron transport protein B CJO83_RS18380 PF04023 FeoA domain CJO83_RS18380 PF17910 FeoB cytosolic helical domain CJO83_RS18380 PF07670 Nucleoside recognition CJO83_RS18380 PF07664 Ferrous iron transport protein B C terminus CJO83_RS18390 PF08447 PAS fold CJO83_RS18390 PF05231 MASE1 CJO83_RS18390 PF13426 PAS domain CJO83_RS18390 PF00563 EAL domain CJO83_RS18390 PF08448 PAS fold CJO83_RS18390 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS18395 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS18395 PF00563 EAL domain CJO83_RS18395 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS18400 PF08447 PAS fold CJO83_RS18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS18420 PF01470 Pyroglutamyl peptidase CJO83_RS18435 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJO83_RS18445 PF00583 Acetyltransferase (GNAT) family CJO83_RS18490 PF01609 Transposase DDE domain CJO83_RS18490 PF05598 Transposase domain (DUF772) CJO83_RS18500 PF07687 Peptidase dimerisation domain CJO83_RS18500 PF01546 Peptidase family M20/M25/M40 CJO83_RS18520 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS18520 PF00571 CBS domain CJO83_RS18525 PF01204 Trehalase CJO83_RS18540 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS18540 PF07694 5TMR of 5TMR-LYT CJO83_RS18545 PF13520 Amino acid permease CJO83_RS18550 PF01554 MatE CJO83_RS18565 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS18575 PF01522 Polysaccharide deacetylase CJO83_RS18575 PF14883 Hypothetical glycosyl hydrolase family 13 CJO83_RS18580 PF00535 Glycosyl transferase family 2 CJO83_RS18595 PF13533 Biotin-lipoyl like CJO83_RS18600 PF03412 Peptidase C39 family CJO83_RS18600 PF00664 ABC transporter transmembrane region CJO83_RS18600 PF00005 ABC transporter CJO83_RS18635 PF01609 Transposase DDE domain CJO83_RS18635 PF05598 Transposase domain (DUF772) CJO83_RS18640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS18640 PF00672 HAMP domain CJO83_RS18640 PF02203 Tar ligand binding domain homologue CJO83_RS18660 PF03060 Nitronate monooxygenase CJO83_RS18665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS18665 PF03466 LysR substrate binding domain CJO83_RS18670 PF10400 Virulence activator alpha C-term CJO83_RS18670 PF03551 Transcriptional regulator PadR-like family CJO83_RS18680 PF02321 Outer membrane efflux protein CJO83_RS18685 PF00873 AcrB/AcrD/AcrF family CJO83_RS18690 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS18690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS18695 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS18695 PF00072 Response regulator receiver domain CJO83_RS18700 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS18700 PF00672 HAMP domain CJO83_RS18705 PF03060 Nitronate monooxygenase CJO83_RS18715 PF00582 Universal stress protein family CJO83_RS18735 PF00403 Heavy-metal-associated domain CJO83_RS18740 PF13411 MerR HTH family regulatory protein CJO83_RS18750 PF08502 LeuA allosteric (dimerisation) domain CJO83_RS18750 PF00682 HMGL-like CJO83_RS18765 PF01799 [2Fe-2S] binding domain CJO83_RS18765 PF00111 2Fe-2S iron-sulfur cluster binding domain CJO83_RS18770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJO83_RS18775 PF02566 OsmC-like protein CJO83_RS18790 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS18795 PF00330 Aconitase family (aconitate hydratase) CJO83_RS18795 PF00694 Aconitase C-terminal domain CJO83_RS18805 PF11791 Aconitate B N-terminal domain CJO83_RS18805 PF00330 Aconitase family (aconitate hydratase) CJO83_RS18805 PF06434 Aconitate hydratase 2 N-terminus CJO83_RS18810 PF05433 Glycine zipper 2TM domain CJO83_RS18815 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS18815 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS18815 PF00563 EAL domain CJO83_RS18825 PF00816 H-NS histone family CJO83_RS18835 PF13609 Gram-negative porin CJO83_RS18845 PF01609 Transposase DDE domain CJO83_RS18845 PF05598 Transposase domain (DUF772) CJO83_RS18865 PF17656 FlgA N-terminal domain CJO83_RS18865 PF13144 Chaperone for flagella basal body P-ring formation CJO83_RS18870 PF00460 Flagella basal body rod protein CJO83_RS18875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO83_RS18875 PF00460 Flagella basal body rod protein CJO83_RS18880 PF03963 Flagellar hook capping protein - N-terminal region CJO83_RS18880 PF13861 FlgD Tudor-like domain CJO83_RS18880 PF13860 FlgD Ig-like domain CJO83_RS18885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO83_RS18885 PF00460 Flagella basal body rod protein CJO83_RS18885 PF07559 Flagellar basal body protein FlaE CJO83_RS18890 PF00460 Flagella basal body rod protein CJO83_RS18890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO83_RS18895 PF00460 Flagella basal body rod protein CJO83_RS18895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJO83_RS18900 PF02107 Flagellar L-ring protein CJO83_RS18920 PF00669 Bacterial flagellin N-terminal helical region CJO83_RS18930 PF04820 Tryptophan halogenase CJO83_RS18935 PF08241 Methyltransferase domain CJO83_RS18945 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS18945 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS18950 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS18950 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS18965 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS18965 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS18985 PF00221 Aromatic amino acid lyase CJO83_RS18995 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS18995 PF00501 AMP-binding enzyme CJO83_RS19005 PF00550 Phosphopantetheine attachment site CJO83_RS19015 PF01553 Acyltransferase CJO83_RS19025 PF01311 Bacterial export proteins, family 1 CJO83_RS19030 PF01313 Bacterial export proteins, family 3 CJO83_RS19035 PF00813 FliP family CJO83_RS19040 PF04347 Flagellar biosynthesis protein, FliO CJO83_RS19045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJO83_RS19050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJO83_RS19050 PF02154 Flagellar motor switch protein FliM CJO83_RS19060 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS19060 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS19060 PF00563 EAL domain CJO83_RS19065 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS19065 PF00072 Response regulator receiver domain CJO83_RS19070 PF00700 Bacterial flagellin C-terminal helical region CJO83_RS19070 PF00669 Bacterial flagellin N-terminal helical region CJO83_RS19080 PF07196 Flagellin hook IN motif CJO83_RS19080 PF07195 Flagellar hook-associated protein 2 C-terminus CJO83_RS19080 PF02465 Flagellar hook-associated protein 2 N-terminus