CUJ84_RS00015 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS00070 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS00080 SM01091 Transporter associated domain CUJ84_RS00095 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS00110 SM00563 Phosphate acyltransferases CUJ84_RS00130 SM00932 Scaffold protein Nfu/NifU N terminal CUJ84_RS00160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS00170 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CUJ84_RS00170 SM00534 ATPase domain of DNA mismatch repair MUTS family CUJ84_RS00175 SM00919 Malic enzyme, NAD binding domain CUJ84_RS00175 SM01274 CUJ84_RS00175 CUJ84_RS00180 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS00190 SM00387 Histidine kinase-like ATPases CUJ84_RS00190 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS00190 SM00448 cheY-homologous receiver domain CUJ84_RS00200 SM00967 RNA 2'-O ribose methyltransferase substrate binding CUJ84_RS00230 SM00411 bacterial (prokaryotic) histone like domain CUJ84_RS00250 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS00345 SM00054 EF-hand, calcium binding motif CUJ84_RS00355 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS00385 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CUJ84_RS00390 SM00387 Histidine kinase-like ATPases CUJ84_RS00390 SM00911 HWE histidine kinase CUJ84_RS00405 SM00357 Cold shock protein domain CUJ84_RS00430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS00430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS00440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS00440 SM00387 Histidine kinase-like ATPases CUJ84_RS00575 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS00575 SM00267 diguanylate cyclase CUJ84_RS00585 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS00620 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00635 SM00267 diguanylate cyclase CUJ84_RS00710 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00740 SM00465 GIY-YIG type nucleases (URI domain) CUJ84_RS00745 SM00829 Enoylreductase CUJ84_RS00755 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00775 SM00858 CUJ84_RS00775 CUJ84_RS00780 SM00895 CUJ84_RS00780 CUJ84_RS00785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00790 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS00835 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00840 SM00857 Resolvase, N terminal domain CUJ84_RS00880 SM00387 Histidine kinase-like ATPases CUJ84_RS00880 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS00905 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS00915 SM00448 cheY-homologous receiver domain CUJ84_RS00915 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS00920 SM00465 GIY-YIG type nucleases (URI domain) CUJ84_RS00990 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS01050 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS01065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS01065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS01070 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS01090 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS01090 SM00448 cheY-homologous receiver domain CUJ84_RS01125 SM00028 Tetratricopeptide repeats CUJ84_RS01150 SM00487 DEAD-like helicases superfamily CUJ84_RS01150 SM00490 helicase superfamily c-terminal domain CUJ84_RS01180 SM00671 Sel1-like repeats. CUJ84_RS01215 SM00357 Cold shock protein domain CUJ84_RS01220 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS01245 SM00387 Histidine kinase-like ATPases CUJ84_RS01245 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS01245 SM00448 cheY-homologous receiver domain CUJ84_RS01265 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS01265 SM00267 diguanylate cyclase CUJ84_RS01335 SM00226 Low molecular weight phosphatase family CUJ84_RS01375 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS01400 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS01415 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS01470 SM01133 CUJ84_RS01470 CUJ84_RS01490 SM00822 CUJ84_RS01490 CUJ84_RS01495 SM00829 Enoylreductase CUJ84_RS01500 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS01535 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS01575 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CUJ84_RS01585 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CUJ84_RS01620 SM00387 Histidine kinase-like ATPases CUJ84_RS01620 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS01620 SM00448 cheY-homologous receiver domain CUJ84_RS01625 SM00448 cheY-homologous receiver domain CUJ84_RS01630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS01630 SM00091 PAS domain CUJ84_RS01630 SM00387 Histidine kinase-like ATPases CUJ84_RS01630 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS01635 SM00448 cheY-homologous receiver domain CUJ84_RS01640 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS01650 SM00387 Histidine kinase-like ATPases CUJ84_RS01650 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS01680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS01690 SM00448 cheY-homologous receiver domain CUJ84_RS01695 SM00073 Histidine Phosphotransfer domain CUJ84_RS01695 SM00260 Two component signalling adaptor domain CUJ84_RS01695 SM00387 Histidine kinase-like ATPases CUJ84_RS01695 SM01231 CUJ84_RS01695 CUJ84_RS01700 SM00260 Two component signalling adaptor domain CUJ84_RS01705 SM00138 Methyltransferase, chemotaxis proteins CUJ84_RS01710 SM00448 cheY-homologous receiver domain CUJ84_RS01715 SM00448 cheY-homologous receiver domain CUJ84_RS01735 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS01740 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS01785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS01815 SM00858 CUJ84_RS01815 CUJ84_RS01900 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS01990 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS02010 SM00642 Alpha-amylase domain CUJ84_RS02015 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS02045 SM01230 CUJ84_RS02045 CUJ84_RS02055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS02055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS02060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS02060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS02085 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS02095 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS02120 SM00091 PAS domain CUJ84_RS02120 SM00387 Histidine kinase-like ATPases CUJ84_RS02120 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS02140 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain CUJ84_RS02195 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS02200 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS02225 SM00028 Tetratricopeptide repeats CUJ84_RS02400 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS02410 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS02410 SM01240 CUJ84_RS02410 CUJ84_RS02470 SM00996 S-adenosyl-L-homocysteine hydrolase CUJ84_RS02470 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CUJ84_RS02475 SM00829 Enoylreductase CUJ84_RS02525 SM00112 Cadherin repeats. CUJ84_RS02620 SM00883 Chaperonin 10 Kd subunit CUJ84_RS02630 SM00904 Riboflavin kinase CUJ84_RS02655 SM00363 S4 RNA-binding domain CUJ84_RS02720 SM00853 MutL C terminal dimerisation domain CUJ84_RS02720 SM01340 CUJ84_RS02720 CUJ84_RS02725 SM00091 PAS domain CUJ84_RS02725 SM00448 cheY-homologous receiver domain CUJ84_RS02730 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS02730 SM00267 diguanylate cyclase CUJ84_RS02760 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS02765 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS02825 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS02840 SM00852 Probable molybdopterin binding domain CUJ84_RS02850 SM00028 Tetratricopeptide repeats CUJ84_RS02910 SM01209 CUJ84_RS02910 CUJ84_RS02910 SM01210 CUJ84_RS02910 CUJ84_RS02920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS02920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS02920 SM01049 CUJ84_RS02920 CUJ84_RS02935 SM00316 Ribosomal protein S1-like RNA-binding domain CUJ84_RS02935 SM00732 Likely ribonuclease with RNase H fold. CUJ84_RS02945 SM00855 Phosphoglycerate mutase family CUJ84_RS03025 SM00363 S4 RNA-binding domain CUJ84_RS03035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS03035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS03040 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS03075 SM00903 Flavin reductase like domain CUJ84_RS03100 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS03105 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS03120 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS03120 SM00895 CUJ84_RS03120 CUJ84_RS03140 SM00091 PAS domain CUJ84_RS03140 SM00387 Histidine kinase-like ATPases CUJ84_RS03140 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS03165 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS03190 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS03190 SM00267 diguanylate cyclase CUJ84_RS03190 SM01079 CUJ84_RS03190 CUJ84_RS03205 SM00855 Phosphoglycerate mutase family CUJ84_RS03215 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS03405 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS03410 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS03425 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS03440 SM00886 Stress responsive A/B Barrel Domain CUJ84_RS03455 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS03455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS03455 SM00267 diguanylate cyclase CUJ84_RS03495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS03495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS03520 SM00869 Autotransporter beta-domain CUJ84_RS03525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS03560 SM00478 endonuclease III CUJ84_RS03635 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS03690 SM00563 Phosphate acyltransferases CUJ84_RS03730 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS03800 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS03820 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS03875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS03875 SM00387 Histidine kinase-like ATPases CUJ84_RS03875 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS03880 SM00448 cheY-homologous receiver domain CUJ84_RS03880 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS03925 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS03950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS03955 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS04025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS04090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS04095 SM00822 CUJ84_RS04095 CUJ84_RS04100 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS04115 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS04175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS04250 SM01007 Class II Aldolase and Adducin N-terminal domain CUJ84_RS04260 SM00448 cheY-homologous receiver domain CUJ84_RS04265 SM00387 Histidine kinase-like ATPases CUJ84_RS04290 SM00829 Enoylreductase CUJ84_RS04330 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS04420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS04425 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS04500 SM00829 Enoylreductase CUJ84_RS04585 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS04585 SM00267 diguanylate cyclase CUJ84_RS04590 SM00829 Enoylreductase CUJ84_RS04630 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS04630 SM01134 CUJ84_RS04630 CUJ84_RS04665 SM00710 Parallel beta-helix repeats CUJ84_RS04670 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS04670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS04670 SM00267 diguanylate cyclase CUJ84_RS04725 SM00357 Cold shock protein domain CUJ84_RS04745 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS04755 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS04775 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS04785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS04820 SM01091 Transporter associated domain CUJ84_RS04825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS04825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS04910 SM00829 Enoylreductase CUJ84_RS04940 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS05055 SM00564 beta-propeller repeat CUJ84_RS05210 SM00387 Histidine kinase-like ATPases CUJ84_RS05210 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS05230 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS05240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS05320 SM00460 Transglutaminase/protease-like homologues CUJ84_RS05345 SM00883 Chaperonin 10 Kd subunit CUJ84_RS05375 