locus-tag class description RL_RS00005 PF03618 Kinase/pyrophosphorylase RL_RS00010 PF02545 Maf-like protein RL_RS00015 PF01488 Shikimate / quinate 5-dehydrogenase RL_RS00015 PF08501 Shikimate dehydrogenase substrate binding domain RL_RS00015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RL_RS00020 PF01121 Dephospho-CoA kinase RL_RS00025 PF00929 Exonuclease RL_RS00030 PF02556 Preprotein translocase subunit SecB RL_RS00035 PF04186 FxsA cytoplasmic membrane protein RL_RS00045 PF03562 MltA specific insert domain RL_RS00045 PF06725 3D domain RL_RS00060 PF01751 Toprim domain RL_RS00060 PF00986 DNA gyrase B subunit, carboxyl terminus RL_RS00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS00060 PF00204 DNA gyrase B RL_RS00075 PF13409 Glutathione S-transferase, N-terminal domain RL_RS00080 PF01557 Fumarylacetoacetate (FAA) hydrolase family RL_RS00100 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RL_RS00105 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS00110 PF00290 Tryptophan synthase alpha chain RL_RS00115 PF01039 Carboxyl transferase domain RL_RS00120 PF08245 Mur ligase middle domain RL_RS00125 PF00085 Thioredoxin RL_RS00130 PF00580 UvrD/REP helicase N-terminal domain RL_RS00130 PF13361 UvrD-like helicase C-terminal domain RL_RS00135 PF12705 PD-(D/E)XK nuclease superfamily RL_RS00140 PF12804 MobA-like NTP transferase domain RL_RS00145 PF01636 Phosphotransferase enzyme family RL_RS00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS00150 PF00512 His Kinase A (phospho-acceptor) domain RL_RS00155 PF05221 S-adenosyl-L-homocysteine hydrolase RL_RS00155 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RL_RS00160 PF00381 PTS HPr component phosphorylation site RL_RS00165 PF03830 PTS system sorbose subfamily IIB component RL_RS00165 PF03610 PTS system fructose IIA component RL_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS00175 PF13755 Sensor N-terminal transmembrane domain RL_RS00175 PF00672 HAMP domain RL_RS00175 PF00512 His Kinase A (phospho-acceptor) domain RL_RS00175 PF13756 Stimulus-sensing domain RL_RS00180 PF00486 Transcriptional regulatory protein, C terminal RL_RS00180 PF00072 Response regulator receiver domain RL_RS00185 PF01293 Phosphoenolpyruvate carboxykinase RL_RS00190 PF00472 RF-1 domain RL_RS00195 PF13532 2OG-Fe(II) oxygenase superfamily RL_RS00200 PF00485 Phosphoribulokinase / Uridine kinase family RL_RS00205 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RL_RS00210 PF00977 Histidine biosynthesis protein RL_RS00215 PF00977 Histidine biosynthesis protein RL_RS00230 PF00117 Glutamine amidotransferase class-I RL_RS00240 PF00475 Imidazoleglycerol-phosphate dehydratase RL_RS00245 PF00227 Proteasome subunit RL_RS00255 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS00255 PF07724 AAA domain (Cdc48 subfamily) RL_RS00255 PF10431 C-terminal, D2-small domain, of ClpB protein RL_RS00265 PF00067 Cytochrome P450 RL_RS00270 PF01274 Malate synthase RL_RS00285 PF00072 Response regulator receiver domain RL_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS00290 PF00512 His Kinase A (phospho-acceptor) domain RL_RS00295 PF04408 Helicase associated domain (HA2) RL_RS00295 PF00270 DEAD/DEAH box helicase RL_RS00295 PF00271 Helicase conserved C-terminal domain RL_RS00295 PF08482 ATP-dependent helicase C-terminal RL_RS00300 PF02423 Ornithine cyclodeaminase/mu-crystallin family RL_RS00335 PF00128 Alpha amylase, catalytic domain RL_RS00335 PF02903 Alpha amylase, N-terminal ig-like domain RL_RS00350 PF00691 OmpA family RL_RS00360 PF06165 Glycosyltransferase family 36 RL_RS00360 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain RL_RS00360 PF10091 Putative glucoamylase RL_RS00365 PF09364 XFP N-terminal domain RL_RS00365 PF09363 XFP C-terminal domain RL_RS00365 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS00370 PF00571 CBS domain RL_RS00375 PF00005 ABC transporter RL_RS00375 PF06472 ABC transporter transmembrane region 2 RL_RS00390 PF00529 HlyD membrane-fusion protein of T1SS RL_RS00395 PF00005 ABC transporter RL_RS00395 PF00664 ABC transporter transmembrane region RL_RS00410 PF00072 Response regulator receiver domain RL_RS00410 PF00196 Bacterial regulatory proteins, luxR family RL_RS00420 PF01370 NAD dependent epimerase/dehydratase family RL_RS00425 PF16363 GDP-mannose 4,6 dehydratase RL_RS00430 PF03552 Cellulose synthase RL_RS00430 PF00535 Glycosyl transferase family 2 RL_RS00430 PF07238 PilZ domain RL_RS00450 PF00356 Bacterial regulatory proteins, lacI family RL_RS00460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RL_RS00460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RL_RS00465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS00465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS00480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS00480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS00485 PF17938 Tetracyclin repressor-like, C-terminal domain RL_RS00485 PF00440 Bacterial regulatory proteins, tetR family RL_RS00495 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS00500 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS00505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS00505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS00510 PF03459 TOBE domain RL_RS00510 PF17912 MalK OB fold domain RL_RS00510 PF00005 ABC transporter RL_RS00520 PF01266 FAD dependent oxidoreductase RL_RS00520 PF16350 FAD dependent oxidoreductase central domain RL_RS00520 PF01571 Aminomethyltransferase folate-binding domain RL_RS00520 PF08669 Glycine cleavage T-protein C-terminal barrel domain RL_RS00525 PF08125 Mannitol dehydrogenase C-terminal domain RL_RS00525 PF01232 Mannitol dehydrogenase Rossmann domain RL_RS00530 PF02614 Glucuronate isomerase RL_RS00535 PF04102 SlyX RL_RS00540 PF00171 Aldehyde dehydrogenase family RL_RS00545 PF00202 Aminotransferase class-III RL_RS00565 PF00575 S1 RNA binding domain RL_RS00570 PF02224 Cytidylate kinase RL_RS00575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RL_RS00595 PF01541 GIY-YIG catalytic domain RL_RS00600 PF06912 Protein of unknown function (DUF1275) RL_RS00615 PF03458 UPF0126 domain RL_RS00625 PF07977 FabA-like domain RL_RS00630 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS00630 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS00640 PF05175 Methyltransferase small domain RL_RS00640 PF08468 Methyltransferase small domain N-terminal RL_RS00645 PF03725 3' exoribonuclease family, domain 2 RL_RS00645 PF00575 S1 RNA binding domain RL_RS00645 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RL_RS00645 PF00013 KH domain RL_RS00645 PF01138 3' exoribonuclease family, domain 1 RL_RS00650 PF00312 Ribosomal protein S15 RL_RS00655 PF00561 alpha/beta hydrolase fold RL_RS00660 PF01509 TruB family pseudouridylate synthase (N terminal domain) RL_RS00660 PF09157 Pseudouridine synthase II TruB, C-terminal RL_RS00660 PF16198 tRNA pseudouridylate synthase B C-terminal domain RL_RS00665 PF02033 Ribosome-binding factor A RL_RS00670 PF04760 Translation initiation factor IF-2, N-terminal region RL_RS00670 PF08364 Bacterial translation initiation factor IF-2 associated region RL_RS00670 PF11987 Translation-initiation factor 2 RL_RS00670 PF00009 Elongation factor Tu GTP binding domain RL_RS00680 PF00575 S1 RNA binding domain RL_RS00680 PF08529 NusA N-terminal domain RL_RS00680 PF13184 NusA-like KH domain RL_RS00685 PF02576 RimP N-terminal domain RL_RS00685 PF17384 RimP C-terminal SH3 domain RL_RS00690 PF05977 Transmembrane secretion effector RL_RS00700 PF13406 Transglycosylase SLT domain RL_RS00705 PF02132 RecR protein RL_RS00705 PF13662 Toprim domain RL_RS00710 PF03473 MOSC domain RL_RS00715 PF02575 YbaB/EbfC DNA-binding family RL_RS00720 PF12170 DNA polymerase III tau subunit V interacting