locus-tag	class	description
CUJ84_RS00015	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CUJ84_RS00020	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CUJ84_RS00030	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CUJ84_RS00035	COG1420	regulation of RNA biosynthetic process
CUJ84_RS00040	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CUJ84_RS00050	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ84_RS00060	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CUJ84_RS00065	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CUJ84_RS00070	COG1396	sequence-specific DNA binding
CUJ84_RS00075	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CUJ84_RS00080	COG4535	Mg2 and Co2 transporter CorC
CUJ84_RS00085	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CUJ84_RS00090	COG1702	phosphate starvation-inducible protein PhoH
CUJ84_RS00095	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CUJ84_RS00130	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CUJ84_RS00140	COG0180	Tryptophanyl-tRNA synthetase
CUJ84_RS00170	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CUJ84_RS00175	COG0281	malic enzyme
CUJ84_RS00175	COG0280	phosphate acetyltransferase
CUJ84_RS00195	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CUJ84_RS00200	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CUJ84_RS00205	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CUJ84_RS00205	COG0116	Belongs to the methyltransferase superfamily
CUJ84_RS00230	COG0776	regulation of translation
CUJ84_RS00235	COG0616	signal peptide processing
CUJ84_RS00235	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CUJ84_RS00245	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CUJ84_RS00250	COG1137	ATPase activity
CUJ84_RS00265	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CUJ84_RS00270	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUJ84_RS00275	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS00285	COG0840	transmembrane signaling receptor activity
CUJ84_RS00300	COG0242	peptide deformylase activity
CUJ84_RS00315	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CUJ84_RS00320	COG0101	tRNA pseudouridine synthase activity
CUJ84_RS00330	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ84_RS00335	COG2171	N-acyltransferase activity
CUJ84_RS00355	COG2169	Transcriptional regulator
CUJ84_RS00355	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CUJ84_RS00365	COG1304	FMN binding
CUJ84_RS00370	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CUJ84_RS00375	COG5484	DNA packaging
CUJ84_RS00385	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
CUJ84_RS00390	COG3920	Histidine kinase
CUJ84_RS00405	COG1278	Cold shock
CUJ84_RS00410	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CUJ84_RS00415	COG0706	membrane insertase activity
CUJ84_RS00420	COG0594	ribonuclease P activity
CUJ84_RS00425	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CUJ84_RS00430	COG0840	transmembrane signaling receptor activity
CUJ84_RS00500	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CUJ84_RS00505	COG1309	transcriptional regulator
CUJ84_RS00510	COG0667	Aldo Keto reductase
CUJ84_RS00520	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS00525	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS00530	COG3938	Belongs to the proline racemase family
CUJ84_RS00545	COG1309	transcriptional regulator
CUJ84_RS00550	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS00575	COG5001	Diguanylate cyclase
CUJ84_RS00575	COG3300	MHYT domain
CUJ84_RS00605	COG1940	carbohydrate kinase activity
CUJ84_RS00625	COG1072	(Pantothenic acid kinase))
CUJ84_RS00630	COG0418	dihydroorotase activity
CUJ84_RS00645	COG0625	glutathione transferase activity
CUJ84_RS00665	COG1309	transcriptional regulator
CUJ84_RS00670	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CUJ84_RS00680	COG0166	Belongs to the GPI family
CUJ84_RS00685	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ84_RS00695	COG3250	beta-galactosidase activity
CUJ84_RS00705	COG1174	glycine betaine transport
CUJ84_RS00710	COG1125	glycine betaine transport
CUJ84_RS00715	COG1174	glycine betaine transport
CUJ84_RS00720	COG1732	Glycine betaine
CUJ84_RS00730	COG0583	DNA-binding transcription factor activity
CUJ84_RS00735	COG3142	Participates in the control of copper homeostasis
CUJ84_RS00745	COG1063	alcohol dehydrogenase
CUJ84_RS00750	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS00775	COG2721	sulfolactate sulfo-lyase activity
CUJ84_RS00785	COG4178	(ABC) transporter
CUJ84_RS00805	COG2226	methyltransferase
CUJ84_RS00810	COG0477	Major facilitator Superfamily
CUJ84_RS00835	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CUJ84_RS00875	COG2326	polyphosphate kinase activity
CUJ84_RS00880	COG5002	protein histidine kinase activity
CUJ84_RS00890	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CUJ84_RS00895	COG0573	inorganic phosphate transmembrane transporter activity
CUJ84_RS00905	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CUJ84_RS00910	COG0704	Plays a role in the regulation of phosphate uptake
CUJ84_RS00915	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS00930	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUJ84_RS00935	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CUJ84_RS00940	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CUJ84_RS00945	COG2967	ApaG domain
CUJ84_RS00955	COG0717	Belongs to the dCTP deaminase family
CUJ84_RS00985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS01065	COG0840	transmembrane signaling receptor activity
CUJ84_RS01070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS01105	COG0167	dihydroorotate dehydrogenase activity
CUJ84_RS01110	COG0534	Mate efflux family protein
CUJ84_RS01135	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ84_RS01140	COG1959	2 iron, 2 sulfur cluster binding
CUJ84_RS01150	COG1201	RNA secondary structure unwinding
CUJ84_RS01175	COG0730	response to heat
CUJ84_RS01195	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS01200	COG0183	Belongs to the thiolase family
CUJ84_RS01210	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ84_RS01210	COG1024	Enoyl-CoA hydratase
CUJ84_RS01215	COG1278	Cold shock
CUJ84_RS01245	COG2198	Histidine kinase
CUJ84_RS01245	COG2205	protein histidine kinase activity
CUJ84_RS01245	COG0784	Response regulator, receiver
CUJ84_RS01250	COG1970	mechanosensitive ion channel activity
CUJ84_RS01255	COG0436	Aminotransferase
CUJ84_RS01265	COG5001	Diguanylate cyclase
CUJ84_RS01315	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CUJ84_RS01325	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CUJ84_RS01330	COG5328	Belongs to the UPF0262 family
CUJ84_RS01335	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CUJ84_RS01340	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CUJ84_RS01345	COG0424	maF-like protein
CUJ84_RS01350	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
CUJ84_RS01370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS01415	COG3842	ATPase activity
CUJ84_RS01425	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS01430	COG1175	transmembrane transport
CUJ84_RS01440	COG1082	Xylose isomerase domain protein TIM barrel
CUJ84_RS01445	COG1940	carbohydrate kinase activity
CUJ84_RS01450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS01455	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
CUJ84_RS01465	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS01475	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS01495	COG1063	alcohol dehydrogenase
CUJ84_RS01500	COG1609	Transcriptional regulator
CUJ84_RS01510	COG2072	flavoprotein involved in K transport
CUJ84_RS01520	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS01525	COG2144	transferase activity, transferring acyl groups
CUJ84_RS01575	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CUJ84_RS01585	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
CUJ84_RS01615	COG0346	lactoylglutathione lyase activity
CUJ84_RS01620	COG4251	negative regulation of phosphorylation
CUJ84_RS01630	COG4251	negative regulation of phosphorylation
CUJ84_RS01640	COG2197	response regulator
CUJ84_RS01665	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CUJ84_RS01665	COG4651	solute:proton antiporter activity
CUJ84_RS01675	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CUJ84_RS01680	COG0840	transmembrane signaling receptor activity
CUJ84_RS01690	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS01695	COG0643	Histidine kinase
CUJ84_RS01695	COG2198	Histidine kinase
CUJ84_RS01700	COG0835	chemotaxis
CUJ84_RS01705	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CUJ84_RS01710	COG2201	protein-glutamate methylesterase activity
CUJ84_RS01715	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS01720	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
CUJ84_RS01730	COG1766	The M ring may be actively involved in energy transduction
CUJ84_RS01735	COG2771	luxR family
CUJ84_RS01750	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUJ84_RS01760	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUJ84_RS01765	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUJ84_RS01770	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CUJ84_RS01775	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CUJ84_RS01780	COG4786	Flagellar basal body rod
CUJ84_RS01785	COG1157	protein secretion by the type III secretion system
CUJ84_RS01795	COG1815	bacterial-type flagellum-dependent cell motility
CUJ84_RS01800	COG1558	bacterial-type flagellum-dependent cell motility
CUJ84_RS01805	COG1677	Flagellar hook-basal body complex protein FliE
CUJ84_RS01810	COG4786	Flagellar basal body rod
CUJ84_RS01815	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CUJ84_RS01820	COG1706	bacterial-type flagellum-dependent cell motility
CUJ84_RS01830	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CUJ84_RS01840	COG1338	Plays a role in the flagellum-specific transport system
CUJ84_RS01870	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CUJ84_RS01880	COG1360	Flagellar Motor Protein
CUJ84_RS01905	COG1749	Flagellar hook protein flgE
CUJ84_RS01925	COG5443	negative regulation of bacterial-type flagellum assembly
CUJ84_RS01935	COG4794	Type iii secretion
CUJ84_RS01940	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CUJ84_RS01945	COG1684	flagellar biosynthetic protein fliR
CUJ84_RS01970	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
CUJ84_RS01990	COG1609	Transcriptional regulator
CUJ84_RS01995	COG1653	transport
CUJ84_RS02000	COG1175	transmembrane transport
CUJ84_RS02005	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS02010	COG0366	Alpha amylase catalytic
CUJ84_RS02015	COG3842	ATPase activity
CUJ84_RS02025	COG0129	dihydroxy-acid dehydratase activity
CUJ84_RS02030	COG0363	glucosamine-6-phosphate deaminase activity
CUJ84_RS02035	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUJ84_RS02040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS02055	COG0840	transmembrane signaling receptor activity
CUJ84_RS02055	COG2972	Histidine kinase
CUJ84_RS02060	COG0840	transmembrane signaling receptor activity
CUJ84_RS02080	COG2224	Isocitrate lyase
CUJ84_RS02095	COG3842	ATPase activity
CUJ84_RS02100	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS02105	COG1177	transmembrane transport
CUJ84_RS02115	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUJ84_RS02120	COG2205	protein histidine kinase activity
CUJ84_RS02175	COG1959	2 iron, 2 sulfur cluster binding
CUJ84_RS02180	COG0747	negative chemotaxis
CUJ84_RS02185	COG0601	transmembrane transport
CUJ84_RS02190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS02195	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS02200	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS02205	COG3265	gluconokinase activity
CUJ84_RS02210	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS02215	COG1755	Isoprenylcysteine carboxyl methyltransferase
CUJ84_RS02230	COG1595	DNA-templated transcription, initiation
CUJ84_RS02250	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CUJ84_RS02255	COG0110	maltose O-acetyltransferase activity
CUJ84_RS02260	COG2226	methyltransferase
CUJ84_RS02265	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CUJ84_RS02285	COG2226	methyltransferase
CUJ84_RS02315	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CUJ84_RS02325	COG1216	Glycosyl transferase, family 2
CUJ84_RS02345	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS02380	COG0248	Ppx GppA phosphatase
CUJ84_RS02385	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
CUJ84_RS02395	COG0477	Major facilitator Superfamily
CUJ84_RS02400	COG1234	tRNA 3'-trailer cleavage
CUJ84_RS02430	COG0583	DNA-binding transcription factor activity
CUJ84_RS02455	COG0306	phosphate transporter
CUJ84_RS02470	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CUJ84_RS02475	COG0604	alcohol dehydrogenase
CUJ84_RS02475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CUJ84_RS02475	COG4221	oxidoreductase activity
CUJ84_RS02475	COG3321	synthase
CUJ84_RS02485	COG0583	DNA-binding transcription factor activity
CUJ84_RS02490	COG0277	FAD linked oxidase domain protein
CUJ84_RS02495	COG0277	FAD linked oxidase domain protein
CUJ84_RS02500	COG0247	lactate metabolic process
CUJ84_RS02515	COG1388	LysM domain
CUJ84_RS02515	COG1376	ErfK ybiS ycfS ynhG family protein
CUJ84_RS02540	COG1376	ErfK ybiS ycfS ynhG family protein
CUJ84_RS02545	COG2818	Glycosylase
CUJ84_RS02565	COG0667	Aldo Keto reductase
CUJ84_RS02585	COG0124	histidyl-tRNA synthetase
CUJ84_RS02590	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
CUJ84_RS02595	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CUJ84_RS02600	COG2259	Doxx family
CUJ84_RS02605	COG0625	glutathione transferase activity
CUJ84_RS02615	COG0459	protein refolding
CUJ84_RS02620	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CUJ84_RS02630	COG0196	riboflavin kinase activity
CUJ84_RS02650	COG0590	tRNA wobble adenosine to inosine editing
CUJ84_RS02655	COG1187	pseudouridine synthase activity
CUJ84_RS02660	COG0742	ribosomal rna small subunit methyltransferase
CUJ84_RS02685	COG0312	modulator of DNA gyrase
CUJ84_RS02690	COG0483	inositol monophosphate 1-phosphatase activity
CUJ84_RS02700	COG1519	Transferase
CUJ84_RS02710	COG1663	tetraacyldisaccharide 4'-kinase activity
CUJ84_RS02720	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CUJ84_RS02730	COG5001	Diguanylate cyclase
CUJ84_RS02730	COG3300	MHYT domain
CUJ84_RS02740	COG3386	PFAM SMP-30 Gluconolaconase
CUJ84_RS02745	COG0800	Aldolase
CUJ84_RS02750	COG3734	2-keto-3-deoxy-galactonokinase
CUJ84_RS02755	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS02760	COG1414	Transcriptional regulator
CUJ84_RS02765	COG2197	response regulator
CUJ84_RS02770	COG0489	protein tyrosine kinase activity
CUJ84_RS02780	COG0598	Magnesium transport protein CorA
CUJ84_RS02785	COG3158	transport of potassium into the cell
CUJ84_RS02800	COG0356	it plays a direct role in the translocation of protons across the membrane
CUJ84_RS02810	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CUJ84_RS02815	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CUJ84_RS02820	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CUJ84_RS02840	COG0521	Mo-molybdopterin cofactor biosynthetic process
CUJ84_RS02845	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CUJ84_RS02855	COG0142	geranyltranstransferase activity
CUJ84_RS02870	COG1914	H( )-stimulated, divalent metal cation uptake system
CUJ84_RS02885	COG0752	glycyl-tRNA synthetase alpha subunit
CUJ84_RS02895	COG1704	LemA family
CUJ84_RS02900	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CUJ84_RS02910	COG0151	Belongs to the GarS family
CUJ84_RS02920	COG0840	transmembrane signaling receptor activity
CUJ84_RS02925	COG1683	Conserved Protein
CUJ84_RS02930	COG0751	glycine-tRNA ligase activity
CUJ84_RS02935	COG2183	response to ionizing radiation
CUJ84_RS02940	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CUJ84_RS02955	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
CUJ84_RS02975	COG0009	L-threonylcarbamoyladenylate synthase
CUJ84_RS02990	COG4638	Rieske (2fe-2S)
CUJ84_RS03005	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS03020	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CUJ84_RS03035	COG0840	transmembrane signaling receptor activity
CUJ84_RS03040	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CUJ84_RS03045	COG1741	Belongs to the pirin family
CUJ84_RS03055	COG1722	exodeoxyribonuclease VII activity
CUJ84_RS03060	COG0123	including yeast histone deacetylase and acetoin utilization protein
CUJ84_RS03075	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ84_RS03100	COG3842	ATPase activity
CUJ84_RS03110	COG0765	amino acid transport
CUJ84_RS03120	COG2186	Transcriptional regulator
CUJ84_RS03130	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUJ84_RS03145	COG0596	Alpha beta hydrolase
CUJ84_RS03155	COG1268	BioY protein
CUJ84_RS03160	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CUJ84_RS03165	COG1122	ATPase activity
CUJ84_RS03175	COG3214	Protein conserved in bacteria
CUJ84_RS03180	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CUJ84_RS03180	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CUJ84_RS03185	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CUJ84_RS03210	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CUJ84_RS03215	COG0484	heat shock protein binding
CUJ84_RS03235	COG0259	pyridoxamine-phosphate oxidase activity
CUJ84_RS03245	COG1686	Belongs to the peptidase S11 family
CUJ84_RS03265	COG0312	modulator of DNA gyrase
CUJ84_RS03275	COG1565	acr, cog1565
CUJ84_RS03275	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CUJ84_RS03280	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ84_RS03285	COG0109	protoheme IX farnesyltransferase activity
CUJ84_RS03290	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
CUJ84_RS03310	COG3346	SURF1 family
CUJ84_RS03315	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CUJ84_RS03320	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUJ84_RS03325	COG0328	RNA-DNA hybrid ribonuclease activity
CUJ84_RS03345	COG1678	Uncharacterized ACR, COG1678
CUJ84_RS03355	COG0678	peroxiredoxin activity
CUJ84_RS03355	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CUJ84_RS03400	COG2072	flavoprotein involved in K transport
CUJ84_RS03405	COG1126	abc transporter atp-binding protein
CUJ84_RS03410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS03415	COG0765	amino acid transport
CUJ84_RS03425	COG1121	(ABC) transporter
CUJ84_RS03430	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CUJ84_RS03435	COG0803	Belongs to the bacterial solute-binding protein 9 family
CUJ84_RS03465	COG0612	Peptidase, M16
CUJ84_RS03490	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ84_RS03495	COG0840	transmembrane signaling receptor activity
CUJ84_RS03495	COG2972	Histidine kinase
CUJ84_RS03545	COG2189	Belongs to the N(4) N(6)-methyltransferase family
CUJ84_RS03560	COG1194	a g-specific adenine glycosylase
CUJ84_RS03585	COG1196	nuclear chromosome segregation
CUJ84_RS03595	COG0574	Belongs to the PEP-utilizing enzyme family
CUJ84_RS03595	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CUJ84_RS03670	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS03820	COG2207	Transcriptional regulator
CUJ84_RS03925	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CUJ84_RS03935	COG0583	DNA-binding transcription factor activity
CUJ84_RS03940	COG2226	methyltransferase
CUJ84_RS03950	COG0640	Transcriptional regulator
CUJ84_RS03955	COG1917	Cupin 2, conserved barrel domain protein
CUJ84_RS03955	COG2207	Transcriptional regulator
CUJ84_RS03970	COG4221	oxidoreductase activity
CUJ84_RS03980	COG1733	regulation of RNA biosynthetic process
CUJ84_RS03985	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ84_RS04000	COG0251	oxidation-reduction process
CUJ84_RS04015	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ84_RS04025	COG0640	Transcriptional regulator
CUJ84_RS04035	COG0740	serine-type endopeptidase activity
CUJ84_RS04050	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CUJ84_RS04065	COG0259	pyridoxamine-phosphate oxidase activity
CUJ84_RS04070	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS04090	COG0640	Transcriptional regulator
CUJ84_RS04095	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS04100	COG2207	Transcriptional regulator
CUJ84_RS04105	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS04115	COG2207	Transcriptional regulator
CUJ84_RS04140	COG0702	epimerase
CUJ84_RS04165	COG0625	glutathione transferase activity
CUJ84_RS04175	COG0640	Transcriptional regulator
CUJ84_RS04225	COG1309	transcriptional regulator
CUJ84_RS04235	COG0590	tRNA wobble adenosine to inosine editing
CUJ84_RS04250	COG0235	Class ii aldolase
CUJ84_RS04260	COG4191	Histidine kinase
CUJ84_RS04260	COG0784	Response regulator, receiver
CUJ84_RS04315	COG1902	pentaerythritol trinitrate reductase activity
CUJ84_RS04330	COG0640	Transcriptional regulator
CUJ84_RS04425	COG1609	Transcriptional regulator
CUJ84_RS04430	COG0583	DNA-binding transcription factor activity
CUJ84_RS04440	COG0583	DNA-binding transcription factor activity
CUJ84_RS04460	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS04480	COG1216	Glycosyl transferase, family 2
CUJ84_RS04520	COG2895	sulfate adenylyltransferase (ATP) activity
CUJ84_RS04525	COG0175	sulfate reduction
CUJ84_RS04530	COG0175	sulfate reduction
CUJ84_RS04535	COG1959	2 iron, 2 sulfur cluster binding
CUJ84_RS04560	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CUJ84_RS04565	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS04570	COG1309	transcriptional regulator
CUJ84_RS04585	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CUJ84_RS04655	COG0583	DNA-binding transcription factor activity
CUJ84_RS04660	COG0435	Glutathione S-transferase
CUJ84_RS04675	COG0584	glycerophosphoryl diester phosphodiesterase
CUJ84_RS04680	COG0596	Alpha beta hydrolase
CUJ84_RS04695	COG1793	dna ligase
