RSAL33209_RS00005	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
RSAL33209_RS00010	SM00480	DNA polymerase III beta subunit
RSAL33209_RS00015	SM01350	RSAL33209_RS00015
RSAL33209_RS00030	SM00387	Histidine kinase-like ATPases
RSAL33209_RS00030	SM00433	TopoisomeraseII
RSAL33209_RS00035	SM00434	DNA Topoisomerase IV
RSAL33209_RS00080	SM00849	Metallo-beta-lactamase superfamily
RSAL33209_RS00115	SM00020	Trypsin-like serine protease
RSAL33209_RS00125	SM00487	DEAD-like helicases superfamily
RSAL33209_RS00125	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS00200	SM00855	Phosphoglycerate mutase family
RSAL33209_RS00205	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS00210	SM00448	cheY-homologous receiver domain
RSAL33209_RS00210	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS00215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RSAL33209_RS00215	SM00387	Histidine kinase-like ATPases
RSAL33209_RS00215	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS00230	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS00290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS00355	SM00822	RSAL33209_RS00355
RSAL33209_RS00410	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS00440	SM00954	Region found in RelA / SpoT proteins
RSAL33209_RS00470	SM00354	helix_turn _helix lactose operon repressor
RSAL33209_RS00500	SM00812	Alpha-L-fucosidase
RSAL33209_RS00555	SM00429	ig-like, plexins, transcription factors
RSAL33209_RS00620	SM00642	Alpha-amylase domain
RSAL33209_RS00715	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS00730	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS00770	SM00093	SERine  Proteinase INhibitors
RSAL33209_RS00800	SM00387	Histidine kinase-like ATPases
RSAL33209_RS00800	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS00810	SM00448	cheY-homologous receiver domain
RSAL33209_RS00810	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS00820	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS00855	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS00895	SM00831	Cation transporter/ATPase, N-terminus
RSAL33209_RS01000	SM00798	AICARFT/IMPCHase bienzyme
RSAL33209_RS01000	SM00851	MGS-like domain
RSAL33209_RS01020	SM01329	RSAL33209_RS01020
RSAL33209_RS01045	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01050	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01070	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01095	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01155	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01195	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS01310	SM00829	Enoylreductase
RSAL33209_RS01380	SM01192	RSAL33209_RS01380
RSAL33209_RS01380	SM01193	RSAL33209_RS01380
RSAL33209_RS01420	SM00020	Trypsin-like serine protease
RSAL33209_RS01465	SM00710	Parallel beta-helix repeats
RSAL33209_RS01480	SM00881	CoA binding domain
RSAL33209_RS01485	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01495	SM00458	Ricin-type beta-trefoil
RSAL33209_RS01530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS01530	SM00866	RSAL33209_RS01530
RSAL33209_RS01585	SM00421	helix_turn_helix, Lux Regulon
RSAL33209_RS01585	SM00448	cheY-homologous receiver domain
RSAL33209_RS01605	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS01645	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01660	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01690	SM00855	Phosphoglycerate mutase family
RSAL33209_RS01700	SM00387	Histidine kinase-like ATPases
RSAL33209_RS01700	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS01705	SM00448	cheY-homologous receiver domain
RSAL33209_RS01705	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS01715	SM01058	CarD-like/TRCF domain
RSAL33209_RS01730	SM00840	RSAL33209_RS01730
RSAL33209_RS01735	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RSAL33209_RS01740	SM00642	Alpha-amylase domain
RSAL33209_RS01800	SM00642	Alpha-amylase domain
RSAL33209_RS01865	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01900	SM00894	Excalibur calcium-binding domain
RSAL33209_RS01915	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS01980	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RSAL33209_RS01980	SM01232	RSAL33209_RS01980
RSAL33209_RS01990	SM00986	Uracil DNA glycosylase superfamily