with alpha RL_RS00720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding RL_RS00720 PF12169 DNA polymerase III subunits gamma and tau domain III RL_RS00725 PF01230 HIT domain RL_RS00730 PF09297 NADH pyrophosphatase zinc ribbon domain RL_RS00730 PF00293 NUDIX domain RL_RS00735 PF08279 HTH domain RL_RS00735 PF13280 WYL domain RL_RS00750 PF01817 Chorismate mutase type II RL_RS00750 PF00800 Prephenate dehydratase RL_RS00755 PF02348 Cytidylyltransferase RL_RS00760 PF00034 Cytochrome c RL_RS00770 PF00294 pfkB family carbohydrate kinase RL_RS00780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RL_RS00780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RL_RS00790 PF00899 ThiF family RL_RS00790 PF00581 Rhodanese-like domain RL_RS00795 PF02463 RecF/RecN/SMC N terminal domain RL_RS00800 PF01381 Helix-turn-helix RL_RS00810 PF01556 DnaJ C terminal domain RL_RS00810 PF00684 DnaJ central domain RL_RS00810 PF00226 DnaJ domain RL_RS00815 PF00012 Hsp70 protein RL_RS00820 PF00905 Penicillin binding protein transpeptidase domain RL_RS00820 PF00912 Transglycosylase RL_RS00835 PF01546 Peptidase family M20/M25/M40 RL_RS00835 PF07687 Peptidase dimerisation domain RL_RS00840 PF00563 EAL domain RL_RS00840 PF03707 Bacterial signalling protein N terminal repeat RL_RS00840 PF13188 PAS domain RL_RS00840 PF00990 Diguanylate cyclase, GGDEF domain RL_RS00850 PF01367 5'-3' exonuclease, C-terminal SAM fold RL_RS00850 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RL_RS00850 PF01612 3'-5' exonuclease RL_RS00850 PF00476 DNA polymerase family A RL_RS00855 PF09397 Ftsk gamma domain RL_RS00855 PF01580 FtsK/SpoIIIE family RL_RS00855 PF17854 FtsK alpha domain RL_RS00855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RL_RS00860 PF04229 GrpB protein RL_RS00860 PF13673 Acetyltransferase (GNAT) domain RL_RS00865 PF00625 Guanylate kinase RL_RS00870 PF07969 Amidohydrolase family RL_RS00875 PF06299 Protein of unknown function (DUF1045) RL_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS00885 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS00895 PF02371 Transposase IS116/IS110/IS902 family RL_RS00895 PF01548 Transposase RL_RS00900 PF00005 ABC transporter RL_RS00905 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS00910 PF00005 ABC transporter RL_RS00915 PF00005 ABC transporter RL_RS00920 PF06007 Phosphonate metabolism protein PhnJ RL_RS00925 PF05861 Bacterial phosphonate metabolism protein (PhnI) RL_RS00930 PF05845 Bacterial phosphonate metabolism protein (PhnH) RL_RS00935 PF06754 Phosphonate metabolism protein PhnG RL_RS00940 PF07702 UTRA domain RL_RS00940 PF00392 Bacterial regulatory proteins, gntR family RL_RS00945 PF00300 Histidine phosphatase superfamily (branch 1) RL_RS00950 PF05173 Dihydrodipicolinate reductase, C-terminus RL_RS00950 PF01113 Dihydrodipicolinate reductase, N-terminus RL_RS00955 PF00664 ABC transporter transmembrane region RL_RS00955 PF00005 ABC transporter RL_RS00960 PF02685 Glucokinase RL_RS00965 PF02142 MGS-like domain RL_RS00970 PF03411 Penicillin-insensitive murein endopeptidase RL_RS00975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS00980 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS00985 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS00985 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS00990 PF00005 ABC transporter RL_RS00990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS00995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RL_RS01005 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RL_RS01005 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RL_RS01025 PF01037 Lrp/AsnC ligand binding domain RL_RS01040 PF02608 ABC transporter substrate-binding protein PnrA-like RL_RS01045 PF00005 ABC transporter RL_RS01050 PF02653 Branched-chain amino acid transport system / permease component RL_RS01055 PF02653 Branched-chain amino acid transport system / permease component RL_RS01060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RL_RS01065 PF01048 Phosphorylase superfamily RL_RS01070 PF01791 DeoC/LacD family aldolase RL_RS01075 PF02885 Glycosyl transferase family, helical bundle domain RL_RS01075 PF00591 Glycosyl transferase family, a/b domain RL_RS01075 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RL_RS01090 PF00962 Adenosine/AMP deaminase RL_RS01095 PF01676 Metalloenzyme superfamily RL_RS01130 PF04972 BON domain RL_RS01130 PF13629 Pilus formation protein N terminal region RL_RS01130 PF00263 Bacterial type II and III secretion system protein RL_RS01145 PF00437 Type II/IV secretion system protein RL_RS01160 PF01810 LysE type translocator RL_RS01170 PF02789 Cytosol aminopeptidase family, N-terminal domain RL_RS01170 PF00883 Cytosol aminopeptidase family, catalytic domain RL_RS01180 PF00877 NlpC/P60 family RL_RS01180 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain RL_RS01185 PF01425 Amidase RL_RS01190 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS01190 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS01195 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS01200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS01205 PF03466 LysR substrate binding domain RL_RS01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01210 PF03576 Peptidase family S58 RL_RS01220 PF00202 Aminotransferase class-III RL_RS01225 PF00551 Formyl transferase RL_RS01230 PF01757 Acyltransferase family RL_RS01240 PF00150 Cellulase (glycosyl hydrolase family 5) RL_RS01255 PF05711 Macrocin-O-methyltransferase (TylF) RL_RS01260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RL_RS01275 PF00535 Glycosyl transferase family 2 RL_RS01280 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RL_RS01290 PF16363 GDP-mannose 4,6 dehydratase RL_RS01295 PF00483 Nucleotidyl transferase RL_RS01335 PF00009 Elongation factor Tu GTP binding domain RL_RS01335 PF03144 Elongation factor Tu domain 2 RL_RS01335 PF06421 GTP-binding protein LepA C-terminus RL_RS01335 PF00679 Elongation factor G C-terminus RL_RS01360 PF00850 Histone deacetylase domain RL_RS01365 PF02631 RecX family RL_RS01370 PF00892 EamA-like transporter family RL_RS01390 PF12697 Alpha/beta hydrolase family RL_RS01395 PF05198 Translation initiation factor IF-3, N-terminal domain RL_RS01395 PF00707 Translation initiation factor IF-3, C-terminal domain RL_RS01400 PF01632 Ribosomal protein L35 RL_RS01405 PF00453 Ribosomal protein L20 RL_RS01410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RL_RS01410 PF01409 tRNA synthetases class II core domain (F) RL_RS01415 PF03484 tRNA synthetase B5 domain RL_RS01415 PF03483 B3/4 domain RL_RS01415 PF01588 Putative tRNA binding domain RL_RS01415 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RL_RS01415 PF03147 Ferredoxin-fold anticodon binding domain RL_RS01425 PF00248 Aldo/keto reductase family RL_RS01430 PF03466 LysR substrate binding domain RL_RS01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01435 PF05974 Domain of unknown function (DUF892) RL_RS01450 PF00248 Aldo/keto reductase family RL_RS01455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS01455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS01480 PF02601 Exonuclease VII, large subunit RL_RS01480 PF13742 OB-fold nucleic acid binding domain RL_RS01485 PF02525 Flavodoxin-like fold RL_RS01490 PF01047 MarR family RL_RS01495 PF00892 EamA-like transporter family RL_RS01500 PF02073 Thermophilic metalloprotease (M29) RL_RS01505 PF14497 Glutathione S-transferase, C-terminal domain RL_RS01505 PF13417 Glutathione S-transferase, N-terminal domain RL_RS01515 PF04073 Aminoacyl-tRNA editing domain RL_RS01520 PF03960 ArsC family RL_RS01535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RL_RS01535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RL_RS01540 PF00106 short chain dehydrogenase