CUJ84_RS04715	COG1376	ErfK ybiS ycfS ynhG family protein
CUJ84_RS04720	COG1376	ErfK ybiS ycfS ynhG family protein
CUJ84_RS04725	COG1278	Cold shock
CUJ84_RS04735	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CUJ84_RS04745	COG1846	Transcriptional regulator
CUJ84_RS04750	COG1764	response to oxidative stress
CUJ84_RS04775	COG0488	(ABC) transporter
CUJ84_RS04785	COG0488	(ABC) transporter
CUJ84_RS04790	COG0433	COG0433 Predicted ATPase
CUJ84_RS04810	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CUJ84_RS04815	COG4106	trans-aconitate 2-methyltransferase activity
CUJ84_RS04820	COG1253	flavin adenine dinucleotide binding
CUJ84_RS04825	COG0840	transmembrane signaling receptor activity
CUJ84_RS04830	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CUJ84_RS04850	COG4689	acetoacetate decarboxylase
CUJ84_RS04855	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS04910	COG1064	alcohol dehydrogenase
CUJ84_RS04915	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS04925	COG0583	DNA-binding transcription factor activity
CUJ84_RS04950	COG0625	glutathione transferase activity
CUJ84_RS04960	COG2814	Major facilitator Superfamily
CUJ84_RS04970	COG0730	response to heat
CUJ84_RS04985	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CUJ84_RS05010	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS05020	COG2010	Cytochrome c
CUJ84_RS05055	COG4993	Dehydrogenase
CUJ84_RS05060	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
CUJ84_RS05065	COG0477	Major facilitator Superfamily
CUJ84_RS05120	COG2514	catechol 2,3-dioxygenase activity
CUJ84_RS05130	COG1272	protein, Hemolysin III
CUJ84_RS05135	COG1247	-acetyltransferase
CUJ84_RS05150	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUJ84_RS05160	COG2111	Na H antiporter
CUJ84_RS05160	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CUJ84_RS05165	COG2111	Na H antiporter
CUJ84_RS05170	COG1006	Multisubunit Na H antiporter MnhC subunit
CUJ84_RS05175	COG0651	ATP synthesis coupled electron transport
CUJ84_RS05180	COG1863	multisubunit Na H antiporter MnhE subunit
CUJ84_RS05185	COG2212	antiporter activity
CUJ84_RS05190	COG1320	monovalent cation:proton antiporter activity
CUJ84_RS05195	COG4957	zinc ion binding
CUJ84_RS05200	COG2166	iron-sulfur cluster assembly
CUJ84_RS05210	COG2205	protein histidine kinase activity
CUJ84_RS05230	COG2207	Transcriptional regulator
CUJ84_RS05240	COG0840	transmembrane signaling receptor activity
CUJ84_RS05270	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CUJ84_RS05275	COG2983	Belongs to the UPF0260 family
CUJ84_RS05285	COG4221	oxidoreductase activity
CUJ84_RS05290	COG3239	Fatty acid desaturase
CUJ84_RS05310	COG0583	DNA-binding transcription factor activity
CUJ84_RS05345	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CUJ84_RS05350	COG0459	protein refolding
CUJ84_RS05360	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS05370	COG1082	Xylose isomerase domain protein TIM barrel
CUJ84_RS05375	COG1609	Transcriptional regulator
CUJ84_RS05380	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ84_RS05395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ84_RS05425	COG1309	transcriptional regulator
CUJ84_RS05465	COG4235	cytochrome complex assembly
CUJ84_RS05470	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
CUJ84_RS05475	COG1138	Cytochrome C-type biogenesis protein
CUJ84_RS05480	COG3088	subunit of a heme lyase
CUJ84_RS05485	COG1917	Cupin 2, conserved barrel domain protein
CUJ84_RS05495	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ84_RS05500	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS05510	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
CUJ84_RS05520	COG2202	Pas domain
CUJ84_RS05520	COG2205	protein histidine kinase activity
CUJ84_RS05525	COG0308	aminopeptidase N
CUJ84_RS05530	COG0840	transmembrane signaling receptor activity
CUJ84_RS05530	COG3290	protein histidine kinase activity
CUJ84_RS05560	COG0443	Heat shock 70 kDa protein
CUJ84_RS05580	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS05590	COG1376	ErfK ybiS ycfS ynhG family protein
CUJ84_RS05605	COG2239	Acts as a magnesium transporter
CUJ84_RS05615	COG1733	regulation of RNA biosynthetic process
CUJ84_RS05620	COG2814	Major facilitator Superfamily
CUJ84_RS05630	COG0174	glutamine synthetase
CUJ84_RS05645	COG3609	addiction module antidote protein, CC2985 family
CUJ84_RS05650	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CUJ84_RS05655	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CUJ84_RS05660	COG0463	Glycosyl transferase, family 2
CUJ84_RS05665	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CUJ84_RS05675	COG4941	Belongs to the sigma-70 factor family
CUJ84_RS05685	COG3795	YCII-related domain
CUJ84_RS05690	COG3795	YCII-related domain
CUJ84_RS05700	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CUJ84_RS05720	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CUJ84_RS05780	COG3718	enzyme involved in inositol metabolism
CUJ84_RS05795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS05805	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS05835	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS05840	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CUJ84_RS05850	COG1758	RNA polymerase activity
CUJ84_RS05870	COG0736	holo-[acyl-carrier-protein] synthase activity
CUJ84_RS05875	COG0681	Belongs to the peptidase S26 family
CUJ84_RS05880	COG0571	ribonuclease III activity
CUJ84_RS05885	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CUJ84_RS05890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CUJ84_RS05900	COG1381	Involved in DNA repair and RecF pathway recombination
CUJ84_RS05905	COG0656	L-ascorbic acid biosynthetic process
CUJ84_RS05915	COG1418	mRNA catabolic process
CUJ84_RS05920	COG5001	Diguanylate cyclase
CUJ84_RS05920	COG3300	MHYT domain
CUJ84_RS05930	COG2032	superoxide dismutase activity
CUJ84_RS05935	COG0668	transmembrane transport
CUJ84_RS05945	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
CUJ84_RS05975	COG1742	UPF0060 membrane protein
CUJ84_RS05985	COG1183	phosphatidylcholine synthase activity
CUJ84_RS05990	COG0688	phosphatidylethanolamine metabolic process
CUJ84_RS05995	COG5265	(ABC) transporter
CUJ84_RS06015	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ84_RS06040	COG0215	cysteine-tRNA ligase activity
CUJ84_RS06055	COG4221	oxidoreductase activity
CUJ84_RS06060	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CUJ84_RS06065	COG1286	toxin biosynthetic process
CUJ84_RS06075	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS06085	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CUJ84_RS06090	COG0305	Participates in initiation and elongation during chromosome replication
CUJ84_RS06095	COG0359	binds to the 23S rRNA
CUJ84_RS06105	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CUJ84_RS06110	COG0360	Binds together with S18 to 16S ribosomal RNA
CUJ84_RS06115	COG0667	Aldo Keto reductase
CUJ84_RS06125	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CUJ84_RS06135	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CUJ84_RS06140	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUJ84_RS06145	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CUJ84_RS06150	COG1561	YicC-like family, N-terminal region
CUJ84_RS06155	COG0194	GDP metabolic process
CUJ84_RS06160	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CUJ84_RS06165	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CUJ84_RS06175	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CUJ84_RS06190	COG0671	phosphoesterase, PA-phosphatase related
CUJ84_RS06195	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CUJ84_RS06215	COG1505	serine-type exopeptidase activity
CUJ84_RS06225	COG0488	(ABC) transporter
CUJ84_RS06245	COG0105	UTP biosynthetic process
CUJ84_RS06265	COG0314	molybdopterin synthase activity
CUJ84_RS06280	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CUJ84_RS06285	COG0322	excinuclease ABC activity
CUJ84_RS06290	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS06305	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CUJ84_RS06310	COG0243	molybdopterin cofactor binding
CUJ84_RS06330	COG3454	Phosphonate metabolism
CUJ84_RS06335	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CUJ84_RS06340	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CUJ84_RS06345	COG0628	permease
CUJ84_RS06355	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CUJ84_RS06370	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CUJ84_RS06375	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CUJ84_RS06380	COG2132	Multicopper oxidase
CUJ84_RS06390	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CUJ84_RS06400	COG1309	transcriptional regulator
CUJ84_RS06410	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CUJ84_RS06420	COG3654	unkown
CUJ84_RS06425	COG2336	PFAM SpoVT AbrB
CUJ84_RS06435	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
CUJ84_RS06445	COG0113	porphobilinogen synthase activity
CUJ84_RS06465	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CUJ84_RS06470	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CUJ84_RS06475	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUJ84_RS06475	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CUJ84_RS06485	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CUJ84_RS06490	COG1091	dTDP-4-dehydrorhamnose reductase activity
CUJ84_RS06495	COG1088	dTDP-glucose 4,6-dehydratase activity
CUJ84_RS06500	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
CUJ84_RS06515	COG0519	Catalyzes the synthesis of GMP from XMP
CUJ84_RS06530	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CUJ84_RS06535	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CUJ84_RS06540	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
CUJ84_RS06560	COG0416	fatty acid biosynthetic process
CUJ84_RS06565	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CUJ84_RS06570	COG0776	regulation of translation
CUJ84_RS06610	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CUJ84_RS06620	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ84_RS06630	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CUJ84_RS06655	COG1940	carbohydrate kinase activity
CUJ84_RS06670	COG1175	transmembrane transport
CUJ84_RS06675	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS06690	COG0297	glycogen (starch) synthase activity
CUJ84_RS06715	COG1612	heme a metabolic process
CUJ84_RS06725	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CUJ84_RS06730	COG0010	Belongs to the arginase family
CUJ84_RS06740	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CUJ84_RS06745	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CUJ84_RS06760	COG1024	Enoyl-CoA hydratase
CUJ84_RS06775	COG1832	CoA-binding protein
CUJ84_RS06790	COG5001	Diguanylate cyclase
CUJ84_RS06800	COG2124	cytochrome p450
CUJ84_RS06805	COG3706	GGDEF domain
CUJ84_RS06810	COG0740	serine-type endopeptidase activity
CUJ84_RS06815	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CUJ84_RS06820	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CUJ84_RS06825	COG0776	regulation of translation
CUJ84_RS06830	COG0697	spore germination
CUJ84_RS06840	COG0667	Aldo Keto reductase
CUJ84_RS06860	COG0386	Belongs to the glutathione peroxidase family
CUJ84_RS06890	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ84_RS06895	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ84_RS06900	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ84_RS06910	COG0649	NAD binding
CUJ84_RS06920	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CUJ84_RS06925	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CUJ84_RS06930	COG3743	rRNA binding
CUJ84_RS06930	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CUJ84_RS06940	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CUJ84_RS06945	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CUJ84_RS06955	COG0713	ATP synthesis coupled electron transport
CUJ84_RS06970	COG1007	ATP synthesis coupled electron transport
CUJ84_RS06975	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CUJ84_RS06975	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CUJ84_RS06985	COG0346	lactoylglutathione lyase activity
CUJ84_RS06995	COG0442	prolyl-tRNA aminoacylation
CUJ84_RS07005	COG1136	(ABC) transporter
CUJ84_RS07025	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CUJ84_RS07045	COG0784	Response regulator, receiver
CUJ84_RS07055	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CUJ84_RS07060	COG0477	Major facilitator Superfamily
CUJ84_RS07070	COG0557	exoribonuclease II activity
CUJ84_RS07075	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CUJ84_RS07080	COG0758	DNA mediated transformation
CUJ84_RS07085	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CUJ84_RS07095	COG0540	Belongs to the ATCase OTCase family
CUJ84_RS07100	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS07110	COG1530	ribonuclease E activity
CUJ84_RS07115	COG0860	N-Acetylmuramoyl-L-alanine amidase
CUJ84_RS07120	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CUJ84_RS07140	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CUJ84_RS07160	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CUJ84_RS07175	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CUJ84_RS07180	COG1086	Polysaccharide biosynthesis protein
CUJ84_RS07190	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CUJ84_RS07200	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CUJ84_RS07205	COG0081	regulation of translation
CUJ84_RS07210	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CUJ84_RS07215	COG0222	ribosome binding
CUJ84_RS07220	COG0085	RNA polymerase activity
CUJ84_RS07225	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CUJ84_RS07235	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CUJ84_RS07240	COG0049	tRNA binding
CUJ84_RS07245	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CUJ84_RS07250	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CUJ84_RS07255	COG0051	transcription antitermination factor activity, RNA binding
CUJ84_RS07260	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CUJ84_RS07265	COG0088	Forms part of the polypeptide exit tunnel
CUJ84_RS07270	COG0089	rRNA binding
CUJ84_RS07275	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CUJ84_RS07280	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CUJ84_RS07285	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CUJ84_RS07290	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CUJ84_RS07295	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CUJ84_RS07300	COG0255	Belongs to the universal ribosomal protein uL29 family
CUJ84_RS07305	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CUJ84_RS07310	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CUJ84_RS07315	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CUJ84_RS07320	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CUJ84_RS07325	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CUJ84_RS07330	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CUJ84_RS07335	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CUJ84_RS07340	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CUJ84_RS07345	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CUJ84_RS07350	COG1841	ribosomal large subunit assembly
CUJ84_RS07355	COG0200	Binds to the 23S rRNA
CUJ84_RS07365	COG0563	adenylate kinase activity
CUJ84_RS07370	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CUJ84_RS07375	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CUJ84_RS07380	COG0202	RNA polymerase activity
CUJ84_RS07385	COG0203	ribosomal protein L17
CUJ84_RS07395	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
CUJ84_RS07400	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ84_RS07405	COG0129	dihydroxy-acid dehydratase activity
CUJ84_RS07420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ84_RS07425	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CUJ84_RS07435	COG0596	Alpha beta hydrolase
CUJ84_RS07435	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUJ84_RS07440	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CUJ84_RS07445	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS07450	COG0583	DNA-binding transcription factor activity
CUJ84_RS07465	COG5002	protein histidine kinase activity
CUJ84_RS07475	COG1609	Transcriptional regulator
CUJ84_RS07485	COG1024	Enoyl-CoA hydratase
CUJ84_RS07490	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS07495	COG1653	transport
CUJ84_RS07500	COG1175	transmembrane transport
CUJ84_RS07505	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS07510	COG3842	ATPase activity
CUJ84_RS07525	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS07530	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CUJ84_RS07555	COG2197	response regulator
CUJ84_RS07610	COG1522	sequence-specific DNA binding
CUJ84_RS07615	COG1522	sequence-specific DNA binding
CUJ84_RS07625	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
CUJ84_RS07635	COG0625	glutathione transferase activity
CUJ84_RS07655	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CUJ84_RS07665	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
CUJ84_RS07675	COG1058	Belongs to the CinA family
CUJ84_RS07675	COG1546	Belongs to the CinA family
CUJ84_RS07680	COG0655	NAD(P)H dehydrogenase (quinone) activity
CUJ84_RS07695	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CUJ84_RS07705	COG3706	GGDEF domain
CUJ84_RS07715	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS07725	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CUJ84_RS07730	COG0583	DNA-binding transcription factor activity
CUJ84_RS07735	COG0737	Belongs to the 5'-nucleotidase family
CUJ84_RS07750	COG1522	sequence-specific DNA binding
CUJ84_RS07755	COG0686	Belongs to the AlaDH PNT family
CUJ84_RS07775	COG2897	thiosulfate sulfurtransferase activity
CUJ84_RS07790	COG3806	Anti-sigma factor
CUJ84_RS07795	COG0300	oxidoreductase activity
CUJ84_RS07800	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CUJ84_RS07820	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ84_RS07825	COG0243	molybdopterin cofactor binding
CUJ84_RS07835	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CUJ84_RS07845	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS07850	COG3707	response regulator
CUJ84_RS07855	COG0625	glutathione transferase activity
CUJ84_RS07865	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS07870	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS07875	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CUJ84_RS07875	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CUJ84_RS07880	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CUJ84_RS07890	COG0450	alkyl hydroperoxide reductase
CUJ84_RS07895	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CUJ84_RS07925	COG3842	ATPase activity
CUJ84_RS07930	COG1177	transmembrane transport
CUJ84_RS07935	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS07945	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CUJ84_RS07960	COG0753	catalase activity
CUJ84_RS08040	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ84_RS08050	COG0525	valine-tRNA ligase activity
CUJ84_RS08075	COG0316	Belongs to the HesB IscA family
CUJ84_RS08080	COG0232	Belongs to the dGTPase family. Type 2 subfamily
CUJ84_RS08085	COG0018	arginyl-trna synthetase
CUJ84_RS08095	COG1472	Belongs to the glycosyl hydrolase 3 family
CUJ84_RS08100	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CUJ84_RS08105	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CUJ84_RS08110	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CUJ84_RS08115	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CUJ84_RS08120	COG0805	protein transport
CUJ84_RS08125	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CUJ84_RS08130	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CUJ84_RS08135	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ84_RS08150	COG1862	Preprotein translocase
CUJ84_RS08175	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CUJ84_RS08205	COG0544	peptidyl-prolyl cis-trans isomerase activity
CUJ84_RS08215	COG1032	radical SAM domain protein
CUJ84_RS08230	COG2003	Belongs to the UPF0758 family
CUJ84_RS08235	COG0024	Methionine aminopeptidase
CUJ84_RS08250	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CUJ84_RS08260	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CUJ84_RS08265	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CUJ84_RS08270	COG0154	amidase activity
CUJ84_RS08285	COG3811	Belongs to the UPF0386 family
CUJ84_RS08300	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CUJ84_RS08325	COG4765	Protein conserved in bacteria
CUJ84_RS08335	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CUJ84_RS08345	COG0511	ligase activity, forming carbon-carbon bonds
CUJ84_RS08350	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CUJ84_RS08360	COG0436	Aminotransferase
CUJ84_RS08370	COG3243	poly(R)-hydroxyalkanoic acid synthase
CUJ84_RS08380	COG0436	Aminotransferase
CUJ84_RS08395	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CUJ84_RS08435	COG1278	Cold shock
CUJ84_RS08485	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
CUJ84_RS08525	COG1126	abc transporter atp-binding protein
CUJ84_RS08530	COG0765	amino acid transport
CUJ84_RS08535	COG4597	amino acid ABC transporter
CUJ84_RS08540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS08545	COG0626	cystathionine gamma-synthase activity
CUJ84_RS08560	COG2267	carboxylic ester hydrolase activity
CUJ84_RS08580	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CUJ84_RS08595	COG0537	adenosine 5'-monophosphoramidase activity
CUJ84_RS08640	COG0052	Belongs to the universal ribosomal protein uS2 family
CUJ84_RS08645	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CUJ84_RS08650	COG0528	UMP kinase activity
CUJ84_RS08655	COG0233	cytoplasmic translational termination
CUJ84_RS08660	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CUJ84_RS08670	COG0750	zinc metalloprotease