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS05380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS05385 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS05395 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS05435 SM00886 Stress responsive A/B Barrel Domain CUJ84_RS05450 SM00448 cheY-homologous receiver domain CUJ84_RS05450 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS05455 SM00387 Histidine kinase-like ATPases CUJ84_RS05455 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS05490 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS05495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS05500 SM00448 cheY-homologous receiver domain CUJ84_RS05500 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS05505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS05505 SM00387 Histidine kinase-like ATPases CUJ84_RS05505 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS05520 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS05520 SM00387 Histidine kinase-like ATPases CUJ84_RS05520 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS05555 SM00986 Uracil DNA glycosylase superfamily CUJ84_RS05555 SM00987 UreE urease accessory protein, C-terminal domain CUJ84_RS05600 SM00344 helix_turn_helix ASNC type CUJ84_RS05605 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS05605 SM00924 MgtE intracellular N domain CUJ84_RS05610 SM00829 Enoylreductase CUJ84_RS05625 SM00046 Diacylglycerol kinase catalytic domain (presumed) CUJ84_RS05630 SM01230 CUJ84_RS05630 CUJ84_RS05770 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS05835 SM01130 CUJ84_RS05835 CUJ84_RS05850 SM01409 CUJ84_RS05850 CUJ84_RS05855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS05855 SM00954 Region found in RelA / SpoT proteins CUJ84_RS05880 SM00358 Double-stranded RNA binding motif CUJ84_RS05880 SM00535 Ribonuclease III family CUJ84_RS05890 SM00419 helix_turn_helix, cAMP Regulatory protein CUJ84_RS05895 SM00448 cheY-homologous receiver domain CUJ84_RS05915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS05920 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS05920 SM00267 diguanylate cyclase CUJ84_RS05995 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS06015 SM00917 LeuA allosteric (dimerisation) domain CUJ84_RS06050 SM00641 Glycosyl hydrolases family 25 CUJ84_RS06070 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS06085 SM01005 Alanine racemase, C-terminal domain CUJ84_RS06090 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS06125 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CUJ84_RS06130 SM00822 CUJ84_RS06130 CUJ84_RS06135 SM00823 Phosphopantetheine attachment site CUJ84_RS06140 SM00825 Beta-ketoacyl synthase CUJ84_RS06155 SM00072 Guanylate kinase homologues. CUJ84_RS06160 SM00650 Ribosomal RNA adenine dimethylases CUJ84_RS06190 SM00014 Acid phosphatase homologues CUJ84_RS06225 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS06230 SM00267 diguanylate cyclase CUJ84_RS06245 SM00562 CUJ84_RS06245 CUJ84_RS06285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CUJ84_RS06285 SM00465 GIY-YIG type nucleases (URI domain) CUJ84_RS06310 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CUJ84_RS06375 SM00474 3'-5' exonuclease CUJ84_RS06410 SM00434 DNA Topoisomerase IV CUJ84_RS06425 SM00966 SpoVT / AbrB like domain CUJ84_RS06445 SM01004 Delta-aminolevulinic acid dehydratase CUJ84_RS06455 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS06570 SM00411 bacterial (prokaryotic) histone like domain CUJ84_RS06575 SM00422 helix_turn_helix, mercury resistance CUJ84_RS06580 SM00448 cheY-homologous receiver domain CUJ84_RS06585 SM00387 Histidine kinase-like ATPases CUJ84_RS06585 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS06585 SM00448 cheY-homologous receiver domain CUJ84_RS06725 SM00859 Semialdehyde dehydrogenase, NAD binding domain CUJ84_RS06775 SM00881 CoA binding domain CUJ84_RS06790 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS06790 SM00267 diguanylate cyclase CUJ84_RS06805 SM00267 diguanylate cyclase CUJ84_RS06815 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS06815 SM00994 ClpX C4-type zinc finger CUJ84_RS06815 SM01086 C-terminal, D2-small domain, of ClpB protein CUJ84_RS06820 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS06820 SM00464 Found in ATP-dependent protease La (LON) CUJ84_RS06825 SM00411 bacterial (prokaryotic) histone like domain CUJ84_RS06925 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CUJ84_RS06935 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUJ84_RS06980 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS07005 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS07015 SM00481 DNA polymerase alpha chain like domain CUJ84_RS07045 SM00448 cheY-homologous receiver domain CUJ84_RS07050 SM00267 diguanylate cyclase CUJ84_RS07050 SM00448 cheY-homologous receiver domain CUJ84_RS07070 SM00316 Ribosomal protein S1-like RNA-binding domain CUJ84_RS07070 SM00955 CUJ84_RS07070 CUJ84_RS07075 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CUJ84_RS07075 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CUJ84_RS07075 SM00493 CUJ84_RS07075 CUJ84_RS07085 SM01207 CUJ84_RS07085 CUJ84_RS07115 SM00646 CUJ84_RS07115 CUJ84_RS07160 SM00967 RNA 2'-O ribose methyltransferase substrate binding CUJ84_RS07195 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CUJ84_RS07195 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CUJ84_RS07200 SM00649 Ribosomal protein L11/L12 CUJ84_RS07225 SM00663 RNA polymerase I subunit A N-terminus CUJ84_RS07245 SM00838 Elongation factor G C-terminus CUJ84_RS07245 SM00889 Elongation factor G, domain IV CUJ84_RS07255 SM01403 CUJ84_RS07255 CUJ84_RS07275 SM01382 CUJ84_RS07275 CUJ84_RS07275 SM01383 CUJ84_RS07275 CUJ84_RS07290 SM00322 K homology RNA-binding domain CUJ84_RS07310 SM01374 CUJ84_RS07310 CUJ84_RS07315 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CUJ84_RS07380 SM00662 RNA polymerases D CUJ84_RS07420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS07425 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS07465 SM00091 PAS domain CUJ84_RS07465 SM00387 Histidine kinase-like ATPases CUJ84_RS07465 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS07475 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS07480 SM00882 Coenzyme A transferase CUJ84_RS07510 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS07555 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS07555 SM00448 cheY-homologous receiver domain CUJ84_RS07610 SM00344 helix_turn_helix ASNC type CUJ84_RS07615 SM00344 helix_turn_helix ASNC type CUJ84_RS07675 SM00852 Probable molybdopterin binding domain CUJ84_RS07705 SM00267 diguanylate cyclase CUJ84_RS07715 SM00822 CUJ84_RS07715 CUJ84_RS07750 SM00344 helix_turn_helix ASNC type CUJ84_RS07755 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CUJ84_RS07755 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CUJ84_RS07775 SM00450 Rhodanese Homology Domain CUJ84_RS07780 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUJ84_RS07825 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CUJ84_RS07850 SM00448 cheY-homologous receiver domain CUJ84_RS07850 SM01012 CUJ84_RS07850 CUJ84_RS07860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS07925 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS07960 SM01060 CUJ84_RS07960 CUJ84_RS08065 SM00671 Sel1-like repeats. CUJ84_RS08080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS08085 SM00836 DALR anticodon binding domain CUJ84_RS08085 SM01016 Arginyl tRNA synthetase N terminal dom CUJ84_RS08140 SM00257 Lysin motif CUJ84_RS08150 SM01323 CUJ84_RS08150 CUJ84_RS08215 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS08250 SM00732 Likely ribonuclease with RNase H fold. CUJ84_RS08260 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS08300 SM00845 GatB domain CUJ84_RS08340 SM00878 Biotin carboxylase C-terminal domain CUJ84_RS08435 SM00357 Cold shock protein domain CUJ84_RS08475 SM00710 Parallel beta-helix repeats CUJ84_RS08525 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS08540 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS08565 SM00971 Serine acetyltransferase, N-terminal CUJ84_RS08585 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS08585 SM01086 C-terminal, D2-small domain, of ClpB protein CUJ84_RS08590 SM00886 Stress responsive A/B Barrel Domain CUJ84_RS08625 SM00327 von Willebrand factor (vWF) type A domain CUJ84_RS08670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS08745 SM01192 CUJ84_RS08745 CUJ84_RS08745 SM01193 CUJ84_RS08745 CUJ84_RS08760 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS08795 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS08830 SM00387 Histidine kinase-like ATPases CUJ84_RS08830 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS08835 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS08835 SM00448 cheY-homologous receiver domain CUJ84_RS08845 SM00091 PAS domain CUJ84_RS08845 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS08845 SM00387 Histidine kinase-like ATPases CUJ84_RS08845 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS08850 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS08850 SM00448 cheY-homologous receiver domain CUJ84_RS08915 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS08930 SM00822 CUJ84_RS08930 CUJ84_RS09020 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS09050 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS09090 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09115 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS09120 SM01130 CUJ84_RS09120 CUJ84_RS09130 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS09130 SM00895 CUJ84_RS09130 CUJ84_RS09150 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09155 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09160 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS09185 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09190 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CUJ84_RS09240 SM00822 CUJ84_RS09240 CUJ84_RS09245 SM00829 Enoylreductase CUJ84_RS09345 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09360 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS09360 SM00895 CUJ84_RS09360 CUJ84_RS09375 SM00829 Enoylreductase CUJ84_RS09380 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09410 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09425 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS09425 SM00895 CUJ84_RS09425 CUJ84_RS09445 SM00487 DEAD-like helicases superfamily CUJ84_RS09445 SM00490 helicase superfamily c-terminal domain CUJ84_RS09455 SM00487 DEAD-like helicases superfamily CUJ84_RS09455 SM00490 helicase superfamily c-terminal domain CUJ84_RS09455 SM00982 CUJ84_RS09455 CUJ84_RS09455 SM01058 CarD-like/TRCF domain CUJ84_RS09480 SM00992 Hemimethylated DNA-binding protein YccV like CUJ84_RS09485 SM01230 CUJ84_RS09485 CUJ84_RS09490 SM00938 Nitrogen regulatory protein P-II CUJ84_RS09535 SM00434 DNA Topoisomerase IV CUJ84_RS09590 SM00825 Beta-ketoacyl synthase CUJ84_RS09635 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09655 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS09670 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS09685 SM01207 CUJ84_RS09685 CUJ84_RS09690 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS09710 SM00028 Tetratricopeptide repeats CUJ84_RS09710 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS09720 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS09730 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS09780 SM00797 Allophanate hydrolase subunit 2 CUJ84_RS09785 SM00796 Allophanate hydrolase subunit 1 CUJ84_RS09825 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS09860 SM00936 Penicillin-binding protein 5, C-terminal domain CUJ84_RS09905 SM00460 Transglutaminase/protease-like homologues CUJ84_RS09910 SM00460 Transglutaminase/protease-like homologues CUJ84_RS09955 SM00852 Probable molybdopterin binding domain CUJ84_RS09980 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CUJ84_RS10005 SM00487 DEAD-like helicases superfamily CUJ84_RS10005 SM00490 helicase superfamily c-terminal domain CUJ84_RS10010 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS10010 SM01080 CUJ84_RS10010 CUJ84_RS10055 SM00387 Histidine kinase-like ATPases CUJ84_RS10055 SM00433 TopoisomeraseII CUJ84_RS10085 SM00903 Flavin reductase like domain CUJ84_RS10100 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUJ84_RS10115 SM01234 CUJ84_RS10115 CUJ84_RS10140 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS10230 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS10240 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS10260 SM00422 helix_turn_helix, mercury resistance CUJ84_RS10265 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS10265 SM00924 MgtE intracellular N domain CUJ84_RS10310 