RL_RS01550 PF03466 LysR substrate binding domain RL_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01565 PF03466 LysR substrate binding domain RL_RS01580 PF12833 Helix-turn-helix domain RL_RS01580 PF12852 Cupin RL_RS01585 PF00248 Aldo/keto reductase family RL_RS01590 PF16363 GDP-mannose 4,6 dehydratase RL_RS01595 PF01872 RibD C-terminal domain RL_RS01600 PF00857 Isochorismatase family RL_RS01605 PF03466 LysR substrate binding domain RL_RS01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01615 PF03928 Haem-degrading RL_RS01620 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS01620 PF00107 Zinc-binding dehydrogenase RL_RS01625 PF01965 DJ-1/PfpI family RL_RS01635 PF00171 Aldehyde dehydrogenase family RL_RS01640 PF07690 Major Facilitator Superfamily RL_RS01645 PF00958 GMP synthase C terminal domain RL_RS01645 PF00117 Glutamine amidotransferase class-I RL_RS01685 PF01189 16S rRNA methyltransferase RsmB/F RL_RS01685 PF01029 NusB family RL_RS01690 PF03330 Lytic transglycolase RL_RS01700 PF08331 Domain of unknown function (DUF1730) RL_RS01705 PF00043 Glutathione S-transferase, C-terminal domain RL_RS01705 PF13417 Glutathione S-transferase, N-terminal domain RL_RS01710 PF02673 Bacitracin resistance protein BacA RL_RS01730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RL_RS01740 PF13649 Methyltransferase domain RL_RS01745 PF00712 DNA polymerase III beta subunit, N-terminal domain RL_RS01745 PF02767 DNA polymerase III beta subunit, central domain RL_RS01745 PF02768 DNA polymerase III beta subunit, C-terminal domain RL_RS01750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RL_RS01755 PF02021 Uncharacterised protein family UPF0102 RL_RS01765 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain RL_RS01765 PF02951 Prokaryotic glutathione synthetase, N-terminal domain RL_RS01770 PF01078 Magnesium chelatase, subunit ChlI RL_RS01770 PF13335 Magnesium chelatase, subunit ChlI C-terminal RL_RS01775 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS01780 PF01810 LysE type translocator RL_RS01785 PF00210 Ferritin-like domain RL_RS01790 PF00892 EamA-like transporter family RL_RS01795 PF01037 Lrp/AsnC ligand binding domain RL_RS01805 PF00692 dUTPase RL_RS01810 PF00009 Elongation factor Tu GTP binding domain RL_RS01810 PF03144 Elongation factor Tu domain 2 RL_RS01810 PF16658 Class II release factor RF3, C-terminal domain RL_RS01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01815 PF03466 LysR substrate binding domain RL_RS01845 PF07690 Major Facilitator Superfamily RL_RS01855 PF05726 Pirin C-terminal cupin domain RL_RS01855 PF02678 Pirin RL_RS01865 PF04127 DNA / pantothenate metabolism flavoprotein RL_RS01865 PF02441 Flavoprotein RL_RS01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01880 PF03466 LysR substrate binding domain RL_RS01885 PF03466 LysR substrate binding domain RL_RS01885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS01890 PF07690 Major Facilitator Superfamily RL_RS01895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS01900 PF17391 Urocanase N-terminal domain RL_RS01900 PF17392 Urocanase C-terminal domain RL_RS01900 PF01175 Urocanase Rossmann-like domain RL_RS01915 PF01546 Peptidase family M20/M25/M40 RL_RS01920 PF13382 Adenine deaminase C-terminal domain RL_RS01920 PF01979 Amidohydrolase family RL_RS01925 PF00221 Aromatic amino acid lyase RL_RS01930 PF03109 ABC1 family RL_RS01935 PF01209 ubiE/COQ5 methyltransferase family RL_RS01940 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RL_RS01940 PF06827 Zinc finger found in FPG and IleRS RL_RS01940 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RL_RS01945 PF00378 Enoyl-CoA hydratase/isomerase RL_RS01950 PF01649 Ribosomal protein S20 RL_RS01955 PF00308 Bacterial dnaA protein RL_RS01955 PF08299 Bacterial dnaA protein helix-turn-helix RL_RS01955 PF11638 DnaA N-terminal domain RL_RS01965 PF04055 Radical SAM superfamily RL_RS01965 PF06969 HemN C-terminal domain RL_RS01970 PF01725 Ham1 family RL_RS01980 PF01138 3' exoribonuclease family, domain 1 RL_RS01980 PF03725 3' exoribonuclease family, domain 2 RL_RS01985 PF01628 HrcA protein C terminal domain RL_RS01990 PF01025 GrpE RL_RS01995 PF01156 Inosine-uridine preferring nucleoside hydrolase RL_RS02000 PF00011 Hsp20/alpha crystallin family RL_RS02020 PF02390 Putative methyltransferase RL_RS02025 PF02772 S-adenosylmethionine synthetase, central domain RL_RS02025 PF02773 S-adenosylmethionine synthetase, C-terminal domain RL_RS02025 PF00438 S-adenosylmethionine synthetase, N-terminal domain RL_RS02030 PF01381 Helix-turn-helix RL_RS02035 PF00795 Carbon-nitrogen hydrolase RL_RS02040 PF00571 CBS domain RL_RS02040 PF03471 Transporter associated domain RL_RS02045 PF02130 Uncharacterized protein family UPF0054 RL_RS02050 PF02562 PhoH-like protein RL_RS02055 PF00919 Uncharacterized protein family UPF0004 RL_RS02055 PF01938 TRAM domain RL_RS02055 PF04055 Radical SAM superfamily RL_RS02060 PF01553 Acyltransferase RL_RS02065 PF01475 Ferric uptake regulator family RL_RS02075 PF00814 Glycoprotease family RL_RS02080 PF01106 NifU-like domain RL_RS02090 PF00579 tRNA synthetases class I (W and Y) RL_RS02105 PF03023 Lipid II flippase MurJ RL_RS02110 PF01909 Nucleotidyltransferase domain RL_RS02110 PF08335 GlnD PII-uridylyltransferase RL_RS02110 PF01842 ACT domain RL_RS02110 PF01966 HD domain RL_RS02120 PF00488 MutS domain V RL_RS02120 PF05190 MutS family domain IV RL_RS02120 PF05192 MutS domain III RL_RS02120 PF05188 MutS domain II RL_RS02120 PF01624 MutS domain I RL_RS02125 PF03949 Malic enzyme, NAD binding domain RL_RS02125 PF00390 Malic enzyme, N-terminal domain RL_RS02125 PF01515 Phosphate acetyl/butaryl transferase RL_RS02135 PF00672 HAMP domain RL_RS02135 PF00072 Response regulator receiver domain RL_RS02135 PF01627 Hpt domain RL_RS02135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS02135 PF00512 His Kinase A (phospho-acceptor) domain RL_RS02135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RL_RS02140 PF01252 Signal peptidase (SPase) II RL_RS02145 PF00588 SpoU rRNA Methylase family RL_RS02145 PF08032 RNA 2'-O ribose methyltransferase substrate binding RL_RS02150 PF10672 S-adenosylmethionine-dependent methyltransferase RL_RS02150 PF01170 Putative RNA methylase family UPF0020 RL_RS02150 PF02926 THUMP domain RL_RS02175 PF00216 Bacterial DNA-binding protein RL_RS02180 PF06965 Na+/H+ antiporter 1 RL_RS02180 PF01343 Peptidase family S49 RL_RS02190 PF03968 OstA-like protein RL_RS02195 PF00005 ABC transporter RL_RS02200 PF00309 Sigma-54 factor, Activator interacting domain (AID) RL_RS02200 PF04552 Sigma-54, DNA binding domain RL_RS02200 PF04963 Sigma-54 factor, core binding domain RL_RS02210 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RL_RS02210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RL_RS02215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RL_RS02220 PF00672 HAMP domain RL_RS02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS02225 PF00294 pfkB family carbohydrate kinase RL_RS02235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS02240 PF01327 Polypeptide deformylase RL_RS02250 PF01850 PIN domain RL_RS02255 PF02911 Formyl transferase, C-terminal domain RL_RS02255 PF00551 Formyl transferase RL_RS02260 PF01416 tRNA pseudouridine synthase RL_RS02270 PF01546 Peptidase family M20/M25/M40 RL_RS02270 PF07687 Peptidase dimerisation domain RL_RS02275 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS02275 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal RL_RS02275 PF14602 Hexapeptide repeat of succinyl-transferase RL_RS02295 PF02310 B12 binding domain RL_RS02295 PF04055 Radical SAM superfamily RL_RS02300 PF02805 Metal binding domain of Ada RL_RS02300 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RL_RS02300 PF12833 Helix-turn-helix