CUJ84_RS08675	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CUJ84_RS08680	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ84_RS08685	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CUJ84_RS08690	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ84_RS08695	COG3494	Protein of unknown function (DUF1009)
CUJ84_RS08700	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CUJ84_RS08715	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CUJ84_RS08740	COG2877	3-deoxy-8-phosphooctulonate synthase activity
CUJ84_RS08745	COG0148	phosphopyruvate hydratase activity
CUJ84_RS08755	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CUJ84_RS08760	COG0022	dehydrogenase e1 component
CUJ84_RS08760	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUJ84_RS08765	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUJ84_RS08780	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CUJ84_RS08795	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
CUJ84_RS08810	COG2867	negative regulation of translational initiation
CUJ84_RS08815	COG1058	Belongs to the CinA family
CUJ84_RS08815	COG1546	Belongs to the CinA family
CUJ84_RS08820	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CUJ84_RS08820	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CUJ84_RS08835	COG2204	response regulator
CUJ84_RS08840	COG0667	Aldo Keto reductase
CUJ84_RS08845	COG5000	phosphorelay sensor kinase activity
CUJ84_RS08850	COG2204	response regulator
CUJ84_RS08855	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS08860	COG1923	regulation of RNA biosynthetic process
CUJ84_RS08865	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CUJ84_RS08875	COG3956	TIGRFAM MazG family protein
CUJ84_RS08885	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
CUJ84_RS08885	COG1648	precorrin-2 dehydrogenase activity
CUJ84_RS08905	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ84_RS08910	COG0679	Auxin Efflux Carrier
CUJ84_RS08915	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS08920	COG0785	Cytochrome C biogenesis protein
CUJ84_RS08930	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS08950	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ84_RS08980	COG3237	CsbD-like
CUJ84_RS08990	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ84_RS09075	COG1653	transport
CUJ84_RS09080	COG1175	transmembrane transport
CUJ84_RS09085	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS09090	COG3842	ATPase activity
CUJ84_RS09120	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS09130	COG2186	Transcriptional regulator
CUJ84_RS09140	COG0601	transmembrane transport
CUJ84_RS09145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS09150	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS09155	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS09160	COG1609	Transcriptional regulator
CUJ84_RS09175	COG1175	transmembrane transport
CUJ84_RS09180	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS09190	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ84_RS09210	COG0655	NAD(P)H dehydrogenase (quinone) activity
CUJ84_RS09215	COG0583	DNA-binding transcription factor activity
CUJ84_RS09230	COG0667	Aldo Keto reductase
CUJ84_RS09240	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
CUJ84_RS09260	COG4372	Transposase
CUJ84_RS09270	COG2963	transposase activity
CUJ84_RS09310	COG3038	cytochrome b561
CUJ84_RS09340	COG1566	PFAM secretion protein HlyD family protein
CUJ84_RS09345	COG1136	(ABC) transporter
CUJ84_RS09345	COG0577	efflux transmembrane transporter activity
CUJ84_RS09350	COG1136	(ABC) transporter
CUJ84_RS09350	COG0577	efflux transmembrane transporter activity
CUJ84_RS09370	COG1183	phosphatidylcholine synthase activity
CUJ84_RS09380	COG3845	ABC transporter
CUJ84_RS09390	COG1079	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS09400	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS09410	COG1129	ABC transporter
CUJ84_RS09415	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS09420	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS09425	COG2186	Transcriptional regulator
CUJ84_RS09430	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CUJ84_RS09435	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ84_RS09445	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CUJ84_RS09455	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CUJ84_RS09470	COG4166	transmembrane transport
CUJ84_RS09485	COG0174	glutamine synthetase
CUJ84_RS09490	COG0347	Belongs to the P(II) protein family
CUJ84_RS09495	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CUJ84_RS09495	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CUJ84_RS09500	COG2354	Protein conserved in bacteria
CUJ84_RS09515	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CUJ84_RS09520	COG0629	single-stranded DNA binding
CUJ84_RS09530	COG2095	MarC family integral membrane protein
CUJ84_RS09535	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CUJ84_RS09545	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CUJ84_RS09560	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CUJ84_RS09565	COG0343	queuine tRNA-ribosyltransferase activity
CUJ84_RS09590	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUJ84_RS09635	COG3842	ATPase activity
CUJ84_RS09640	COG1175	transmembrane transport
CUJ84_RS09655	COG1609	Transcriptional regulator
CUJ84_RS09660	COG0612	Peptidase, M16
CUJ84_RS09685	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CUJ84_RS09715	COG0028	Belongs to the TPP enzyme family
CUJ84_RS09730	COG1129	ABC transporter
CUJ84_RS09735	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS09740	COG2826	transposase and inactivated derivatives, IS30 family
CUJ84_RS09750	COG0668	transmembrane transport
CUJ84_RS09755	COG0596	Alpha beta hydrolase
CUJ84_RS09770	COG0583	DNA-binding transcription factor activity
CUJ84_RS09780	COG1984	allophanate hydrolase subunit 2
CUJ84_RS09790	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CUJ84_RS09805	COG3174	membrane
CUJ84_RS09820	COG0861	Integral membrane protein TerC family
CUJ84_RS09825	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CUJ84_RS09825	COG0321	lipoyl(octanoyl) transferase activity
CUJ84_RS09830	COG0084	hydrolase, TatD family'
CUJ84_RS09835	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUJ84_RS09840	COG0730	response to heat
CUJ84_RS09855	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CUJ84_RS09900	COG2824	Alkylphosphonate utilization operon protein PhnA
CUJ84_RS09940	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CUJ84_RS09945	COG0134	indole-3-glycerol-phosphate synthase activity
CUJ84_RS09950	COG0315	cyclic pyranopterin monophosphate synthase activity
CUJ84_RS09955	COG0303	'Molybdopterin
CUJ84_RS09990	COG1902	pentaerythritol trinitrate reductase activity
CUJ84_RS09995	COG4221	oxidoreductase activity
CUJ84_RS10005	COG0513	Belongs to the DEAD box helicase family
CUJ84_RS10020	COG0372	Belongs to the citrate synthase family
CUJ84_RS10025	COG0372	Belongs to the citrate synthase family
CUJ84_RS10035	COG0504	CTP synthase activity
CUJ84_RS10045	COG0149	triose-phosphate isomerase activity
CUJ84_RS10055	COG0187	DNA topoisomerase II activity
CUJ84_RS10065	COG0628	permease
CUJ84_RS10100	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CUJ84_RS10115	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CUJ84_RS10125	COG0302	gtp cyclohydrolase
CUJ84_RS10130	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CUJ84_RS10135	COG1752	Esterase of the alpha-beta hydrolase superfamily
CUJ84_RS10170	COG2267	carboxylic ester hydrolase activity
CUJ84_RS10185	COG1686	Belongs to the peptidase S11 family
CUJ84_RS10200	COG1760	l-serine dehydratase
CUJ84_RS10210	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CUJ84_RS10210	COG2755	lipolytic protein G-D-S-L family
CUJ84_RS10215	COG1069	ribulokinase activity
CUJ84_RS10225	COG4214	carbohydrate transport
CUJ84_RS10265	COG2239	Acts as a magnesium transporter
CUJ84_RS10270	COG0242	peptide deformylase activity
CUJ84_RS10290	COG0321	lipoyl(octanoyl) transferase activity
CUJ84_RS10310	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ84_RS10330	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ84_RS10395	COG0114	fumarate hydratase activity
CUJ84_RS10410	COG0281	malic enzyme
CUJ84_RS10415	COG1252	NADH dehydrogenase
CUJ84_RS10420	COG0028	Belongs to the TPP enzyme family
CUJ84_RS10425	COG1271	oxidase subunit
CUJ84_RS10430	COG1294	oxidase, subunit
CUJ84_RS10455	COG4566	intracellular signal transduction
CUJ84_RS10460	COG4566	intracellular signal transduction
CUJ84_RS10465	COG1275	C4-dicarboxylate transporter malic acid transport protein
CUJ84_RS10490	COG0656	L-ascorbic acid biosynthetic process
CUJ84_RS10500	COG0028	Belongs to the TPP enzyme family
CUJ84_RS10515	COG0640	Transcriptional regulator
CUJ84_RS10535	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS10540	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS10540	COG2205	protein histidine kinase activity
CUJ84_RS10540	COG4191	Histidine kinase
CUJ84_RS10565	COG2267	carboxylic ester hydrolase activity
CUJ84_RS10610	COG1942	4-Oxalocrotonate Tautomerase
CUJ84_RS10620	COG0583	DNA-binding transcription factor activity
CUJ84_RS10625	COG0596	Alpha beta hydrolase
CUJ84_RS10650	COG4191	Histidine kinase
CUJ84_RS10655	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS10675	COG4191	Histidine kinase
CUJ84_RS10695	COG0596	Alpha beta hydrolase
CUJ84_RS10700	COG4566	intracellular signal transduction
CUJ84_RS10730	COG4566	intracellular signal transduction
CUJ84_RS10735	COG4191	Histidine kinase
CUJ84_RS10855	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ84_RS10915	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
CUJ84_RS10960	COG4770	biotin carboxylase activity
CUJ84_RS10965	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CUJ84_RS10975	COG1671	Belongs to the UPF0178 family
CUJ84_RS10985	COG2259	Doxx family
CUJ84_RS10990	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CUJ84_RS11005	COG0546	phosphoglycolate phosphatase activity
CUJ84_RS11010	COG0564	pseudouridine synthase activity
CUJ84_RS11015	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CUJ84_RS11040	COG0509	glycine decarboxylation via glycine cleavage system
CUJ84_RS11045	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CUJ84_RS11045	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
CUJ84_RS11070	COG0243	molybdopterin cofactor binding
CUJ84_RS11075	COG0783	Belongs to the Dps family
CUJ84_RS11090	COG0316	Belongs to the HesB IscA family
CUJ84_RS11095	COG2151	metal-sulfur cluster biosynthetic enzyme
CUJ84_RS11100	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CUJ84_RS11105	COG0719	Fe-S assembly protein
CUJ84_RS11110	COG0396	ATPase activity
CUJ84_RS11120	COG0719	Fe-S assembly protein
CUJ84_RS11125	COG1104	cysteine desulfurase activity
CUJ84_RS11130	COG2945	thiolester hydrolase activity
CUJ84_RS11145	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
CUJ84_RS11150	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CUJ84_RS11165	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CUJ84_RS11170	COG2833	Protein of unknown function (DUF455)
CUJ84_RS11175	COG1196	nuclear chromosome segregation
CUJ84_RS11175	COG0741	lytic transglycosylase activity
CUJ84_RS11175	COG0739	heme binding
CUJ84_RS11180	COG0513	Belongs to the DEAD box helicase family
CUJ84_RS11195	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ84_RS11220	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CUJ84_RS11250	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CUJ84_RS11255	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CUJ84_RS11260	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
CUJ84_RS11265	COG0047	phosphoribosylformylglycinamidine synthase activity
CUJ84_RS11280	COG2186	Transcriptional regulator
CUJ84_RS11290	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CUJ84_RS11315	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CUJ84_RS11320	COG2814	Major facilitator Superfamily
CUJ84_RS11325	COG2814	Major facilitator Superfamily
CUJ84_RS11335	COG0483	inositol monophosphate 1-phosphatase activity
CUJ84_RS11340	COG0483	inositol monophosphate 1-phosphatase activity
CUJ84_RS11345	COG0037	tRNA processing
CUJ84_RS11350	COG2066	Belongs to the glutaminase family
CUJ84_RS11355	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CUJ84_RS11365	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CUJ84_RS11370	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CUJ84_RS11385	COG0538	isocitrate dehydrogenase activity
CUJ84_RS11390	COG0456	acetyltransferase
CUJ84_RS11405	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS11410	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CUJ84_RS11415	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CUJ84_RS11425	COG2313	pseudouridylate synthase activity
CUJ84_RS11465	COG3106	COG3106 Predicted ATPase
CUJ84_RS11470	COG3768	UPF0283 membrane protein
CUJ84_RS11480	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CUJ84_RS11490	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CUJ84_RS11500	COG0633	Ferredoxin
CUJ84_RS11525	COG1686	Belongs to the peptidase S11 family
CUJ84_RS11545	COG1127	ABC transporter
CUJ84_RS11555	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ84_RS11560	COG2814	Major facilitator Superfamily
CUJ84_RS11580	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ84_RS11585	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS11590	COG1309	transcriptional regulator
CUJ84_RS11605	COG0280	phosphate acetyltransferase
CUJ84_RS11605	COG0281	malic enzyme
CUJ84_RS11615	COG0328	RNA-DNA hybrid ribonuclease activity
CUJ84_RS11630	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS11645	COG4974	Belongs to the 'phage' integrase family
CUJ84_RS11650	COG0582	viral genome integration into host DNA
CUJ84_RS11655	COG4974	Belongs to the 'phage' integrase family
CUJ84_RS11660	COG0778	Nitroreductase
CUJ84_RS11665	COG0477	Major facilitator Superfamily
CUJ84_RS11670	COG0840	transmembrane signaling receptor activity
CUJ84_RS11685	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CUJ84_RS11695	COG0823	Involved in the tonB-independent uptake of proteins
CUJ84_RS11725	COG1132	(ABC) transporter
CUJ84_RS11730	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CUJ84_RS11755	COG1254	Belongs to the acylphosphatase family
CUJ84_RS11765	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CUJ84_RS11770	COG0546	phosphoglycolate phosphatase activity
CUJ84_RS11775	COG2989	Protein conserved in bacteria
CUJ84_RS11780	COG0114	fumarate hydratase activity
CUJ84_RS11790	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CUJ84_RS11790	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CUJ84_RS11830	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CUJ84_RS11835	COG2226	methyltransferase
CUJ84_RS11845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUJ84_RS11850	COG1120	ATPase activity
CUJ84_RS11855	COG2390	Transcriptional regulator
CUJ84_RS11860	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CUJ84_RS11865	COG3958	Transketolase
CUJ84_RS11870	COG3959	Transketolase, thiamine diphosphate binding domain
CUJ84_RS11875	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS11880	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS11885	COG1129	ABC transporter
CUJ84_RS11890	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS11900	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS11905	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CUJ84_RS11910	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS11920	COG0746	molybdenum cofactor guanylyltransferase activity
CUJ84_RS11925	COG1763	Mo-molybdopterin cofactor biosynthetic process
CUJ84_RS11930	COG4191	Histidine kinase
CUJ84_RS11930	COG0784	Response regulator, receiver
CUJ84_RS11935	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
CUJ84_RS11950	COG0667	Aldo Keto reductase
CUJ84_RS11965	COG1764	response to oxidative stress
CUJ84_RS12000	COG1349	DNA-binding transcription factor activity
CUJ84_RS12005	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CUJ84_RS12010	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS12020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS12035	COG5425	PFAM Usg family protein
CUJ84_RS12050	COG0625	glutathione transferase activity
CUJ84_RS12055	COG0640	Transcriptional regulator
CUJ84_RS12090	COG1116	anion transmembrane transporter activity
CUJ84_RS12095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS12100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS12110	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS12120	COG2084	Dehydrogenase
CUJ84_RS12130	COG0583	DNA-binding transcription factor activity
CUJ84_RS12145	COG1522	sequence-specific DNA binding
CUJ84_RS12150	COG1573	uracil-dna glycosylase
CUJ84_RS12160	COG2205	protein histidine kinase activity
CUJ84_RS12160	COG2202	Pas domain
CUJ84_RS12170	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
CUJ84_RS12175	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
CUJ84_RS12200	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS12215	COG0842	Transport permease protein
CUJ84_RS12220	COG1131	(ABC) transporter
CUJ84_RS12225	COG3507	Belongs to the glycosyl hydrolase 43 family
CUJ84_RS12230	COG0667	Aldo Keto reductase
CUJ84_RS12255	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS12260	COG1175	transmembrane transport
CUJ84_RS12275	COG0495	leucyl-tRNA aminoacylation
CUJ84_RS12280	COG0583	DNA-binding transcription factor activity
CUJ84_RS12310	COG3153	acetyltransferase
CUJ84_RS12320	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CUJ84_RS12355	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CUJ84_RS12365	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CUJ84_RS12370	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CUJ84_RS12485	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS12490	COG1492	cobalamin metabolic process
CUJ84_RS12510	COG0583	DNA-binding transcription factor activity
CUJ84_RS12525	COG0583	DNA-binding transcription factor activity
CUJ84_RS12535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CUJ84_RS12565	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS12575	COG1566	PFAM secretion protein HlyD family protein
CUJ84_RS12595	COG0668	transmembrane transport
CUJ84_RS12625	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS12655	COG0640	Transcriptional regulator
CUJ84_RS12670	COG0431	NADPH-dependent FMN reductase
CUJ84_RS12685	COG3264	Mechanosensitive ion channel
CUJ84_RS12685	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
CUJ84_RS12695	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS12700	COG2814	Major facilitator Superfamily
CUJ84_RS12715	COG1175	transmembrane transport
CUJ84_RS12720	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS12735	COG3842	ATPase activity
CUJ84_RS12745	COG1461	Dihydroxyacetone kinase
CUJ84_RS12750	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CUJ84_RS12770	COG2376	Dihydroxyacetone kinase
CUJ84_RS12785	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUJ84_RS12795	COG0596	Alpha beta hydrolase
CUJ84_RS12810	COG2186	Transcriptional regulator
CUJ84_RS12830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS12835	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CUJ84_RS12840	COG0765	amino acid transport
CUJ84_RS12850	COG1126	abc transporter atp-binding protein
CUJ84_RS12860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS12870	COG1846	Transcriptional regulator
CUJ84_RS12875	COG0596	Alpha beta hydrolase
CUJ84_RS12880	COG0494	nUDIX hydrolase
CUJ84_RS12890	COG1764	response to oxidative stress
CUJ84_RS12920	COG1607	acyl-coa hydrolase
CUJ84_RS12960	COG0667	Aldo Keto reductase
CUJ84_RS12985	COG2814	Major facilitator Superfamily
CUJ84_RS13005	COG4221	oxidoreductase activity
CUJ84_RS13010	COG0702	epimerase
CUJ84_RS13015	COG0583	DNA-binding transcription factor activity
CUJ84_RS13020	COG0659	secondary active sulfate transmembrane transporter activity
CUJ84_RS13095	COG3387	PFAM Glycoside hydrolase 15-related
CUJ84_RS13110	COG0556	nucleotide-excision repair
CUJ84_RS13115	COG0456	acetyltransferase
CUJ84_RS13130	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CUJ84_RS13135	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CUJ84_RS13175	COG3850	Histidine kinase
CUJ84_RS13175	COG5002	protein histidine kinase activity
CUJ84_RS13185	COG0431	NADPH-dependent FMN reductase
CUJ84_RS13190	COG0842	Transport permease protein
CUJ84_RS13190	COG1129	ABC transporter
CUJ84_RS13235	COG0667	Aldo Keto reductase
CUJ84_RS13260	COG0137	argininosuccinate synthase activity
CUJ84_RS13300	COG1132	(ABC) transporter
CUJ84_RS13315	COG0406	alpha-ribazole phosphatase activity
CUJ84_RS13335	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CUJ84_RS13375	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CUJ84_RS13390	COG0738	Major facilitator superfamily
CUJ84_RS13400	COG2814	Major facilitator Superfamily
CUJ84_RS13405	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CUJ84_RS13410	COG3158	transport of potassium into the cell
CUJ84_RS13415	COG0025	NhaP-type Na H and K H
CUJ84_RS13445	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ84_RS13450	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CUJ84_RS13495	COG1136	(ABC) transporter
CUJ84_RS13495	COG0577	efflux transmembrane transporter activity
CUJ84_RS13505	COG1917	Cupin 2, conserved barrel domain protein
CUJ84_RS13505	COG2207	Transcriptional regulator
CUJ84_RS13550	COG1845	cytochrome c oxidase, subunit III
CUJ84_RS13555	COG1845	cytochrome c oxidase, subunit III
CUJ84_RS13560	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ84_RS13565	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CUJ84_RS13595	COG1120	ATPase activity
CUJ84_RS13600	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUJ84_RS13615	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS13615	COG3453	Protein conserved in bacteria
CUJ84_RS13625	COG2207	Transcriptional regulator