RSAL33209_RS01990	SM00987	UreE urease accessory protein, C-terminal domain 
RSAL33209_RS02010	SM00357	Cold shock protein domain
RSAL33209_RS02030	SM00354	helix_turn _helix lactose operon repressor
RSAL33209_RS02040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RSAL33209_RS02040	SM00387	Histidine kinase-like ATPases
RSAL33209_RS02040	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS02045	SM00448	cheY-homologous receiver domain
RSAL33209_RS02045	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS02080	SM00529	Helix-turn-helix diphteria tox regulatory element
RSAL33209_RS02080	SM00899	RSAL33209_RS02080
RSAL33209_RS02100	SM00507	HNH nucleases
RSAL33209_RS02120	SM00852	Probable molybdopterin binding domain
RSAL33209_RS02135	SM00872	Alpha mannosidase, middle domain
RSAL33209_RS02150	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS02220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS02260	SM00448	cheY-homologous receiver domain
RSAL33209_RS02260	SM00850	LytTr DNA-binding domain
RSAL33209_RS02290	SM00344	helix_turn_helix ASNC type
RSAL33209_RS02300	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS02320	SM00878	Biotin carboxylase C-terminal domain
RSAL33209_RS02330	SM00882	Coenzyme A transferase
RSAL33209_RS02335	SM00882	Coenzyme A transferase
RSAL33209_RS02355	SM00729	Elongator protein 3, MiaB family, Radical SAM
RSAL33209_RS02355	SM00876	Biotin and Thiamin Synthesis associated domain
RSAL33209_RS02405	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS02530	SM01230	RSAL33209_RS02530
RSAL33209_RS02540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS02540	SM00895	RSAL33209_RS02540
RSAL33209_RS02580	SM00903	Flavin reductase like domain
RSAL33209_RS02585	SM00895	RSAL33209_RS02585
RSAL33209_RS02610	SM00829	Enoylreductase
RSAL33209_RS02620	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS02760	SM00316	Ribosomal protein S1-like RNA-binding domain
RSAL33209_RS02825	SM00904	Riboflavin kinase
RSAL33209_RS02840	SM01387	RSAL33209_RS02840
RSAL33209_RS02845	SM00316	Ribosomal protein S1-like RNA-binding domain
RSAL33209_RS02845	SM00322	K homology RNA-binding domain
RSAL33209_RS02915	SM00448	cheY-homologous receiver domain
RSAL33209_RS02915	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS02920	SM00387	Histidine kinase-like ATPases
RSAL33209_RS02920	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS02940	SM00852	Probable molybdopterin binding domain
RSAL33209_RS02950	SM00852	Probable molybdopterin binding domain
RSAL33209_RS02985	SM01130	RSAL33209_RS02985
RSAL33209_RS02990	SM00849	Metallo-beta-lactamase superfamily
RSAL33209_RS03015	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS03030	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS03030	SM00843	RSAL33209_RS03030
RSAL33209_RS03060	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS03065	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS03075	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS03090	SM00729	Elongator protein 3, MiaB family, Radical SAM
RSAL33209_RS03120	SM00487	DEAD-like helicases superfamily
RSAL33209_RS03120	SM00491	RSAL33209_RS03120
RSAL33209_RS03130	SM00257	Lysin motif
RSAL33209_RS03195	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RSAL33209_RS03260	SM00873	B3/4 domain
RSAL33209_RS03260	SM00874	tRNA synthetase B5 domain
RSAL33209_RS03260	SM00896	Ferredoxin-fold anticodon binding domain
RSAL33209_RS03275	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS03320	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RSAL33209_RS03385	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS03385	SM01043	Bacterial transcriptional activator domain
RSAL33209_RS03470	SM00363	S4 RNA-binding domain
RSAL33209_RS03545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS03545	SM00895	RSAL33209_RS03545
RSAL33209_RS03570	SM01119	RSAL33209_RS03570
RSAL33209_RS03630	SM01060	RSAL33209_RS03630
RSAL33209_RS03655	SM00855	Phosphoglycerate mutase family
RSAL33209_RS03665	SM00421	helix_turn_helix, Lux Regulon
RSAL33209_RS03665	SM00448	cheY-homologous receiver domain
RSAL33209_RS03755	SM01005	Alanine racemase, C-terminal domain
RSAL33209_RS03760	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS03780	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS03855	SM00116	Domain in cystathionine beta-synthase and other proteins.