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS10315 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS10370 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS10370 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS10375 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS10375 SM00448 cheY-homologous receiver domain CUJ84_RS10410 SM00919 Malic enzyme, NAD binding domain CUJ84_RS10410 SM01274 CUJ84_RS10410 CUJ84_RS10455 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS10455 SM00448 cheY-homologous receiver domain CUJ84_RS10460 SM00448 cheY-homologous receiver domain CUJ84_RS10485 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS10510 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS10515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS10520 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS10525 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS10540 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS10540 SM00091 PAS domain CUJ84_RS10540 SM00220 Serine/Threonine protein kinases, catalytic domain CUJ84_RS10540 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS10540 SM00387 Histidine kinase-like ATPases CUJ84_RS10540 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS10645 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS10650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS10650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS10650 SM00220 Serine/Threonine protein kinases, catalytic domain CUJ84_RS10650 SM00387 Histidine kinase-like ATPases CUJ84_RS10650 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS10655 SM00822 CUJ84_RS10655 CUJ84_RS10675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS10675 SM00091 PAS domain CUJ84_RS10675 SM00387 Histidine kinase-like ATPases CUJ84_RS10675 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS10690 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS10700 SM00448 cheY-homologous receiver domain CUJ84_RS10700 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS10710 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS10725 SM00448 cheY-homologous receiver domain CUJ84_RS10730 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS10730 SM00448 cheY-homologous receiver domain CUJ84_RS10735 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS10735 SM00091 PAS domain CUJ84_RS10735 SM00387 Histidine kinase-like ATPases CUJ84_RS10735 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS10915 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS10920 SM00112 Cadherin repeats. CUJ84_RS10925 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS10960 SM00878 Biotin carboxylase C-terminal domain CUJ84_RS11065 SM00641 Glycosyl hydrolases family 25 CUJ84_RS11110 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11180 SM00487 DEAD-like helicases superfamily CUJ84_RS11180 SM00490 helicase superfamily c-terminal domain CUJ84_RS11195 SM00903 Flavin reductase like domain CUJ84_RS11220 SM00998 Adenylosuccinate lyase C-terminus CUJ84_RS11245 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS11245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS11245 SM00091 PAS domain CUJ84_RS11245 SM00267 diguanylate cyclase CUJ84_RS11265 SM01211 CUJ84_RS11265 CUJ84_RS11280 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS11355 SM00363 S4 RNA-binding domain CUJ84_RS11355 SM01390 CUJ84_RS11355 CUJ84_RS11360 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11385 SM01329 CUJ84_RS11385 CUJ84_RS11400 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS11400 SM00871 Bacterial transcription activator, effector binding domain CUJ84_RS11410 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CUJ84_RS11415 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11435 SM00091 PAS domain CUJ84_RS11435 SM00387 Histidine kinase-like ATPases CUJ84_RS11435 SM00448 cheY-homologous receiver domain CUJ84_RS11460 SM00855 Phosphoglycerate mutase family CUJ84_RS11485 SM00905 Dihydroneopterin aldolase CUJ84_RS11530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS11530 SM00267 diguanylate cyclase CUJ84_RS11545 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11555 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS11575 SM00855 Phosphoglycerate mutase family CUJ84_RS11605 SM00919 Malic enzyme, NAD binding domain CUJ84_RS11605 SM01274 CUJ84_RS11605 CUJ84_RS11630 SM00822 CUJ84_RS11630 CUJ84_RS11670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS11670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS11725 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11800 SM00267 diguanylate cyclase CUJ84_RS11815 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS11830 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS11850 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11865 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS11885 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11910 SM00822 CUJ84_RS11910 CUJ84_RS11930 SM00091 PAS domain CUJ84_RS11930 SM00387 Histidine kinase-like ATPases CUJ84_RS11930 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS11930 SM00448 cheY-homologous receiver domain CUJ84_RS11935 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS11970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS11970 SM00387 Histidine kinase-like ATPases CUJ84_RS11970 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS11975 SM00448 cheY-homologous receiver domain CUJ84_RS11975 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS12000 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS12000 SM01134 CUJ84_RS12000 CUJ84_RS12005 SM01133 CUJ84_RS12005 CUJ84_RS12020 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS12020 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUJ84_RS12045 SM00028 Tetratricopeptide repeats CUJ84_RS12055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS12085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS12090 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS12110 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS12145 SM00344 helix_turn_helix ASNC type CUJ84_RS12150 SM00986 Uracil DNA glycosylase superfamily CUJ84_RS12150 SM00987 UreE urease accessory protein, C-terminal domain CUJ84_RS12155 SM00318 Staphylococcal nuclease homologues CUJ84_RS12160 SM00387 Histidine kinase-like ATPases CUJ84_RS12160 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS12220 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS12250 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS12270 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS12320 SM01350 CUJ84_RS12320 CUJ84_RS12325 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS12350 SM00829 Enoylreductase CUJ84_RS12355 SM00825 Beta-ketoacyl synthase CUJ84_RS12375 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS12375 SM00419 helix_turn_helix, cAMP Regulatory protein CUJ84_RS12440 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS12460 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS12480 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS12485 SM00822 CUJ84_RS12485 CUJ84_RS12615 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS12620 SM00267 diguanylate cyclase CUJ84_RS12620 SM00448 cheY-homologous receiver domain CUJ84_RS12625 SM00448 cheY-homologous receiver domain CUJ84_RS12655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS12695 SM00387 Histidine kinase-like ATPases CUJ84_RS12695 SM00448 cheY-homologous receiver domain CUJ84_RS12730 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS12735 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS12740 SM01120 CUJ84_RS12740 CUJ84_RS12745 SM01120 CUJ84_RS12745 CUJ84_RS12810 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS12810 SM00895 CUJ84_RS12810 CUJ84_RS12850 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS12860 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS12865 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS12870 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS12915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS12915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS12915 SM01049 CUJ84_RS12915 CUJ84_RS13000 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS13030 SM00448 cheY-homologous receiver domain CUJ84_RS13040 SM00155 Phospholipase D. Active site motifs. CUJ84_RS13050 SM00248 ankyrin repeats CUJ84_RS13060 SM00028 Tetratricopeptide repeats CUJ84_RS13065 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS13110 SM00487 DEAD-like helicases superfamily CUJ84_RS13110 SM00490 helicase superfamily c-terminal domain CUJ84_RS13125 SM00357 Cold shock protein domain CUJ84_RS13135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS13175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS13175 SM00387 Histidine kinase-like ATPases CUJ84_RS13175 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS13180 SM00448 cheY-homologous receiver domain CUJ84_RS13180 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS13190 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS13255 SM00344 helix_turn_helix ASNC type CUJ84_RS13300 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS13315 SM00855 Phosphoglycerate mutase family CUJ84_RS13360 SM00226 Low molecular weight phosphatase family CUJ84_RS13405 SM00363 S4 RNA-binding domain CUJ84_RS13475 SM00710 Parallel beta-helix repeats CUJ84_RS13475 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CUJ84_RS13480 SM00710 Parallel beta-helix repeats CUJ84_RS13480 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CUJ84_RS13495 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS13505 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS13540 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS13595 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS13610 SM00671 Sel1-like repeats. CUJ84_RS13615 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS13625 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS13630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS13630 SM00911 HWE histidine kinase CUJ84_RS13635 SM00448 cheY-homologous receiver domain CUJ84_RS13675 SM00448 cheY-homologous receiver domain CUJ84_RS13675 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS13680 SM00387 Histidine kinase-like ATPases CUJ84_RS13695 SM00864 Tubulin/FtsZ family, GTPase domain CUJ84_RS13695 SM00865 Tubulin/FtsZ family, C-terminal domain CUJ84_RS13715 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS13785 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS13785 SM00267 diguanylate cyclase CUJ84_RS13800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS13800 SM00331 Sigma factor PP2C-like phosphatases CUJ84_RS13815 SM00344 helix_turn_helix ASNC type CUJ84_RS13855 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS13900 SM00479 CUJ84_RS13900 CUJ84_RS13910 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS13920 SM00448 cheY-homologous receiver domain CUJ84_RS13925 SM00387 Histidine kinase-like ATPases CUJ84_RS13925 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS13985 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS14005 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS14010 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS14075 SM00028 Tetratricopeptide repeats CUJ84_RS14080 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS14080 SM01080 CUJ84_RS14080 CUJ84_RS14145 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS14155 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS14175 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS14175 SM01091 Transporter associated domain CUJ84_RS14185 SM00450 Rhodanese Homology Domain CUJ84_RS14230 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS14320 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS14325 SM00829 Enoylreductase CUJ84_RS14335 SM00889 Elongation factor G, domain IV CUJ84_RS14345 SM00344 helix_turn_helix ASNC type CUJ84_RS14355 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS14390 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS14390 SM00422 helix_turn_helix, mercury resistance CUJ84_RS14420 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS14430 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS14510 SM01130 CUJ84_RS14510 CUJ84_RS14520 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS14535 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS14540 SM00244 prohibitin homologues CUJ84_RS14545 SM00244 prohibitin homologues CUJ84_RS14605 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS14645 SM00966 SpoVT / AbrB like domain CUJ84_RS14660 SM00763 PrkA AAA domain CUJ84_RS14680 SM00054 EF-hand, calcium binding motif CUJ84_RS14725 SM00260 Two component signalling adaptor domain CUJ84_RS14735 SM00479 CUJ84_RS14735 CUJ84_RS14745 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CUJ84_RS14745 SM00292 