CJO83_RS19085 PF02561 Flagellar protein FliS CJO83_RS19095 PF01047 MarR family CJO83_RS19100 PF00535 Glycosyl transferase family 2 CJO83_RS19110 PF02049 Flagellar hook-basal body complex protein FliE CJO83_RS19115 PF01514 Secretory protein of YscJ/FliF family CJO83_RS19115 PF08345 Flagellar M-ring protein C-terminal CJO83_RS19120 PF14842 FliG N-terminal domain CJO83_RS19120 PF14841 FliG middle domain CJO83_RS19120 PF01706 FliG C-terminal domain CJO83_RS19125 PF02108 Flagellar assembly protein FliH CJO83_RS19130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO83_RS19130 PF18269 T3SS EscN ATPase C-terminal domain CJO83_RS19155 PF01590 GAF domain CJO83_RS19155 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS19155 PF00360 Phytochrome region CJO83_RS19155 PF00563 EAL domain CJO83_RS19165 PF00563 EAL domain CJO83_RS19165 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS19165 PF00360 Phytochrome region CJO83_RS19165 PF01590 GAF domain CJO83_RS19180 PF13195 Protein of unknown function (DUF4011) CJO83_RS19180 PF13087 AAA domain CJO83_RS19180 PF13086 AAA domain CJO83_RS19180 PF13195 Protein of unknown function (DUF4011) CJO83_RS19180 PF13087 AAA domain CJO83_RS19180 PF13086 AAA domain CJO83_RS19185 PF01609 Transposase DDE domain CJO83_RS19185 PF13006 Insertion element 4 transposase N-terminal CJO83_RS19205 PF00501 AMP-binding enzyme CJO83_RS19255 PF07690 Major Facilitator Superfamily CJO83_RS19265 PF00593 TonB dependent receptor CJO83_RS19265 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS19275 PF00593 TonB dependent receptor CJO83_RS19275 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS19280 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS19285 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJO83_RS19290 PF04183 IucA / IucC family CJO83_RS19290 PF06276 Ferric iron reductase FhuF-like transporter CJO83_RS19295 PF07690 Major Facilitator Superfamily CJO83_RS19300 PF04183 IucA / IucC family CJO83_RS19300 PF06276 Ferric iron reductase FhuF-like transporter CJO83_RS19305 PF06276 Ferric iron reductase FhuF-like transporter CJO83_RS19305 PF04183 IucA / IucC family CJO83_RS19310 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO83_RS19315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJO83_RS19315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJO83_RS19320 PF01738 Dienelactone hydrolase family CJO83_RS19320 PF00156 Phosphoribosyl transferase domain CJO83_RS19335 PF13533 Biotin-lipoyl like CJO83_RS19345 PF02321 Outer membrane efflux protein CJO83_RS19360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJO83_RS19365 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS19370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS19370 PF03466 LysR substrate binding domain CJO83_RS19375 PF00005 ABC transporter CJO83_RS19380 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS19385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS19390 PF01037 Lrp/AsnC ligand binding domain CJO83_RS19395 PF02423 Ornithine cyclodeaminase/mu-crystallin family CJO83_RS19405 PF13419 Haloacid dehalogenase-like hydrolase CJO83_RS19420 PF07687 Peptidase dimerisation domain CJO83_RS19420 PF01546 Peptidase family M20/M25/M40 CJO83_RS19425 PF00672 HAMP domain CJO83_RS19425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS19425 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS19430 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS19430 PF00072 Response regulator receiver domain CJO83_RS19440 PF02321 Outer membrane efflux protein CJO83_RS19445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS19445 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS19450 PF00873 AcrB/AcrD/AcrF family CJO83_RS19455 PF01230 HIT domain CJO83_RS19460 PF03616 Sodium/glutamate symporter CJO83_RS19500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO83_RS19500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO83_RS19510 PF00672 HAMP domain CJO83_RS19510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS19510 PF02203 Tar ligand binding domain homologue CJO83_RS19525 PF02350 UDP-N-acetylglucosamine 2-epimerase CJO83_RS19545 PF00924 Mechanosensitive ion channel CJO83_RS19565 PF01548 Transposase CJO83_RS19565 PF02371 Transposase IS116/IS110/IS902 family CJO83_RS19575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJO83_RS19575 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS19575 PF13296 Putative type VI secretion system Rhs element Vgr CJO83_RS19580 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS19580 PF05230 MASE2 domain CJO83_RS19585 PF01566 Natural resistance-associated macrophage protein CJO83_RS19605 PF00072 Response regulator receiver domain CJO83_RS19605 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS19610 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS19610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS19615 PF13460 NAD(P)H-binding CJO83_RS19630 PF02321 Outer membrane efflux protein CJO83_RS19635 PF13533 Biotin-lipoyl like CJO83_RS19640 PF00873 AcrB/AcrD/AcrF family CJO83_RS19650 PF11838 ERAP1-like C-terminal domain CJO83_RS19650 PF01433 Peptidase family M1 domain CJO83_RS19660 PF00149 Calcineurin-like phosphoesterase CJO83_RS19665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS19665 PF03466 LysR substrate binding domain CJO83_RS19670 PF07690 Major Facilitator Superfamily CJO83_RS19690 PF13737 Transposase DDE domain CJO83_RS19700 PF01609 Transposase DDE domain CJO83_RS19700 PF05598 Transposase domain (DUF772) CJO83_RS19730 PF01609 Transposase DDE domain CJO83_RS19730 PF05598 Transposase domain (DUF772) CJO83_RS19735 PF00067 Cytochrome P450 CJO83_RS19740 PF00892 EamA-like transporter family CJO83_RS19760 PF01063 Amino-transferase class IV CJO83_RS19775 PF03150 Di-haem cytochrome c peroxidase CJO83_RS19805 PF01958 Domain of unknown function DUF108 CJO83_RS19805 PF03447 Homoserine dehydrogenase, NAD binding domain CJO83_RS19825 PF00982 Glycosyltransferase family 20 CJO83_RS19860 PF06715 Gp5 C-terminal repeat (3 copies) CJO83_RS19860 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS19870 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CJO83_RS19885 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 CJO83_RS19890 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CJO83_RS19900 PF04965 Gene 25-like lysozyme CJO83_RS19905 PF05947 Type VI secretion system, TssF CJO83_RS19915 PF07724 AAA domain (Cdc48 subfamily) CJO83_RS19915 PF00004 ATPase family associated with various cellular activities (AAA) CJO83_RS19915 PF10431 C-terminal, D2-small domain, of ClpB protein CJO83_RS19915 PF17871 AAA lid