RSAL33209_RS03865	SM00020	Trypsin-like serine protease
RSAL33209_RS03870	SM00020	Trypsin-like serine protease
RSAL33209_RS03875	SM00020	Trypsin-like serine protease
RSAL33209_RS03900	SM00354	helix_turn _helix lactose operon repressor
RSAL33209_RS03930	SM00387	Histidine kinase-like ATPases
RSAL33209_RS03930	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS03935	SM00448	cheY-homologous receiver domain
RSAL33209_RS03935	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS03970	SM00487	DEAD-like helicases superfamily
RSAL33209_RS03970	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS03975	SM00257	Lysin motif
RSAL33209_RS04075	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS04110	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RSAL33209_RS04125	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS04145	SM00855	Phosphoglycerate mutase family
RSAL33209_RS04215	SM00421	helix_turn_helix, Lux Regulon
RSAL33209_RS04215	SM00448	cheY-homologous receiver domain
RSAL33209_RS04250	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RSAL33209_RS04255	SM00649	Ribosomal protein L11/L12
RSAL33209_RS04325	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS04335	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS04365	SM00450	Rhodanese Homology Domain
RSAL33209_RS04375	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS04395	SM00849	Metallo-beta-lactamase superfamily
RSAL33209_RS04425	SM00226	Low molecular weight phosphatase family
RSAL33209_RS04465	SM00020	Trypsin-like serine protease
RSAL33209_RS04470	SM00020	Trypsin-like serine protease
RSAL33209_RS04520	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS04535	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS04550	SM01329	RSAL33209_RS04550
RSAL33209_RS04595	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS04595	SM00962	SRP54-type protein, GTPase domain
RSAL33209_RS04595	SM00963	SRP54-type protein, helical bundle domain
RSAL33209_RS04605	SM00938	Nitrogen regulatory protein P-II
RSAL33209_RS04615	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS04615	SM00962	SRP54-type protein, GTPase domain
RSAL33209_RS04615	SM00963	SRP54-type protein, helical bundle domain
RSAL33209_RS04735	SM00825	Beta-ketoacyl synthase
RSAL33209_RS04750	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RSAL33209_RS04825	SM00429	ig-like, plexins, transcription factors
RSAL33209_RS04885	SM00344	helix_turn_helix ASNC type
RSAL33209_RS04895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS04900	SM00344	helix_turn_helix ASNC type
RSAL33209_RS04930	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS05035	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS05045	SM00838	Elongation factor G C-terminus
RSAL33209_RS05110	SM00062	Bacterial periplasmic substrate-binding proteins
RSAL33209_RS05115	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS05175	SM00116	Domain in cystathionine beta-synthase and other proteins.
RSAL33209_RS05175	SM00924	MgtE intracellular N domain
RSAL33209_RS05185	SM01011	Aminopeptidase P, N-terminal domain
RSAL33209_RS05190	SM00481	DNA polymerase alpha chain like domain
RSAL33209_RS05200	SM00487	DEAD-like helicases superfamily
RSAL33209_RS05200	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS05210	SM00955	RSAL33209_RS05210
RSAL33209_RS05255	SM00450	Rhodanese Homology Domain
RSAL33209_RS05305	SM01004	Delta-aminolevulinic acid dehydratase
RSAL33209_RS05335	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS05335	SM00930	RSAL33209_RS05335
RSAL33209_RS05340	SM00479	RSAL33209_RS05340
RSAL33209_RS05370	SM00341	Helicase and RNase D C-terminal
RSAL33209_RS05390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RSAL33209_RS05465	SM00344	helix_turn_helix ASNC type
RSAL33209_RS05470	SM00450	Rhodanese Homology Domain
RSAL33209_RS05510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RSAL33209_RS05535	SM00893	Electron transfer flavoprotein domain
RSAL33209_RS05540	SM00893	Electron transfer flavoprotein domain