breast cancer carboxy-terminal domain CUJ84_RS14745 SM00532 Ligase N family CUJ84_RS14770 SM00864 Tubulin/FtsZ family, GTPase domain CUJ84_RS14770 SM00865 Tubulin/FtsZ family, C-terminal domain CUJ84_RS14775 SM00842 Cell division protein FtsA CUJ84_RS14885 SM00644 CUJ84_RS14885 CUJ84_RS14890 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS14925 SM00641 Glycosyl hydrolases family 25 CUJ84_RS14945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS14950 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15000 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS15010 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15030 SM01230 CUJ84_RS15030 CUJ84_RS15065 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15075 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15105 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS15105 SM00866 CUJ84_RS15105 CUJ84_RS15110 SM01018 B12 binding domain CUJ84_RS15130 SM00903 Flavin reductase like domain CUJ84_RS15155 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15160 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS15160 SM00895 CUJ84_RS15160 CUJ84_RS15195 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS15210 SM00448 cheY-homologous receiver domain CUJ84_RS15285 SM00419 helix_turn_helix, cAMP Regulatory protein CUJ84_RS15305 SM00873 B3/4 domain CUJ84_RS15315 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS15350 SM00829 Enoylreductase CUJ84_RS15365 SM00341 Helicase and RNase D C-terminal CUJ84_RS15365 SM00487 DEAD-like helicases superfamily CUJ84_RS15365 SM00490 helicase superfamily c-terminal domain CUJ84_RS15365 SM00956 CUJ84_RS15365 CUJ84_RS15370 SM00400 zinc finger CUJ84_RS15370 SM00493 CUJ84_RS15370 CUJ84_RS15390 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CUJ84_RS15430 SM00850 LytTr DNA-binding domain CUJ84_RS15435 SM00851 MGS-like domain CUJ84_RS15435 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUJ84_RS15440 SM00986 Uracil DNA glycosylase superfamily CUJ84_RS15440 SM00987 UreE urease accessory protein, C-terminal domain CUJ84_RS15445 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS15465 SM00387 Histidine kinase-like ATPases CUJ84_RS15465 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS15470 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15470 SM00448 cheY-homologous receiver domain CUJ84_RS15475 SM00344 helix_turn_helix ASNC type CUJ84_RS15490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS15550 SM00327 von Willebrand factor (vWF) type A domain CUJ84_RS15550 SM00609 Vault protein Inter-alpha-Trypsin domain CUJ84_RS15580 SM00357 Cold shock protein domain CUJ84_RS15590 SM00822 CUJ84_RS15590 CUJ84_RS15600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS15600 SM00387 Histidine kinase-like ATPases CUJ84_RS15600 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS15605 SM00448 cheY-homologous receiver domain CUJ84_RS15605 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS15610 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS15635 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS15685 SM01400 CUJ84_RS15685 CUJ84_RS15705 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS15705 SM00091 PAS domain CUJ84_RS15705 SM00267 diguanylate cyclase CUJ84_RS15705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS15710 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS15775 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS15895 SM00829 Enoylreductase CUJ84_RS15905 SM00917 LeuA allosteric (dimerisation) domain CUJ84_RS15985 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS16025 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS16035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS16045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS16060 SM00642 Alpha-amylase domain CUJ84_RS16080 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS16085 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS16105 SM01230 CUJ84_RS16105 CUJ84_RS16120 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS16195 SM01092 CO dehydrogenase flavoprotein C-terminal domain CUJ84_RS16200 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CUJ84_RS16275 SM00244 prohibitin homologues CUJ84_RS16335 SM00091 PAS domain CUJ84_RS16335 SM00387 Histidine kinase-like ATPases CUJ84_RS16335 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS16335 SM00448 cheY-homologous receiver domain CUJ84_RS16350 SM01130 CUJ84_RS16350 CUJ84_RS16355 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS16365 SM00487 DEAD-like helicases superfamily CUJ84_RS16365 SM00490 helicase superfamily c-terminal domain CUJ84_RS16385 SM00460 Transglutaminase/protease-like homologues CUJ84_RS16390 SM00448 cheY-homologous receiver domain CUJ84_RS16390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS16415 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS16460 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS16510 SM00448 cheY-homologous receiver domain CUJ84_RS16520 SM00034 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) CUJ84_RS16575 SM00028 Tetratricopeptide repeats CUJ84_RS16585 SM00248 ankyrin repeats CUJ84_RS16615 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS16650 SM00822 CUJ84_RS16650 CUJ84_RS16655 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS16670 SM00822 CUJ84_RS16670 CUJ84_RS16695 SM00829 Enoylreductase CUJ84_RS16705 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS16780 SM01329 CUJ84_RS16780 CUJ84_RS16870 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17010 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17050 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS17070 SM00633 Glycosyl hydrolase family 10 CUJ84_RS17150 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17155 SM00710 Parallel beta-helix repeats CUJ84_RS17155 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses CUJ84_RS17195 SM00984 UDP binding domain CUJ84_RS17225 SM00986 Uracil DNA glycosylase superfamily CUJ84_RS17225 SM00987 UreE urease accessory protein, C-terminal domain CUJ84_RS17265 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17290 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS17375 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17410 SM00448 cheY-homologous receiver domain CUJ84_RS17415 SM00911 HWE histidine kinase CUJ84_RS17430 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS17435 SM00450 Rhodanese Homology Domain CUJ84_RS17440 SM00829 Enoylreductase CUJ84_RS17455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS17455 SM00448 cheY-homologous receiver domain CUJ84_RS17455 SM00911 HWE histidine kinase CUJ84_RS17485 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17515 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS17515 SM00419 helix_turn_helix, cAMP Regulatory protein CUJ84_RS17530 SM00988 UreE urease accessory protein, N-terminal domain CUJ84_RS17535 SM00267 diguanylate cyclase CUJ84_RS17580 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17590 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17610 SM00014 Acid phosphatase homologues CUJ84_RS17615 SM00387 Histidine kinase-like ATPases CUJ84_RS17615 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS17615 SM00448 cheY-homologous receiver domain CUJ84_RS17620 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS17620 SM00448 cheY-homologous receiver domain CUJ84_RS17640 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17645 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17705 SM00448 cheY-homologous receiver domain CUJ84_RS17705 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS17710 SM00448 cheY-homologous receiver domain CUJ84_RS17740 SM00363 S4 RNA-binding domain CUJ84_RS17755 SM00788 Adenylosuccinate synthetase CUJ84_RS17775 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS17775 SM00267 diguanylate cyclase CUJ84_RS17815 SM00822 CUJ84_RS17815 CUJ84_RS17845 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS17900 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS17950 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18045 SM00564 beta-propeller repeat CUJ84_RS18050 SM00028 Tetratricopeptide repeats CUJ84_RS18055 SM00028 Tetratricopeptide repeats CUJ84_RS18065 SM00248 ankyrin repeats CUJ84_RS18070 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS18070 SM00895 CUJ84_RS18070 CUJ84_RS18085 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18140 SM00363 S4 RNA-binding domain CUJ84_RS18180 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS18215 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18215 SM00448 cheY-homologous receiver domain CUJ84_RS18220 SM00387 Histidine kinase-like ATPases CUJ84_RS18220 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS18245 SM00855 Phosphoglycerate mutase family CUJ84_RS18250 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS18250 SM00267 diguanylate cyclase CUJ84_RS18275 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS18305 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18310 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18345 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS18345 SM00091 PAS domain CUJ84_RS18345 SM00267 diguanylate cyclase CUJ84_RS18375 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS18475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS18490 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18530 SM01350 CUJ84_RS18530 CUJ84_RS18540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS18545 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS18575 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS18580 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUJ84_RS18595 SM01091 Transporter associated domain CUJ84_RS18635 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18685 SM00822 CUJ84_RS18685 CUJ84_RS18690 SM00448 cheY-homologous receiver domain CUJ84_RS18695 SM00138 Methyltransferase, chemotaxis proteins CUJ84_RS18700 SM00260 Two component signalling adaptor domain CUJ84_RS18705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS18705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS18710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS18710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS18715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS18715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS18720 SM00260 Two component signalling adaptor domain CUJ84_RS18725 SM00073 Histidine Phosphotransfer domain CUJ84_RS18725 SM00260 Two component signalling adaptor domain CUJ84_RS18725 SM00387 Histidine kinase-like ATPases CUJ84_RS18725 SM01231 CUJ84_RS18725 CUJ84_RS18730 SM00448 cheY-homologous receiver domain CUJ84_RS18745 SM00671 Sel1-like repeats. CUJ84_RS18760 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS18775 SM01001 AIR carboxylase CUJ84_RS18790 SM00028 Tetratricopeptide repeats CUJ84_RS18805 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS18880 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS18880 SM00448 cheY-homologous receiver domain CUJ84_RS18930 SM00257 Lysin motif CUJ84_RS18940 SM00244 prohibitin homologues CUJ84_RS18950 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS19025 SM00448 cheY-homologous receiver domain CUJ84_RS19100 SM00028 Tetratricopeptide repeats CUJ84_RS19105 SM00448 cheY-homologous receiver domain CUJ84_RS19105 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS19110 SM00387 Histidine kinase-like ATPases CUJ84_RS19110 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS19115 SM00460 Transglutaminase/protease-like homologues CUJ84_RS19125 SM00460 Transglutaminase/protease-like homologues CUJ84_RS19140 SM00642 Alpha-amylase domain CUJ84_RS19160 SM00642 Alpha-amylase domain CUJ84_RS19205 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS19205 SM01080 CUJ84_RS19205 CUJ84_RS19210 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS19220 SM00028 Tetratricopeptide repeats CUJ84_RS19225 SM00911 HWE histidine kinase CUJ84_RS19245 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CUJ84_RS19245 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CUJ84_RS19260 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS19260 SM00091 PAS domain CUJ84_RS19260 SM00267 diguanylate cyclase CUJ84_RS19290 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS19295 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS19305 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS19310 SM00320 WD40 repeats CUJ84_RS19320 SM00971 Serine acetyltransferase, N-terminal CUJ84_RS19325 SM00267 diguanylate cyclase CUJ84_RS19385 SM01118 CUJ84_RS19385 CUJ84_RS19390 SM00880 CUJ84_RS19390 CUJ84_RS19400 SM00450 Rhodanese Homology Domain CUJ84_RS19405 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS19405 SM00267 diguanylate cyclase CUJ84_RS19440 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS19445 