domain RL_RS02300 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RL_RS02310 PF01070 FMN-dependent dehydrogenase RL_RS02315 PF00696 Amino acid kinase family RL_RS02320 PF10668 Phage terminase small subunit RL_RS02330 PF02469 Fasciclin domain RL_RS02335 PF07568 Histidine kinase RL_RS02335 PF13426 PAS domain RL_RS02335 PF13581 Histidine kinase-like ATPase domain RL_RS02350 PF00313 'Cold-shock' DNA-binding domain RL_RS02355 PF01926 50S ribosome-binding GTPase RL_RS02360 PF02096 60Kd inner membrane protein RL_RS02360 PF14849 YidC periplasmic domain RL_RS02365 PF00825 Ribonuclease P RL_RS02370 PF00468 Ribosomal protein L34 RL_RS02375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS02375 PF00672 HAMP domain RL_RS02375 PF02203 Tar ligand binding domain homologue RL_RS02380 PF00989 PAS fold RL_RS02380 PF00512 His Kinase A (phospho-acceptor) domain RL_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS02395 PF01609 Transposase DDE domain RL_RS02400 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS02470 PF00398 Ribosomal RNA adenine dimethylase RL_RS02475 PF18665 Tetracyclin repressor-like, C-terminal domain RL_RS02475 PF00440 Bacterial regulatory proteins, tetR family RL_RS02485 PF00248 Aldo/keto reductase family RL_RS02500 PF01266 FAD dependent oxidoreductase RL_RS02510 PF05544 Proline racemase RL_RS02515 PF00440 Bacterial regulatory proteins, tetR family RL_RS02535 PF00106 short chain dehydrogenase RL_RS02540 PF00990 Diguanylate cyclase, GGDEF domain RL_RS02540 PF00563 EAL domain RL_RS02540 PF13188 PAS domain RL_RS02540 PF03707 Bacterial signalling protein N terminal repeat RL_RS02555 PF00480 ROK family RL_RS02560 PF13407 Periplasmic binding protein domain RL_RS02565 PF02653 Branched-chain amino acid transport system / permease component RL_RS02570 PF00005 ABC transporter RL_RS02575 PF00485 Phosphoribulokinase / Uridine kinase family RL_RS02580 PF01979 Amidohydrolase family RL_RS02585 PF00990 Diguanylate cyclase, GGDEF domain RL_RS02615 PF08361 MAATS-type transcriptional repressor, C-terminal region RL_RS02615 PF00440 Bacterial regulatory proteins, tetR family RL_RS02620 PF00156 Phosphoribosyl transferase domain RL_RS02625 PF00294 pfkB family carbohydrate kinase RL_RS02630 PF00982 Glycosyltransferase family 20 RL_RS02635 PF00342 Phosphoglucose isomerase RL_RS02640 PF13193 AMP-binding enzyme C-terminal domain RL_RS02640 PF00501 AMP-binding enzyme RL_RS02650 PF00703 Glycosyl hydrolases family 2 RL_RS02650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RL_RS02650 PF02837 Glycosyl hydrolases family 2, sugar binding domain RL_RS02650 PF02929 Beta galactosidase small chain RL_RS02650 PF16353 Domain of unknown function(DUF4981) RL_RS02655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS02665 PF00005 ABC transporter RL_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS02675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RL_RS02680 PF03466 LysR substrate binding domain RL_RS02680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS02685 PF03932 CutC family RL_RS02690 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS02690 PF00107 Zinc-binding dehydrogenase RL_RS02695 PF02653 Branched-chain amino acid transport system / permease component RL_RS02700 PF00005 ABC transporter RL_RS02710 PF05025 RbsD / FucU transport protein family RL_RS02715 PF00248 Aldo/keto reductase family RL_RS02720 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RL_RS02720 PF08666 SAF domain RL_RS02725 PF00392 Bacterial regulatory proteins, gntR family RL_RS02725 PF07729 FCD domain RL_RS02730 PF14437 MafB19-like deaminase RL_RS02735 PF06472 ABC transporter transmembrane region 2 RL_RS02735 PF00005 ABC transporter RL_RS02760 PF07690 Major Facilitator Superfamily RL_RS02775 PF03597 Cytochrome oxidase maturation protein cbb3-type RL_RS02795 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RL_RS02795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RL_RS02810 PF00115 Cytochrome C and Quinol oxidase polypeptide I RL_RS02830 PF03976 Polyphosphate kinase 2 (PPK2) RL_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS02835 PF00512 His Kinase A (phospho-acceptor) domain RL_RS02835 PF00989 PAS fold RL_RS02835 PF16736 Single Cache-like RL_RS02850 PF12849 PBP superfamily domain RL_RS02855 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS02860 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS02865 PF00005 ABC transporter RL_RS02870 PF01895 PhoU domain RL_RS02875 PF00072 Response regulator receiver domain RL_RS02875 PF00486 Transcriptional regulatory protein, C terminal RL_RS02885 PF00202 Aminotransferase class-III RL_RS02890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RL_RS02890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RL_RS02895 PF01430 Hsp33 protein RL_RS02905 PF04379 ApaG domain RL_RS02910 PF01053 Cys/Met metabolism PLP-dependent enzyme RL_RS02915 PF00692 dUTPase RL_RS02930 PF11606 Family 31 carbohydrate binding protein RL_RS02940 PF16363 GDP-mannose 4,6 dehydratase RL_RS02945 PF16363 GDP-mannose 4,6 dehydratase RL_RS02965 PF00672 HAMP domain RL_RS02965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS02970 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS02985 PF00717 Peptidase S24-like RL_RS02985 PF01726 LexA DNA binding domain RL_RS02990 PF00196 Bacterial regulatory proteins, luxR family RL_RS02990 PF00072 Response regulator receiver domain RL_RS03005 PF01180 Dihydroorotate dehydrogenase RL_RS03010 PF01554 MatE RL_RS03040 PF02627 Carboxymuconolactone decarboxylase family RL_RS03045 PF02082 Transcriptional regulator RL_RS03055 PF00270 DEAD/DEAH box helicase RL_RS03055 PF08494 DEAD/H associated RL_RS03055 PF00271 Helicase conserved C-terminal domain RL_RS03080 PF01925 Sulfite exporter TauE/SafE RL_RS03095 PF00106 short chain dehydrogenase RL_RS03100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RL_RS03100 PF02770 Acyl-CoA dehydrogenase, middle domain RL_RS03100 PF12806 Acetyl-CoA dehydrogenase C-terminal like RL_RS03100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RL_RS03105 PF02803 Thiolase, C-terminal domain RL_RS03105 PF00108 Thiolase, N-terminal domain RL_RS03115 PF00378 Enoyl-CoA hydratase/isomerase RL_RS03115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RL_RS03115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RL_RS03120 PF00313 'Cold-shock' DNA-binding domain RL_RS03150 PF00072 Response regulator receiver domain RL_RS03150 PF01627 Hpt domain RL_RS03150 PF00512 His Kinase A (phospho-acceptor) domain RL_RS03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS03150 PF00672 HAMP domain RL_RS03155 PF01741 Large-conductance mechanosensitive channel, MscL RL_RS03160 PF00155 Aminotransferase class I and II RL_RS03165 PF01370 NAD dependent epimerase/dehydratase family RL_RS03170 PF00563 EAL domain RL_RS03170 PF00990 Diguanylate cyclase, GGDEF domain RL_RS03170 PF08447 PAS fold RL_RS03170 PF08448 PAS fold RL_RS03175 PF00378 Enoyl-CoA hydratase/isomerase RL_RS03180 PF00580 UvrD/REP helicase N-terminal domain RL_RS03180 PF13361 UvrD-like helicase C-terminal domain RL_RS03215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RL_RS03225 PF00815 Histidinol dehydrogenase RL_RS03230 PF06793 Uncharacterised protein family (UPF0262) RL_RS03235 PF01451 Low molecular weight phosphotyrosine protein phosphatase RL_RS03240 PF01176 Translation initiation factor 1A / IF-1 RL_RS03245 PF02545 Maf-like protein RL_RS03250 PF03884 DNA gyrase inhibitor YacG RL_RS03265 PF01381 Helix-turn-helix RL_RS03270 PF01527 Transposase RL_RS03275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS03275 PF00529 HlyD membrane-fusion protein of T1SS RL_RS03280 PF00664 ABC transporter transmembrane region RL_RS03280 PF00005 ABC transporter RL_RS03315 PF12833 Helix-turn-helix domain