domain CJO83_RS19920 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS19920 PF06715 Gp5 C-terminal repeat (3 copies) CJO83_RS19965 PF02638 Glycosyl hydrolase-like 10 CJO83_RS19980 PF00691 OmpA family CJO83_RS19980 PF04972 BON domain CJO83_RS19990 PF14331 ImcF-related N-terminal domain CJO83_RS19990 PF06761 Intracellular multiplication and human macrophage-killing CJO83_RS19990 PF06744 Type VI secretion protein IcmF C-terminal CJO83_RS20015 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJO83_RS20015 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS20015 PF13296 Putative type VI secretion system Rhs element Vgr CJO83_RS20065 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS20065 PF03472 Autoinducer binding domain CJO83_RS20070 PF00765 Autoinducer synthase CJO83_RS20085 PF08264 Anticodon-binding domain of tRNA CJO83_RS20085 PF00133 tRNA synthetases class I (I, L, M and V) CJO83_RS20085 PF10458 Valyl tRNA synthetase tRNA binding arm CJO83_RS20110 PF00501 AMP-binding enzyme CJO83_RS20115 PF02543 Carbamoyltransferase N-terminus CJO83_RS20115 PF16861 Carbamoyltransferase C-terminus CJO83_RS20130 PF00501 AMP-binding enzyme CJO83_RS20130 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS20130 PF00668 Condensation domain CJO83_RS20130 PF16197 Ketoacyl-synthetase C-terminal extension CJO83_RS20130 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS20130 PF14765 Polyketide synthase dehydratase CJO83_RS20130 PF00550 Phosphopantetheine attachment site CJO83_RS20130 PF08659 KR domain CJO83_RS20130 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS20145 PF00155 Aminotransferase class I and II CJO83_RS20155 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS20160 PF07690 Major Facilitator Superfamily CJO83_RS20175 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJO83_RS20175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJO83_RS20175 PF14579 Helix-hairpin-helix motif CJO83_RS20175 PF02811 PHP domain CJO83_RS20180 PF01381 Helix-turn-helix CJO83_RS20185 PF03600 Citrate transporter CJO83_RS20195 PF03144 Elongation factor Tu domain 2 CJO83_RS20195 PF03764 Elongation factor G, domain IV CJO83_RS20195 PF14492 Elongation Factor G, domain II CJO83_RS20195 PF00009 Elongation factor Tu GTP binding domain CJO83_RS20195 PF00679 Elongation factor G C-terminus CJO83_RS20210 PF00037 4Fe-4S binding domain CJO83_RS20210 PF11953 Domain of unknown function (DUF3470) CJO83_RS20225 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJO83_RS20225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJO83_RS20230 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS20230 PF00593 TonB dependent receptor CJO83_RS20240 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS20240 PF00563 EAL domain CJO83_RS20240 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS20245 PF06039 Malate:quinone oxidoreductase (Mqo) CJO83_RS20255 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS20255 PF17934 Tetracyclin repressor-like, C-terminal domain CJO83_RS20260 PF02321 Outer membrane efflux protein CJO83_RS20265 PF00873 AcrB/AcrD/AcrF family CJO83_RS20290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS20290 PF03466 LysR substrate binding domain CJO83_RS20305 PF00701 Dihydrodipicolinate synthetase family CJO83_RS20310 PF00171 Aldehyde dehydrogenase family CJO83_RS20315 PF07690 Major Facilitator Superfamily CJO83_RS20320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJO83_RS20320 PF13378 Enolase C-terminal domain-like CJO83_RS20325 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJO83_RS20325 PF08666 SAF domain CJO83_RS20330 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS20335 PF08450 SMP-30/Gluconolactonase/LRE-like region CJO83_RS20340 PF00295 Glycosyl hydrolases family 28 CJO83_RS20345 PF07690 Major Facilitator Superfamily CJO83_RS20350 PF00293 NUDIX domain CJO83_RS20350 PF01467 Cytidylyltransferase-like CJO83_RS20375 PF02203 Tar ligand binding domain homologue CJO83_RS20375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS20375 PF00672 HAMP domain CJO83_RS20380 PF01464 Transglycosylase SLT domain CJO83_RS20425 PF08281 Sigma-70, region 4 CJO83_RS20425 PF04542 Sigma-70 region 2 CJO83_RS20435 PF00072 Response regulator receiver domain CJO83_RS20435 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS20440 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS20440 PF00072 Response regulator receiver domain CJO83_RS20475 PF01313 Bacterial export proteins, family 3 CJO83_RS20480 PF00813 FliP family CJO83_RS20490 PF09483 Type III secretion protein (HpaP) CJO83_RS20495 PF00771 FHIPEP family CJO83_RS20500 PF01312 FlhB HrpN YscU SpaS Family CJO83_RS20515 PF01514 Secretory protein of YscJ/FliF family CJO83_RS20530 PF18269 T3SS EscN ATPase C-terminal domain CJO83_RS20530 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJO83_RS20530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJO83_RS20545 PF12833 Helix-turn-helix domain CJO83_RS20550 PF03958 Bacterial type II/III secretion system short domain CJO83_RS20550 PF00263 Bacterial type II and III secretion system protein CJO83_RS20580 PF00295 Glycosyl hydrolases family 28 CJO83_RS20600 PF01580 FtsK/SpoIIIE family CJO83_RS20600 PF09397 Ftsk gamma domain CJO83_RS20600 PF17854 FtsK alpha domain CJO83_RS20600 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJO83_RS20610 PF00120 Glutamine synthetase, catalytic domain CJO83_RS20610 PF03951 Glutamine synthetase, beta-Grasp domain CJO83_RS20615 PF03466 LysR substrate binding domain CJO83_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS20630 PF00171 Aldehyde dehydrogenase family CJO83_RS20635 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO83_RS20640 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJO83_RS20645 PF01361 Tautomerase enzyme CJO83_RS20650 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJO83_RS20650 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CJO83_RS20655 PF07836 DmpG-like communication domain CJO83_RS20655 PF00682 HMGL-like CJO83_RS20660 PF07690 Major Facilitator Superfamily CJO83_RS20670 PF13462 Thioredoxin CJO83_RS20680 PF05819 NolX protein CJO83_RS20690 PF00589 Phage integrase family CJO83_RS20690 PF02899 Phage integrase, N-terminal SAM-like domain CJO83_RS20710 PF03466 LysR substrate binding domain CJO83_RS20710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS20715 PF01494 FAD binding domain CJO83_RS20720 PF03466 LysR substrate binding domain CJO83_RS20720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS20725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO83_RS20740 