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS19460 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS19480 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS19480 SM00871 Bacterial transcription activator, effector binding domain CUJ84_RS19505 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS19525 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS19555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS19555 SM00387 Histidine kinase-like ATPases CUJ84_RS19555 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS19560 SM00448 cheY-homologous receiver domain CUJ84_RS19560 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS19595 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS19605 SM00478 endonuclease III CUJ84_RS19605 SM00525 CUJ84_RS19605 CUJ84_RS19645 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS19705 SM00822 CUJ84_RS19705 CUJ84_RS19720 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS19730 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS19730 SM00895 CUJ84_RS19730 CUJ84_RS19735 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS19750 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS19755 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS19765 SM00822 CUJ84_RS19765 CUJ84_RS19780 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS19805 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS19815 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS19835 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS19855 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS19885 SM00422 helix_turn_helix, mercury resistance CUJ84_RS19955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS19955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS20000 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20000 SM01086 C-terminal, D2-small domain, of ClpB protein CUJ84_RS20015 SM00937 CUJ84_RS20015 CUJ84_RS20020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS20095 SM00957 SecA DEAD-like domain CUJ84_RS20095 SM00958 SecA preprotein cross-linking domain CUJ84_RS20155 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS20175 SM00507 HNH nucleases CUJ84_RS20180 SM00478 endonuclease III CUJ84_RS20260 SM00448 cheY-homologous receiver domain CUJ84_RS20275 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20290 SM00563 Phosphate acyltransferases CUJ84_RS20325 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS20370 SM00327 von Willebrand factor (vWF) type A domain CUJ84_RS20380 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS20390 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS20390 SM01091 Transporter associated domain CUJ84_RS20430 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS20490 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20515 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS20540 SM00344 helix_turn_helix ASNC type CUJ84_RS20560 SM00260 Two component signalling adaptor domain CUJ84_RS20585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CUJ84_RS20585 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUJ84_RS20590 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CUJ84_RS20605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS20610 SM00822 CUJ84_RS20610 CUJ84_RS20615 SM00422 helix_turn_helix, mercury resistance CUJ84_RS20635 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20665 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20690 SM00487 DEAD-like helicases superfamily CUJ84_RS20690 SM00490 helicase superfamily c-terminal domain CUJ84_RS20695 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20700 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20725 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS20725 SM00895 CUJ84_RS20725 CUJ84_RS20745 SM01130 CUJ84_RS20745 CUJ84_RS20755 SM00563 Phosphate acyltransferases CUJ84_RS20780 SM00822 CUJ84_RS20780 CUJ84_RS20805 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS20810 SM00881 CoA binding domain CUJ84_RS20885 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS20910 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS20930 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS20930 SM00895 CUJ84_RS20930 CUJ84_RS20935 SM00895 CUJ84_RS20935 CUJ84_RS20940 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS20950 SM01130 CUJ84_RS20950 CUJ84_RS20960 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21050 SM01152 CUJ84_RS21050 CUJ84_RS21125 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21165 SM00226 Low molecular weight phosphatase family CUJ84_RS21180 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21215 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21255 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21255 SM00962 SRP54-type protein, GTPase domain CUJ84_RS21255 SM00963 SRP54-type protein, helical bundle domain CUJ84_RS21260 SM00729 Elongator protein 3, MiaB family, Radical SAM CUJ84_RS21280 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21280 SM00962 SRP54-type protein, GTPase domain CUJ84_RS21280 SM00963 SRP54-type protein, helical bundle domain CUJ84_RS21285 SM00830 Chorismate mutase type II CUJ84_RS21310 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS21310 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CUJ84_RS21350 SM00448 cheY-homologous receiver domain CUJ84_RS21350 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS21355 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS21370 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21370 SM00843 CUJ84_RS21370 CUJ84_RS21380 SM00938 Nitrogen regulatory protein P-II CUJ84_RS21400 SM00464 Found in ATP-dependent protease La (LON) CUJ84_RS21440 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS21470 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS21480 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS21480 SM00895 CUJ84_RS21480 CUJ84_RS21510 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21520 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21545 SM01150 CUJ84_RS21545 CUJ84_RS21610 SM00841 Elongation factor P, C-terminal CUJ84_RS21610 SM01185 CUJ84_RS21610 CUJ84_RS21630 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS21630 SM00866 CUJ84_RS21630 CUJ84_RS21655 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21660 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CUJ84_RS21665 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS21685 SM01058 CarD-like/TRCF domain CUJ84_RS21695 SM00363 S4 RNA-binding domain CUJ84_RS21700 SM00490 helicase superfamily c-terminal domain CUJ84_RS21715 SM00822 CUJ84_RS21715 CUJ84_RS21790 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS21790 SM01134 CUJ84_RS21790 CUJ84_RS21800 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS21810 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21825 SM00878 Biotin carboxylase C-terminal domain CUJ84_RS21830 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS21835 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21865 SM01068 Putative carbohydrate binding domain CUJ84_RS21875 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21880 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS21910 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22005 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CUJ84_RS22030 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22055 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS22055 SM00245 tail specific protease CUJ84_RS22080 SM00481 DNA polymerase alpha chain like domain CUJ84_RS22125 SM01329 CUJ84_RS22125 CUJ84_RS22130 SM00014 Acid phosphatase homologues CUJ84_RS22145 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22155 SM00098 Alkaline phosphatase homologues CUJ84_RS22165 SM00859 Semialdehyde dehydrogenase, NAD binding domain CUJ84_RS22175 SM00267 diguanylate cyclase CUJ84_RS22180 SM00947 Carbonic anhydrase CUJ84_RS22205 SM00798 AICARFT/IMPCHase bienzyme CUJ84_RS22205 SM00851 MGS-like domain CUJ84_RS22270 SM00470 ParB-like nuclease domain CUJ84_RS22285 SM01228 CUJ84_RS22285 CUJ84_RS22290 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22295 SM00357 Cold shock protein domain CUJ84_RS22295 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22295 SM00959 Rho termination factor, N-terminal domain CUJ84_RS22335 SM00479 CUJ84_RS22335 CUJ84_RS22350 SM00978 CUJ84_RS22350 CUJ84_RS22355 SM00925 MltA specific insert domain CUJ84_RS22360 SM00463 Small MutS-related domain CUJ84_RS22365 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS22370 SM00387 Histidine kinase-like ATPases CUJ84_RS22370 SM00433 TopoisomeraseII CUJ84_RS22460 SM00091 PAS domain CUJ84_RS22460 SM00387 Histidine kinase-like ATPases CUJ84_RS22460 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS22465 SM00996 S-adenosyl-L-homocysteine hydrolase CUJ84_RS22465 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CUJ84_RS22485 SM00387 Histidine kinase-like ATPases CUJ84_RS22485 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS22490 SM00448 cheY-homologous receiver domain CUJ84_RS22490 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS22565 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22565 SM01086 C-terminal, D2-small domain, of ClpB protein CUJ84_RS22595 SM00448 cheY-homologous receiver domain CUJ84_RS22600 SM00387 Histidine kinase-like ATPases CUJ84_RS22600 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS22605 SM00487 DEAD-like helicases superfamily CUJ84_RS22605 SM00490 helicase superfamily c-terminal domain CUJ84_RS22605 SM00847 Helicase associated domain (HA2) Add an annotation CUJ84_RS22650 SM00028 Tetratricopeptide repeats CUJ84_RS22665 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22685 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS22725 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS22785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS22825 SM00422 helix_turn_helix, mercury resistance CUJ84_RS22825 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS22830 SM00474 3'-5' exonuclease CUJ84_RS22840 SM00316 Ribosomal protein S1-like RNA-binding domain CUJ84_RS22910 SM00825 Beta-ketoacyl synthase CUJ84_RS22925 SM00316 Ribosomal protein S1-like RNA-binding domain CUJ84_RS22925 SM00322 K homology RNA-binding domain CUJ84_RS22930 SM01387 CUJ84_RS22930 CUJ84_RS22960 SM00316 Ribosomal protein S1-like RNA-binding domain CUJ84_RS22960 SM00322 K homology RNA-binding domain CUJ84_RS22985 SM00493 CUJ84_RS22985 CUJ84_RS23005 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23065 SM00287 Bacterial SH3 domain homologues CUJ84_RS23085 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23090 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS23100 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS23120 SM00287 Bacterial SH3 domain homologues CUJ84_RS23130 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS23130 SM00267 diguanylate cyclase CUJ84_RS23135 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS23145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CUJ84_RS23145 SM00474 3'-5' exonuclease CUJ84_RS23145 SM00475 5'-3' exonuclease CUJ84_RS23145 SM00479 CUJ84_RS23145 CUJ84_RS23145 SM00482 DNA polymerase A domain CUJ84_RS23150 SM00843 CUJ84_RS23150 CUJ84_RS23160 SM00072 Guanylate kinase homologues. CUJ84_RS23190 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23200 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23205 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23230 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS23230 SM00866 CUJ84_RS23230 CUJ84_RS23235 SM00855 Phosphoglycerate mutase family CUJ84_RS23245 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23255 SM00851 MGS-like domain CUJ84_RS23290 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23340 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS23365 SM01133 CUJ84_RS23365 CUJ84_RS23370 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CUJ84_RS23420 SM00858 CUJ84_RS23420 CUJ84_RS23470 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS23650 SM01266 CUJ84_RS23650 CUJ84_RS23680 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS23755 SM00873 B3/4 domain CUJ84_RS23755 SM00874 tRNA synthetase B5 domain CUJ84_RS23755 SM00896 Ferredoxin-fold anticodon binding domain CUJ84_RS23830 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS23905 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS23925 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS23925 SM00871 Bacterial transcription activator, effector binding domain CUJ84_RS23940 SM00822 CUJ84_RS23940 CUJ84_RS24030 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CUJ84_RS24050 SM00480 DNA polymerase III beta subunit CUJ84_RS24070 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS24080 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24095 