RSAL33209_RS05585	SM00271	DnaJ molecular chaperone homology domain
RSAL33209_RS05605	SM00845	GatB domain
RSAL33209_RS05705	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RSAL33209_RS05765	SM00420	helix_turn_helix, Deoxyribose operon repressor
RSAL33209_RS05765	SM01134	RSAL33209_RS05765
RSAL33209_RS05855	SM00937	RSAL33209_RS05855
RSAL33209_RS05860	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS05900	SM00257	Lysin motif
RSAL33209_RS05900	SM00644	RSAL33209_RS05900
RSAL33209_RS05945	SM00529	Helix-turn-helix diphteria tox regulatory element
RSAL33209_RS05945	SM00899	RSAL33209_RS05945
RSAL33209_RS06015	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS06030	SM01240	RSAL33209_RS06030
RSAL33209_RS06040	SM01091	Transporter associated domain
RSAL33209_RS06055	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS06090	SM00829	Enoylreductase
RSAL33209_RS06110	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS06115	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS06115	SM00487	DEAD-like helicases superfamily
RSAL33209_RS06115	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS06115	SM00847	Helicase associated domain (HA2)  Add an annotation
RSAL33209_RS06155	SM00900	RSAL33209_RS06155
RSAL33209_RS06175	SM00836	DALR anticodon binding domain
RSAL33209_RS06175	SM01016	Arginyl tRNA synthetase N terminal dom
RSAL33209_RS06200	SM00357	Cold shock protein domain
RSAL33209_RS06200	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS06200	SM00959	Rho termination factor, N-terminal domain
RSAL33209_RS06205	SM00937	RSAL33209_RS06205
RSAL33209_RS06280	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS06295	SM00357	Cold shock protein domain
RSAL33209_RS06340	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS06360	SM00487	DEAD-like helicases superfamily
RSAL33209_RS06430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS06450	SM00479	RSAL33209_RS06450
RSAL33209_RS06535	SM01130	RSAL33209_RS06535
RSAL33209_RS06540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS06540	SM00895	RSAL33209_RS06540
RSAL33209_RS06550	SM00220	Serine/Threonine protein kinases, catalytic domain
RSAL33209_RS06565	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS06650	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS06670	SM00460	Transglutaminase/protease-like homologues
RSAL33209_RS06675	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS06730	SM00342	helix_turn_helix, arabinose operon control protein
RSAL33209_RS06755	SM01130	RSAL33209_RS06755
RSAL33209_RS06870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS06870	SM00866	RSAL33209_RS06870
RSAL33209_RS06935	SM00917	LeuA allosteric (dimerisation) domain
RSAL33209_RS06985	SM00855	Phosphoglycerate mutase family
RSAL33209_RS07035	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS07075	SM00387	Histidine kinase-like ATPases
RSAL33209_RS07090	SM00858	RSAL33209_RS07090
RSAL33209_RS07125	SM00957	SecA DEAD-like domain
RSAL33209_RS07125	SM00958	SecA preprotein cross-linking domain
RSAL33209_RS07165	SM00909	Sporulation and spore germination
RSAL33209_RS07170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RSAL33209_RS07170	SM00387	Histidine kinase-like ATPases
RSAL33209_RS07170	SM00388	His Kinase A (phosphoacceptor) domain
RSAL33209_RS07175	SM00448	cheY-homologous receiver domain
RSAL33209_RS07175	SM00862	Transcriptional regulatory protein, C terminal
RSAL33209_RS07240	SM00830	Chorismate mutase type II
RSAL33209_RS07245	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS07330	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RSAL33209_RS07335	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS07370	SM00020	Trypsin-like serine protease
RSAL33209_RS07425	SM01005	Alanine racemase, C-terminal domain
RSAL33209_RS07530	SM00947	Carbonic anhydrase
RSAL33209_RS07665	SM00858	RSAL33209_RS07665
RSAL33209_RS07695	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS07710	SM01240	RSAL33209_RS07710
RSAL33209_RS07715	SM00116	Domain in cystathionine beta-synthase and other proteins.