RL_RS03325 PF00005 ABC transporter RL_RS03330 PF02653 Branched-chain amino acid transport system / permease component RL_RS03350 PF00005 ABC transporter RL_RS03350 PF03459 TOBE domain RL_RS03350 PF17912 MalK OB fold domain RL_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS03375 PF01261 Xylose isomerase-like TIM barrel RL_RS03380 PF00480 ROK family RL_RS03380 PF01325 Iron dependent repressor, N-terminal DNA binding domain RL_RS03385 PF00294 pfkB family carbohydrate kinase RL_RS03390 PF08013 Tagatose 6 phosphate kinase RL_RS03395 PF00106 short chain dehydrogenase RL_RS03410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS03410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS03430 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS03430 PF00107 Zinc-binding dehydrogenase RL_RS03435 PF00356 Bacterial regulatory proteins, lacI family RL_RS03455 PF00534 Glycosyl transferases group 1 RL_RS03455 PF13439 Glycosyltransferase Family 4 RL_RS03460 PF02769 AIR synthase related protein, C-terminal domain RL_RS03460 PF00586 AIR synthase related protein, N-terminal domain RL_RS03475 PF00795 Carbon-nitrogen hydrolase RL_RS03540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS03545 PF08446 PAS fold RL_RS03545 PF00360 Phytochrome region RL_RS03545 PF01590 GAF domain RL_RS03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS03545 PF00512 His Kinase A (phospho-acceptor) domain RL_RS03550 PF00072 Response regulator receiver domain RL_RS03555 PF00512 His Kinase A (phospho-acceptor) domain RL_RS03555 PF08446 PAS fold RL_RS03555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS03555 PF01590 GAF domain RL_RS03555 PF00360 Phytochrome region RL_RS03565 PF03472 Autoinducer binding domain RL_RS03565 PF00196 Bacterial regulatory proteins, luxR family RL_RS03580 PF07549 SecD/SecF GG Motif RL_RS03580 PF02355 Protein export membrane protein RL_RS03590 PF00999 Sodium/hydrogen exchanger family RL_RS03590 PF02254 TrkA-N domain RL_RS03600 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RL_RS03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS03615 PF00072 Response regulator receiver domain RL_RS03620 PF01584 CheW-like domain RL_RS03620 PF01627 Hpt domain RL_RS03620 PF02895 Signal transducing histidine kinase, homodimeric domain RL_RS03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS03625 PF01584 CheW-like domain RL_RS03630 PF03705 CheR methyltransferase, all-alpha domain RL_RS03630 PF01739 CheR methyltransferase, SAM binding domain RL_RS03635 PF00072 Response regulator receiver domain RL_RS03635 PF01339 CheB methylesterase RL_RS03640 PF00072 Response regulator receiver domain RL_RS03645 PF03975 CheD chemotactic sensory transduction RL_RS03655 PF08345 Flagellar M-ring protein C-terminal RL_RS03655 PF01514 Secretory protein of YscJ/FliF family RL_RS03660 PF03472 Autoinducer binding domain RL_RS03660 PF00196 Bacterial regulatory proteins, luxR family RL_RS03675 PF01312 FlhB HrpN YscU SpaS Family RL_RS03680 PF14841 FliG middle domain RL_RS03680 PF14842 FliG N-terminal domain RL_RS03680 PF01706 FliG C-terminal domain RL_RS03685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RL_RS03690 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RL_RS03695 PF01618 MotA/TolQ/ExbB proton channel family RL_RS03700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RL_RS03700 PF00460 Flagella basal body rod protein RL_RS03705 PF18269 T3SS EscN ATPase C-terminal domain RL_RS03705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RL_RS03715 PF00460 Flagella basal body rod protein RL_RS03720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RL_RS03725 PF02049 Flagellar hook-basal body complex protein FliE RL_RS03730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RL_RS03730 PF00460 Flagella basal body rod protein RL_RS03735 PF13144 Chaperone for flagella basal body P-ring formation RL_RS03740 PF02119 Flagellar P-ring protein RL_RS03750 PF02107 Flagellar L-ring protein RL_RS03760 PF00813 FliP family RL_RS03770 PF00669 Bacterial flagellin N-terminal helical region RL_RS03770 PF00700 Bacterial flagellin C-terminal helical region RL_RS03775 PF00700 Bacterial flagellin C-terminal helical region RL_RS03775 PF00669 Bacterial flagellin N-terminal helical region RL_RS03780 PF00700 Bacterial flagellin C-terminal helical region RL_RS03780 PF00669 Bacterial flagellin N-terminal helical region RL_RS03785 PF00669 Bacterial flagellin N-terminal helical region RL_RS03785 PF00700 Bacterial flagellin C-terminal helical region RL_RS03795 PF00691 OmpA family RL_RS03795 PF13677 Membrane MotB of proton-channel complex MotA/MotB RL_RS03805 PF02120 Flagellar hook-length control protein FliK RL_RS03815 PF00486 Transcriptional regulatory protein, C terminal RL_RS03820 PF07559 Flagellar basal body protein FlaE RL_RS03820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RL_RS03820 PF00460 Flagella basal body rod protein RL_RS03840 PF07378 Flagellar protein FlbT RL_RS03850 PF01313 Bacterial export proteins, family 3 RL_RS03855 PF00771 FHIPEP family RL_RS03860 PF01311 Bacterial export proteins, family 1 RL_RS03885 PF03808 Glycosyl transferase WecB/TagA/CpsF family RL_RS03895 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RL_RS03895 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RL_RS03900 PF00356 Bacterial regulatory proteins, lacI family RL_RS03905 PF01547 Bacterial extracellular solute-binding protein RL_RS03910 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS03915 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS03920 PF00128 Alpha amylase, catalytic domain RL_RS03925 PF03459 TOBE domain RL_RS03925 PF17912 MalK OB fold domain RL_RS03925 PF00005 ABC transporter RL_RS03935 PF00920 Dehydratase family RL_RS03940 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RL_RS03945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RL_RS03945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RL_RS03950 PF01266 FAD dependent oxidoreductase RL_RS03955 PF00120 Glutamine synthetase, catalytic domain RL_RS03955 PF03951 Glutamine synthetase, beta-Grasp domain RL_RS03965 PF00672 HAMP domain RL_RS03965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS03970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS03980 PF03466 LysR substrate binding domain RL_RS03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS03990 PF00463 Isocitrate lyase family RL_RS03995 PF01381 Helix-turn-helix RL_RS03995 PF06114 IrrE N-terminal-like domain RL_RS03995 PF09856 Predicted transcriptional regulator (DUF2083) RL_RS04000 PF13416 Bacterial extracellular solute-binding protein RL_RS04005 PF08402 TOBE domain RL_RS04005 PF00005 ABC transporter RL_RS04010 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS04015 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS04025 PF00501 AMP-binding enzyme RL_RS04025 PF13193 AMP-binding enzyme C-terminal domain RL_RS04030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS04030 PF13188 PAS domain RL_RS04030 PF13426 PAS domain RL_RS04030 PF00512 His Kinase A (phospho-acceptor) domain RL_RS04030 PF00989 PAS fold RL_RS04050 PF17841 BID domain of Bartonella effector protein (Bep) RL_RS04050 PF03389 MobA/MobL family RL_RS04050 PF01443 Viral (Superfamily 1) RNA helicase RL_RS04070 PF00171 Aldehyde dehydrogenase family RL_RS04075 PF02082 Transcriptional regulator RL_RS04080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS04085 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS04090 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS04090 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS04095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS04095 PF00005 ABC transporter RL_RS04100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS04100 PF00005 ABC transporter RL_RS04105 PF01202 