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24130 SM00344 helix_turn_helix ASNC type CUJ84_RS24165 SM00344 helix_turn_helix ASNC type CUJ84_RS24185 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS24185 SM00895 CUJ84_RS24185 CUJ84_RS24205 SM00822 CUJ84_RS24205 CUJ84_RS24275 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CUJ84_RS24275 SM01232 CUJ84_RS24275 CUJ84_RS24295 SM00470 ParB-like nuclease domain CUJ84_RS24305 SM01130 CUJ84_RS24305 CUJ84_RS24310 SM00895 CUJ84_RS24310 CUJ84_RS24355 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS24375 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS24375 SM01134 CUJ84_RS24375 CUJ84_RS24380 SM01133 CUJ84_RS24380 CUJ84_RS24390 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24425 SM00829 Enoylreductase CUJ84_RS24440 SM00344 helix_turn_helix ASNC type CUJ84_RS24445 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS24450 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24455 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS24495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS24495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS24520 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS24520 SM00091 PAS domain CUJ84_RS24520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS24530 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS24545 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24560 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS24560 SM00895 CUJ84_RS24560 CUJ84_RS24565 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS24580 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24625 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24645 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS24670 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24690 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS24695 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS24720 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS24730 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24765 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS24765 SM01134 CUJ84_RS24765 CUJ84_RS24780 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24815 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS24815 SM01134 CUJ84_RS24815 CUJ84_RS24865 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS24875 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS24875 SM00895 CUJ84_RS24875 CUJ84_RS24925 SM01130 CUJ84_RS24925 CUJ84_RS24940 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS24950 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS24950 SM00895 CUJ84_RS24950 CUJ84_RS24960 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25000 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25035 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS25035 SM01134 CUJ84_RS25035 CUJ84_RS25045 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS25050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CUJ84_RS25055 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS25055 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS25055 SM00267 diguanylate cyclase CUJ84_RS25060 SM00387 Histidine kinase-like ATPases CUJ84_RS25060 SM00911 HWE histidine kinase CUJ84_RS25070 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS25090 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25130 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS25150 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25155 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25160 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CUJ84_RS25160 SM00245 tail specific protease CUJ84_RS25175 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25185 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS25195 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS25200 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS25200 SM00448 cheY-homologous receiver domain CUJ84_RS25205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS25205 SM00387 Histidine kinase-like ATPases CUJ84_RS25215 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25245 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS25310 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS25310 SM00895 CUJ84_RS25310 CUJ84_RS25325 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CUJ84_RS25330 SM01092 CO dehydrogenase flavoprotein C-terminal domain CUJ84_RS25355 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS25385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS25410 SM00923 MbtH-like protein CUJ84_RS25415 SM01006 Siderophore biosynthesis protein domain CUJ84_RS25480 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS25530 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25570 SM00267 diguanylate cyclase CUJ84_RS25575 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS25575 SM00895 CUJ84_RS25575 CUJ84_RS25595 SM01130 CUJ84_RS25595 CUJ84_RS25600 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25605 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25610 SM01130 CUJ84_RS25610 CUJ84_RS25615 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS25645 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25650 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25655 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS25685 SM00758 CUJ84_RS25685 CUJ84_RS25685 SM01217 CUJ84_RS25685 CUJ84_RS25695 SM00872 Alpha mannosidase, middle domain CUJ84_RS25735 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS25740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS25750 SM00945 ProQ/FINO family CUJ84_RS25785 SM00387 Histidine kinase-like ATPases CUJ84_RS25790 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS25790 SM00448 cheY-homologous receiver domain CUJ84_RS25795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS25795 SM00091 PAS domain CUJ84_RS25795 SM00387 Histidine kinase-like ATPases CUJ84_RS25795 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS25800 SM00448 cheY-homologous receiver domain CUJ84_RS25815 SM00829 Enoylreductase CUJ84_RS25880 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25905 SM01120 CUJ84_RS25905 CUJ84_RS25930 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS25960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS25960 SM00895 CUJ84_RS25960 CUJ84_RS25980 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS25980 SM00895 CUJ84_RS25980 CUJ84_RS26000 SM00829 Enoylreductase CUJ84_RS26005 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS26005 SM00895 CUJ84_RS26005 CUJ84_RS26010 SM01130 CUJ84_RS26010 CUJ84_RS26020 SM00344 helix_turn_helix ASNC type CUJ84_RS26025 SM01005 Alanine racemase, C-terminal domain CUJ84_RS26035 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS26055 SM00344 helix_turn_helix ASNC type CUJ84_RS26065 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS26075 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS26075 SM00895 CUJ84_RS26075 CUJ84_RS26080 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS26085 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26100 SM01130 CUJ84_RS26100 CUJ84_RS26125 SM00822 CUJ84_RS26125 CUJ84_RS26150 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS26150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS26180 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26220 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26245 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain CUJ84_RS26260 SM00487 DEAD-like helicases superfamily CUJ84_RS26260 SM00490 helicase superfamily c-terminal domain CUJ84_RS26300 SM00487 DEAD-like helicases superfamily CUJ84_RS26345 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS26370 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26400 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS26425 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS26470 SM00822 CUJ84_RS26470 CUJ84_RS26505 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26515 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS26565 SM00867 YceI-like domain CUJ84_RS26590 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26605 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS26655 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS26685 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS26700 SM00903 Flavin reductase like domain CUJ84_RS26710 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS26715 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS26745 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26750 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS26760 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS26790 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS26795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS26895 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CUJ84_RS26900 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CUJ84_RS26915 SM00091 PAS domain CUJ84_RS26915 SM00911 HWE histidine kinase CUJ84_RS26925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS26925 SM00091 PAS domain CUJ84_RS26925 SM00911 HWE histidine kinase CUJ84_RS26980 SM00822 CUJ84_RS26980 CUJ84_RS26995 SM00947 Carbonic anhydrase CUJ84_RS27015 SM00822 CUJ84_RS27015 CUJ84_RS27055 SM00450 Rhodanese Homology Domain CUJ84_RS27070 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27115 SM00857 Resolvase, N terminal domain CUJ84_RS27120 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS27130 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27175 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27185 SM00829 Enoylreductase CUJ84_RS27225 SM00450 Rhodanese Homology Domain CUJ84_RS27260 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27265 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27335 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS27335 SM00866 CUJ84_RS27335 CUJ84_RS27340 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27365 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS27380 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS27420 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS27440 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27445 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27465 SM01012 CUJ84_RS27465 CUJ84_RS27475 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS27475 SM00866 CUJ84_RS27475 CUJ84_RS27480 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27520 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS27520 SM00866 CUJ84_RS27520 CUJ84_RS27530 SM00838 Elongation factor G C-terminus CUJ84_RS27530 SM00889 Elongation factor G, domain IV CUJ84_RS27540 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS27540 SM00866 CUJ84_RS27540 CUJ84_RS27565 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27580 SM00248 ankyrin repeats CUJ84_RS27615 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CUJ84_RS27640 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27660 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS27720 SM00953 CUJ84_RS27720 CUJ84_RS27730 SM00773 Proposed nucleic acid binding domain CUJ84_RS27795 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS27820 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27825 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS27825 SM00895 CUJ84_RS27825 CUJ84_RS27845 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS27865 SM00331 Sigma factor PP2C-like phosphatases CUJ84_RS27865 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CUJ84_RS27885 SM00240 Forkhead associated domain CUJ84_RS27930 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS27930 SM01086 C-terminal, D2-small domain, of ClpB protein CUJ84_RS28035 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28040 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28055 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS28060 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS28065 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS28080 SM00829 Enoylreductase CUJ84_RS28095 SM00091 PAS domain CUJ84_RS28095 SM00267 diguanylate cyclase CUJ84_RS28110 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS28130 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28165 SM00893 Electron transfer flavoprotein domain CUJ84_RS28170 SM00893 Electron transfer flavoprotein domain CUJ84_RS28200 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS28200 SM00895 CUJ84_RS28200 CUJ84_RS28205 SM01130 CUJ84_RS28205 CUJ84_RS28225 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28245 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS28275 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS28275 SM00267 diguanylate cyclase CUJ84_RS28300 SM00822 CUJ84_RS28300 CUJ84_RS28315 SM00822 CUJ84_RS28315 CUJ84_RS28330 SM00344 helix_turn_helix ASNC type CUJ84_RS28345 