RSAL33209_RS07715	SM01240	RSAL33209_RS07715
RSAL33209_RS07735	SM00883	Chaperonin 10 Kd subunit
RSAL33209_RS07755	SM00968	SMC proteins Flexible Hinge Domain
RSAL33209_RS07760	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RSAL33209_RS07760	SM01232	RSAL33209_RS07760
RSAL33209_RS07765	SM00358	Double-stranded RNA binding motif
RSAL33209_RS07765	SM00535	Ribonuclease III family
RSAL33209_RS07800	SM00487	DEAD-like helicases superfamily
RSAL33209_RS07800	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS07805	SM01120	RSAL33209_RS07805
RSAL33209_RS07825	SM00563	Phosphate acyltransferases
RSAL33209_RS07845	SM00346	helix_turn_helix isocitrate lyase regulation
RSAL33209_RS07890	SM00740	RSAL33209_RS07890
RSAL33209_RS07895	SM00344	helix_turn_helix ASNC type
RSAL33209_RS07945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS07945	SM00895	RSAL33209_RS07945
RSAL33209_RS07975	SM01130	RSAL33209_RS07975
RSAL33209_RS08010	SM00346	helix_turn_helix isocitrate lyase regulation
RSAL33209_RS08015	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS08040	SM00829	Enoylreductase
RSAL33209_RS08095	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS08140	SM01209	RSAL33209_RS08140
RSAL33209_RS08140	SM01210	RSAL33209_RS08140
RSAL33209_RS08215	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS08215	SM01086	C-terminal, D2-small domain, of ClpB protein
RSAL33209_RS08295	SM00487	DEAD-like helicases superfamily
RSAL33209_RS08295	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS08350	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS08365	SM00020	Trypsin-like serine protease
RSAL33209_RS08385	SM00422	helix_turn_helix, mercury resistance
RSAL33209_RS08390	SM00271	DnaJ molecular chaperone homology domain
RSAL33209_RS08440	SM00857	Resolvase, N terminal domain
RSAL33209_RS08455	SM00116	Domain in cystathionine beta-synthase and other proteins.
RSAL33209_RS08455	SM01091	Transporter associated domain
RSAL33209_RS08470	SM00909	Sporulation and spore germination
RSAL33209_RS08480	SM00271	DnaJ molecular chaperone homology domain
RSAL33209_RS08500	SM00729	Elongator protein 3, MiaB family, Radical SAM
RSAL33209_RS08505	SM00838	Elongation factor G C-terminus
RSAL33209_RS08540	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RSAL33209_RS08575	SM00822	RSAL33209_RS08575
RSAL33209_RS08635	SM01409	RSAL33209_RS08635
RSAL33209_RS08640	SM00072	Guanylate kinase homologues.
RSAL33209_RS08660	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RSAL33209_RS08665	SM00851	MGS-like domain
RSAL33209_RS08665	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RSAL33209_RS08670	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RSAL33209_RS08705	SM00841	Elongation factor P, C-terminal
RSAL33209_RS08705	SM01185	RSAL33209_RS08705
RSAL33209_RS08740	SM00732	Likely ribonuclease with RNase H fold.
RSAL33209_RS08745	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RSAL33209_RS08760	SM00363	S4 RNA-binding domain
RSAL33209_RS08760	SM01390	RSAL33209_RS08760
RSAL33209_RS08770	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS08810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RSAL33209_RS08810	SM00954	Region found in RelA / SpoT proteins
RSAL33209_RS08825	SM01323	RSAL33209_RS08825
RSAL33209_RS08830	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS08835	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RSAL33209_RS08895	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RSAL33209_RS08900	SM00895	RSAL33209_RS08900
RSAL33209_RS08940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS08950	SM00244	prohibitin homologues
RSAL33209_RS08970	SM00487	DEAD-like helicases superfamily
RSAL33209_RS08970	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS08970	SM01142	RSAL33209_RS08970
RSAL33209_RS09035	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09095	SM00458	Ricin-type beta-trefoil
RSAL33209_RS09120	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09155	SM00822	RSAL33209_RS09155
RSAL33209_RS09205	SM00460	Transglutaminase/protease-like homologues
RSAL33209_RS09260	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09275	SM00822	RSAL33209_RS09275
RSAL33209_RS09295	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09310	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09335	SM00014	Acid phosphatase homologues