Shikimate kinase RL_RS04110 PF01266 FAD dependent oxidoreductase RL_RS04115 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RL_RS04120 PF00195 Chalcone and stilbene synthases, N-terminal domain RL_RS04120 PF02797 Chalcone and stilbene synthases, C-terminal domain RL_RS04130 PF04542 Sigma-70 region 2 RL_RS04130 PF08281 Sigma-70, region 4 RL_RS04140 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) RL_RS04140 PF08548 Peptidase M10 serralysin C terminal RL_RS04150 PF13276 HTH-like domain RL_RS04150 PF13683 Integrase core domain RL_RS04155 PF01527 Transposase RL_RS04160 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RL_RS04165 PF00483 Nucleotidyl transferase RL_RS04190 PF13649 Methyltransferase domain RL_RS04195 PF00535 Glycosyl transferase family 2 RL_RS04210 PF08889 WbqC-like protein family RL_RS04235 PF02719 Polysaccharide biosynthesis protein RL_RS04245 PF00535 Glycosyl transferase family 2 RL_RS04265 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS04285 PF00977 Histidine biosynthesis protein RL_RS04290 PF00117 Glutamine amidotransferase class-I RL_RS04300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RL_RS04305 PF14602 Hexapeptide repeat of succinyl-transferase RL_RS04305 PF12804 MobA-like NTP transferase domain RL_RS04310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS04310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS04315 PF16363 GDP-mannose 4,6 dehydratase RL_RS04320 PF01370 NAD dependent epimerase/dehydratase family RL_RS04325 PF01527 Transposase RL_RS04370 PF00239 Resolvase, N terminal domain RL_RS04370 PF13408 Recombinase zinc beta ribbon domain RL_RS04370 PF07508 Recombinase RL_RS04405 PF02541 Ppx/GppA phosphatase family RL_RS04410 PF01728 FtsJ-like methyltransferase RL_RS04420 PF07690 Major Facilitator Superfamily RL_RS04425 PF12706 Beta-lactamase superfamily domain RL_RS04430 PF00478 IMP dehydrogenase / GMP reductase domain RL_RS04430 PF00571 CBS domain RL_RS04450 PF03466 LysR substrate binding domain RL_RS04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS04470 PF04107 Glutamate-cysteine ligase family 2(GCS2) RL_RS04475 PF04452 RNA methyltransferase RL_RS04480 PF01384 Phosphate transporter family RL_RS04490 PF03466 LysR substrate binding domain RL_RS04490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS04495 PF05221 S-adenosyl-L-homocysteine hydrolase RL_RS04495 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RL_RS04500 PF14765 Polyketide synthase dehydratase RL_RS04500 PF08659 KR domain RL_RS04500 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS04500 PF00698 Acyl transferase domain RL_RS04500 PF00550 Phosphopantetheine attachment site RL_RS04505 PF03466 LysR substrate binding domain RL_RS04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS04510 PF03466 LysR substrate binding domain RL_RS04515 PF02913 FAD linked oxidases, C-terminal domain RL_RS04515 PF01565 FAD binding domain RL_RS04520 PF01565 FAD binding domain RL_RS04525 PF13183 4Fe-4S dicluster domain RL_RS04525 PF02754 Cysteine-rich domain RL_RS04540 PF17969 L,D-transpeptidase C-terminal domain RL_RS04540 PF01476 LysM domain RL_RS04540 PF03734 L,D-transpeptidase catalytic domain RL_RS04545 PF03734 L,D-transpeptidase catalytic domain RL_RS04545 PF17969 L,D-transpeptidase C-terminal domain RL_RS04550 PF03352 Methyladenine glycosylase RL_RS04570 PF00248 Aldo/keto reductase family RL_RS04590 PF03129 Anticodon binding domain RL_RS04590 PF13393 Histidyl-tRNA synthetase RL_RS04595 PF13393 Histidyl-tRNA synthetase RL_RS04600 PF01634 ATP phosphoribosyltransferase RL_RS04605 PF07681 DoxX RL_RS04610 PF02798 Glutathione S-transferase, N-terminal domain RL_RS04610 PF00043 Glutathione S-transferase, C-terminal domain RL_RS04620 PF00118 TCP-1/cpn60 chaperonin family RL_RS04625 PF00166 Chaperonin 10 Kd subunit RL_RS04635 PF01687 Riboflavin kinase RL_RS04635 PF06574 FAD synthetase RL_RS04650 PF00133 tRNA synthetases class I (I, L, M and V) RL_RS04650 PF08264 Anticodon-binding domain of tRNA RL_RS04660 PF14437 MafB19-like deaminase RL_RS04665 PF01479 S4 domain RL_RS04665 PF00849 RNA pseudouridylate synthase RL_RS04675 PF01734 Patatin-like phospholipase RL_RS04695 PF02254 TrkA-N domain RL_RS04695 PF00999 Sodium/hydrogen exchanger family RL_RS04700 PF01523 Putative modulator of DNA gyrase RL_RS04705 PF00459 Inositol monophosphatase family RL_RS04715 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RL_RS04725 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RL_RS04730 PF07729 FCD domain RL_RS04730 PF00392 Bacterial regulatory proteins, gntR family RL_RS04735 PF02653 Branched-chain amino acid transport system / permease component RL_RS04740 PF00005 ABC transporter RL_RS04755 PF01119 DNA mismatch repair protein, C-terminal domain RL_RS04755 PF08676 MutL C terminal dimerisation domain RL_RS04760 PF00072 Response regulator receiver domain RL_RS04765 PF00563 EAL domain RL_RS04765 PF00990 Diguanylate cyclase, GGDEF domain RL_RS04765 PF03707 Bacterial signalling protein N terminal repeat RL_RS04765 PF13188 PAS domain RL_RS04775 PF08450 SMP-30/Gluconolactonase/LRE-like region RL_RS04780 PF01081 KDPG and KHG aldolase RL_RS04785 PF05035 2-keto-3-deoxy-galactonokinase RL_RS04795 PF01614 Bacterial transcriptional regulator RL_RS04795 PF09339 IclR helix-turn-helix domain RL_RS04800 PF00196 Bacterial regulatory proteins, luxR family RL_RS04800 PF03472 Autoinducer binding domain RL_RS04805 PF01883 Iron-sulfur cluster assembly protein RL_RS04805 PF10609 NUBPL iron-transfer P-loop NTPase RL_RS04810 PF01544 CorA-like Mg2+ transporter protein RL_RS04815 PF02705 K+ potassium transporter RL_RS04825 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter RL_RS04830 PF00119 ATP synthase A chain RL_RS04835 PF00137 ATP synthase subunit C RL_RS04840 PF00430 ATP synthase B/B' CF(0) RL_RS04845 PF00430 ATP synthase B/B' CF(0) RL_RS04850 PF01351 Ribonuclease HII RL_RS04870 PF00994 Probable molybdopterin binding domain RL_RS04875 PF08544 GHMP kinases C terminal RL_RS04875 PF00288 GHMP kinases N terminal domain RL_RS04885 PF00348 Polyprenyl synthetase RL_RS04900 PF01566 Natural resistance-associated macrophage protein RL_RS04905 PF01343 Peptidase family S49 RL_RS04905 PF06965 Na+/H+ antiporter 1 RL_RS04915 PF02091 Glycyl-tRNA synthetase alpha subunit RL_RS04920 PF04011 LemA family RL_RS04925 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RL_RS04935 PF02844 Phosphoribosylglycinamide synthetase, N domain RL_RS04935 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RL_RS04935 PF02843 Phosphoribosylglycinamide synthetase, C domain RL_RS04945 PF02203 Tar ligand binding domain homologue RL_RS04945 PF00672 HAMP domain RL_RS04945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS04950 PF04463 Protein of unknown function (DUF523) RL_RS04955 PF05746 DALR anticodon binding domain RL_RS04955 PF02092 Glycyl-tRNA synthetase beta subunit RL_RS04960 PF17674 HHH domain RL_RS04960 PF00575 S1 RNA binding domain RL_RS04960 PF09371 Tex-like protein N-terminal domain RL_RS04960 PF16921 Tex protein YqgF-like domain RL_RS04970 PF00300 Histidine phosphatase superfamily (branch 1) RL_RS04980 PF01040 UbiA prenyltransferase family RL_RS04995 PF02913 FAD linked oxidases, C-terminal domain RL_RS04995 PF01565 FAD binding domain RL_RS05000 PF03481 Putative GTP-binding controlling metal-binding RL_RS05000 PF01300 Telomere recombination RL_RS05010 PF00355 Rieske [2Fe-2S] domain RL_RS05010 PF00848 Ring hydroxylating alpha subunit (catalytic domain) RL_RS05015 PF07886 BA14K-like protein RL_RS05025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RL_RS05025 PF12806 Acetyl-CoA dehydrogenase C-terminal like RL_RS05025 PF02770 Acyl-CoA dehydrogenase, middle domain RL_RS05025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RL_RS05030 PF00378 