CUJ84_RS13635	COG2201	protein-glutamate methylesterase activity
CUJ84_RS13655	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ84_RS13660	COG0667	Aldo Keto reductase
CUJ84_RS13695	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CUJ84_RS13775	COG0662	Cupin 2, conserved barrel domain protein
CUJ84_RS13780	COG0583	DNA-binding transcription factor activity
CUJ84_RS13785	COG5001	Diguanylate cyclase
CUJ84_RS13785	COG3300	MHYT domain
CUJ84_RS13795	COG2226	methyltransferase
CUJ84_RS13800	COG2208	phosphoserine phosphatase activity
CUJ84_RS13830	COG0501	Belongs to the peptidase M48B family
CUJ84_RS13860	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS13875	COG1940	carbohydrate kinase activity
CUJ84_RS13875	COG1846	Transcriptional regulator
CUJ84_RS13905	COG0697	spore germination
CUJ84_RS13910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ84_RS13920	COG2204	response regulator
CUJ84_RS13925	COG5002	protein histidine kinase activity
CUJ84_RS13930	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUJ84_RS13965	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
CUJ84_RS13970	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS13980	COG0628	permease
CUJ84_RS14010	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CUJ84_RS14140	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CUJ84_RS14145	COG1121	(ABC) transporter
CUJ84_RS14155	COG0523	cobalamin synthesis protein
CUJ84_RS14175	COG1253	flavin adenine dinucleotide binding
CUJ84_RS14210	COG0384	phenazine biosynthesis protein PhzF
CUJ84_RS14230	COG3842	ATPase activity
CUJ84_RS14235	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS14250	COG0667	Aldo Keto reductase
CUJ84_RS14255	COG5634	Uncharacterized conserved protein (DUF2278)
CUJ84_RS14260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ84_RS14265	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS14290	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CUJ84_RS14315	COG0463	Glycosyl transferase, family 2
CUJ84_RS14320	COG2207	Transcriptional regulator
CUJ84_RS14325	COG1064	alcohol dehydrogenase
CUJ84_RS14340	COG1252	NADH dehydrogenase
CUJ84_RS14345	COG1522	sequence-specific DNA binding
CUJ84_RS14350	COG1794	racemase activity, acting on amino acids and derivatives
CUJ84_RS14355	COG1846	Transcriptional regulator
CUJ84_RS14355	COG0456	acetyltransferase
CUJ84_RS14360	COG1309	transcriptional regulator
CUJ84_RS14365	COG2814	Major facilitator Superfamily
CUJ84_RS14375	COG1733	regulation of RNA biosynthetic process
CUJ84_RS14385	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CUJ84_RS14395	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CUJ84_RS14430	COG1846	Transcriptional regulator
CUJ84_RS14490	COG0656	L-ascorbic acid biosynthetic process
CUJ84_RS14495	COG0440	acetolactate synthase activity
CUJ84_RS14500	COG0028	Belongs to the TPP enzyme family
CUJ84_RS14510	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS14525	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CUJ84_RS14530	COG0560	Phosphoserine phosphatase
CUJ84_RS14540	COG0330	HflC and HflK could
CUJ84_RS14545	COG0330	HflC and HflK could
CUJ84_RS14555	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CUJ84_RS14585	COG0277	FAD linked oxidase domain protein
CUJ84_RS14590	COG0667	Aldo Keto reductase
CUJ84_RS14595	COG0583	DNA-binding transcription factor activity
CUJ84_RS14600	COG3180	Ammonia monooxygenase
CUJ84_RS14615	COG2885	chlorophyll binding
CUJ84_RS14620	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CUJ84_RS14625	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ84_RS14640	COG1487	ribonuclease activity
CUJ84_RS14650	COG2719	SpoVR family
CUJ84_RS14655	COG2718	Belongs to the UPF0229 family
CUJ84_RS14660	COG2766	serine protein kinase
CUJ84_RS14685	COG1335	isochorismatase
CUJ84_RS14710	COG0006	proline dipeptidase activity
CUJ84_RS14715	COG2264	protein methyltransferase activity
CUJ84_RS14720	COG1999	signal sequence binding
CUJ84_RS14725	COG0835	chemotaxis
CUJ84_RS14745	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CUJ84_RS14760	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CUJ84_RS14770	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CUJ84_RS14775	COG0849	cell division
CUJ84_RS14780	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CUJ84_RS14785	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUJ84_RS14790	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CUJ84_RS14795	COG0477	Major facilitator Superfamily
CUJ84_RS14805	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CUJ84_RS14810	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CUJ84_RS14815	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CUJ84_RS14825	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CUJ84_RS14830	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CUJ84_RS14840	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CUJ84_RS14855	COG0275	rRNA processing
CUJ84_RS14860	COG2001	Belongs to the MraZ family
CUJ84_RS14885	COG3023	N-Acetylmuramoyl-L-alanine amidase
CUJ84_RS14890	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CUJ84_RS14900	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS14925	COG3757	hydrolase, family 25
CUJ84_RS14940	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CUJ84_RS14965	COG0697	spore germination
CUJ84_RS14970	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CUJ84_RS14975	COG0028	Belongs to the TPP enzyme family
CUJ84_RS14980	COG0251	oxidation-reduction process
CUJ84_RS14995	COG1376	ErfK ybiS ycfS ynhG family protein
CUJ84_RS15000	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS15005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS15015	COG1192	Involved in chromosome partitioning
CUJ84_RS15030	COG0174	glutamine synthetase
CUJ84_RS15060	COG2011	ABC-type metal ion transport system permease component
CUJ84_RS15065	COG3842	ATPase activity
CUJ84_RS15080	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS15085	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS15090	COG1175	transmembrane transport
CUJ84_RS15100	COG2971	BadF BadG BcrA BcrD
CUJ84_RS15105	COG2188	Transcriptional regulator
CUJ84_RS15125	COG4702	Belongs to the UPF0303 family
CUJ84_RS15130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ84_RS15140	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS15145	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS15155	COG3842	ATPase activity
CUJ84_RS15245	COG2968	Membrane
CUJ84_RS15265	COG0432	Pfam Uncharacterised protein family UPF0047
CUJ84_RS15270	COG5507	3-demethylubiquinone-9 3-methyltransferase
CUJ84_RS15315	COG1917	Cupin 2, conserved barrel domain protein
CUJ84_RS15315	COG2207	Transcriptional regulator
CUJ84_RS15340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CUJ84_RS15350	COG1063	alcohol dehydrogenase
CUJ84_RS15360	COG2226	methyltransferase
CUJ84_RS15370	COG0358	DNA primase activity
CUJ84_RS15390	COG0505	Belongs to the CarA family
CUJ84_RS15400	COG0534	Mate efflux family protein
CUJ84_RS15410	COG0583	DNA-binding transcription factor activity
CUJ84_RS15415	COG0667	Aldo Keto reductase
CUJ84_RS15420	COG2321	neutral zinc metallopeptidase
CUJ84_RS15435	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CUJ84_RS15440	COG1573	uracil-dna glycosylase
CUJ84_RS15460	COG1301	dicarboxylic acid transport
CUJ84_RS15465	COG4191	Histidine kinase
CUJ84_RS15470	COG2204	response regulator
CUJ84_RS15475	COG1522	sequence-specific DNA binding
CUJ84_RS15480	COG0492	ferredoxin-NADP+ reductase activity
CUJ84_RS15485	COG0583	DNA-binding transcription factor activity
CUJ84_RS15495	COG2814	Major facilitator Superfamily
CUJ84_RS15500	COG1902	pentaerythritol trinitrate reductase activity
CUJ84_RS15515	COG0583	DNA-binding transcription factor activity
CUJ84_RS15520	COG0456	acetyltransferase
CUJ84_RS15520	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CUJ84_RS15530	COG0387	Pfam Sodium calcium exchanger
CUJ84_RS15540	COG1442	glycosyl transferase family 8
CUJ84_RS15560	COG2133	pyrroloquinoline quinone binding
CUJ84_RS15580	COG1278	Cold shock
CUJ84_RS15595	COG1733	regulation of RNA biosynthetic process
CUJ84_RS15605	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS15610	COG1846	Transcriptional regulator
CUJ84_RS15620	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS15635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS15640	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUJ84_RS15660	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CUJ84_RS15685	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CUJ84_RS15700	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CUJ84_RS15705	COG3300	MHYT domain
CUJ84_RS15705	COG5001	Diguanylate cyclase
CUJ84_RS15715	COG0193	aminoacyl-tRNA hydrolase activity
CUJ84_RS15725	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
CUJ84_RS15750	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CUJ84_RS15755	COG2857	Cytochrome c1
CUJ84_RS15755	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
CUJ84_RS15775	COG1132	(ABC) transporter
CUJ84_RS15785	COG1132	(ABC) transporter
CUJ84_RS15790	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CUJ84_RS15795	COG1283	sodium-dependent phosphate transmembrane transporter activity
CUJ84_RS15805	COG0408	coproporphyrinogen oxidase activity
CUJ84_RS15820	COG0617	tRNA 3'-terminal CCA addition
CUJ84_RS15835	COG0714	Associated with various cellular activities
CUJ84_RS15855	COG0454	-acetyltransferase
CUJ84_RS15865	COG0435	Glutathione S-transferase
CUJ84_RS15900	COG1733	regulation of RNA biosynthetic process
CUJ84_RS15905	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CUJ84_RS15915	COG3135	benzoate transporter
CUJ84_RS15920	COG0740	serine-type endopeptidase activity
CUJ84_RS15925	COG3416	Protein conserved in bacteria
CUJ84_RS15930	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CUJ84_RS15935	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CUJ84_RS15955	COG0512	Glutamine amidotransferase of anthranilate synthase
CUJ84_RS15955	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CUJ84_RS15970	COG2759	Belongs to the formate--tetrahydrofolate ligase family
CUJ84_RS15975	COG2862	Uncharacterized protein family, UPF0114
CUJ84_RS15985	COG2197	response regulator
CUJ84_RS16010	COG1435	thymidine kinase activity
CUJ84_RS16025	COG4175	Glycine betaine
CUJ84_RS16040	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS16055	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CUJ84_RS16060	COG0366	Alpha amylase catalytic
CUJ84_RS16070	COG0601	transmembrane transport
CUJ84_RS16075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS16085	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS16095	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS16120	COG1846	Transcriptional regulator
CUJ84_RS16125	COG1160	GTP binding
CUJ84_RS16145	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CUJ84_RS16160	COG0024	Methionine aminopeptidase
CUJ84_RS16175	COG4941	Belongs to the sigma-70 factor family
CUJ84_RS16180	COG3795	YCII-related domain
CUJ84_RS16185	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CUJ84_RS16190	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS16200	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ84_RS16215	COG0583	DNA-binding transcription factor activity
CUJ84_RS16235	COG0402	S-adenosylhomocysteine deaminase activity
CUJ84_RS16250	COG0671	phosphoesterase, PA-phosphatase related
CUJ84_RS16250	COG2453	phosphatase
CUJ84_RS16255	COG2267	carboxylic ester hydrolase activity
CUJ84_RS16260	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CUJ84_RS16275	COG2268	Band 7 protein
CUJ84_RS16285	COG2351	hydroxyisourate hydrolase activity
CUJ84_RS16290	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
CUJ84_RS16300	COG3648	Uricase
CUJ84_RS16300	COG3195	allantoin biosynthetic process
CUJ84_RS16315	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS16320	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS16320	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CUJ84_RS16325	COG3609	addiction module antidote protein, CC2985 family
CUJ84_RS16335	COG5002	protein histidine kinase activity
CUJ84_RS16335	COG0784	Response regulator, receiver
CUJ84_RS16335	COG2205	protein histidine kinase activity
CUJ84_RS16345	COG0477	Major facilitator Superfamily
CUJ84_RS16350	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS16360	COG4335	DNA alkylation repair
CUJ84_RS16365	COG0513	Belongs to the DEAD box helicase family
CUJ84_RS16375	COG2308	Evidence 4 Homologs of previously reported genes of
CUJ84_RS16395	COG0129	dihydroxy-acid dehydratase activity
CUJ84_RS16410	COG4214	carbohydrate transport
CUJ84_RS16440	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS16450	COG4213	ABC transporter substrate-binding protein
CUJ84_RS16455	COG4214	carbohydrate transport
CUJ84_RS16460	COG1129	ABC transporter
CUJ84_RS16510	COG0784	Response regulator, receiver
CUJ84_RS16660	COG3181	Tripartite tricarboxylate transporter family receptor
CUJ84_RS16665	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS16690	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CUJ84_RS16695	COG1063	alcohol dehydrogenase
CUJ84_RS16700	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS16705	COG1129	ABC transporter
CUJ84_RS16710	COG4214	carbohydrate transport
CUJ84_RS16715	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS16725	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS16735	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ84_RS16745	COG0583	DNA-binding transcription factor activity
CUJ84_RS16770	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS16785	COG2084	Dehydrogenase
CUJ84_RS16790	COG3395	kinase activity
CUJ84_RS16800	COG3622	Belongs to the hyi family
CUJ84_RS16805	COG2084	Dehydrogenase
CUJ84_RS16870	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ84_RS16890	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS16975	COG3108	Peptidase M15
CUJ84_RS16990	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS17000	COG0500	methyltransferase
CUJ84_RS17005	COG1216	Glycosyl transferase, family 2
CUJ84_RS17010	COG1132	(ABC) transporter
CUJ84_RS17015	COG1216	Glycosyl transferase, family 2
CUJ84_RS17015	COG1442	glycosyl transferase family 8
CUJ84_RS17050	COG1396	sequence-specific DNA binding
CUJ84_RS17055	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CUJ84_RS17075	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS17105	COG0463	Glycosyl transferase, family 2
CUJ84_RS17120	COG1215	transferase activity, transferring glycosyl groups
CUJ84_RS17145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS17150	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
CUJ84_RS17170	COG0489	protein tyrosine kinase activity
CUJ84_RS17170	COG3206	protein involved in exopolysaccharide biosynthesis
CUJ84_RS17195	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CUJ84_RS17215	COG0400	carboxylic ester hydrolase activity
CUJ84_RS17220	COG0346	lactoylglutathione lyase activity
CUJ84_RS17225	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CUJ84_RS17230	COG0662	Cupin 2, conserved barrel domain protein
CUJ84_RS17230	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CUJ84_RS17245	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS17255	COG1309	transcriptional regulator
CUJ84_RS17260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS17265	COG1131	(ABC) transporter
CUJ84_RS17270	COG0842	Transport permease protein
CUJ84_RS17275	COG0842	Transport permease protein
CUJ84_RS17295	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS17315	COG2346	COG2346, Truncated hemoglobins
CUJ84_RS17365	COG4558	Periplasmic binding protein
CUJ84_RS17370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUJ84_RS17375	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
CUJ84_RS17410	COG0784	Response regulator, receiver
CUJ84_RS17420	COG0493	'glutamate synthase
CUJ84_RS17430	COG4977	sequence-specific DNA binding
CUJ84_RS17445	COG0583	DNA-binding transcription factor activity
CUJ84_RS17455	COG4251	negative regulation of phosphorylation
CUJ84_RS17460	COG1309	transcriptional regulator
CUJ84_RS17490	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS17495	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS17500	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS17520	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CUJ84_RS17535	COG3706	GGDEF domain
CUJ84_RS17545	COG0804	urea catabolic process
CUJ84_RS17550	COG1442	glycosyl transferase family 8
CUJ84_RS17555	COG3755	Protein conserved in bacteria
CUJ84_RS17560	COG0832	Belongs to the urease beta subunit family
CUJ84_RS17565	COG3813	Protein conserved in bacteria
CUJ84_RS17570	COG0831	urea catabolic process
CUJ84_RS17615	COG2205	protein histidine kinase activity
CUJ84_RS17615	COG2198	Histidine kinase
CUJ84_RS17615	COG0784	Response regulator, receiver
CUJ84_RS17630	COG0683	leucine binding
CUJ84_RS17655	COG0559	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS17740	COG0564	pseudouridine synthase activity
CUJ84_RS17745	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CUJ84_RS17755	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CUJ84_RS17780	COG0129	dihydroxy-acid dehydratase activity
CUJ84_RS17785	COG2084	Dehydrogenase
CUJ84_RS17800	COG0657	acetylesterase activity
CUJ84_RS17810	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS17815	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS17830	COG2094	Belongs to the DNA glycosylase MPG family
CUJ84_RS17855	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS17875	COG1959	2 iron, 2 sulfur cluster binding
CUJ84_RS17880	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS17885	COG3622	Belongs to the hyi family
CUJ84_RS17900	COG3842	ATPase activity
CUJ84_RS17905	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS17910	COG1175	transmembrane transport
CUJ84_RS17915	COG1653	transport
CUJ84_RS17920	COG1846	Transcriptional regulator
CUJ84_RS17920	COG1940	carbohydrate kinase activity
CUJ84_RS17925	COG1653	transport
CUJ84_RS17960	COG2244	polysaccharide biosynthetic process
CUJ84_RS17965	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS17985	COG0489	protein tyrosine kinase activity
CUJ84_RS17995	COG1596	polysaccharide export
CUJ84_RS18030	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CUJ84_RS18045	COG4993	Dehydrogenase
CUJ84_RS18070	COG2186	Transcriptional regulator
CUJ84_RS18085	COG1129	ABC transporter
CUJ84_RS18090	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS18150	COG0471	metal ion transport
CUJ84_RS18150	COG3273	potassium ion transport
CUJ84_RS18155	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CUJ84_RS18160	COG1309	transcriptional regulator
CUJ84_RS18165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS18170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ84_RS18190	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CUJ84_RS18195	COG1473	amidohydrolase
CUJ84_RS18225	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CUJ84_RS18250	COG5001	Diguanylate cyclase
CUJ84_RS18250	COG3300	MHYT domain
CUJ84_RS18255	COG0306	phosphate transporter
CUJ84_RS18260	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CUJ84_RS18265	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CUJ84_RS18290	COG0683	leucine binding
CUJ84_RS18300	COG0559	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS18340	COG0482	sulfurtransferase activity
CUJ84_RS18345	COG5001	Diguanylate cyclase
CUJ84_RS18355	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ84_RS18370	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CUJ84_RS18375	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ84_RS18380	COG0037	tRNA processing
CUJ84_RS18390	COG2885	chlorophyll binding
CUJ84_RS18395	COG0823	Involved in the tonB-independent uptake of proteins
CUJ84_RS18410	COG0848	biopolymer transport protein
CUJ84_RS18420	COG0824	Thioesterase
CUJ84_RS18450	COG1692	metallophosphoesterase
CUJ84_RS18465	COG0217	transcriptional regulatory protein
CUJ84_RS18470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS18475	COG0840	transmembrane signaling receptor activity
CUJ84_RS18480	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CUJ84_RS18485	COG0632	four-way junction helicase activity
CUJ84_RS18490	COG2255	four-way junction helicase activity
CUJ84_RS18500	COG0494	nUDIX hydrolase
CUJ84_RS18505	COG2318	DinB family
CUJ84_RS18515	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CUJ84_RS18515	COG0392	lysyltransferase activity
CUJ84_RS18525	COG0668	transmembrane transport
CUJ84_RS18530	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
CUJ84_RS18550	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS18600	COG0126	phosphoglycerate kinase activity
CUJ84_RS18605	COG3588	fructose-bisphosphate aldolase
CUJ84_RS18610	COG0384	phenazine biosynthesis protein PhzF
CUJ84_RS18630	COG0254	rRNA binding
CUJ84_RS18635	COG1132	(ABC) transporter
CUJ84_RS18650	COG3422	double-strand break repair
CUJ84_RS18675	COG0483	inositol monophosphate 1-phosphatase activity
CUJ84_RS18680	COG1309	transcriptional regulator
CUJ84_RS18685	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS18690	COG2201	protein-glutamate methylesterase activity
CUJ84_RS18700	COG0835	chemotaxis
CUJ84_RS18705	COG0840	transmembrane signaling receptor activity
CUJ84_RS18710	COG0840	transmembrane signaling receptor activity
CUJ84_RS18715	COG0840	transmembrane signaling receptor activity
CUJ84_RS18720	COG0835	chemotaxis
CUJ84_RS18725	COG0643	Histidine kinase
CUJ84_RS18725	COG2198	Histidine kinase
CUJ84_RS18760	COG0640	Transcriptional regulator
CUJ84_RS18775	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CUJ84_RS18780	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CUJ84_RS18785	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CUJ84_RS18790	COG0457	Tetratricopeptide repeat
CUJ84_RS18800	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS18825	COG0583	DNA-binding transcription factor activity
CUJ84_RS18830	COG1942	4-Oxalocrotonate Tautomerase