RSAL33209_RS09365	SM00662	RNA polymerases D
RSAL33209_RS09425	SM00822	RSAL33209_RS09425
RSAL33209_RS09525	SM01374	RSAL33209_RS09525
RSAL33209_RS09550	SM00322	K homology RNA-binding domain
RSAL33209_RS09565	SM01382	RSAL33209_RS09565
RSAL33209_RS09565	SM01383	RSAL33209_RS09565
RSAL33209_RS09585	SM01403	RSAL33209_RS09585
RSAL33209_RS09600	SM00838	Elongation factor G C-terminus
RSAL33209_RS09600	SM00889	Elongation factor G, domain IV
RSAL33209_RS09625	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS09625	SM00866	RSAL33209_RS09625
RSAL33209_RS09640	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS09650	SM00663	RNA polymerase I subunit A N-terminus
RSAL33209_RS09790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS09815	SM00829	Enoylreductase
RSAL33209_RS09820	SM00849	Metallo-beta-lactamase superfamily
RSAL33209_RS09845	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09885	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09915	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS09935	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS10025	SM00903	Flavin reductase like domain
RSAL33209_RS10035	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RSAL33209_RS10060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RSAL33209_RS10060	SM00465	GIY-YIG type nucleases (URI domain)
RSAL33209_RS10065	SM00563	Phosphate acyltransferases
RSAL33209_RS10075	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS10085	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS10095	SM00347	helix_turn_helix multiple antibiotic resistance protein
RSAL33209_RS10095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS10100	SM00849	Metallo-beta-lactamase superfamily
RSAL33209_RS10110	SM00487	DEAD-like helicases superfamily
RSAL33209_RS10110	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS10135	SM00487	DEAD-like helicases superfamily
RSAL33209_RS10135	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS10165	SM00316	Ribosomal protein S1-like RNA-binding domain
RSAL33209_RS10180	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RSAL33209_RS10180	SM00475	5'-3' exonuclease
RSAL33209_RS10180	SM00482	DNA polymerase A domain
RSAL33209_RS10240	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS10245	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS10265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS10265	SM00895	RSAL33209_RS10265
RSAL33209_RS10280	SM00448	cheY-homologous receiver domain
RSAL33209_RS10280	SM01012	RSAL33209_RS10280
RSAL33209_RS10490	SM00450	Rhodanese Homology Domain
RSAL33209_RS10540	SM00341	Helicase and RNase D C-terminal
RSAL33209_RS10540	SM00474	3'-5' exonuclease
RSAL33209_RS10555	SM00448	cheY-homologous receiver domain
RSAL33209_RS10560	SM00387	Histidine kinase-like ATPases
RSAL33209_RS10575	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS10590	SM00507	HNH nucleases
RSAL33209_RS10680	SM00434	DNA Topoisomerase IV
RSAL33209_RS10700	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS10725	SM00387	Histidine kinase-like ATPases
RSAL33209_RS10725	SM00433	TopoisomeraseII
RSAL33209_RS10775	SM00631	RSAL33209_RS10775
RSAL33209_RS10795	SM00245	tail specific protease
RSAL33209_RS10815	SM00729	Elongator protein 3, MiaB family, Radical SAM
RSAL33209_RS10835	SM01230	RSAL33209_RS10835
RSAL33209_RS10860	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS10900	SM01230	RSAL33209_RS10900
RSAL33209_RS10955	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RSAL33209_RS10975	SM00481	DNA polymerase alpha chain like domain
RSAL33209_RS11025	SM00864	Tubulin/FtsZ family, GTPase domain
RSAL33209_RS11025	SM00865	Tubulin/FtsZ family, C-terminal domain
RSAL33209_RS11120	SM00257	Lysin motif
RSAL33209_RS11125	SM00220	Serine/Threonine protein kinases, catalytic domain
RSAL33209_RS11125	SM00740	RSAL33209_RS11125
RSAL33209_RS11140	SM00563	Phosphate acyltransferases
RSAL33209_RS11170	SM00878	Biotin carboxylase C-terminal domain
RSAL33209_RS11190	SM00422	helix_turn_helix, mercury resistance
RSAL33209_RS11200	SM00422	helix_turn_helix, mercury resistance
RSAL33209_RS11205	SM00240	Forkhead associated domain
RSAL33209_RS11215	SM00257	Lysin motif