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS28350 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS28355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS28360 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS28360 SM00895 CUJ84_RS28360 CUJ84_RS28380 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28385 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS28400 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS28415 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28445 SM00344 helix_turn_helix ASNC type CUJ84_RS28450 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28505 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS28510 SM01007 Class II Aldolase and Adducin N-terminal domain CUJ84_RS28530 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS28545 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28560 SM01329 CUJ84_RS28560 CUJ84_RS28650 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS28650 SM00895 CUJ84_RS28650 CUJ84_RS28660 SM00822 CUJ84_RS28660 CUJ84_RS28680 SM00883 Chaperonin 10 Kd subunit CUJ84_RS28735 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28765 SM00448 cheY-homologous receiver domain CUJ84_RS28765 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS28770 SM00387 Histidine kinase-like ATPases CUJ84_RS28770 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS28780 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28790 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS28800 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS28800 SM00895 CUJ84_RS28800 CUJ84_RS28805 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS28810 SM00812 Alpha-L-fucosidase CUJ84_RS28835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS28835 SM01358 CUJ84_RS28835 CUJ84_RS28860 SM00710 Parallel beta-helix repeats CUJ84_RS28865 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28880 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS28915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS28915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS28930 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS28940 SM00642 Alpha-amylase domain CUJ84_RS28945 SM00642 Alpha-amylase domain CUJ84_RS28950 SM00642 Alpha-amylase domain CUJ84_RS28965 SM00344 helix_turn_helix ASNC type CUJ84_RS28970 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS28985 SM00953 CUJ84_RS28985 CUJ84_RS29005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS29005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS29005 SM00387 Histidine kinase-like ATPases CUJ84_RS29005 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS29005 SM00448 cheY-homologous receiver domain CUJ84_RS29010 SM00387 Histidine kinase-like ATPases CUJ84_RS29010 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS29010 SM00448 cheY-homologous receiver domain CUJ84_RS29025 SM00642 Alpha-amylase domain CUJ84_RS29085 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS29090 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS29095 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS29100 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS29110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS29130 SM00155 Phospholipase D. Active site motifs. CUJ84_RS29150 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS29155 SM00903 Flavin reductase like domain CUJ84_RS29190 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29215 SM01133 CUJ84_RS29215 CUJ84_RS29230 SM00357 Cold shock protein domain CUJ84_RS29250 SM00882 Coenzyme A transferase CUJ84_RS29255 SM00822 CUJ84_RS29255 CUJ84_RS29265 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS29265 SM00866 CUJ84_RS29265 CUJ84_RS29300 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29315 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29355 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29380 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS29390 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29395 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29415 SM01130 CUJ84_RS29415 CUJ84_RS29430 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS29430 SM00895 CUJ84_RS29430 CUJ84_RS29450 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29455 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS29460 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS29480 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS29485 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS29485 SM00448 cheY-homologous receiver domain CUJ84_RS29490 SM00448 cheY-homologous receiver domain CUJ84_RS29495 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS29495 SM00448 cheY-homologous receiver domain CUJ84_RS29500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS29500 SM00091 PAS domain CUJ84_RS29500 SM00387 Histidine kinase-like ATPases CUJ84_RS29500 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS29530 SM00470 ParB-like nuclease domain CUJ84_RS29565 SM00422 helix_turn_helix, mercury resistance CUJ84_RS29570 SM00746 metallochaperone-like domain CUJ84_RS29575 SM00642 Alpha-amylase domain CUJ84_RS29585 SM00223 APPLE domain CUJ84_RS29585 SM01359 CUJ84_RS29585 CUJ84_RS29585 SM01360 CUJ84_RS29585 CUJ84_RS29595 SM00448 cheY-homologous receiver domain CUJ84_RS29615 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS29620 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS29630 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29635 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29645 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CUJ84_RS29645 SM00091 PAS domain CUJ84_RS29645 SM00387 Histidine kinase-like ATPases CUJ84_RS29645 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS29645 SM00448 cheY-homologous receiver domain CUJ84_RS29690 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS29730 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29740 SM00984 UDP binding domain CUJ84_RS29755 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29790 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29820 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS29855 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS29855 SM00895 CUJ84_RS29855 CUJ84_RS29860 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS29860 SM00895 CUJ84_RS29860 CUJ84_RS29870 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS29890 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS29945 SM00953 CUJ84_RS29945 CUJ84_RS29995 SM00448 cheY-homologous receiver domain CUJ84_RS30005 SM00448 cheY-homologous receiver domain CUJ84_RS30010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS30010 SM00267 diguanylate cyclase CUJ84_RS30010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS30045 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS30045 SM00448 cheY-homologous receiver domain CUJ84_RS30075 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CUJ84_RS30115 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS30180 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS30215 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS30215 SM00866 CUJ84_RS30215 CUJ84_RS30220 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS30220 SM00866 CUJ84_RS30220 CUJ84_RS30225 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS30240 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS30270 SM00028 Tetratricopeptide repeats CUJ84_RS30295 SM00387 Histidine kinase-like ATPases CUJ84_RS30295 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS30300 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS30300 SM00448 cheY-homologous receiver domain CUJ84_RS30305 SM00448 cheY-homologous receiver domain CUJ84_RS30310 SM00014 Acid phosphatase homologues CUJ84_RS30325 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS30360 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS30385 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS30410 SM00318 Staphylococcal nuclease homologues CUJ84_RS30440 SM00028 Tetratricopeptide repeats CUJ84_RS30505 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS30505 SM00267 diguanylate cyclase CUJ84_RS30505 SM01079 CUJ84_RS30505 CUJ84_RS30520 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS30525 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS30545 SM00813 Alpha-L-arabinofuranosidase C-terminus CUJ84_RS30550 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CUJ84_RS30565 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS30570 SM00882 Coenzyme A transferase CUJ84_RS30575 SM00882 Coenzyme A transferase CUJ84_RS30595 SM00822 CUJ84_RS30595 CUJ84_RS30600 SM00642 Alpha-amylase domain CUJ84_RS30630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CUJ84_RS30630 SM00387 Histidine kinase-like ATPases CUJ84_RS30630 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS30630 SM00448 cheY-homologous receiver domain CUJ84_RS30645 SM00986 Uracil DNA glycosylase superfamily CUJ84_RS30645 SM00987 UreE urease accessory protein, C-terminal domain CUJ84_RS30650 SM00155 Phospholipase D. Active site motifs. CUJ84_RS30660 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain CUJ84_RS30710 SM00223 APPLE domain CUJ84_RS30720 SM00886 Stress responsive A/B Barrel Domain CUJ84_RS30770 SM00822 CUJ84_RS30770 CUJ84_RS30785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS30800 SM00829 Enoylreductase CUJ84_RS30855 SM00481 DNA polymerase alpha chain like domain CUJ84_RS30880 SM00912 haemagglutination activity domain CUJ84_RS30920 SM00028 Tetratricopeptide repeats CUJ84_RS30940 SM00357 Cold shock protein domain CUJ84_RS31075 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS31075 SM00895 CUJ84_RS31075 CUJ84_RS31100 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31120 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31150 SM00448 cheY-homologous receiver domain CUJ84_RS31150 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS31155 SM00387 Histidine kinase-like ATPases CUJ84_RS31155 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS31185 SM00829 Enoylreductase CUJ84_RS31225 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31230 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31280 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31290 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS31290 SM01134 CUJ84_RS31290 CUJ84_RS31295 SM01007 Class II Aldolase and Adducin N-terminal domain CUJ84_RS31320 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS31385 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31390 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31440 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31465 SM01012 CUJ84_RS31465 CUJ84_RS31505 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31530 SM00287 Bacterial SH3 domain homologues CUJ84_RS31585 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31640 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31650 SM01119 CUJ84_RS31650 CUJ84_RS31695 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS31700 SM00829 Enoylreductase CUJ84_RS31705 SM00822 CUJ84_RS31705 CUJ84_RS31725 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31730 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS31765 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS31765 SM00895 CUJ84_RS31765 CUJ84_RS31785 SM00479 CUJ84_RS31785 CUJ84_RS31790 SM00387 Histidine kinase-like ATPases CUJ84_RS31790 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS31795 SM00448 cheY-homologous receiver domain CUJ84_RS31795 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS31810 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS31835 SM00357 Cold shock protein domain CUJ84_RS31900 SM01230 CUJ84_RS31900 CUJ84_RS31920 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS31925 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS32010 SM00240 Forkhead associated domain CUJ84_RS32040 SM00112 Cadherin repeats. CUJ84_RS32050 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS32055 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS32075 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS32135 SM00220 Serine/Threonine protein kinases, catalytic domain CUJ84_RS32140 SM00093 SERine Proteinase INhibitors CUJ84_RS32145 SM00020 Trypsin-like serine protease CUJ84_RS32185 SM00671 Sel1-like repeats. CUJ84_RS32190 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CUJ84_RS32200 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS32210 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS32230 SM00028 Tetratricopeptide repeats CUJ84_RS32230 SM01043 Bacterial transcriptional activator domain CUJ84_RS32285 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS32340 SM00470 ParB-like nuclease domain CUJ84_RS32355 SM00357 Cold shock protein domain CUJ84_RS32505 SM00357 Cold shock protein domain CUJ84_RS32585 SM00788 Adenylosuccinate synthetase