CUJ84_RS18845	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS18850	COG0469	pyruvate kinase activity
CUJ84_RS18870	COG3750	Belongs to the UPF0335 family
CUJ84_RS18875	COG3108	Peptidase M15
CUJ84_RS18880	COG2204	response regulator
CUJ84_RS18915	COG5310	Homospermidine synthase
CUJ84_RS18930	COG0737	Belongs to the 5'-nucleotidase family
CUJ84_RS18935	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CUJ84_RS18940	COG0330	HflC and HflK could
CUJ84_RS18960	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CUJ84_RS18965	COG2951	lytic endotransglycosylase activity
CUJ84_RS18985	COG0069	glutamate synthase activity
CUJ84_RS18985	COG0067	glutamate synthase
CUJ84_RS18985	COG0070	glutamate synthase
CUJ84_RS19005	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ84_RS19105	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS19120	COG2308	Evidence 4 Homologs of previously reported genes of
CUJ84_RS19120	COG2307	Protein conserved in bacteria
CUJ84_RS19135	COG0058	SHG alpha-glucan phosphorylase activity
CUJ84_RS19140	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CUJ84_RS19145	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CUJ84_RS19150	COG0297	glycogen (starch) synthase activity
CUJ84_RS19155	COG0033	Phosphoglucomutase
CUJ84_RS19160	COG1523	belongs to the glycosyl hydrolase 13 family
CUJ84_RS19180	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ84_RS19180	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUJ84_RS19195	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS19215	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CUJ84_RS19225	COG2202	Pas domain
CUJ84_RS19225	COG3920	Histidine kinase
CUJ84_RS19260	COG5001	Diguanylate cyclase
CUJ84_RS19265	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CUJ84_RS19275	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
CUJ84_RS19280	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CUJ84_RS19285	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ84_RS19290	COG1609	Transcriptional regulator
CUJ84_RS19295	COG1846	Transcriptional regulator
CUJ84_RS19305	COG0523	cobalamin synthesis protein
CUJ84_RS19325	COG3706	GGDEF domain
CUJ84_RS19345	COG0583	DNA-binding transcription factor activity
CUJ84_RS19380	COG0800	Aldolase
CUJ84_RS19385	COG2954	triphosphatase activity
CUJ84_RS19400	COG1054	Belongs to the UPF0176 family
CUJ84_RS19420	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS19430	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS19435	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS19440	COG1129	ABC transporter
CUJ84_RS19445	COG1609	Transcriptional regulator
CUJ84_RS19450	COG2115	Belongs to the xylose isomerase family
CUJ84_RS19455	COG1070	Carbohydrate kinase
CUJ84_RS19460	COG1609	Transcriptional regulator
CUJ84_RS19485	COG1253	flavin adenine dinucleotide binding
CUJ84_RS19490	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CUJ84_RS19495	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
CUJ84_RS19505	COG2207	Transcriptional regulator
CUJ84_RS19515	COG0583	DNA-binding transcription factor activity
CUJ84_RS19520	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CUJ84_RS19525	COG3842	ATPase activity
CUJ84_RS19530	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS19535	COG1177	transmembrane transport
CUJ84_RS19585	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CUJ84_RS19605	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CUJ84_RS19675	COG1940	carbohydrate kinase activity
CUJ84_RS19700	COG1764	response to oxidative stress
CUJ84_RS19705	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS19720	COG1129	ABC transporter
CUJ84_RS19730	COG2186	Transcriptional regulator
CUJ84_RS19735	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ84_RS19750	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CUJ84_RS19765	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS19770	COG3386	PFAM SMP-30 Gluconolaconase
CUJ84_RS19780	COG3842	ATPase activity
CUJ84_RS19785	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS19790	COG1175	transmembrane transport
CUJ84_RS19805	COG1609	Transcriptional regulator
CUJ84_RS19815	COG3842	ATPase activity
CUJ84_RS19820	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS19825	COG1175	transmembrane transport
CUJ84_RS19830	COG1653	transport
CUJ84_RS19835	COG1609	Transcriptional regulator
CUJ84_RS19840	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CUJ84_RS19845	COG0720	synthase
CUJ84_RS19850	COG0602	queuosine metabolic process
CUJ84_RS19865	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CUJ84_RS19870	COG1780	Probably involved in ribonucleotide reductase function
CUJ84_RS19875	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CUJ84_RS19890	COG0493	'glutamate synthase
CUJ84_RS19890	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CUJ84_RS19905	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS19915	COG0693	protein deglycase activity
CUJ84_RS19930	COG0387	Pfam Sodium calcium exchanger
CUJ84_RS19955	COG0840	transmembrane signaling receptor activity
CUJ84_RS19955	COG2972	Histidine kinase
CUJ84_RS20000	COG0542	response to heat
CUJ84_RS20010	COG2890	protein-(glutamine-N5) methyltransferase activity
CUJ84_RS20015	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CUJ84_RS20025	COG0527	aspartate kinase activity
CUJ84_RS20030	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CUJ84_RS20055	COG2226	methyltransferase
CUJ84_RS20070	COG0494	nUDIX hydrolase
CUJ84_RS20075	COG0456	acetyltransferase
CUJ84_RS20080	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CUJ84_RS20090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CUJ84_RS20095	COG0653	protein targeting
CUJ84_RS20110	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUJ84_RS20115	COG0667	Aldo Keto reductase
CUJ84_RS20155	COG4651	solute:proton antiporter activity
CUJ84_RS20155	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CUJ84_RS20185	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CUJ84_RS20195	COG0300	oxidoreductase activity
CUJ84_RS20275	COG2884	Cell division ATP-binding protein ftsE
CUJ84_RS20295	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CUJ84_RS20310	COG0287	Prephenate dehydrogenase
CUJ84_RS20315	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CUJ84_RS20320	COG2226	methyltransferase
CUJ84_RS20325	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS20345	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CUJ84_RS20355	COG0563	adenylate kinase activity
CUJ84_RS20390	COG4536	flavin adenine dinucleotide binding
CUJ84_RS20395	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CUJ84_RS20400	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CUJ84_RS20410	COG4974	Belongs to the 'phage' integrase family
CUJ84_RS20415	COG0825	malonyl-CoA metabolic process
CUJ84_RS20420	COG3034	peptidoglycan biosynthetic process
CUJ84_RS20430	COG0523	cobalamin synthesis protein
CUJ84_RS20435	COG1686	Belongs to the peptidase S11 family
CUJ84_RS20450	COG4303	Ethanolamine ammonia lyase large subunit
CUJ84_RS20455	COG4302	ethanolamine ammonia-lyase activity
CUJ84_RS20460	COG0531	amino acid
CUJ84_RS20485	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CUJ84_RS20500	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS20505	COG1175	transmembrane transport
CUJ84_RS20520	COG0156	8-amino-7-oxononanoate synthase activity
CUJ84_RS20530	COG0729	surface antigen
CUJ84_RS20545	COG0010	Belongs to the arginase family
CUJ84_RS20550	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUJ84_RS20560	COG0835	chemotaxis
CUJ84_RS20570	COG2223	nitrite transmembrane transporter activity
CUJ84_RS20580	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
CUJ84_RS20585	COG3383	formate dehydrogenase (NAD+) activity
CUJ84_RS20600	COG0583	DNA-binding transcription factor activity
CUJ84_RS20605	COG0640	Transcriptional regulator
CUJ84_RS20610	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS20630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS20635	COG1116	anion transmembrane transporter activity
CUJ84_RS20640	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS20655	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CUJ84_RS20665	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CUJ84_RS20670	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CUJ84_RS20675	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CUJ84_RS20680	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CUJ84_RS20695	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS20700	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS20705	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS20710	COG0601	transmembrane transport
CUJ84_RS20730	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS20735	COG0129	dihydroxy-acid dehydratase activity
CUJ84_RS20745	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS20760	COG4974	Belongs to the 'phage' integrase family
CUJ84_RS20770	COG3038	cytochrome b561
CUJ84_RS20780	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS20795	COG0508	dehydrogenase complex catalyzes the overall conversion of
CUJ84_RS20810	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CUJ84_RS20820	COG0045	succinate-CoA ligase (ADP-forming) activity
CUJ84_RS20825	COG0039	L-malate dehydrogenase activity
CUJ84_RS20830	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CUJ84_RS20835	COG2845	Protein of unknown function (DUF459)
CUJ84_RS20840	COG3541	Predicted nucleotidyltransferase
CUJ84_RS20885	COG3842	ATPase activity
CUJ84_RS20890	COG4149	molybdate abc transporter
CUJ84_RS20910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS20915	COG0765	amino acid transport
CUJ84_RS20920	COG0765	amino acid transport
CUJ84_RS20925	COG2423	ornithine cyclodeaminase activity
CUJ84_RS20935	COG2186	Transcriptional regulator
CUJ84_RS20945	COG0765	amino acid transport
CUJ84_RS20950	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS20960	COG1126	abc transporter atp-binding protein
CUJ84_RS21000	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CUJ84_RS21005	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CUJ84_RS21010	COG0181	hydroxymethylbilane synthase activity
CUJ84_RS21035	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CUJ84_RS21035	COG0519	Catalyzes the synthesis of GMP from XMP
CUJ84_RS21050	COG1872	DUF167
CUJ84_RS21055	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CUJ84_RS21065	COG1217	gtp-binding protein TYPA
CUJ84_RS21070	COG0339	signal peptide processing
CUJ84_RS21085	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
CUJ84_RS21090	COG2267	carboxylic ester hydrolase activity
CUJ84_RS21100	COG1309	transcriptional regulator
CUJ84_RS21105	COG0137	argininosuccinate synthase activity
CUJ84_RS21130	COG4120	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS21140	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CUJ84_RS21150	COG1595	DNA-templated transcription, initiation
CUJ84_RS21160	COG2154	pterin-4-alpha-carbinolamine dehydratase
CUJ84_RS21165	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CUJ84_RS21170	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CUJ84_RS21180	COG4181	ATPase activity
CUJ84_RS21190	COG0670	Belongs to the BI1 family
CUJ84_RS21210	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CUJ84_RS21215	COG4133	protoheme IX ABC transporter activity
CUJ84_RS21225	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CUJ84_RS21230	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CUJ84_RS21250	COG2917	probably involved in intracellular septation
CUJ84_RS21255	COG0552	protein localization to endoplasmic reticulum
CUJ84_RS21260	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CUJ84_RS21265	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CUJ84_RS21280	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CUJ84_RS21285	COG0287	Prephenate dehydrogenase
CUJ84_RS21285	COG1605	Chorismate mutase
CUJ84_RS21290	COG0228	four-way junction DNA binding
CUJ84_RS21295	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CUJ84_RS21300	COG0336	Belongs to the RNA methyltransferase TrmD family
CUJ84_RS21305	COG0335	large ribosomal subunit rRNA binding
CUJ84_RS21315	COG0765	amino acid transport
CUJ84_RS21325	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CUJ84_RS21330	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS21340	COG0656	L-ascorbic acid biosynthetic process
CUJ84_RS21350	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS21365	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CUJ84_RS21370	COG1674	ftsk spoiiie
CUJ84_RS21375	COG0004	ammonium transporteR
CUJ84_RS21380	COG0347	Belongs to the P(II) protein family
CUJ84_RS21385	COG1946	Acyl-CoA thioesterase
CUJ84_RS21390	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ84_RS21395	COG2835	tetraacyldisaccharide 4'-kinase activity
CUJ84_RS21405	COG3118	belongs to the thioredoxin family
CUJ84_RS21425	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS21430	COG0583	DNA-binding transcription factor activity
CUJ84_RS21440	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS21485	COG4166	transmembrane transport
CUJ84_RS21490	COG0601	transmembrane transport
CUJ84_RS21495	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS21500	COG0405	Gamma-glutamyltransferase
CUJ84_RS21510	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS21520	COG3842	ATPase activity
CUJ84_RS21535	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS21540	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS21545	COG5383	Protein conserved in bacteria
CUJ84_RS21560	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS21570	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS21585	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CUJ84_RS21595	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CUJ84_RS21610	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CUJ84_RS21615	COG4821	SIS domain
CUJ84_RS21620	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CUJ84_RS21625	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ84_RS21630	COG2188	Transcriptional regulator
CUJ84_RS21640	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
CUJ84_RS21645	COG4178	(ABC) transporter
CUJ84_RS21655	COG0488	(ABC) transporter
CUJ84_RS21680	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CUJ84_RS21685	COG1329	Transcriptional regulator
CUJ84_RS21690	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
CUJ84_RS21715	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS21720	COG0183	Belongs to the thiolase family
CUJ84_RS21725	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
CUJ84_RS21735	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CUJ84_RS21750	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CUJ84_RS21755	COG0142	geranyltranstransferase activity
CUJ84_RS21775	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CUJ84_RS21780	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CUJ84_RS21785	COG2223	nitrite transmembrane transporter activity
CUJ84_RS21795	COG0697	spore germination
CUJ84_RS21800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS21805	COG0765	amino acid transport
CUJ84_RS21810	COG1126	abc transporter atp-binding protein
CUJ84_RS21820	COG0431	NADPH-dependent FMN reductase
CUJ84_RS21825	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CUJ84_RS21835	COG1132	(ABC) transporter
CUJ84_RS21865	COG3459	Glycosyltransferase 36 associated
CUJ84_RS21880	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS21885	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS21890	COG0601	transmembrane transport
CUJ84_RS21905	COG4211	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS21910	COG1129	ABC transporter
CUJ84_RS21975	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CUJ84_RS21980	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CUJ84_RS22000	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CUJ84_RS22005	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CUJ84_RS22010	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CUJ84_RS22015	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CUJ84_RS22020	COG0725	ABC transporter, periplasmic molybdate-binding protein
CUJ84_RS22025	COG4149	molybdate abc transporter
CUJ84_RS22030	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CUJ84_RS22040	COG0799	negative regulation of ribosome biogenesis
CUJ84_RS22045	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CUJ84_RS22055	COG0793	Belongs to the peptidase S41A family
CUJ84_RS22065	COG0494	nUDIX hydrolase
CUJ84_RS22080	COG0587	DNA-directed DNA polymerase activity
CUJ84_RS22115	COG0066	3-isopropylmalate dehydratase activity
CUJ84_RS22125	COG0473	3-isopropylmalate dehydrogenase activity
CUJ84_RS22130	COG0671	phosphoesterase, PA-phosphatase related
CUJ84_RS22145	COG1136	(ABC) transporter
CUJ84_RS22155	COG1785	Belongs to the alkaline phosphatase family
CUJ84_RS22165	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CUJ84_RS22175	COG4251	negative regulation of phosphorylation
CUJ84_RS22175	COG5001	Diguanylate cyclase
CUJ84_RS22175	COG3706	GGDEF domain
CUJ84_RS22175	COG2203	Gaf domain
CUJ84_RS22180	COG0288	reversible hydration of carbon dioxide
CUJ84_RS22195	COG2902	Dehydrogenase
CUJ84_RS22200	COG2270	Major facilitator Superfamily
CUJ84_RS22205	COG0138	bifunctional purine biosynthesis protein purh
CUJ84_RS22220	COG0501	Belongs to the peptidase M48B family
CUJ84_RS22230	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CUJ84_RS22250	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CUJ84_RS22255	COG0495	leucyl-tRNA aminoacylation
CUJ84_RS22280	COG0357	Ribosomal RNA small subunit methyltransferase G
CUJ84_RS22285	COG0445	tRNA wobble uridine modification
CUJ84_RS22290	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CUJ84_RS22295	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CUJ84_RS22300	COG1981	membrane
CUJ84_RS22305	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CUJ84_RS22315	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
CUJ84_RS22320	COG0424	maF-like protein
CUJ84_RS22325	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CUJ84_RS22330	COG0237	dephospho-CoA kinase activity
CUJ84_RS22340	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
CUJ84_RS22345	COG3030	protein affecting phage T7 exclusion by the F plasmid
CUJ84_RS22355	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CUJ84_RS22385	COG0435	Glutathione S-transferase
CUJ84_RS22410	COG0135	phosphoribosylanthranilate isomerase activity
CUJ84_RS22415	COG0133	tryptophan synthase activity
CUJ84_RS22420	COG0159	tryptophan synthase activity
CUJ84_RS22425	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CUJ84_RS22430	COG0285	dihydrofolate synthase activity
CUJ84_RS22440	COG1074	ATP-dependent DNA helicase activity
CUJ84_RS22445	COG2887	Belongs to the helicase family. UvrD subfamily
CUJ84_RS22450	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUJ84_RS22455	COG3178	'Phosphotransferase
CUJ84_RS22460	COG2205	protein histidine kinase activity
CUJ84_RS22465	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CUJ84_RS22470	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUJ84_RS22475	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CUJ84_RS22475	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CUJ84_RS22485	COG0642	Histidine kinase
CUJ84_RS22490	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS22495	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CUJ84_RS22510	COG1072	(Pantothenic acid kinase))
CUJ84_RS22515	COG0140	phosphoribosyl-ATP diphosphatase activity
CUJ84_RS22520	COG0107	imidazoleglycerol-phosphate synthase activity
CUJ84_RS22525	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
CUJ84_RS22540	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CUJ84_RS22550	COG0131	Imidazoleglycerol-phosphate dehydratase
CUJ84_RS22555	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CUJ84_RS22565	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CUJ84_RS22575	COG2124	cytochrome p450
CUJ84_RS22595	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
CUJ84_RS22605	COG1643	Atp-dependent helicase
CUJ84_RS22610	COG2423	ornithine cyclodeaminase activity
CUJ84_RS22685	COG2197	response regulator
CUJ84_RS22700	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CUJ84_RS22705	COG1215	transferase activity, transferring glycosyl groups
CUJ84_RS22720	COG2182	Extracellular solute-binding protein
CUJ84_RS22735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ84_RS22740	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS22755	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS22760	COG1309	transcriptional regulator
CUJ84_RS22770	COG1175	transmembrane transport
CUJ84_RS22775	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS22785	COG3842	ATPase activity
CUJ84_RS22800	COG0246	Mannitol dehydrogenase
CUJ84_RS22805	COG1904	glucuronate isomerase
CUJ84_RS22810	COG2900	Belongs to the SlyX family
CUJ84_RS22815	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS22820	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS22840	COG0539	negative regulation of cytoplasmic translation
CUJ84_RS22845	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CUJ84_RS22850	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CUJ84_RS22905	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CUJ84_RS22915	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CUJ84_RS22920	COG2813	Specifically methylates the guanine in position
CUJ84_RS22925	COG1185	polyribonucleotide nucleotidyltransferase activity
CUJ84_RS22930	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CUJ84_RS22935	COG0596	Alpha beta hydrolase
CUJ84_RS22940	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CUJ84_RS22945	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CUJ84_RS22950	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CUJ84_RS22965	COG0779	Required for maturation of 30S ribosomal subunits
CUJ84_RS22970	COG2814	Major facilitator Superfamily
CUJ84_RS22980	COG2951	lytic endotransglycosylase activity