RSAL33209_RS11220	SM00822	RSAL33209_RS11220
RSAL33209_RS11240	SM00822	RSAL33209_RS11240
RSAL33209_RS11240	SM00825	Beta-ketoacyl synthase
RSAL33209_RS11240	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RSAL33209_RS11245	SM00825	Beta-ketoacyl synthase
RSAL33209_RS11245	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RSAL33209_RS11285	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS11305	SM00829	Enoylreductase
RSAL33209_RS11380	SM00822	RSAL33209_RS11380
RSAL33209_RS11405	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS11425	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS11440	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS11460	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS11465	SM00563	Phosphate acyltransferases
RSAL33209_RS11480	SM00363	S4 RNA-binding domain
RSAL33209_RS11630	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RSAL33209_RS11685	SM00062	Bacterial periplasmic substrate-binding proteins
RSAL33209_RS11695	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS11705	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RSAL33209_RS11710	SM00014	Acid phosphatase homologues
RSAL33209_RS11735	SM00861	Transketolase, pyrimidine binding domain
RSAL33209_RS11745	SM00344	helix_turn_helix ASNC type
RSAL33209_RS11920	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS11995	SM00855	Phosphoglycerate mutase family
RSAL33209_RS12000	SM00867	YceI-like domain 
RSAL33209_RS12015	SM00881	CoA binding domain
RSAL33209_RS12035	SM00421	helix_turn_helix, Lux Regulon
RSAL33209_RS12055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RSAL33209_RS12055	SM00895	RSAL33209_RS12055
RSAL33209_RS12065	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS12115	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RSAL33209_RS12115	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RSAL33209_RS12115	SM00493	RSAL33209_RS12115
RSAL33209_RS12130	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS12150	SM00450	Rhodanese Homology Domain
RSAL33209_RS12160	SM00020	Trypsin-like serine protease
RSAL33209_RS12215	SM00478	endonuclease III
RSAL33209_RS12215	SM00525	RSAL33209_RS12215
RSAL33209_RS12310	SM00420	helix_turn_helix, Deoxyribose operon repressor
RSAL33209_RS12310	SM01134	RSAL33209_RS12310
RSAL33209_RS12325	SM00100	Cyclic nucleotide-monophosphate binding domain
RSAL33209_RS12325	SM00419	helix_turn_helix, cAMP Regulatory protein
RSAL33209_RS12435	SM00411	bacterial (prokaryotic) histone like domain
RSAL33209_RS12475	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RSAL33209_RS12475	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RSAL33209_RS12585	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS12695	SM00752	Horizontally Transferred TransMembrane Domain
RSAL33209_RS12710	SM00240	Forkhead associated domain
RSAL33209_RS12715	SM00240	Forkhead associated domain
RSAL33209_RS12720	SM00331	Sigma factor PP2C-like phosphatases
RSAL33209_RS12720	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
RSAL33209_RS12735	SM00220	Serine/Threonine protein kinases, catalytic domain
RSAL33209_RS12740	SM00220	Serine/Threonine protein kinases, catalytic domain
RSAL33209_RS12740	SM00740	RSAL33209_RS12740
RSAL33209_RS12795	SM00400	zinc finger
RSAL33209_RS12795	SM00493	RSAL33209_RS12795
RSAL33209_RS12800	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RSAL33209_RS12830	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS12865	SM00563	Phosphate acyltransferases
RSAL33209_RS12920	SM00363	S4 RNA-binding domain
RSAL33209_RS12945	SM00292	breast cancer carboxy-terminal domain
RSAL33209_RS12945	SM00532	Ligase N family
RSAL33209_RS13010	SM00878	Biotin carboxylase C-terminal domain
RSAL33209_RS13050	SM01133	RSAL33209_RS13050
RSAL33209_RS13080	SM00487	DEAD-like helicases superfamily
RSAL33209_RS13080	SM00490	helicase superfamily c-terminal domain
RSAL33209_RS13080	SM00982	RSAL33209_RS13080
RSAL33209_RS13080	SM01058	CarD-like/TRCF domain
RSAL33209_RS13150	SM01400	RSAL33209_RS13150
RSAL33209_RS13170	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS13180	SM00650	Ribosomal RNA adenine dimethylases
RSAL33209_RS13185	SM01208	RSAL33209_RS13185
RSAL33209_RS13205	SM00460	Transglutaminase/protease-like homologues