Enoyl-CoA hydratase/isomerase RL_RS05035 PF12706 Beta-lactamase superfamily domain RL_RS05045 PF05958 tRNA (Uracil-5-)-methyltransferase RL_RS05050 PF01728 FtsJ-like methyltransferase RL_RS05050 PF01479 S4 domain RL_RS05060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS05060 PF00672 HAMP domain RL_RS05065 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RL_RS05065 PF02779 Transketolase, pyrimidine binding domain RL_RS05065 PF02780 Transketolase, C-terminal domain RL_RS05070 PF02678 Pirin RL_RS05070 PF05726 Pirin C-terminal cupin domain RL_RS05080 PF02609 Exonuclease VII small subunit RL_RS05085 PF00850 Histone deacetylase domain RL_RS05095 PF01613 Flavin reductase like domain RL_RS05105 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS05110 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS05120 PF00005 ABC transporter RL_RS05120 PF08402 TOBE domain RL_RS05130 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS05140 PF07729 FCD domain RL_RS05140 PF00392 Bacterial regulatory proteins, gntR family RL_RS05145 PF00392 Bacterial regulatory proteins, gntR family RL_RS05145 PF07729 FCD domain RL_RS05155 PF00501 AMP-binding enzyme RL_RS05155 PF13193 AMP-binding enzyme C-terminal domain RL_RS05165 PF00224 Pyruvate kinase, barrel domain RL_RS05165 PF02887 Pyruvate kinase, alpha/beta domain RL_RS05170 PF05161 MOFRL family RL_RS05170 PF13660 Domain of unknown function (DUF4147) RL_RS05175 PF00180 Isocitrate/isopropylmalate dehydrogenase RL_RS05180 PF07690 Major Facilitator Superfamily RL_RS05185 PF03466 LysR substrate binding domain RL_RS05185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS05190 PF09334 tRNA synthetases class I (M) RL_RS05190 PF08264 Anticodon-binding domain of tRNA RL_RS05195 PF00360 Phytochrome region RL_RS05195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS05195 PF01590 GAF domain RL_RS05195 PF00512 His Kinase A (phospho-acceptor) domain RL_RS05195 PF08446 PAS fold RL_RS05200 PF12697 Alpha/beta hydrolase family RL_RS05210 PF02632 BioY family RL_RS05215 PF02361 Cobalt transport protein RL_RS05220 PF00005 ABC transporter RL_RS05225 PF06224 Winged helix DNA-binding domain RL_RS05230 PF00925 GTP cyclohydrolase II RL_RS05230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RL_RS05235 PF01264 Chorismate synthase RL_RS05240 PF00563 EAL domain RL_RS05240 PF00990 Diguanylate cyclase, GGDEF domain RL_RS05240 PF03707 Bacterial signalling protein N terminal repeat RL_RS05250 PF00300 Histidine phosphatase superfamily (branch 1) RL_RS05260 PF00226 DnaJ domain RL_RS05260 PF01556 DnaJ C terminal domain RL_RS05260 PF00684 DnaJ central domain RL_RS05270 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RL_RS05270 PF01243 Pyridoxamine 5'-phosphate oxidase RL_RS05280 PF00768 D-alanyl-D-alanine carboxypeptidase RL_RS05280 PF07943 Penicillin-binding protein 5, C-terminal domain RL_RS05295 PF01523 Putative modulator of DNA gyrase RL_RS05305 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RL_RS05305 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RL_RS05310 PF00115 Cytochrome C and Quinol oxidase polypeptide I RL_RS05315 PF01040 UbiA prenyltransferase family RL_RS05325 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 RL_RS05330 PF00510 Cytochrome c oxidase subunit III RL_RS05345 PF02104 SURF1 family RL_RS05350 PF02401 LytB protein RL_RS05355 PF01636 Phosphotransferase enzyme family RL_RS05360 PF00075 RNase H RL_RS05365 PF10005 zinc-ribbon domain RL_RS05365 PF15887 Putative zinc-binding metallo-peptidase RL_RS05375 PF02622 Uncharacterized ACR, COG1678 RL_RS05385 PF00462 Glutaredoxin RL_RS05385 PF08534 Redoxin RL_RS05405 PF03466 LysR substrate binding domain RL_RS05405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS05410 PF13454 FAD-NAD(P)-binding RL_RS05415 PF00005 ABC transporter RL_RS05420 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS05435 PF00005 ABC transporter RL_RS05440 PF00950 ABC 3 transport family RL_RS05445 PF01297 Zinc-uptake complex component A periplasmic RL_RS05490 PF05746 DALR anticodon binding domain RL_RS05490 PF00750 tRNA synthetases class I (R) RL_RS05490 PF03485 Arginyl tRNA synthetase N terminal domain RL_RS05495 PF00563 EAL domain RL_RS05495 PF00990 Diguanylate cyclase, GGDEF domain RL_RS05495 PF03707 Bacterial signalling protein N terminal repeat RL_RS05505 PF00675 Insulinase (Peptidase family M16) RL_RS05505 PF05193 Peptidase M16 inactive domain RL_RS05510 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS05510 PF14821 Threonine synthase N terminus RL_RS05520 PF13419 Haloacid dehalogenase-like hydrolase RL_RS05525 PF00672 HAMP domain RL_RS05525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS05580 PF18755 Restriction Enzyme Adenine Methylase Associated RL_RS05580 PF01555 DNA methylase RL_RS05595 PF10576 Iron-sulfur binding domain of endonuclease III RL_RS05595 PF00633 Helix-hairpin-helix motif RL_RS05595 PF00730 HhH-GPD superfamily base excision DNA repair protein RL_RS05595 PF14815 NUDIX domain RL_RS05610 PF02661 Fic/DOC family RL_RS05630 PF02463 RecF/RecN/SMC N terminal domain RL_RS05635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RL_RS05635 PF00391 PEP-utilising enzyme, mobile domain RL_RS05635 PF02896 PEP-utilising enzyme, TIM barrel domain RL_RS05700 PF01420 Type I restriction modification DNA specificity domain RL_RS05705 PF02384 N-6 DNA Methylase RL_RS05710 PF02384 N-6 DNA Methylase RL_RS05715 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RL_RS05715 PF00271 Helicase conserved C-terminal domain RL_RS05715 PF08463 EcoEI R protein C-terminal RL_RS05715 PF04851 Type III restriction enzyme, res subunit RL_RS05735 PF00106 short chain dehydrogenase RL_RS05755 PF00501 AMP-binding enzyme RL_RS05755 PF01553 Acyltransferase RL_RS05865 PF00135 Carboxylesterase family RL_RS05880 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS05900 PF01925 Sulfite exporter TauE/SafE RL_RS05910 PF04143 Sulphur transport RL_RS05920 PF00753 Metallo-beta-lactamase superfamily RL_RS05920 PF04273 Putative phosphatase (DUF442) RL_RS05945 PF04542 Sigma-70 region 2 RL_RS05945 PF08281 Sigma-70, region 4 RL_RS05960 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS05980 PF08241 Methyltransferase domain RL_RS05995 PF00884 Sulfatase RL_RS06025 PF00512 His Kinase A (phospho-acceptor) domain RL_RS06025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS06025 PF00672 HAMP domain RL_RS06030 PF00486 Transcriptional regulatory protein, C terminal RL_RS06030 PF00072 Response regulator receiver domain RL_RS06045 PF00034 Cytochrome c RL_RS06050 PF00596 Class II Aldolase and Adducin N-terminal domain RL_RS06055 PF00072 Response regulator receiver domain RL_RS06055 PF13426 PAS domain RL_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS06075 PF01042 Endoribonuclease L-PSP RL_RS06080 PF00440 Bacterial regulatory proteins, tetR family RL_RS06085 PF01022 Bacterial regulatory protein, arsR family RL_RS06095 PF00574 Clp protease RL_RS06120 PF01545 Cation efflux family RL_RS06120 PF16916 Dimerisation domain of Zinc Transporter RL_RS06130 PF09335 SNARE associated Golgi protein RL_RS06160 PF02522 Aminoglycoside 3-N-acetyltransferase RL_RS06165 PF01243 Pyridoxamine 5'-phosphate oxidase RL_RS06165 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region RL_RS06175 PF03466 LysR substrate binding domain RL_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06180 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS06195 PF01022 Bacterial regulatory protein, arsR family RL_RS06205 PF01022 Bacterial regulatory protein, arsR family RL_RS06215 PF07886 BA14K-like protein RL_RS06225 PF12951 Passenger-associated-transport-repeat RL_RS06255 PF03466 LysR substrate binding domain RL_RS06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06260 PF00753 