CUJ84_RS22985	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CUJ84_RS22990	COG2258	MOSC domain
CUJ84_RS23000	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CUJ84_RS23005	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CUJ84_RS23020	COG2816	NAD+ diphosphatase activity
CUJ84_RS23025	COG2378	regulation of single-species biofilm formation
CUJ84_RS23040	COG0077	Prephenate dehydratase
CUJ84_RS23040	COG1605	Chorismate mutase
CUJ84_RS23045	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CUJ84_RS23050	COG3474	cytochrome
CUJ84_RS23055	COG0679	Auxin Efflux Carrier
CUJ84_RS23060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS23085	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CUJ84_RS23090	COG1396	sequence-specific DNA binding
CUJ84_RS23100	COG0484	heat shock protein binding
CUJ84_RS23105	COG0443	Heat shock 70 kDa protein
CUJ84_RS23110	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CUJ84_RS23125	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ84_RS23130	COG3300	MHYT domain
CUJ84_RS23130	COG5001	Diguanylate cyclase
CUJ84_RS23145	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUJ84_RS23145	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CUJ84_RS23150	COG1674	ftsk spoiiie
CUJ84_RS23160	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CUJ84_RS23165	COG3454	Phosphonate metabolism
CUJ84_RS23170	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
CUJ84_RS23175	COG3639	organic phosphonate transmembrane transporter activity
CUJ84_RS23180	COG3639	organic phosphonate transmembrane transporter activity
CUJ84_RS23190	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CUJ84_RS23200	COG4778	phosphonate C-P lyase system protein PhnL
CUJ84_RS23205	COG4107	phosphonate C-P lyase system protein PhnK
CUJ84_RS23210	COG3627	carbon phosphorus lyase activity
CUJ84_RS23215	COG3626	phosphonate metabolism
CUJ84_RS23220	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CUJ84_RS23225	COG3624	Phosphonate C-P lyase system protein PhnG
CUJ84_RS23230	COG2188	Transcriptional regulator
CUJ84_RS23235	COG0588	phosphoglycerate mutase activity
CUJ84_RS23240	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CUJ84_RS23245	COG1132	(ABC) transporter
CUJ84_RS23250	COG0837	glucose binding
CUJ84_RS23255	COG1803	Methylglyoxal synthase
CUJ84_RS23260	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
CUJ84_RS23265	COG1335	isochorismatase
CUJ84_RS23275	COG4166	transmembrane transport
CUJ84_RS23280	COG4174	ABC transporter (Permease)
CUJ84_RS23285	COG4239	(ABC) transporter, permease
CUJ84_RS23290	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS23305	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CUJ84_RS23335	COG1744	ABC transporter substrate-binding protein PnrA-like
CUJ84_RS23340	COG3845	ABC transporter
CUJ84_RS23345	COG4603	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS23350	COG1079	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS23360	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CUJ84_RS23365	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CUJ84_RS23370	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
CUJ84_RS23380	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CUJ84_RS23385	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CUJ84_RS23390	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CUJ84_RS23425	COG4964	Belongs to the GSP D family
CUJ84_RS23455	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS23465	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CUJ84_RS23480	COG0154	amidase activity
CUJ84_RS23485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS23490	COG0601	transmembrane transport
CUJ84_RS23500	COG0747	negative chemotaxis
CUJ84_RS23520	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CUJ84_RS23530	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CUJ84_RS23540	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
CUJ84_RS23565	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CUJ84_RS23580	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
CUJ84_RS23595	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUJ84_RS23645	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CUJ84_RS23670	COG0481	GTPase activity
CUJ84_RS23700	COG2137	regulation of response to DNA damage stimulus
CUJ84_RS23730	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUJ84_RS23730	COG0596	Alpha beta hydrolase
CUJ84_RS23735	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CUJ84_RS23740	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CUJ84_RS23745	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CUJ84_RS23750	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CUJ84_RS23755	COG0072	phenylalanine-tRNA ligase activity
CUJ84_RS23755	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CUJ84_RS23765	COG0667	Aldo Keto reductase
CUJ84_RS23775	COG3685	Protein conserved in bacteria
CUJ84_RS23820	COG1570	exodeoxyribonuclease VII activity
CUJ84_RS23825	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUJ84_RS23830	COG1846	Transcriptional regulator
CUJ84_RS23835	COG0697	spore germination
CUJ84_RS23840	COG2309	aminopeptidase activity
CUJ84_RS23845	COG0625	glutathione transferase activity
CUJ84_RS23860	COG1393	Belongs to the ArsC family
CUJ84_RS23875	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CUJ84_RS23880	COG4221	oxidoreductase activity
CUJ84_RS23890	COG0583	DNA-binding transcription factor activity
CUJ84_RS23905	COG2207	Transcriptional regulator
CUJ84_RS23910	COG1881	PFAM PEBP family protein
CUJ84_RS23930	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CUJ84_RS23935	COG0583	DNA-binding transcription factor activity
CUJ84_RS23940	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS23950	COG0519	Catalyzes the synthesis of GMP from XMP
CUJ84_RS23950	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CUJ84_RS23995	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CUJ84_RS24005	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CUJ84_RS24015	COG1968	undecaprenyl-diphosphatase activity
CUJ84_RS24030	COG0284	orotidine-5'-phosphate decarboxylase activity
CUJ84_RS24040	COG3963	phosphatidate phosphatase activity
CUJ84_RS24055	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CUJ84_RS24060	COG0792	nuclease activity
CUJ84_RS24070	COG1609	Transcriptional regulator
CUJ84_RS24085	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS24090	COG0189	ligase activity
CUJ84_RS24095	COG0606	chelatase, subunit chli
CUJ84_RS24110	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CUJ84_RS24115	COG1280	lysine exporter protein (LysE YggA)
CUJ84_RS24120	COG0783	Belongs to the Dps family
CUJ84_RS24125	COG0697	spore germination
CUJ84_RS24130	COG1522	sequence-specific DNA binding
CUJ84_RS24140	COG0756	dUTP diphosphatase activity
CUJ84_RS24145	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CUJ84_RS24150	COG0583	DNA-binding transcription factor activity
CUJ84_RS24180	COG2807	transmembrane transport
CUJ84_RS24190	COG1741	Belongs to the pirin family
CUJ84_RS24200	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CUJ84_RS24205	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS24210	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS24215	COG0583	DNA-binding transcription factor activity
CUJ84_RS24225	COG2814	Major facilitator Superfamily
CUJ84_RS24235	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CUJ84_RS24255	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CUJ84_RS24260	COG2986	histidine ammonia-lyase
CUJ84_RS24265	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
CUJ84_RS24270	COG2226	methyltransferase
CUJ84_RS24275	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CUJ84_RS24280	COG1024	Enoyl-CoA hydratase
CUJ84_RS24285	COG0268	Binds directly to 16S ribosomal RNA
CUJ84_RS24290	COG1192	Involved in chromosome partitioning
CUJ84_RS24295	COG1475	DNA binding
CUJ84_RS24300	COG1414	Transcriptional regulator
CUJ84_RS24305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS24320	COG1175	transmembrane transport
CUJ84_RS24325	COG3833	ABC-type maltose transport systems, permease component
CUJ84_RS24330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS24335	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS24340	COG1175	transmembrane transport
CUJ84_RS24360	COG0657	acetylesterase activity
CUJ84_RS24375	COG1349	DNA-binding transcription factor activity
CUJ84_RS24385	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS24395	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS24410	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CUJ84_RS24430	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS24435	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS24440	COG1522	sequence-specific DNA binding
CUJ84_RS24445	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ84_RS24450	COG1126	abc transporter atp-binding protein
CUJ84_RS24460	COG0765	amino acid transport
CUJ84_RS24465	COG0765	amino acid transport
CUJ84_RS24475	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CUJ84_RS24480	COG2423	ornithine cyclodeaminase activity
CUJ84_RS24485	COG0006	proline dipeptidase activity
CUJ84_RS24490	COG3608	succinylglutamate desuccinylase aspartoacylase
CUJ84_RS24495	COG0840	transmembrane signaling receptor activity
CUJ84_RS24510	COG1309	transcriptional regulator
CUJ84_RS24530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS24535	COG0765	amino acid transport
CUJ84_RS24540	COG0765	amino acid transport
CUJ84_RS24560	COG2186	Transcriptional regulator
CUJ84_RS24575	COG0765	amino acid transport
CUJ84_RS24590	COG2801	Transposase and inactivated derivatives
CUJ84_RS24610	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS24615	COG1177	transmembrane transport
CUJ84_RS24625	COG3842	ATPase activity
CUJ84_RS24645	COG2909	trisaccharide binding
CUJ84_RS24665	COG1737	Transcriptional regulator
CUJ84_RS24670	COG1129	ABC transporter
CUJ84_RS24675	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS24685	COG0596	Alpha beta hydrolase
CUJ84_RS24690	COG1609	Transcriptional regulator
CUJ84_RS24700	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS24730	COG1129	ABC transporter
CUJ84_RS24735	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS24740	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS24755	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CUJ84_RS24765	COG1349	DNA-binding transcription factor activity
CUJ84_RS24770	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS24775	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS24780	COG1129	ABC transporter
CUJ84_RS24815	COG1349	DNA-binding transcription factor activity
CUJ84_RS24820	COG0149	triose-phosphate isomerase activity
CUJ84_RS24825	COG0698	ribose 5-phosphate isomerase
CUJ84_RS24830	COG1793	dna ligase
CUJ84_RS24830	COG3285	dna ligase
CUJ84_RS24850	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS24855	COG1175	transmembrane transport
CUJ84_RS24865	COG3842	ATPase activity
CUJ84_RS24870	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS24875	COG2186	Transcriptional regulator
CUJ84_RS24895	COG0596	Alpha beta hydrolase
CUJ84_RS24910	COG0471	metal ion transport
CUJ84_RS24910	COG3273	potassium ion transport
CUJ84_RS24920	COG0747	negative chemotaxis
CUJ84_RS24925	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS24935	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CUJ84_RS24955	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ84_RS24965	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS24990	COG1051	belongs to the nudix hydrolase family
CUJ84_RS25000	COG3842	ATPase activity
CUJ84_RS25005	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
CUJ84_RS25010	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CUJ84_RS25015	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS25020	COG1175	transmembrane transport
CUJ84_RS25025	COG2182	Extracellular solute-binding protein
CUJ84_RS25030	COG2971	BadF BadG BcrA BcrD
CUJ84_RS25035	COG1349	DNA-binding transcription factor activity
CUJ84_RS25040	COG1486	melibiose metabolic process
CUJ84_RS25070	COG1609	Transcriptional regulator
CUJ84_RS25085	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS25090	COG3842	ATPase activity
CUJ84_RS25095	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
CUJ84_RS25110	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS25140	COG0601	transmembrane transport
CUJ84_RS25145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS25150	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS25155	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS25170	COG1473	amidohydrolase
CUJ84_RS25175	COG1126	abc transporter atp-binding protein
CUJ84_RS25205	COG4585	Histidine kinase
CUJ84_RS25210	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS25215	COG1129	ABC transporter
CUJ84_RS25220	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS25235	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
CUJ84_RS25245	COG1846	Transcriptional regulator
CUJ84_RS25250	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS25260	COG0583	DNA-binding transcription factor activity
CUJ84_RS25270	COG1309	transcriptional regulator
CUJ84_RS25280	COG0596	Alpha beta hydrolase
CUJ84_RS25300	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ84_RS25310	COG1802	Transcriptional regulator
CUJ84_RS25315	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CUJ84_RS25320	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CUJ84_RS25325	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ84_RS25330	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
CUJ84_RS25335	COG2080	2 iron, 2 sulfur cluster binding
CUJ84_RS25365	COG0402	S-adenosylhomocysteine deaminase activity
CUJ84_RS25375	COG2249	NAD(P)H dehydrogenase (quinone) activity
CUJ84_RS25380	COG0251	oxidation-reduction process
CUJ84_RS25385	COG0840	transmembrane signaling receptor activity
CUJ84_RS25405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CUJ84_RS25425	COG0626	cystathionine gamma-synthase activity
CUJ84_RS25445	COG4774	siderophore transport
CUJ84_RS25450	COG1487	ribonuclease activity
CUJ84_RS25455	COG4691	Plasmid stability protein
CUJ84_RS25490	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS25520	COG0601	transmembrane transport
CUJ84_RS25525	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS25530	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS25540	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS25550	COG0431	NADPH-dependent FMN reductase
CUJ84_RS25555	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ84_RS25565	COG1335	isochorismatase
CUJ84_RS25570	COG3706	GGDEF domain
CUJ84_RS25575	COG2186	Transcriptional regulator
CUJ84_RS25580	COG0747	negative chemotaxis
CUJ84_RS25595	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS25600	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS25630	COG0405	Gamma-glutamyltransferase
CUJ84_RS25635	COG0601	transmembrane transport
CUJ84_RS25640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS25645	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS25650	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS25655	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
CUJ84_RS25680	COG2885	chlorophyll binding
CUJ84_RS25705	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS25715	COG1175	transmembrane transport
CUJ84_RS25720	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS25725	COG1940	carbohydrate kinase activity
CUJ84_RS25735	COG3842	ATPase activity
CUJ84_RS25740	COG2972	Histidine kinase
CUJ84_RS25740	COG0840	transmembrane signaling receptor activity
CUJ84_RS25745	COG1858	cytochrome C peroxidase
CUJ84_RS25755	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
CUJ84_RS25760	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CUJ84_RS25770	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
CUJ84_RS25790	COG2197	response regulator
CUJ84_RS25810	COG1733	regulation of RNA biosynthetic process
CUJ84_RS25815	COG3321	synthase
CUJ84_RS25815	COG0604	alcohol dehydrogenase
CUJ84_RS25815	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS25825	COG0318	PFAM AMP-dependent synthetase and ligase
CUJ84_RS25830	COG0183	Belongs to the thiolase family
CUJ84_RS25835	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ84_RS25855	COG1295	ribonuclease BN
CUJ84_RS25870	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ84_RS25880	COG3842	ATPase activity
CUJ84_RS25890	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS25905	COG1461	Dihydroxyacetone kinase
CUJ84_RS25910	COG2376	Dihydroxyacetone kinase
CUJ84_RS25920	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS25925	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS25930	COG1129	ABC transporter
CUJ84_RS25945	COG0287	Prephenate dehydrogenase
CUJ84_RS25960	COG2186	Transcriptional regulator
CUJ84_RS25970	COG2801	Transposase and inactivated derivatives
CUJ84_RS25985	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
CUJ84_RS25995	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
CUJ84_RS26000	COG1063	alcohol dehydrogenase
CUJ84_RS26010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS26020	COG1522	sequence-specific DNA binding
CUJ84_RS26025	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CUJ84_RS26030	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS26040	COG1473	amidohydrolase
CUJ84_RS26045	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ84_RS26055	COG1522	sequence-specific DNA binding
CUJ84_RS26060	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS26070	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUJ84_RS26085	COG1126	abc transporter atp-binding protein
CUJ84_RS26090	COG0765	amino acid transport
CUJ84_RS26095	COG0765	amino acid transport
CUJ84_RS26100	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS26105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS26110	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS26115	COG3938	Belongs to the proline racemase family
CUJ84_RS26120	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS26125	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS26170	COG3838	Conjugal transfer protein Trbc
CUJ84_RS26175	COG3702	type iv secretory pathway
CUJ84_RS26180	COG3451	type IV secretory pathway VirB4
CUJ84_RS26195	COG3704	protein secretion by the type IV secretion system
CUJ84_RS26205	COG3736	Type IV secretory pathway, component VirB8
CUJ84_RS26210	COG3504	Conjugal transfer protein
CUJ84_RS26215	COG2948	multi-organism process
CUJ84_RS26220	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
CUJ84_RS26290	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CUJ84_RS26345	COG1609	Transcriptional regulator
CUJ84_RS26355	COG1175	transmembrane transport
CUJ84_RS26360	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS26370	COG3842	ATPase activity
CUJ84_RS26385	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS26390	COG3077	Addiction module antitoxin, RelB DinJ family
CUJ84_RS26420	COG0251	oxidation-reduction process
CUJ84_RS26425	COG2207	Transcriptional regulator
CUJ84_RS26430	COG3547	Transposase (IS116 IS110 IS902 family)
CUJ84_RS26465	COG0300	oxidoreductase activity
CUJ84_RS26470	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS26475	COG0583	DNA-binding transcription factor activity
CUJ84_RS26495	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS26505	COG3842	ATPase activity
CUJ84_RS26510	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS26525	COG0251	oxidation-reduction process
CUJ84_RS26555	COG0167	dihydroorotate dehydrogenase activity
CUJ84_RS26565	COG2353	YceI-like domain
CUJ84_RS26575	COG1177	transmembrane transport
CUJ84_RS26580	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS26590	COG3842	ATPase activity
CUJ84_RS26595	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ84_RS26600	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUJ84_RS26605	COG1414	Transcriptional regulator
CUJ84_RS26610	COG0346	lactoylglutathione lyase activity
CUJ84_RS26615	COG0431	NADPH-dependent FMN reductase
CUJ84_RS26625	COG3971	2-oxopent-4-enoate hydratase activity
CUJ84_RS26630	COG0179	Fumarylacetoacetate (FAA) hydrolase
CUJ84_RS26665	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS26670	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS26680	COG5441	Belongs to the UPF0261 family
CUJ84_RS26685	COG1414	Transcriptional regulator
CUJ84_RS26690	COG0531	amino acid
CUJ84_RS26695	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS26700	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ84_RS26750	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CUJ84_RS26755	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS26790	COG3453	Protein conserved in bacteria
CUJ84_RS26790	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS26860	COG2022	thiamine diphosphate biosynthetic process
CUJ84_RS26915	COG2202	Pas domain
CUJ84_RS26915	COG3920	Histidine kinase
CUJ84_RS26925	COG3920	Histidine kinase
CUJ84_RS26940	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS26950	COG0071	Belongs to the small heat shock protein (HSP20) family
CUJ84_RS26970	COG2259	Doxx family
CUJ84_RS26975	COG1733	regulation of RNA biosynthetic process
CUJ84_RS27005	COG3177	Filamentation induced by cAMP protein fic
CUJ84_RS27015	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS27035	COG1309	transcriptional regulator
CUJ84_RS27045	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS27065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27070	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS27085	COG0747	negative chemotaxis
CUJ84_RS27090	COG0747	negative chemotaxis
CUJ84_RS27095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27105	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27115	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CUJ84_RS27125	COG0765	amino acid transport
CUJ84_RS27135	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CUJ84_RS27160	COG0747	negative chemotaxis