CUJ84_RS32615 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS32645 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS32650 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS32700 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS32725 SM01130 CUJ84_RS32725 CUJ84_RS32730 SM00344 helix_turn_helix ASNC type CUJ84_RS32745 SM01130 CUJ84_RS32745 CUJ84_RS32780 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS32785 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS32790 SM00873 B3/4 domain CUJ84_RS32795 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS32805 SM00091 PAS domain CUJ84_RS32805 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS32820 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS32860 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS32940 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS32940 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS32955 SM00387 Histidine kinase-like ATPases CUJ84_RS32975 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS32975 SM01134 CUJ84_RS32975 CUJ84_RS33040 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS33040 SM00267 diguanylate cyclase CUJ84_RS33075 SM00387 Histidine kinase-like ATPases CUJ84_RS33075 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS33105 SM00966 SpoVT / AbrB like domain CUJ84_RS33305 SM00357 Cold shock protein domain CUJ84_RS33535 SM00859 Semialdehyde dehydrogenase, NAD binding domain CUJ84_RS33595 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS33600 SM01209 CUJ84_RS33600 CUJ84_RS33610 SM01230 CUJ84_RS33610 CUJ84_RS33655 SM00344 helix_turn_helix ASNC type CUJ84_RS33675 SM00854 Bacterial capsule synthesis protein PGA_cap CUJ84_RS33740 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS33755 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS33760 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS33820 SM00882 Coenzyme A transferase CUJ84_RS33825 SM00882 Coenzyme A transferase CUJ84_RS33850 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CUJ84_RS33860 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS33940 SM00857 Resolvase, N terminal domain CUJ84_RS33955 SM01209 CUJ84_RS33955 CUJ84_RS33965 SM01209 CUJ84_RS33965 CUJ84_RS34085 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS34095 SM00893 Electron transfer flavoprotein domain CUJ84_RS34100 SM00893 Electron transfer flavoprotein domain CUJ84_RS34115 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS34190 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS34220 SM00825 Beta-ketoacyl synthase CUJ84_RS34225 SM01266 CUJ84_RS34225 CUJ84_RS34405 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS34420 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS34495 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS34640 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS34680 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS34705 SM00100 Cyclic nucleotide-monophosphate binding domain CUJ84_RS34705 SM00419 helix_turn_helix, cAMP Regulatory protein CUJ84_RS34730 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS34730 SM00866 CUJ84_RS34730 CUJ84_RS34755 SM00487 DEAD-like helicases superfamily CUJ84_RS34760 SM00470 ParB-like nuclease domain CUJ84_RS34795 SM00773 Proposed nucleic acid binding domain CUJ84_RS34875 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS34885 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS34925 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS34955 SM00470 ParB-like nuclease domain CUJ84_RS34975 SM00857 Resolvase, N terminal domain CUJ84_RS34985 SM01217 CUJ84_RS34985 CUJ84_RS34990 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS35000 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35035 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CUJ84_RS35075 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS35085 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS35090 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS35160 SM00244 prohibitin homologues CUJ84_RS35185 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS35185 SM01134 CUJ84_RS35185 CUJ84_RS35220 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35270 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS35290 SM00640 Glycosyl hydrolases family 32 CUJ84_RS35295 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35370 SM00710 Parallel beta-helix repeats CUJ84_RS35400 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS35445 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CUJ84_RS35445 SM00736 Dystroglycan-type cadherin-like domains. CUJ84_RS35450 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS35460 SM00833 Cobalamin synthesis protein cobW C-terminal domain CUJ84_RS35470 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35510 SM00860 SMI1 / KNR4 family CUJ84_RS35515 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS35525 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35550 SM00530 Helix-turn-helix XRE-family like proteins CUJ84_RS35570 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35570 SM00930 CUJ84_RS35570 CUJ84_RS35615 SM00796 Allophanate hydrolase subunit 1 CUJ84_RS35615 SM00797 Allophanate hydrolase subunit 2 CUJ84_RS35615 SM00878 Biotin carboxylase C-terminal domain CUJ84_RS35630 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35645 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS35665 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35690 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35695 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35715 SM00978 CUJ84_RS35715 CUJ84_RS35740 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35750 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS35760 SM00267 diguanylate cyclase CUJ84_RS35775 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35780 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35810 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35835 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS35865 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35870 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS35880 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35920 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35975 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS35995 SM00563 Phosphate acyltransferases CUJ84_RS36010 SM00271 DnaJ molecular chaperone homology domain CUJ84_RS36045 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36065 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS36075 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS36095 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36130 SM00028 Tetratricopeptide repeats CUJ84_RS36135 SM00650 Ribosomal RNA adenine dimethylases CUJ84_RS36145 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS36145 SM00895 CUJ84_RS36145 CUJ84_RS36155 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36160 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36180 SM01130 CUJ84_RS36180 CUJ84_RS36200 SM00953 CUJ84_RS36200 CUJ84_RS36220 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36235 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS36245 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36285 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36290 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36300 SM00420 helix_turn_helix, Deoxyribose operon repressor CUJ84_RS36300 SM01134 CUJ84_RS36300 CUJ84_RS36355 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36390 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS36390 SM00895 CUJ84_RS36390 CUJ84_RS36425 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS36445 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36450 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS36460 SM00773 Proposed nucleic acid binding domain CUJ84_RS36475 SM00971 Serine acetyltransferase, N-terminal CUJ84_RS36500 SM00470 ParB-like nuclease domain CUJ84_RS36540 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36545 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS36550 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS36595 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36600 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS36610 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS36610 SM00895 CUJ84_RS36610 CUJ84_RS36650 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS36665 SM00903 Flavin reductase like domain CUJ84_RS36700 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36735 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS36750 SM00773 Proposed nucleic acid binding domain CUJ84_RS36755 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36780 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS36785 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS36810 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36815 SM01130 CUJ84_RS36815 CUJ84_RS36820 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS36820 SM00895 CUJ84_RS36820 CUJ84_RS36840 SM00812 Alpha-L-fucosidase CUJ84_RS36845 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS36865 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36870 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS36915 SM00448 cheY-homologous receiver domain CUJ84_RS36915 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS36920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS36920 SM00387 Histidine kinase-like ATPases CUJ84_RS36920 SM00388 His Kinase A (phosphoacceptor) domain CUJ84_RS36940 SM00878 Biotin carboxylase C-terminal domain CUJ84_RS36955 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS36960 SM00822 CUJ84_RS36960 CUJ84_RS36980 SM00861 Transketolase, pyrimidine binding domain CUJ84_RS37000 SM00869 Autotransporter beta-domain CUJ84_RS37005 SM00849 Metallo-beta-lactamase superfamily CUJ84_RS37055 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37095 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37100 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS37100 SM00895 CUJ84_RS37100 CUJ84_RS37140 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37155 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37170 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS37175 SM00345 helix_turn_helix gluconate operon transcriptional repressor CUJ84_RS37175 SM00866 CUJ84_RS37175 CUJ84_RS37195 SM00903 Flavin reductase like domain CUJ84_RS37215 SM00052 Putative diguanylate phosphodiesterase CUJ84_RS37215 SM00267 diguanylate cyclase CUJ84_RS37220 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS37245 SM00342 helix_turn_helix, arabinose operon control protein CUJ84_RS37265 SM00881 CoA binding domain CUJ84_RS37290 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37295 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CUJ84_RS37310 SM00327 von Willebrand factor (vWF) type A domain CUJ84_RS37320 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS37325 SM00829 Enoylreductase CUJ84_RS37350 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37380 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CUJ84_RS37395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CUJ84_RS37410 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS37410 SM00448 cheY-homologous receiver domain CUJ84_RS37415 SM00387 Histidine kinase-like ATPases CUJ84_RS37415 SM01049 CUJ84_RS37415 CUJ84_RS37420 SM00344 helix_turn_helix ASNC type CUJ84_RS37425 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37430 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS37450 SM00347 helix_turn_helix multiple antibiotic resistance protein CUJ84_RS37460 SM00116 Domain in cystathionine beta-synthase and other proteins. CUJ84_RS37465 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37485 SM00346 helix_turn_helix isocitrate lyase regulation CUJ84_RS37495 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37560 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37575 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS37590 SM00062 Bacterial periplasmic substrate-binding proteins CUJ84_RS37595 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37630 SM00797 Allophanate hydrolase subunit 2 CUJ84_RS37635 SM00796 Allophanate hydrolase subunit 1 CUJ84_RS37645 SM00878 Biotin carboxylase C-terminal domain CUJ84_RS37670 SM00028 Tetratricopeptide repeats CUJ84_RS37670 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CUJ84_RS37675 SM00354 helix_turn _helix lactose operon repressor CUJ84_RS37700 SM00382 ATPases associated with a variety of cellular activities CUJ84_RS37750 SM00421 helix_turn_helix, Lux Regulon CUJ84_RS37765 SM00448 cheY-homologous receiver domain CUJ84_RS37765 SM00862 Transcriptional regulatory protein, C terminal CUJ84_RS37770 SM00387 Histidine kinase-like ATPases CUJ84_RS37770 SM00388 His Kinase A (phosphoacceptor) domain