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS20740 PF08359 YsiA-like protein, C-terminal region CJO83_RS20750 PF01609 Transposase DDE domain CJO83_RS20750 PF05598 Transposase domain (DUF772) CJO83_RS20760 PF04333 MlaA lipoprotein CJO83_RS20765 PF00072 Response regulator receiver domain CJO83_RS20765 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS20785 PF01609 Transposase DDE domain CJO83_RS20785 PF05598 Transposase domain (DUF772) CJO83_RS20870 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS20870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS20875 PF00873 AcrB/AcrD/AcrF family CJO83_RS20890 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS20895 PF00005 ABC transporter CJO83_RS20900 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS20905 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS20910 PF00106 short chain dehydrogenase CJO83_RS20915 PF03746 LamB/YcsF family CJO83_RS20925 PF02626 Carboxyltransferase domain, subdomain A and B CJO83_RS20930 PF02682 Carboxyltransferase domain, subdomain C and D CJO83_RS20935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJO83_RS20935 PF00289 Biotin carboxylase, N-terminal domain CJO83_RS20935 PF02785 Biotin carboxylase C-terminal domain CJO83_RS20940 PF00364 Biotin-requiring enzyme CJO83_RS20945 PF03466 LysR substrate binding domain CJO83_RS20945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS20950 PF00155 Aminotransferase class I and II CJO83_RS20955 PF03737 Aldolase/RraA CJO83_RS20960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO83_RS20960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJO83_RS20975 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS20975 PF00107 Zinc-binding dehydrogenase CJO83_RS20980 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJO83_RS20980 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJO83_RS20985 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJO83_RS20990 PF02233 NAD(P) transhydrogenase beta subunit CJO83_RS20995 PF13609 Gram-negative porin CJO83_RS21035 PF04405 Domain of Unknown function (DUF542) CJO83_RS21035 PF01814 Hemerythrin HHE cation binding domain CJO83_RS21040 PF00158 Sigma-54 interaction domain CJO83_RS21040 PF02954 Bacterial regulatory protein, Fis family CJO83_RS21045 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS21050 PF00155 Aminotransferase class I and II CJO83_RS21055 PF08671 Anti-repressor SinI CJO83_RS21055 PF01381 Helix-turn-helix CJO83_RS21080 PF08859 DGC domain CJO83_RS21085 PF02036 SCP-2 sterol transfer family CJO83_RS21090 PF01136 Peptidase family U32 CJO83_RS21095 PF01136 Peptidase family U32 CJO83_RS21105 PF07690 Major Facilitator Superfamily CJO83_RS21110 PF07690 Major Facilitator Superfamily CJO83_RS21115 PF01568 Molydopterin dinucleotide binding domain CJO83_RS21115 PF14710 Respiratory nitrate reductase alpha N-terminal CJO83_RS21115 PF00384 Molybdopterin oxidoreductase CJO83_RS21120 PF14711 Respiratory nitrate reductase beta C-terminal CJO83_RS21120 PF13247 4Fe-4S dicluster domain CJO83_RS21125 PF02613 Nitrate reductase delta subunit CJO83_RS21130 PF02665 Nitrate reductase gamma subunit CJO83_RS21135 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJO83_RS21140 PF00672 HAMP domain CJO83_RS21140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS21140 PF07730 Histidine kinase CJO83_RS21140 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJO83_RS21145 PF00072 Response regulator receiver domain CJO83_RS21145 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS21165 PF02581 Thiamine monophosphate synthase CJO83_RS21170 PF07690 Major Facilitator Superfamily CJO83_RS21170 PF00083 Sugar (and other) transporter CJO83_RS21175 PF00465 Iron-containing alcohol dehydrogenase CJO83_RS21190 PF02630 SCO1/SenC CJO83_RS21195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJO83_RS21195 PF00034 Cytochrome c CJO83_RS21205 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS21210 PF00005 ABC transporter CJO83_RS21210 PF17755 UvrA DNA-binding domain CJO83_RS21210 PF17760 UvrA interaction domain CJO83_RS21215 PF00375 Sodium:dicarboxylate symporter family CJO83_RS21220 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS21225 PF03466 LysR substrate binding domain CJO83_RS21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS21255 PF02719 Polysaccharide biosynthesis protein CJO83_RS21265 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJO83_RS21270 PF14602 Hexapeptide repeat of succinyl-transferase CJO83_RS21270 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS21270 PF17836 PglD N-terminal domain CJO83_RS21275 PF02397 Bacterial sugar transferase CJO83_RS21290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO83_RS21290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO83_RS21295 PF12464 Maltose acetyltransferase CJO83_RS21295 PF14602 Hexapeptide repeat of succinyl-transferase CJO83_RS21315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJO83_RS21315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJO83_RS21315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJO83_RS21320 PF02350 UDP-N-acetylglucosamine 2-epimerase CJO83_RS21325 PF13614 AAA domain CJO83_RS21325 PF13807 G-rich domain on putative tyrosine kinase CJO83_RS21325 PF02706 Chain length determinant protein CJO83_RS21330 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJO83_RS21335 PF02563 Polysaccharide biosynthesis/export protein CJO83_RS21335 PF10531 SLBB domain CJO83_RS21380 PF02203 Tar ligand binding domain homologue CJO83_RS21380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS21380 PF00672 HAMP domain CJO83_RS21405 PF10005 zinc-ribbon domain CJO83_RS21405 PF15887 Putative zinc-binding metallo-peptidase CJO83_RS21420 PF05114 Protein of unknown function (DUF692) CJO83_RS21445 PF00873 AcrB/AcrD/AcrF family CJO83_RS21450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS21455 PF00072 Response regulator receiver domain CJO83_RS21455 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS21460 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS21460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS21460 PF00672 HAMP domain CJO83_RS21480 PF07690 Major Facilitator Superfamily CJO83_RS21485 PF00384 Molybdopterin oxidoreductase CJO83_RS21495 PF02634 FdhD/NarQ family CJO83_RS21500 PF13188 PAS domain CJO83_RS21500 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS21500 PF00563 EAL domain CJO83_RS21500 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS21505 PF02705 K+ potassium transporter CJO83_RS21510 PF00313 'Cold-shock' DNA-binding domain CJO83_RS21520 PF00171 Aldehyde dehydrogenase family CJO83_RS21525 