CUJ84_RS27170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS27185	COG2130	NADP-dependent
CUJ84_RS27210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27240	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS27270	COG0667	Aldo Keto reductase
CUJ84_RS27280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27300	COG0583	DNA-binding transcription factor activity
CUJ84_RS27305	COG0778	Nitroreductase
CUJ84_RS27325	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS27335	COG2188	Transcriptional regulator
CUJ84_RS27340	COG1116	anion transmembrane transporter activity
CUJ84_RS27345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS27350	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS27380	COG4977	sequence-specific DNA binding
CUJ84_RS27420	COG0523	cobalamin synthesis protein
CUJ84_RS27430	COG1454	alcohol dehydrogenase
CUJ84_RS27440	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CUJ84_RS27445	COG0411	ABC transporter
CUJ84_RS27475	COG2188	Transcriptional regulator
CUJ84_RS27500	COG2986	histidine ammonia-lyase
CUJ84_RS27510	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ84_RS27515	COG1024	Enoyl-CoA hydratase
CUJ84_RS27520	COG2188	Transcriptional regulator
CUJ84_RS27530	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CUJ84_RS27540	COG2188	Transcriptional regulator
CUJ84_RS27545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ84_RS27550	COG0747	negative chemotaxis
CUJ84_RS27560	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS27565	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS27585	COG3609	addiction module antidote protein, CC2985 family
CUJ84_RS27600	COG0402	S-adenosylhomocysteine deaminase activity
CUJ84_RS27610	COG0590	tRNA wobble adenosine to inosine editing
CUJ84_RS27610	COG0037	tRNA processing
CUJ84_RS27625	COG2072	flavoprotein involved in K transport
CUJ84_RS27630	COG1177	transmembrane transport
CUJ84_RS27635	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS27640	COG3842	ATPase activity
CUJ84_RS27645	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CUJ84_RS27685	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CUJ84_RS27695	COG2814	Major facilitator Superfamily
CUJ84_RS27730	COG3831	ATPase activity
CUJ84_RS27755	COG2161	toxin-antitoxin pair type II binding
CUJ84_RS27765	COG2824	Alkylphosphonate utilization operon protein PhnA
CUJ84_RS27770	COG3505	Type IV secretory pathway VirD4
CUJ84_RS27795	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS27800	COG0156	8-amino-7-oxononanoate synthase activity
CUJ84_RS27810	COG1177	transmembrane transport
CUJ84_RS27815	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS27820	COG3842	ATPase activity
CUJ84_RS27830	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CUJ84_RS27835	COG0028	Belongs to the TPP enzyme family
CUJ84_RS27840	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS27845	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS27865	COG0631	protein serine/threonine phosphatase activity
CUJ84_RS28015	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS28040	COG1137	ATPase activity
CUJ84_RS28055	COG2169	Transcriptional regulator
CUJ84_RS28075	COG1024	Enoyl-CoA hydratase
CUJ84_RS28085	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS28095	COG4251	negative regulation of phosphorylation
CUJ84_RS28095	COG2203	Gaf domain
CUJ84_RS28095	COG5001	Diguanylate cyclase
CUJ84_RS28095	COG3706	GGDEF domain
CUJ84_RS28100	COG0243	molybdopterin cofactor binding
CUJ84_RS28130	COG4175	Glycine betaine
CUJ84_RS28130	COG0517	IMP dehydrogenase activity
CUJ84_RS28135	COG4176	ABC-type proline glycine betaine transport system permease component
CUJ84_RS28145	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CUJ84_RS28155	COG1902	pentaerythritol trinitrate reductase activity
CUJ84_RS28155	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUJ84_RS28165	COG2086	electron transfer activity
CUJ84_RS28170	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CUJ84_RS28180	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
CUJ84_RS28185	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
CUJ84_RS28190	COG3791	Glutathione-dependent formaldehyde-activating
CUJ84_RS28200	COG1802	Transcriptional regulator
CUJ84_RS28205	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS28210	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS28215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS28225	COG3448	diguanylate cyclase activity
CUJ84_RS28225	COG4175	Glycine betaine
CUJ84_RS28230	COG4176	ABC-type proline glycine betaine transport system permease component
CUJ84_RS28235	COG4176	ABC-type proline glycine betaine transport system permease component
CUJ84_RS28240	COG3938	Belongs to the proline racemase family
CUJ84_RS28250	COG0006	proline dipeptidase activity
CUJ84_RS28265	COG0583	DNA-binding transcription factor activity
CUJ84_RS28270	COG0110	maltose O-acetyltransferase activity
CUJ84_RS28275	COG4251	negative regulation of phosphorylation
CUJ84_RS28275	COG5001	Diguanylate cyclase
CUJ84_RS28275	COG3706	GGDEF domain
CUJ84_RS28275	COG2203	Gaf domain
CUJ84_RS28300	COG4221	oxidoreductase activity
CUJ84_RS28315	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS28325	COG1733	regulation of RNA biosynthetic process
CUJ84_RS28330	COG1522	sequence-specific DNA binding
CUJ84_RS28345	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ84_RS28350	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ84_RS28365	COG1653	transport
CUJ84_RS28380	COG3842	ATPase activity
CUJ84_RS28400	COG1609	Transcriptional regulator
CUJ84_RS28425	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS28445	COG1522	sequence-specific DNA binding
CUJ84_RS28455	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS28460	COG0601	transmembrane transport
CUJ84_RS28485	COG3395	kinase activity
CUJ84_RS28490	COG3622	Belongs to the hyi family
CUJ84_RS28495	COG2084	Dehydrogenase
CUJ84_RS28505	COG1609	Transcriptional regulator
CUJ84_RS28510	COG0235	Class ii aldolase
CUJ84_RS28520	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS28535	COG0765	amino acid transport
CUJ84_RS28540	COG0765	amino acid transport
CUJ84_RS28550	COG0010	Belongs to the arginase family
CUJ84_RS28555	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS28560	COG0473	3-isopropylmalate dehydrogenase activity
CUJ84_RS28565	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS28575	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CUJ84_RS28630	COG0436	Aminotransferase
CUJ84_RS28635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS28640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS28650	COG2186	Transcriptional regulator
CUJ84_RS28655	COG0277	FAD linked oxidase domain protein
CUJ84_RS28655	COG0247	lactate metabolic process
CUJ84_RS28660	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS28665	COG4221	oxidoreductase activity
CUJ84_RS28675	COG0459	protein refolding
CUJ84_RS28680	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CUJ84_RS28735	COG3842	ATPase activity
CUJ84_RS28745	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS28750	COG1175	transmembrane transport
CUJ84_RS28775	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS28785	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS28800	COG2186	Transcriptional regulator
CUJ84_RS28805	COG1609	Transcriptional regulator
CUJ84_RS28820	COG1175	transmembrane transport
CUJ84_RS28825	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS28835	COG0840	transmembrane signaling receptor activity
CUJ84_RS28855	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CUJ84_RS28870	COG1175	transmembrane transport
CUJ84_RS28875	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS28880	COG1609	Transcriptional regulator
CUJ84_RS28900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CUJ84_RS28910	COG1953	Uracil, thiamine, allantoin
CUJ84_RS28915	COG2972	Histidine kinase
CUJ84_RS28915	COG0840	transmembrane signaling receptor activity
CUJ84_RS28920	COG0598	Magnesium transport protein CorA
CUJ84_RS28930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CUJ84_RS28940	COG0366	Alpha amylase catalytic
CUJ84_RS28945	COG0366	Alpha amylase catalytic
CUJ84_RS28950	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CUJ84_RS28955	COG0028	Belongs to the TPP enzyme family
CUJ84_RS28960	COG1448	Aminotransferase
CUJ84_RS28970	COG1120	ATPase activity
CUJ84_RS28975	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CUJ84_RS29025	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CUJ84_RS29030	COG1640	4-alpha-glucanotransferase
CUJ84_RS29090	COG1609	Transcriptional regulator
CUJ84_RS29095	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS29105	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS29110	COG2972	Histidine kinase
CUJ84_RS29110	COG0840	transmembrane signaling receptor activity
CUJ84_RS29125	COG0392	lysyltransferase activity
CUJ84_RS29130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CUJ84_RS29140	COG0697	spore germination
CUJ84_RS29145	COG2814	Major facilitator Superfamily
CUJ84_RS29155	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CUJ84_RS29175	COG3485	protocatechuate 3,4-dioxygenase
CUJ84_RS29190	COG1129	ABC transporter
CUJ84_RS29195	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS29205	COG0667	Aldo Keto reductase
CUJ84_RS29210	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CUJ84_RS29220	COG1070	Carbohydrate kinase
CUJ84_RS29230	COG1278	Cold shock
CUJ84_RS29240	COG0583	DNA-binding transcription factor activity
CUJ84_RS29245	COG2855	membrane
CUJ84_RS29260	COG2030	dehydratase
CUJ84_RS29275	COG1732	Glycine betaine
CUJ84_RS29290	COG1174	glycine betaine transport
CUJ84_RS29295	COG1174	glycine betaine transport
CUJ84_RS29315	COG3842	ATPase activity
CUJ84_RS29325	COG1175	transmembrane transport
CUJ84_RS29330	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS29355	COG1129	ABC transporter
CUJ84_RS29360	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS29365	COG1737	Transcriptional regulator
CUJ84_RS29370	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CUJ84_RS29375	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ84_RS29380	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
CUJ84_RS29380	COG1672	PFAM Archaeal ATPase
CUJ84_RS29390	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS29395	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS29400	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS29405	COG0601	transmembrane transport
CUJ84_RS29410	COG0747	negative chemotaxis
CUJ84_RS29425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS29430	COG2186	Transcriptional regulator
CUJ84_RS29435	COG0747	negative chemotaxis
CUJ84_RS29440	COG0601	transmembrane transport
CUJ84_RS29445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS29450	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS29455	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ84_RS29470	COG0778	Nitroreductase
CUJ84_RS29485	COG4566	intracellular signal transduction
CUJ84_RS29490	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS29495	COG4566	intracellular signal transduction
CUJ84_RS29500	COG4191	Histidine kinase
CUJ84_RS29530	COG1475	DNA binding
CUJ84_RS29535	COG1414	Transcriptional regulator
CUJ84_RS29545	COG0670	Belongs to the BI1 family
CUJ84_RS29580	COG4953	penicillin-binding protein 1C
CUJ84_RS29590	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUJ84_RS29595	COG0784	Response regulator, receiver
CUJ84_RS29605	COG2814	Major facilitator Superfamily
CUJ84_RS29615	COG1609	Transcriptional regulator
CUJ84_RS29620	COG1609	Transcriptional regulator
CUJ84_RS29630	COG1132	(ABC) transporter
CUJ84_RS29635	COG1132	(ABC) transporter
CUJ84_RS29645	COG0784	Response regulator, receiver
CUJ84_RS29645	COG4191	Histidine kinase
CUJ84_RS29655	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CUJ84_RS29660	COG1845	cytochrome c oxidase, subunit III
CUJ84_RS29665	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CUJ84_RS29670	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CUJ84_RS29675	COG0477	Major facilitator Superfamily
CUJ84_RS29690	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CUJ84_RS29690	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CUJ84_RS29695	COG1132	(ABC) transporter
CUJ84_RS29715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS29725	COG0747	negative chemotaxis
CUJ84_RS29730	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS29755	COG5265	(ABC) transporter
CUJ84_RS29760	COG1959	2 iron, 2 sulfur cluster binding
CUJ84_RS29770	COG3152	Membrane
CUJ84_RS29790	COG0714	Associated with various cellular activities
CUJ84_RS29825	COG0438	transferase activity, transferring glycosyl groups
CUJ84_RS29835	COG0596	Alpha beta hydrolase
CUJ84_RS29845	COG1234	tRNA 3'-trailer cleavage
CUJ84_RS29875	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CUJ84_RS29880	COG0765	amino acid transport
CUJ84_RS29885	COG0765	amino acid transport
CUJ84_RS29890	COG1126	abc transporter atp-binding protein
CUJ84_RS29895	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS29900	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CUJ84_RS29905	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS29915	COG3485	protocatechuate 3,4-dioxygenase
CUJ84_RS29920	COG3485	protocatechuate 3,4-dioxygenase
CUJ84_RS29925	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ84_RS29930	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CUJ84_RS29935	COG0583	DNA-binding transcription factor activity
CUJ84_RS29945	COG5654	RES domain protein
CUJ84_RS29995	COG0784	Response regulator, receiver
CUJ84_RS30005	COG0784	Response regulator, receiver
CUJ84_RS30040	COG0628	permease
CUJ84_RS30045	COG2197	response regulator
CUJ84_RS30095	COG0730	response to heat
CUJ84_RS30180	COG0484	heat shock protein binding
CUJ84_RS30190	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
CUJ84_RS30200	COG2986	histidine ammonia-lyase
CUJ84_RS30205	COG1228	amidohydrolase
CUJ84_RS30210	COG0402	S-adenosylhomocysteine deaminase activity
CUJ84_RS30245	COG2986	histidine ammonia-lyase
CUJ84_RS30280	COG3119	arylsulfatase activity
CUJ84_RS30290	COG3119	arylsulfatase activity
CUJ84_RS30300	COG4566	intracellular signal transduction
CUJ84_RS30310	COG0671	phosphoesterase, PA-phosphatase related
CUJ84_RS30335	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CUJ84_RS30365	COG1486	melibiose metabolic process
CUJ84_RS30370	COG0747	negative chemotaxis
CUJ84_RS30375	COG0601	transmembrane transport
CUJ84_RS30380	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS30385	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS30390	COG1486	melibiose metabolic process
CUJ84_RS30415	COG0697	spore germination
CUJ84_RS30450	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS30520	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS30555	COG1858	cytochrome C peroxidase
CUJ84_RS30565	COG1414	Transcriptional regulator
CUJ84_RS30575	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CUJ84_RS30580	COG0183	Belongs to the thiolase family
CUJ84_RS30630	COG0784	Response regulator, receiver
CUJ84_RS30630	COG4191	Histidine kinase
CUJ84_RS30645	COG1573	uracil-dna glycosylase
CUJ84_RS30680	COG0583	DNA-binding transcription factor activity
CUJ84_RS30685	COG0583	DNA-binding transcription factor activity
CUJ84_RS30735	COG1454	alcohol dehydrogenase
CUJ84_RS30740	COG3485	protocatechuate 3,4-dioxygenase
CUJ84_RS30750	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS30755	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS30780	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS30785	COG1129	ABC transporter
CUJ84_RS30790	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS30800	COG1063	alcohol dehydrogenase
CUJ84_RS30810	COG0583	DNA-binding transcription factor activity
CUJ84_RS30895	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
CUJ84_RS30895	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
CUJ84_RS30940	COG1278	Cold shock
CUJ84_RS31055	COG4372	Transposase
CUJ84_RS31065	COG2963	transposase activity
CUJ84_RS31075	COG1725	Transcriptional regulator
CUJ84_RS31080	COG0626	cystathionine gamma-synthase activity
CUJ84_RS31095	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS31100	COG3842	ATPase activity
CUJ84_RS31105	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CUJ84_RS31120	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CUJ84_RS31125	COG4208	sulfate ABC transporter
CUJ84_RS31135	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CUJ84_RS31155	COG2205	protein histidine kinase activity
CUJ84_RS31160	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
CUJ84_RS31165	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
CUJ84_RS31170	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
CUJ84_RS31185	COG1063	alcohol dehydrogenase
CUJ84_RS31205	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS31270	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS31275	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS31290	COG1349	DNA-binding transcription factor activity
CUJ84_RS31295	COG3347	Dehydrogenase
CUJ84_RS31295	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS31300	COG4952	isomerase
CUJ84_RS31305	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CUJ84_RS31310	COG1595	DNA-templated transcription, initiation
CUJ84_RS31315	COG3964	amidohydrolase
CUJ84_RS31360	COG3119	arylsulfatase activity
CUJ84_RS31385	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS31390	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS31395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS31425	COG0352	thiamine-phosphate diphosphorylase activity
CUJ84_RS31460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS31480	COG0747	negative chemotaxis
CUJ84_RS31485	COG0601	transmembrane transport
CUJ84_RS31500	COG1921	L-seryl-tRNASec selenium transferase activity
CUJ84_RS31505	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS31520	COG3257	ureidoglycine aminohydrolase activity
CUJ84_RS31550	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CUJ84_RS31550	COG1017	nitric oxide dioxygenase activity
CUJ84_RS31555	COG3663	DNA glycosylase
CUJ84_RS31570	COG1473	amidohydrolase
CUJ84_RS31585	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS31590	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS31595	COG0601	transmembrane transport
CUJ84_RS31600	COG0583	DNA-binding transcription factor activity
CUJ84_RS31620	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS31630	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS31640	COG3842	ATPase activity
CUJ84_RS31670	COG1737	Transcriptional regulator
CUJ84_RS31700	COG3321	synthase
CUJ84_RS31700	COG0604	alcohol dehydrogenase
CUJ84_RS31705	COG0300	oxidoreductase activity
CUJ84_RS31725	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS31730	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS31735	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS31740	COG0601	transmembrane transport
CUJ84_RS31760	COG3459	Glycosyltransferase 36 associated
CUJ84_RS31765	COG2186	Transcriptional regulator
CUJ84_RS31770	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS31775	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
CUJ84_RS31795	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS31800	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CUJ84_RS31805	COG0596	Alpha beta hydrolase
CUJ84_RS31820	COG0667	Aldo Keto reductase
CUJ84_RS31830	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ84_RS31835	COG1278	Cold shock
CUJ84_RS31855	COG2894	cell division
CUJ84_RS31860	COG0850	regulation of cytokinetic process
CUJ84_RS31865	COG0840	transmembrane signaling receptor activity
CUJ84_RS31880	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CUJ84_RS31890	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ84_RS31905	COG0069	glutamate synthase activity
CUJ84_RS31910	COG2218	PFAM glutamate synthase alpha subunit domain protein
CUJ84_RS31915	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CUJ84_RS31925	COG4977	sequence-specific DNA binding
CUJ84_RS31930	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS31935	COG4311	Sarcosine oxidase, delta subunit
CUJ84_RS31940	COG0446	pyridine nucleotide-disulphide oxidoreductase
CUJ84_RS31940	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ84_RS32070	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS32075	COG2267	carboxylic ester hydrolase activity
CUJ84_RS32080	COG4106	trans-aconitate 2-methyltransferase activity
CUJ84_RS32090	COG0823	Involved in the tonB-independent uptake of proteins
CUJ84_RS32090	COG1506	peptidase
CUJ84_RS32095	COG0583	DNA-binding transcription factor activity
CUJ84_RS32125	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ84_RS32190	COG4948	Mandelate Racemase Muconate Lactonizing
CUJ84_RS32195	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS32210	COG1396	sequence-specific DNA binding
CUJ84_RS32250	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CUJ84_RS32255	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CUJ84_RS32265	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
CUJ84_RS32285	COG1609	Transcriptional regulator
CUJ84_RS32340	COG1475	DNA binding
CUJ84_RS32345	COG0640	Transcriptional regulator
CUJ84_RS32355	COG1278	Cold shock
CUJ84_RS32365	COG4467	Involved in initiation control of chromosome replication
CUJ84_RS32420	COG0419	ATPase involved in DNA repair
CUJ84_RS32505	COG1278	Cold shock
CUJ84_RS32590	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CUJ84_RS32620	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CUJ84_RS32625	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CUJ84_RS32645	COG0411	ABC transporter
CUJ84_RS32665	COG3485	protocatechuate 3,4-dioxygenase
CUJ84_RS32690	COG0765	amino acid transport
CUJ84_RS32695	COG4597	amino acid ABC transporter
CUJ84_RS32700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS32715	COG0583	DNA-binding transcription factor activity