RSAL33209_RS13250	SM00996	S-adenosyl-L-homocysteine hydrolase
RSAL33209_RS13250	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RSAL33209_RS13305	SM01001	AIR carboxylase
RSAL33209_RS13335	SM00947	Carbonic anhydrase
RSAL33209_RS13360	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS13390	SM00670	Large family of predicted nucleotide-binding domains
RSAL33209_RS13440	SM00420	helix_turn_helix, Deoxyribose operon repressor
RSAL33209_RS13440	SM01134	RSAL33209_RS13440
RSAL33209_RS13470	SM00422	helix_turn_helix, mercury resistance
RSAL33209_RS13500	SM00354	helix_turn _helix lactose operon repressor
RSAL33209_RS13515	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS13735	SM00354	helix_turn _helix lactose operon repressor
RSAL33209_RS13740	SM00829	Enoylreductase
RSAL33209_RS13760	SM00796	Allophanate hydrolase subunit 1
RSAL33209_RS13805	SM00420	helix_turn_helix, Deoxyribose operon repressor
RSAL33209_RS13805	SM01134	RSAL33209_RS13805
RSAL33209_RS13885	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RSAL33209_RS13895	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS13915	SM00944	Pro-kumamolisin, activation domain
RSAL33209_RS13950	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS13975	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS13990	SM00478	endonuclease III
RSAL33209_RS13990	SM00525	RSAL33209_RS13990
RSAL33209_RS14000	SM01120	RSAL33209_RS14000
RSAL33209_RS14045	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS14045	SM01086	C-terminal, D2-small domain, of ClpB protein
RSAL33209_RS14065	SM00354	helix_turn _helix lactose operon repressor
RSAL33209_RS14115	SM00905	Dihydroneopterin aldolase
RSAL33209_RS14130	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS14190	SM00450	Rhodanese Homology Domain
RSAL33209_RS14220	SM00062	Bacterial periplasmic substrate-binding proteins
RSAL33209_RS14245	SM00855	Phosphoglycerate mutase family
RSAL33209_RS14275	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RSAL33209_RS14300	SM00316	Ribosomal protein S1-like RNA-binding domain
RSAL33209_RS14305	SM00756	RSAL33209_RS14305
RSAL33209_RS14315	SM00562	RSAL33209_RS14315
RSAL33209_RS14365	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS14365	SM00994	ClpX C4-type zinc finger
RSAL33209_RS14365	SM01086	C-terminal, D2-small domain, of ClpB protein
RSAL33209_RS14395	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RSAL33209_RS14395	SM01232	RSAL33209_RS14395
RSAL33209_RS14500	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS14550	SM00479	RSAL33209_RS14550
RSAL33209_RS14600	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RSAL33209_RS14640	SM01350	RSAL33209_RS14640
RSAL33209_RS14755	SM00382	ATPases associated with a variety of cellular activities
RSAL33209_RS14760	SM00493	RSAL33209_RS14760
RSAL33209_RS14830	SM01211	RSAL33209_RS14830
RSAL33209_RS14860	SM00881	CoA binding domain
RSAL33209_RS14900	SM00788	Adenylosuccinate synthetase
RSAL33209_RS15020	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RSAL33209_RS15050	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RSAL33209_RS15050	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RSAL33209_RS15085	SM00062	Bacterial periplasmic substrate-binding proteins
RSAL33209_RS15115	SM00893	Electron transfer flavoprotein domain
RSAL33209_RS15120	SM00893	Electron transfer flavoprotein domain
RSAL33209_RS15190	SM00327	von Willebrand factor (vWF) type A domain
RSAL33209_RS15195	SM00327	von Willebrand factor (vWF) type A domain
RSAL33209_RS15245	SM00421	helix_turn_helix, Lux Regulon
RSAL33209_RS15245	SM00448	cheY-homologous receiver domain
RSAL33209_RS15580	SM00855	Phosphoglycerate mutase family
RSAL33209_RS15585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RSAL33209_RS15615	SM00470	ParB-like nuclease domain
RSAL33209_RS15630	SM00393	Putative single-stranded nucleic acids-binding domain
RSAL33209_RS15640	SM01234	RSAL33209_RS15640
RSAL33209_RS16080	SM00776	RSAL33209_RS16080
RSAL33209_RS16215	SM00530	Helix-turn-helix XRE-family like proteins 
RSAL33209_RS16385	SM00257	Lysin motif
RSAL33209_RS16385	SM00644	RSAL33209_RS16385
RSAL33209_RS16450	SM00740	RSAL33209_RS16450
RSAL33209_RS16650	SM00823	Phosphopantetheine attachment site
RSAL33209_RS16690	SM00776	RSAL33209_RS16690