PF00202 Aminotransferase class-III CJO83_RS21530 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS21530 PF00155 Aminotransferase class I and II CJO83_RS21535 PF06314 Acetoacetate decarboxylase (ADC) CJO83_RS21550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO83_RS21550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO83_RS21555 PF07715 TonB-dependent Receptor Plug Domain CJO83_RS21555 PF00593 TonB dependent receptor CJO83_RS21580 PF05598 Transposase domain (DUF772) CJO83_RS21580 PF01609 Transposase DDE domain CJO83_RS21605 PF13018 Extended Signal Peptide of Type V secretion system CJO83_RS21605 PF05860 haemagglutination activity domain CJO83_RS21605 PF13332 Hemagglutinin repeat CJO83_RS21605 PF04829 Pre-toxin domain with VENN motif CJO83_RS21610 PF02794 RTX toxin acyltransferase family CJO83_RS21615 PF08479 POTRA domain, ShlB-type CJO83_RS21615 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO83_RS21615 PF17287 POTRA domain CJO83_RS21625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJO83_RS21625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJO83_RS21640 PF00158 Sigma-54 interaction domain CJO83_RS21640 PF00072 Response regulator receiver domain CJO83_RS21640 PF02954 Bacterial regulatory protein, Fis family CJO83_RS21670 PF00437 Type II/IV secretion system protein CJO83_RS21730 PF00072 Response regulator receiver domain CJO83_RS21730 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS21745 PF08269 Cache domain CJO83_RS21745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS21755 PF16363 GDP-mannose 4,6 dehydratase CJO83_RS21760 PF02899 Phage integrase, N-terminal SAM-like domain CJO83_RS21760 PF00589 Phage integrase family CJO83_RS21765 PF02358 Trehalose-phosphatase CJO83_RS21770 PF00982 Glycosyltransferase family 20 CJO83_RS21775 PF01047 MarR family CJO83_RS21780 PF02566 OsmC-like protein CJO83_RS21785 PF07859 alpha/beta hydrolase fold CJO83_RS21795 PF03466 LysR substrate binding domain CJO83_RS21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS21800 PF07859 alpha/beta hydrolase fold CJO83_RS21805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS21810 PF00873 AcrB/AcrD/AcrF family CJO83_RS21815 PF02321 Outer membrane efflux protein CJO83_RS21820 PF12833 Helix-turn-helix domain CJO83_RS21825 PF01212 Beta-eliminating lyase CJO83_RS21845 PF01638 HxlR-like helix-turn-helix CJO83_RS21850 PF01575 MaoC like domain CJO83_RS21870 PF14765 Polyketide synthase dehydratase CJO83_RS21870 PF00550 Phosphopantetheine attachment site CJO83_RS21870 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS21870 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS21870 PF16197 Ketoacyl-synthetase C-terminal extension CJO83_RS21870 PF00107 Zinc-binding dehydrogenase CJO83_RS21870 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS21870 PF00698 Acyl transferase domain CJO83_RS21870 PF08659 KR domain CJO83_RS21880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS21880 PF03466 LysR substrate binding domain CJO83_RS21890 PF00107 Zinc-binding dehydrogenase CJO83_RS21890 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS21915 PF00106 short chain dehydrogenase CJO83_RS21930 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS21935 PF12706 Beta-lactamase superfamily domain CJO83_RS21940 PF00106 short chain dehydrogenase CJO83_RS21945 PF08240 Alcohol dehydrogenase GroES-like domain CJO83_RS21945 PF00107 Zinc-binding dehydrogenase CJO83_RS21950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS21950 PF03466 LysR substrate binding domain CJO83_RS21955 PF00230 Major intrinsic protein CJO83_RS21960 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJO83_RS21965 PF01022 Bacterial regulatory protein, arsR family CJO83_RS21975 PF01609 Transposase DDE domain CJO83_RS21975 PF05598 Transposase domain (DUF772) CJO83_RS21995 PF05076 Suppressor of fused protein (SUFU) CJO83_RS22000 PF14449 Pre-toxin TG CJO83_RS22000 PF04740 LXG domain of WXG superfamily CJO83_RS22000 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues CJO83_RS22010 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS22015 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS22020 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS22020 PF00072 Response regulator receiver domain CJO83_RS22025 PF00072 Response regulator receiver domain CJO83_RS22025 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS22030 PF04960 Glutaminase CJO83_RS22035 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS22040 PF00005 ABC transporter CJO83_RS22040 PF08402 TOBE domain CJO83_RS22045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS22045 PF03459 TOBE domain CJO83_RS22055 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS22055 PF00563 EAL domain CJO83_RS22055 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS22075 PF06906 Protein of unknown function (DUF1272) CJO83_RS22095 PF00072 Response regulator receiver domain CJO83_RS22095 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS22100 PF00672 HAMP domain CJO83_RS22100 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS22100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS22125 PF05199 GMC oxidoreductase CJO83_RS22150 PF03471 Transporter associated domain CJO83_RS22150 PF03741 Integral membrane protein TerC family CJO83_RS22155 PF03150 Di-haem cytochrome c peroxidase CJO83_RS22160 PF04185 Phosphoesterase family CJO83_RS22185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS22185 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS22185 PF00989 PAS fold CJO83_RS22185 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS22185 PF00072 Response regulator receiver domain CJO83_RS22185 PF01627 Hpt domain CJO83_RS22200 PF00005 ABC transporter CJO83_RS22200 PF03412 Peptidase C39 family CJO83_RS22200 PF00664 ABC transporter transmembrane region CJO83_RS22205 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS22225 PF07969 Amidohydrolase family CJO83_RS22235 PF02447 GntP family permease CJO83_RS22240 PF01081 KDPG and KHG aldolase CJO83_RS22245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJO83_RS22250 PF00072 Response regulator receiver domain CJO83_RS22250 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS22255 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJO83_RS22265 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS22265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS22265 PF00672 HAMP domain CJO83_RS22270 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS22270 PF00072 Response regulator receiver domain CJO83_RS22275 PF13533 Biotin-lipoyl like CJO83_RS22280 PF00873 