CUJ84_RS32725	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS32735	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CUJ84_RS32750	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS32760	COG2076	Multidrug Resistance protein
CUJ84_RS32765	COG0626	cystathionine gamma-synthase activity
CUJ84_RS32780	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS32815	COG0477	Major facilitator Superfamily
CUJ84_RS32820	COG0523	cobalamin synthesis protein
CUJ84_RS32860	COG4977	sequence-specific DNA binding
CUJ84_RS32955	COG2205	protein histidine kinase activity
CUJ84_RS32975	COG1349	DNA-binding transcription factor activity
CUJ84_RS33015	COG0367	asparagine synthase
CUJ84_RS33015	COG0367	asparagine synthase
CUJ84_RS33040	COG3300	MHYT domain
CUJ84_RS33040	COG5001	Diguanylate cyclase
CUJ84_RS33050	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CUJ84_RS33080	COG1192	Involved in chromosome partitioning
CUJ84_RS33110	COG4467	Involved in initiation control of chromosome replication
CUJ84_RS33125	COG2124	cytochrome p450
CUJ84_RS33135	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CUJ84_RS33155	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS33165	COG2963	transposase activity
CUJ84_RS33170	COG3436	PFAM IS66 Orf2 family protein
CUJ84_RS33180	COG4372	Transposase
CUJ84_RS33205	COG5642	Protein of unknown function (DUF2384)
CUJ84_RS33210	COG5654	RES domain protein
CUJ84_RS33225	COG1074	ATP-dependent DNA helicase activity
CUJ84_RS33265	COG3291	Pkd domain containing protein
CUJ84_RS33285	COG4372	Transposase
CUJ84_RS33305	COG1278	Cold shock
CUJ84_RS33390	COG3161	chorismate lyase activity
CUJ84_RS33410	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CUJ84_RS33430	COG4571	Outer membrane protease
CUJ84_RS33530	COG0527	aspartate kinase activity
CUJ84_RS33535	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CUJ84_RS33540	COG3383	formate dehydrogenase (NAD+) activity
CUJ84_RS33550	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
CUJ84_RS33555	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
CUJ84_RS33560	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
CUJ84_RS33565	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
CUJ84_RS33585	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CUJ84_RS33595	COG2771	luxR family
CUJ84_RS33600	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUJ84_RS33610	COG0174	glutamine synthetase
CUJ84_RS33620	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS33625	COG0251	oxidation-reduction process
CUJ84_RS33655	COG1522	sequence-specific DNA binding
CUJ84_RS33660	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS33665	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS33675	COG2843	Capsule synthesis protein
CUJ84_RS33680	COG2963	transposase activity
CUJ84_RS33690	COG4372	Transposase
CUJ84_RS33695	COG1473	amidohydrolase
CUJ84_RS33700	COG0583	DNA-binding transcription factor activity
CUJ84_RS33710	COG0006	proline dipeptidase activity
CUJ84_RS33730	COG0006	proline dipeptidase activity
CUJ84_RS33735	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS33750	COG1473	amidohydrolase
CUJ84_RS33755	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS33760	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS33765	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS33770	COG0601	transmembrane transport
CUJ84_RS33775	COG0747	negative chemotaxis
CUJ84_RS33780	COG1770	oligopeptidase
CUJ84_RS33785	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUJ84_RS33815	COG0583	DNA-binding transcription factor activity
CUJ84_RS33820	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
CUJ84_RS33830	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CUJ84_RS33835	COG0183	Belongs to the thiolase family
CUJ84_RS33860	COG3842	ATPase activity
CUJ84_RS33865	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS33880	COG4372	Transposase
CUJ84_RS33900	COG2801	Transposase and inactivated derivatives
CUJ84_RS33910	COG3547	Transposase (IS116 IS110 IS902 family)
CUJ84_RS33925	COG1509	lysine 2,3-aminomutase activity
CUJ84_RS33940	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CUJ84_RS33945	COG2801	Transposase and inactivated derivatives
CUJ84_RS33955	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUJ84_RS33960	COG1509	lysine 2,3-aminomutase activity
CUJ84_RS33965	COG1181	Belongs to the D-alanine--D-alanine ligase family
CUJ84_RS33995	COG0006	proline dipeptidase activity
CUJ84_RS34005	COG1473	amidohydrolase
CUJ84_RS34015	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CUJ84_RS34025	COG2963	transposase activity
CUJ84_RS34035	COG4372	Transposase
CUJ84_RS34080	COG0436	Aminotransferase
CUJ84_RS34085	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CUJ84_RS34095	COG2086	electron transfer activity
CUJ84_RS34100	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CUJ84_RS34125	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CUJ84_RS34130	COG5554	nitrogen fixation
CUJ84_RS34145	COG4372	Transposase
CUJ84_RS34175	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CUJ84_RS34180	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS34280	COG0612	Peptidase, M16
CUJ84_RS34285	COG0612	Peptidase, M16
CUJ84_RS34300	COG1396	sequence-specific DNA binding
CUJ84_RS34390	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
CUJ84_RS34470	COG0251	oxidation-reduction process
CUJ84_RS34510	COG0584	glycerophosphoryl diester phosphodiesterase
CUJ84_RS34520	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CUJ84_RS34545	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CUJ84_RS34545	COG1024	Enoyl-CoA hydratase
CUJ84_RS34650	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS34665	COG1940	carbohydrate kinase activity
CUJ84_RS34670	COG1940	carbohydrate kinase activity
CUJ84_RS34675	COG1840	ABC-type Fe3 transport system, periplasmic component
CUJ84_RS34680	COG3842	ATPase activity
CUJ84_RS34685	COG1178	ABC-type Fe3 transport system permease component
CUJ84_RS34690	COG1082	Xylose isomerase domain protein TIM barrel
CUJ84_RS34725	COG2971	BadF BadG BcrA BcrD
CUJ84_RS34730	COG2188	Transcriptional regulator
CUJ84_RS34760	COG1475	DNA binding
CUJ84_RS34780	COG5489	Protein of unknown function (DUF736)
CUJ84_RS34795	COG3831	ATPase activity
CUJ84_RS34825	COG3505	Type IV secretory pathway VirD4
CUJ84_RS34840	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CUJ84_RS34845	COG4959	Type IV secretory pathway protease TraF
CUJ84_RS34850	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUJ84_RS34885	COG2771	luxR family
CUJ84_RS34890	COG2948	multi-organism process
CUJ84_RS34900	COG3504	Conjugal transfer protein
CUJ84_RS34905	COG3701	Conjugal transfer protein
CUJ84_RS34910	COG3846	protein secretion by the type IV secretion system
CUJ84_RS34920	COG5314	conjugation
CUJ84_RS34925	COG3451	type IV secretory pathway VirB4
CUJ84_RS34930	COG5268	conjugation
CUJ84_RS34935	COG3838	Conjugal transfer protein Trbc
CUJ84_RS34940	COG4962	Type ii secretion system protein e
CUJ84_RS34945	COG3916	Acyl-homoserine-lactone synthase
CUJ84_RS34950	COG1192	Involved in chromosome partitioning
CUJ84_RS34955	COG1475	DNA binding
CUJ84_RS34975	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CUJ84_RS34985	COG1472	Belongs to the glycosyl hydrolase 3 family
CUJ84_RS34990	COG1846	Transcriptional regulator
CUJ84_RS35000	COG3842	ATPase activity
CUJ84_RS35005	COG1177	transmembrane transport
CUJ84_RS35010	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS35015	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CUJ84_RS35030	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
CUJ84_RS35035	COG2010	Cytochrome c
CUJ84_RS35035	COG1529	Aldehyde oxidase and xanthine dehydrogenase
CUJ84_RS35040	COG2080	2 iron, 2 sulfur cluster binding
CUJ84_RS35045	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CUJ84_RS35050	COG0596	Alpha beta hydrolase
CUJ84_RS35055	COG3473	Maleate cis-trans isomerase
CUJ84_RS35060	COG1335	isochorismatase
CUJ84_RS35065	COG2309	aminopeptidase activity
CUJ84_RS35070	COG0477	Major facilitator Superfamily
CUJ84_RS35075	COG1846	Transcriptional regulator
CUJ84_RS35080	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CUJ84_RS35110	COG1574	metal-dependent hydrolase with the TIM-barrel fold
CUJ84_RS35125	COG0346	lactoylglutathione lyase activity
CUJ84_RS35130	COG0583	DNA-binding transcription factor activity
CUJ84_RS35135	COG2814	Major facilitator Superfamily
CUJ84_RS35150	COG1162	GTPase activity
CUJ84_RS35185	COG1349	DNA-binding transcription factor activity
CUJ84_RS35200	COG2072	flavoprotein involved in K transport
CUJ84_RS35215	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS35225	COG1335	isochorismatase
CUJ84_RS35240	COG0434	BtpA family
CUJ84_RS35245	COG1070	Carbohydrate kinase
CUJ84_RS35270	COG1609	Transcriptional regulator
CUJ84_RS35275	COG1653	transport
CUJ84_RS35280	COG1175	transmembrane transport
CUJ84_RS35285	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS35295	COG3842	ATPase activity
CUJ84_RS35320	COG0477	Major facilitator Superfamily
CUJ84_RS35325	COG0583	DNA-binding transcription factor activity
CUJ84_RS35330	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS35335	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CUJ84_RS35340	COG3206	protein involved in exopolysaccharide biosynthesis
CUJ84_RS35340	COG0489	protein tyrosine kinase activity
CUJ84_RS35345	COG0297	glycogen (starch) synthase activity
CUJ84_RS35355	COG1215	transferase activity, transferring glycosyl groups
CUJ84_RS35385	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS35390	COG1442	glycosyl transferase family 8
CUJ84_RS35400	COG2197	response regulator
CUJ84_RS35410	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS35425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CUJ84_RS35430	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CUJ84_RS35450	COG0523	cobalamin synthesis protein
CUJ84_RS35460	COG0523	cobalamin synthesis protein
CUJ84_RS35470	COG2274	protein secretion by the type I secretion system
CUJ84_RS35480	COG0579	oxidoreductase
CUJ84_RS35490	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
CUJ84_RS35515	COG2207	Transcriptional regulator
CUJ84_RS35525	COG1129	ABC transporter
CUJ84_RS35530	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS35550	COG1396	sequence-specific DNA binding
CUJ84_RS35555	COG2223	nitrite transmembrane transporter activity
CUJ84_RS35565	COG1464	Belongs to the NlpA lipoprotein family
CUJ84_RS35575	COG2011	ABC-type metal ion transport system permease component
CUJ84_RS35585	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CUJ84_RS35585	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CUJ84_RS35600	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS35630	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CUJ84_RS35660	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS35680	COG1294	oxidase, subunit
CUJ84_RS35685	COG1271	oxidase subunit
CUJ84_RS35690	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CUJ84_RS35695	COG4988	ABC transporter
CUJ84_RS35710	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ84_RS35720	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CUJ84_RS35730	COG1175	transmembrane transport
CUJ84_RS35735	COG3833	ABC-type maltose transport systems, permease component
CUJ84_RS35740	COG3842	ATPase activity
CUJ84_RS35745	COG0584	glycerophosphoryl diester phosphodiesterase
CUJ84_RS35750	COG1609	Transcriptional regulator
CUJ84_RS35760	COG3706	GGDEF domain
CUJ84_RS35770	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CUJ84_RS35780	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS35785	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS35795	COG0747	negative chemotaxis
CUJ84_RS35805	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS35810	COG1129	ABC transporter
CUJ84_RS35815	COG4213	ABC transporter substrate-binding protein
CUJ84_RS35835	COG1609	Transcriptional regulator
CUJ84_RS35840	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS35855	COG1175	transmembrane transport
CUJ84_RS35860	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS35870	COG1609	Transcriptional regulator
CUJ84_RS35875	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS35880	COG1129	ABC transporter
CUJ84_RS35885	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS35920	COG3842	ATPase activity
CUJ84_RS35930	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS35940	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CUJ84_RS35950	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS35960	COG0402	S-adenosylhomocysteine deaminase activity
CUJ84_RS35965	COG1079	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS35975	COG3845	ABC transporter
CUJ84_RS36000	COG4589	Belongs to the CDS family
CUJ84_RS36030	COG3609	addiction module antidote protein, CC2985 family
CUJ84_RS36035	COG0625	glutathione transferase activity
CUJ84_RS36045	COG4172	Belongs to the ABC transporter superfamily
CUJ84_RS36050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS36055	COG0601	transmembrane transport
CUJ84_RS36060	COG0596	Alpha beta hydrolase
CUJ84_RS36095	COG1120	ATPase activity
CUJ84_RS36115	COG4774	siderophore transport
CUJ84_RS36135	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CUJ84_RS36140	COG2323	membrane
CUJ84_RS36145	COG2186	Transcriptional regulator
CUJ84_RS36155	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS36160	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS36165	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS36170	COG0601	transmembrane transport
CUJ84_RS36175	COG0747	negative chemotaxis
CUJ84_RS36180	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS36190	COG1454	alcohol dehydrogenase
CUJ84_RS36195	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CUJ84_RS36210	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CUJ84_RS36215	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS36220	COG1116	anion transmembrane transporter activity
CUJ84_RS36245	COG1129	ABC transporter
CUJ84_RS36250	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS36255	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS36260	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CUJ84_RS36275	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS36290	COG3842	ATPase activity
CUJ84_RS36305	COG0697	spore germination
CUJ84_RS36355	COG0488	(ABC) transporter
CUJ84_RS36390	COG1802	Transcriptional regulator
CUJ84_RS36415	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CUJ84_RS36425	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS36430	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
CUJ84_RS36435	COG1609	Transcriptional regulator
CUJ84_RS36440	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS36445	COG1129	ABC transporter
CUJ84_RS36460	COG3831	ATPase activity
CUJ84_RS36495	COG1192	Involved in chromosome partitioning
CUJ84_RS36500	COG1475	DNA binding
CUJ84_RS36505	COG1414	Transcriptional regulator
CUJ84_RS36510	COG3668	Plasmid stabilization system
CUJ84_RS36520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS36525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS36530	COG1473	amidohydrolase
CUJ84_RS36540	COG1126	abc transporter atp-binding protein
CUJ84_RS36545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS36555	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS36590	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS36600	COG4521	taurine ABC transporter
CUJ84_RS36630	COG0596	Alpha beta hydrolase
CUJ84_RS36635	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CUJ84_RS36660	COG2267	carboxylic ester hydrolase activity
CUJ84_RS36670	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS36675	COG1012	belongs to the aldehyde dehydrogenase family
CUJ84_RS36695	COG1177	transmembrane transport
CUJ84_RS36700	COG3842	ATPase activity
CUJ84_RS36715	COG0251	oxidation-reduction process
CUJ84_RS36725	COG1176	ABC-type spermidine putrescine transport system, permease component I
CUJ84_RS36735	COG3842	ATPase activity
CUJ84_RS36740	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CUJ84_RS36745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CUJ84_RS36760	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS36765	COG1175	transmembrane transport
CUJ84_RS36775	COG3250	beta-galactosidase activity
CUJ84_RS36780	COG1609	Transcriptional regulator
CUJ84_RS36790	COG1653	transport
CUJ84_RS36795	COG1175	transmembrane transport
CUJ84_RS36800	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS36810	COG3842	ATPase activity
CUJ84_RS36815	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CUJ84_RS36845	COG1609	Transcriptional regulator
CUJ84_RS36850	COG0747	negative chemotaxis
CUJ84_RS36855	COG0601	transmembrane transport
CUJ84_RS36860	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS36865	COG0444	Belongs to the ABC transporter superfamily
CUJ84_RS36870	COG4608	Belongs to the ABC transporter superfamily
CUJ84_RS36875	COG3718	enzyme involved in inositol metabolism
CUJ84_RS36890	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ84_RS36910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CUJ84_RS36915	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS36920	COG2205	protein histidine kinase activity
CUJ84_RS36930	COG2301	Belongs to the HpcH HpaI aldolase family
CUJ84_RS36935	COG2030	dehydratase
CUJ84_RS36945	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
CUJ84_RS36950	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS36965	COG0183	Belongs to the thiolase family
CUJ84_RS36970	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS36980	COG0022	dehydrogenase e1 component
CUJ84_RS37040	COG0625	glutathione transferase activity
CUJ84_RS37055	COG3845	ABC transporter
CUJ84_RS37060	COG4603	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS37075	COG1392	Phosphate transport regulator
CUJ84_RS37080	COG0306	phosphate transporter
CUJ84_RS37085	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CUJ84_RS37090	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS37095	COG1116	anion transmembrane transporter activity
CUJ84_RS37120	COG1079	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS37125	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CUJ84_RS37130	COG1335	isochorismatase
CUJ84_RS37140	COG3845	ABC transporter
CUJ84_RS37145	COG1335	isochorismatase
CUJ84_RS37155	COG1126	abc transporter atp-binding protein
CUJ84_RS37160	COG0765	amino acid transport
CUJ84_RS37165	COG0765	amino acid transport
CUJ84_RS37180	COG0583	DNA-binding transcription factor activity
CUJ84_RS37200	COG0436	Aminotransferase
CUJ84_RS37210	COG1335	isochorismatase
CUJ84_RS37215	COG5001	Diguanylate cyclase
CUJ84_RS37215	COG3300	MHYT domain
CUJ84_RS37220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS37235	COG0697	spore germination
CUJ84_RS37240	COG0583	DNA-binding transcription factor activity
CUJ84_RS37250	COG3246	L-lysine catabolic process to acetate
CUJ84_RS37255	COG1250	3-hydroxyacyl-CoA dehydrogenase
CUJ84_RS37255	COG0824	Thioesterase
CUJ84_RS37260	COG1960	acyl-CoA dehydrogenase activity
CUJ84_RS37270	COG1024	Enoyl-CoA hydratase
CUJ84_RS37275	COG0747	negative chemotaxis
CUJ84_RS37280	COG0601	transmembrane transport
CUJ84_RS37285	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CUJ84_RS37300	COG0657	acetylesterase activity
CUJ84_RS37310	COG2304	oxidoreductase activity
CUJ84_RS37320	COG1609	Transcriptional regulator
CUJ84_RS37325	COG1063	alcohol dehydrogenase
CUJ84_RS37330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CUJ84_RS37335	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS37340	COG3265	gluconokinase activity
CUJ84_RS37345	COG2084	Dehydrogenase
CUJ84_RS37350	COG1129	ABC transporter
CUJ84_RS37355	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS37375	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS37385	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS37390	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS37395	COG0840	transmembrane signaling receptor activity
CUJ84_RS37420	COG1522	sequence-specific DNA binding
CUJ84_RS37430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS37465	COG1116	anion transmembrane transporter activity
CUJ84_RS37475	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CUJ84_RS37480	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CUJ84_RS37490	COG1879	ABC-type sugar transport system periplasmic component
CUJ84_RS37495	COG1129	ABC transporter
CUJ84_RS37505	COG1172	Belongs to the binding-protein-dependent transport system permease family
CUJ84_RS37520	COG0251	oxidation-reduction process
CUJ84_RS37535	COG3962	Belongs to the TPP enzyme family
CUJ84_RS37545	COG1082	Xylose isomerase domain protein TIM barrel
CUJ84_RS37550	COG0673	inositol 2-dehydrogenase activity
CUJ84_RS37555	COG1082	Xylose isomerase domain protein TIM barrel
CUJ84_RS37580	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CUJ84_RS37590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CUJ84_RS37595	COG1126	abc transporter atp-binding protein
CUJ84_RS37600	COG0765	amino acid transport
CUJ84_RS37605	COG0765	amino acid transport
CUJ84_RS37610	COG4221	oxidoreductase activity
CUJ84_RS37620	COG0436	Aminotransferase
CUJ84_RS37625	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
CUJ84_RS37630	COG1984	allophanate hydrolase subunit 2
CUJ84_RS37645	COG0439	Biotin carboxylase
CUJ84_RS37650	COG0511	ligase activity, forming carbon-carbon bonds
CUJ84_RS37690	COG1175	transmembrane transport
CUJ84_RS37695	COG0395	ABC-type sugar transport system, permease component
CUJ84_RS37700	COG3842	ATPase activity
CUJ84_RS37715	COG0667	Aldo Keto reductase
CUJ84_RS37720	COG0583	DNA-binding transcription factor activity
CUJ84_RS37735	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CUJ84_RS37765	COG0745	RESPONSE REGULATOR receiver
CUJ84_RS37770	COG2205	protein histidine kinase activity
CUJ84_RS37775	COG1309	transcriptional regulator
CUJ84_RS37785	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CUJ84_RS37790	COG1028	Short-chain dehydrogenase reductase Sdr
CUJ84_RS37795	COG1877	trehalose-phosphatase activity