AcrB/AcrD/AcrF family CJO83_RS22285 PF00873 AcrB/AcrD/AcrF family CJO83_RS22290 PF02321 Outer membrane efflux protein CJO83_RS22300 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS22300 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS22300 PF00563 EAL domain CJO83_RS22315 PF02322 Cytochrome bd terminal oxidase subunit II CJO83_RS22320 PF01654 Cytochrome bd terminal oxidase subunit I CJO83_RS22325 PF13188 PAS domain CJO83_RS22325 PF03707 Bacterial signalling protein N terminal repeat CJO83_RS22325 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS22325 PF00563 EAL domain CJO83_RS22330 PF00672 HAMP domain CJO83_RS22330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS22330 PF02203 Tar ligand binding domain homologue CJO83_RS22340 PF13396 Phospholipase_D-nuclease N-terminal CJO83_RS22340 PF13091 PLD-like domain CJO83_RS22355 PF01554 MatE CJO83_RS22370 PF04324 BFD-like [2Fe-2S] binding domain CJO83_RS22370 PF01568 Molydopterin dinucleotide binding domain CJO83_RS22370 PF00384 Molybdopterin oxidoreductase CJO83_RS22370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJO83_RS22375 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJO83_RS22375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS22375 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO83_RS22375 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJO83_RS22375 PF04324 BFD-like [2Fe-2S] binding domain CJO83_RS22380 PF13806 Rieske-like [2Fe-2S] domain CJO83_RS22385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJO83_RS22385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJO83_RS22385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS22385 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJO83_RS22385 PF04324 BFD-like [2Fe-2S] binding domain CJO83_RS22390 PF07690 Major Facilitator Superfamily CJO83_RS22395 PF08447 PAS fold CJO83_RS22395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS22410 PF00296 Luciferase-like monooxygenase CJO83_RS22425 PF00561 alpha/beta hydrolase fold CJO83_RS22430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO83_RS22435 PF03737 Aldolase/RraA CJO83_RS22440 PF00155 Aminotransferase class I and II CJO83_RS22445 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS22445 PF03737 Aldolase/RraA CJO83_RS22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS22455 PF03466 LysR substrate binding domain CJO83_RS22475 PF01609 Transposase DDE domain CJO83_RS22475 PF05598 Transposase domain (DUF772) CJO83_RS22485 PF13406 Transglycosylase SLT domain CJO83_RS22495 PF01654 Cytochrome bd terminal oxidase subunit I CJO83_RS22500 PF02322 Cytochrome bd terminal oxidase subunit II CJO83_RS22505 PF02558 Ketopantoate reductase PanE/ApbA CJO83_RS22505 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJO83_RS22515 PF01042 Endoribonuclease L-PSP CJO83_RS22520 PF12833 Helix-turn-helix domain CJO83_RS22550 PF07804 HipA-like C-terminal domain CJO83_RS22550 PF13657 HipA N-terminal domain CJO83_RS22560 PF07690 Major Facilitator Superfamily CJO83_RS22565 PF03466 LysR substrate binding domain CJO83_RS22565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS22570 PF02525 Flavodoxin-like fold CJO83_RS22590 PF02910 Fumarate reductase flavoprotein C-term CJO83_RS22590 PF00890 FAD binding domain CJO83_RS22595 PF01925 Sulfite exporter TauE/SafE CJO83_RS22600 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS22600 PF00501 AMP-binding enzyme CJO83_RS22610 PF03466 LysR substrate binding domain CJO83_RS22610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS22615 PF01925 Sulfite exporter TauE/SafE CJO83_RS22645 PF05552 Conserved TM helix CJO83_RS22650 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CJO83_RS22655 PF13361 UvrD-like helicase C-terminal domain CJO83_RS22655 PF00580 UvrD/REP helicase N-terminal domain CJO83_RS22670 PF07690 Major Facilitator Superfamily CJO83_RS22675 PF00206 Lyase CJO83_RS22675 PF10415 Fumarase C C-terminus CJO83_RS22690 PF05524 PEP-utilising enzyme, N-terminal CJO83_RS22690 PF00381 PTS HPr component phosphorylation site CJO83_RS22690 PF02896 PEP-utilising enzyme, TIM barrel domain CJO83_RS22690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJO83_RS22690 PF00391 PEP-utilising enzyme, mobile domain CJO83_RS22695 PF02264 LamB porin CJO83_RS22700 PF08244 Glycosyl hydrolases family 32 C terminal CJO83_RS22700 PF00251 Glycosyl hydrolases family 32 N-terminal domain CJO83_RS22705 PF00367 phosphotransferase system, EIIB CJO83_RS22705 PF02378 Phosphotransferase system, EIIC CJO83_RS22710 PF00356 Bacterial regulatory proteins, lacI family CJO83_RS22715 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CJO83_RS22715 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS22720 PF05567 Neisseria PilC beta-propeller domain CJO83_RS22740 PF00114 Pilin (bacterial filament) CJO83_RS22740 PF07963 Prokaryotic N-terminal methylation motif CJO83_RS22745 PF02675 S-adenosylmethionine decarboxylase CJO83_RS22765 PF03994 Domain of Unknown Function (DUF350) CJO83_RS22785 PF13458 Periplasmic binding protein CJO83_RS22800 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJO83_RS22800 PF00005 ABC transporter CJO83_RS22805 PF00005 ABC transporter CJO83_RS22820 PF01738 Dienelactone hydrolase family CJO83_RS22885 PF02203 Tar ligand binding domain homologue CJO83_RS22885 PF00672 HAMP domain CJO83_RS22885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS22890 PF16870 2-oxoglutarate dehydrogenase C-terminal CJO83_RS22890 PF00676 Dehydrogenase E1 component CJO83_RS22890 PF16078 2-oxoglutarate dehydrogenase N-terminus CJO83_RS22890 PF02779 Transketolase, pyrimidine binding domain CJO83_RS22895 PF01553 Acyltransferase CJO83_RS22910 PF18764 Nitrous oxide reductase propeller repeat CJO83_RS22910 PF13473 Cupredoxin-like domain CJO83_RS22910 PF18793 Nitrous oxide reductase propeller repeat 2 CJO83_RS22915 PF04205 FMN-binding domain CJO83_RS22915 PF12801 4Fe-4S binding domain CJO83_RS22920 PF05048 Periplasmic copper-binding protein (NosD) CJO83_RS22925 PF00005 ABC transporter CJO83_RS22930 PF12679 ABC-2 family transporter protein CJO83_RS22935 PF05573 NosL CJO83_RS22945 PF05860 haemagglutination activity domain CJO83_RS22945 PF13332 Hemagglutinin repeat CJO83_RS22945 PF04829 Pre-toxin domain with VENN motif CJO83_RS22945 PF13332 Hemagglutinin repeat CJO83_RS22945 PF05860 haemagglutination activity domain CJO83_RS22945 PF04829 Pre-toxin domain with VENN motif CJO83_RS22960 PF08479 POTRA domain, ShlB-type CJO83_RS22960 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO83_RS22960 PF17287 POTRA domain CJO83_RS22975 PF01037 Lrp/AsnC ligand binding domain CJO83_RS22990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO83_RS22990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJO83_RS22995 PF03831 PhnA domain CJO83_RS22995 PF08274 PhnA Zinc-Ribbon CJO83_RS23005 PF09084 NMT1/THI5 like CJO83_RS23015 PF02325 YGGT family CJO83_RS23035 PF12706 Beta-lactamase superfamily domain CJO83_RS23040 PF04542 Sigma-70 region 2 CJO83_RS23040 PF04545 Sigma-70, region 4 CJO83_RS23040 PF04539 Sigma-70 region 3 CJO83_RS23050 PF00448 SRP54-type protein, GTPase domain CJO83_RS23055 PF00771 FHIPEP family CJO83_RS23060 PF01312 FlhB HrpN YscU SpaS Family CJO83_RS23065 PF00440 Bacterial regulatory proteins, tetR family CJO83_RS23065 PF17938 Tetracyclin repressor-like, C-terminal domain CJO83_RS23070 PF07690 Major Facilitator Superfamily CJO83_RS23075 PF01220 Dehydroquinase class II CJO83_RS23080 PF08501 Shikimate dehydrogenase substrate binding domain CJO83_RS23080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJO83_RS23085 PF13609 Gram-negative porin CJO83_RS23090 PF01261 Xylose isomerase-like TIM barrel CJO83_RS23090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJO83_RS23095 PF04344 Chemotaxis phosphatase, CheZ CJO83_RS23100 PF00072 Response regulator receiver domain CJO83_RS23105 PF00072 Response regulator receiver domain CJO83_RS23105 PF01339 CheB methylesterase CJO83_RS23110 PF03975 CheD chemotactic sensory transduction CJO83_RS23115 PF01739 CheR methyltransferase, SAM binding domain CJO83_RS23115 PF03705 CheR methyltransferase, all-alpha domain CJO83_RS23120 PF00672 HAMP domain CJO83_RS23120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO83_RS23120 PF02203 Tar ligand binding domain homologue CJO83_RS23125 PF01584 CheW-like domain CJO83_RS23130 PF01627 Hpt domain CJO83_RS23130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS23130 PF09078 CheY binding CJO83_RS23130 PF02895 Signal transducing histidine kinase, homodimeric domain CJO83_RS23130 PF01584 CheW-like domain CJO83_RS23135 PF00072 Response regulator receiver domain CJO83_RS23140 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJO83_RS23140 PF00691 OmpA family CJO83_RS23145 PF01618 MotA/TolQ/ExbB proton channel family CJO83_RS23150 PF05280 Flagellar transcriptional activator (FlhC) CJO83_RS23155 PF05247 Flagellar transcriptional activator (FlhD) CJO83_RS23175 PF07690 Major Facilitator Superfamily CJO83_RS23180 PF12697 Alpha/beta hydrolase family CJO83_RS23185 PF00550 Phosphopantetheine attachment site CJO83_RS23185 PF08659 KR domain CJO83_RS23185 PF00668 Condensation domain CJO83_RS23185 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS23185 PF02801 Beta-ketoacyl synthase, C-terminal domain CJO83_RS23185 PF00501 AMP-binding enzyme CJO83_RS23185 PF16197 Ketoacyl-synthetase C-terminal extension CJO83_RS23185 PF14765 Polyketide synthase dehydratase CJO83_RS23185 PF00109 Beta-ketoacyl synthase, N-terminal domain CJO83_RS23195 PF02515 CoA-transferase family III CJO83_RS23200 PF00501 AMP-binding enzyme CJO83_RS23200 PF00668 Condensation domain CJO83_RS23200 PF00550 Phosphopantetheine attachment site CJO83_RS23200 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS23205 PF01494 FAD binding domain CJO83_RS23210 PF00202 Aminotransferase class-III CJO83_RS23215 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CJO83_RS23245 PF01266 FAD dependent oxidoreductase CJO83_RS23245 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJO83_RS23260 PF00550 Phosphopantetheine attachment site CJO83_RS23260 PF00668 Condensation domain CJO83_RS23260 PF13193 AMP-binding enzyme C-terminal domain CJO83_RS23260 PF00501 AMP-binding enzyme CJO83_RS23280 PF01588 Putative tRNA binding domain CJO83_RS23280 PF09334 tRNA synthetases class I (M) CJO83_RS23285 PF06426 Serine acetyltransferase, N-terminal CJO83_RS23285 PF00132 Bacterial transferase hexapeptide (six repeats) CJO83_RS23295 PF00672 HAMP domain CJO83_RS23295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS23295 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS23300 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS23300 PF00072 Response regulator receiver domain CJO83_RS23330 PF02887 Pyruvate kinase, alpha/beta domain CJO83_RS23330 PF00224 Pyruvate kinase, barrel domain CJO83_RS23335 PF13660 Domain of unknown function (DUF4147) CJO83_RS23335 PF05161 MOFRL family CJO83_RS23340 PF03466 LysR substrate binding domain CJO83_RS23340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS23355 PF00672 HAMP domain CJO83_RS23355 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS23355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS23355 PF16527 Two-component sensor protein CpxA, periplasmic domain CJO83_RS23360 PF00072 Response regulator receiver domain CJO83_RS23360 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS23365 PF02321 Outer membrane efflux protein CJO83_RS23370 PF00529 HlyD membrane-fusion protein of T1SS CJO83_RS23370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS23375 PF00873 AcrB/AcrD/AcrF family CJO83_RS23380 PF13382 Adenine deaminase C-terminal domain CJO83_RS23380 PF01979 Amidohydrolase family CJO83_RS23405 PF00005 ABC transporter CJO83_RS23410 PF02687 FtsX-like permease family CJO83_RS23410 PF12704 MacB-like periplasmic core domain CJO83_RS23410 PF00005 ABC transporter CJO83_RS23430 PF05598 Transposase domain (DUF772) CJO83_RS23430 PF01609 Transposase DDE domain CJO83_RS23455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS23455 PF03466 LysR substrate binding domain CJO83_RS23465 PF00248 Aldo/keto reductase family CJO83_RS23490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS23490 PF03466 LysR substrate binding domain CJO83_RS23520 PF00561 alpha/beta hydrolase fold CJO83_RS23535 PF02543 Carbamoyltransferase N-terminus CJO83_RS23535 PF16861 Carbamoyltransferase C-terminus CJO83_RS23550 PF16861 Carbamoyltransferase C-terminus CJO83_RS23550 PF02543 Carbamoyltransferase N-terminus CJO83_RS23570 PF03358 NADPH-dependent FMN reductase CJO83_RS23575 PF02254 TrkA-N domain CJO83_RS23575 PF00999 Sodium/hydrogen exchanger family CJO83_RS23600 PF01609 Transposase DDE domain CJO83_RS23600 PF05598 Transposase domain (DUF772) CJO83_RS23615 PF07732 Multicopper oxidase CJO83_RS23625 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS23630 PF00392 Bacterial regulatory proteins, gntR family CJO83_RS23630 PF07702 UTRA domain CJO83_RS23635 PF00005 ABC transporter CJO83_RS23640 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS23655 PF00072 Response regulator receiver domain CJO83_RS23655 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS23675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS23675 PF03466 LysR substrate binding domain CJO83_RS23685 PF00291 Pyridoxal-phosphate dependent enzyme CJO83_RS23690 PF08348 YheO-like PAS domain CJO83_RS23690 PF13309 HTH domain CJO83_RS23725 PF01740 STAS domain CJO83_RS23725 PF00916 Sulfate permease family CJO83_RS23740 PF03706 Lysylphosphatidylglycerol synthase TM region CJO83_RS23740 PF09924 Uncharacterised conserved protein (DUF2156) CJO83_RS23750 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS23750 PF00072 Response regulator receiver domain CJO83_RS23755 PF01694 Rhomboid family CJO83_RS23780 PF03171 2OG-Fe(II) oxygenase superfamily CJO83_RS23780 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CJO83_RS23785 PF07731 Multicopper oxidase CJO83_RS23785 PF07732 Multicopper oxidase CJO83_RS23800 PF13145 PPIC-type PPIASE domain CJO83_RS23805 PF08479 POTRA domain, ShlB-type CJO83_RS23805 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJO83_RS23805 PF17287 POTRA domain CJO83_RS23815 PF04829 Pre-toxin domain with VENN motif CJO83_RS23815 PF15526 Novel toxin 21 CJO83_RS23815 PF05860 haemagglutination activity domain CJO83_RS23815 PF13332 Hemagglutinin repeat CJO83_RS23815 PF05594 Haemagluttinin repeat CJO83_RS23860 PF13180 PDZ domain CJO83_RS23865 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS23865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS23865 PF08521 Two-component sensor kinase N-terminal CJO83_RS23870 PF00072 Response regulator receiver domain CJO83_RS23870 PF00486 Transcriptional regulatory protein, C terminal CJO83_RS23875 PF05819 NolX protein CJO83_RS23880 PF02685 Glucokinase CJO83_RS23880 PF01418 Helix-turn-helix domain, rpiR family CJO83_RS23880 PF01380 SIS domain CJO83_RS23885 PF02685 Glucokinase CJO83_RS23890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJO83_RS23900 PF00920 Dehydratase family CJO83_RS23905 PF00582 Universal stress protein family CJO83_RS23920 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJO83_RS23925 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJO83_RS23935 PF00510 Cytochrome c oxidase subunit III CJO83_RS23960 PF07690 Major Facilitator Superfamily CJO83_RS23970 PF03466 LysR substrate binding domain CJO83_RS23970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS23975 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJO83_RS23985 PF00528 Binding-protein-dependent transport system inner membrane component CJO83_RS23990 PF00491 Arginase family CJO83_RS23995 PF00196 Bacterial regulatory proteins, luxR family CJO83_RS23995 PF03472 Autoinducer binding domain CJO83_RS24010 PF06628 Catalase-related immune-responsive CJO83_RS24010 PF00199 Catalase CJO83_RS24025 PF01053 Cys/Met metabolism PLP-dependent enzyme CJO83_RS24030 PF01266 FAD dependent oxidoreductase CJO83_RS24035 PF00171 Aldehyde dehydrogenase family CJO83_RS24040 PF13458 Periplasmic binding protein CJO83_RS24045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJO83_RS24045 PF03466 LysR substrate binding domain CJO83_RS24065 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJO83_RS24065 PF13296 Putative type VI secretion system Rhs element Vgr CJO83_RS24065 PF04717 Type VI secretion system, phage-baseplate injector CJO83_RS24070 PF13609 Gram-negative porin CJO83_RS24075 PF07690 Major Facilitator Superfamily CJO83_RS24085 PF00873 AcrB/AcrD/AcrF family CJO83_RS24090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJO83_RS24095 PF02321 Outer membrane efflux protein CJO83_RS24155 PF00171 Aldehyde dehydrogenase family CJO83_RS24160 PF00180 Isocitrate/isopropylmalate dehydrogenase CJO83_RS24165 PF03328 HpcH/HpaI aldolase/citrate lyase family CJO83_RS24170 PF07690 Major Facilitator Superfamily CJO83_RS24175 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJO83_RS24175 PF08666 SAF domain CJO83_RS24180 PF00356 Bacterial regulatory proteins, lacI family CJO83_RS24185 PF02195 ParB-like nuclease domain CJO83_RS24195 PF01507 Phosphoadenosine phosphosulfate reductase family CJO83_RS24195 PF11922 Domain of unknown function (DUF3440) CJO83_RS24200 PF03895 YadA-like membrane anchor domain CJO83_RS24200 PF05658 Head domain of trimeric autotransporter adhesin CJO83_RS24200 PF05662 Coiled stalk of trimeric autotransporter adhesin CJO83_RS24200 PF05662 Coiled stalk of trimeric autotransporter adhesin CJO83_RS24200 PF05658 Head domain of trimeric autotransporter adhesin CJO83_RS24200 PF03895 YadA-like membrane anchor domain CJO83_RS24200 PF13018 Extended Signal Peptide of Type V secretion system CJO83_RS24200 PF13018 Extended Signal Peptide of Type V secretion system CJO83_RS24210 PF09456 RcsC Alpha-Beta-Loop (ABL) CJO83_RS24210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS24210 PF00072 Response regulator receiver domain CJO83_RS24210 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS24215 PF00360 Phytochrome region CJO83_RS24215 PF00563 EAL domain CJO83_RS24215 PF01590 GAF domain CJO83_RS24215 PF00990 Diguanylate cyclase, GGDEF domain CJO83_RS24230 PF13276 HTH-like domain CJO83_RS24230 PF13683 Integrase core domain CJO83_RS24260 PF02560 Cyanate lyase C-terminal domain CJO83_RS24265 PF04966 Carbohydrate-selective porin, OprB family CJO83_RS24270 PF13407 Periplasmic binding protein domain CJO83_RS24275 PF00005 ABC transporter CJO83_RS24280 PF02653 Branched-chain amino acid transport system / permease component CJO83_RS24285 PF01370 NAD dependent epimerase/dehydratase family CJO83_RS24290 PF00356 Bacterial regulatory proteins, lacI family CJO83_RS24300 PF12833 Helix-turn-helix domain CJO83_RS24320 PF03929 PepSY-associated TM region CJO83_RS24335 PF01739 CheR methyltransferase, SAM binding domain CJO83_RS24350 PF08281 Sigma-70, region 4 CJO83_RS24350 PF04542 Sigma-70 region 2 CJO83_RS24390 PF00550 Phosphopantetheine attachment site CJO83_RS24400 PF00009 Elongation factor Tu GTP binding domain CJO83_RS24400 PF03144 Elongation factor Tu domain 2 CJO83_RS24400 PF16658 Class II release factor RF3, C-terminal domain CJO83_RS24425 PF00158 Sigma-54 interaction domain CJO83_RS24425 PF02954 Bacterial regulatory protein, Fis family CJO83_RS24425 PF00072 Response regulator receiver domain CJO83_RS24430 PF00158 Sigma-54 interaction domain CJO83_RS24430 PF01590 GAF domain CJO83_RS24430 PF02954 Bacterial regulatory protein, Fis family CJO83_RS24440 PF04963 Sigma-54 factor, core binding domain CJO83_RS24440 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJO83_RS24440 PF04552 Sigma-54, DNA binding domain CJO83_RS24460 PF00512 His Kinase A (phospho-acceptor) domain CJO83_RS24460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJO83_RS24470 PF00860 Permease family