Metallo-beta-lactamase superfamily RL_RS06265 PF03466 LysR substrate binding domain RL_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06270 PF13460 NAD(P)H-binding RL_RS06290 PF03466 LysR substrate binding domain RL_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06305 PF13417 Glutathione S-transferase, N-terminal domain RL_RS06305 PF00043 Glutathione S-transferase, C-terminal domain RL_RS06315 PF01022 Bacterial regulatory protein, arsR family RL_RS06350 PF01022 Bacterial regulatory protein, arsR family RL_RS06365 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS06365 PF02743 Cache domain RL_RS06365 PF00672 HAMP domain RL_RS06390 PF02586 SOS response associated peptidase (SRAP) RL_RS06405 PF00106 short chain dehydrogenase RL_RS06415 PF00440 Bacterial regulatory proteins, tetR family RL_RS06415 PF16859 Tetracyclin repressor-like, C-terminal domain RL_RS06430 PF00884 Sulfatase RL_RS06440 PF00884 Sulfatase RL_RS06500 PF12900 Pyridoxamine 5'-phosphate oxidase RL_RS06530 PF13180 PDZ domain RL_RS06535 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RL_RS06535 PF00356 Bacterial regulatory proteins, lacI family RL_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06540 PF03466 LysR substrate binding domain RL_RS06550 PF03466 LysR substrate binding domain RL_RS06550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06560 PF00107 Zinc-binding dehydrogenase RL_RS06560 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS06565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06565 PF03466 LysR substrate binding domain RL_RS06575 PF00009 Elongation factor Tu GTP binding domain RL_RS06580 PF01507 Phosphoadenosine phosphosulfate reductase family RL_RS06585 PF01507 Phosphoadenosine phosphosulfate reductase family RL_RS06590 PF02082 Transcriptional regulator RL_RS06600 PF03466 LysR substrate binding domain RL_RS06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06625 PF05199 GMC oxidoreductase RL_RS06625 PF00732 GMC oxidoreductase RL_RS06630 PF00171 Aldehyde dehydrogenase family RL_RS06635 PF13977 BetI-type transcriptional repressor, C-terminal RL_RS06635 PF00440 Bacterial regulatory proteins, tetR family RL_RS06650 PF12792 CSS motif domain associated with EAL RL_RS06650 PF00563 EAL domain RL_RS06655 PF16197 Ketoacyl-synthetase C-terminal extension RL_RS06655 PF00550 Phosphopantetheine attachment site RL_RS06655 PF00107 Zinc-binding dehydrogenase RL_RS06655 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS06655 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS06655 PF00698 Acyl transferase domain RL_RS06655 PF14765 Polyketide synthase dehydratase RL_RS06655 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS06655 PF08659 KR domain RL_RS06660 PF07690 Major Facilitator Superfamily RL_RS06685 PF00455 DeoR C terminal sensor domain RL_RS06685 PF08220 DeoR-like helix-turn-helix domain RL_RS06695 PF02798 Glutathione S-transferase, N-terminal domain RL_RS06695 PF00043 Glutathione S-transferase, C-terminal domain RL_RS06710 PF03466 LysR substrate binding domain RL_RS06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06715 PF13409 Glutathione S-transferase, N-terminal domain RL_RS06725 PF03707 Bacterial signalling protein N terminal repeat RL_RS06725 PF00563 EAL domain RL_RS06725 PF00990 Diguanylate cyclase, GGDEF domain RL_RS06730 PF03009 Glycerophosphoryl diester phosphodiesterase family RL_RS06735 PF00561 alpha/beta hydrolase fold RL_RS06745 PF01068 ATP dependent DNA ligase domain RL_RS06745 PF04679 ATP dependent DNA ligase C terminal region RL_RS06745 PF04675 DNA ligase N terminus RL_RS06755 PF03734 L,D-transpeptidase catalytic domain RL_RS06755 PF17969 L,D-transpeptidase C-terminal domain RL_RS06760 PF17969 L,D-transpeptidase C-terminal domain RL_RS06760 PF03734 L,D-transpeptidase catalytic domain RL_RS06765 PF00313 'Cold-shock' DNA-binding domain RL_RS06775 PF01165 Ribosomal protein S21 RL_RS06785 PF01047 MarR family RL_RS06790 PF02566 OsmC-like protein RL_RS06810 PF18029 Glyoxalase-like domain RL_RS06810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS06815 PF13505 Outer membrane protein beta-barrel domain RL_RS06820 PF16326 ABC transporter C-terminal domain RL_RS06820 PF00005 ABC transporter RL_RS06820 PF12848 ABC transporter RL_RS06835 PF12848 ABC transporter RL_RS06835 PF00005 ABC transporter RL_RS06835 PF16326 ABC transporter C-terminal domain RL_RS06840 PF05872 Bacterial protein of unknown function (DUF853) RL_RS06860 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RL_RS06860 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RL_RS06865 PF13649 Methyltransferase domain RL_RS06870 PF03471 Transporter associated domain RL_RS06870 PF01595 Cyclin M transmembrane N-terminal domain RL_RS06870 PF00571 CBS domain RL_RS06875 PF00672 HAMP domain RL_RS06875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS06890 PF12002 MgsA AAA+ ATPase C terminal RL_RS06890 PF16193 AAA C-terminal domain RL_RS06890 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS06910 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS06910 PF00107 Zinc-binding dehydrogenase RL_RS06915 PF01063 Amino-transferase class IV RL_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS06925 PF03466 LysR substrate binding domain RL_RS06930 PF13533 Biotin-lipoyl like RL_RS06935 PF07690 Major Facilitator Superfamily RL_RS06945 PF02540 NAD synthase RL_RS06950 PF00043 Glutathione S-transferase, C-terminal domain RL_RS06950 PF02798 Glutathione S-transferase, N-terminal domain RL_RS06960 PF07690 Major Facilitator Superfamily RL_RS06970 PF01925 Sulfite exporter TauE/SafE RL_RS06975 PF08241 Methyltransferase domain RL_RS06985 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RL_RS06985 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RL_RS06995 PF06719 AraC-type transcriptional regulator N-terminus RL_RS06995 PF12833 Helix-turn-helix domain RL_RS07010 PF01810 LysE type translocator RL_RS07015 PF01322 Cytochrome C' RL_RS07020 PF00034 Cytochrome c RL_RS07035 PF02583 Metal-sensitive transcriptional repressor RL_RS07040 PF16916 Dimerisation domain of Zinc Transporter RL_RS07040 PF01545 Cation efflux family RL_RS07055 PF01011 PQQ enzyme repeat RL_RS07060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family RL_RS07065 PF07690 Major Facilitator Superfamily RL_RS07090 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RL_RS07090 PF00326 Prolyl oligopeptidase family RL_RS07115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS07125 PF03006 Haemolysin-III related RL_RS07130 PF00583 Acetyltransferase (GNAT) family RL_RS07140 PF01641 SelR domain RL_RS07150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RL_RS07150 PF13244 Domain of unknown function (DUF4040) RL_RS07150 PF00361 Proton-conducting membrane transporter RL_RS07155 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RL_RS07160 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RL_RS07165 PF00361 Proton-conducting membrane transporter RL_RS07170 PF01899 Na+/H+ ion antiporter subunit RL_RS07175 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RL_RS07180 PF03334 Na+/H+ antiporter subunit RL_RS07185 PF05443 ROS/MUCR transcriptional regulator protein RL_RS07190 PF02657 Fe-S metabolism associated domain RL_RS07195 PF17264 Family of unknown function (DUF5330) RL_RS07200 PF00512 His Kinase A (phospho-acceptor) domain RL_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS07210 PF12833 Helix-turn-helix domain RL_RS07210 PF12852 Cupin RL_RS07215 PF00106 short chain dehydrogenase RL_RS07220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS07220 PF00672 HAMP domain RL_RS07220 PF17200 Single Cache domain 2 RL_RS07250 PF00912 Transglycosylase RL_RS07250 PF00905 Penicillin binding protein transpeptidase domain RL_RS07255 PF03692 Putative zinc- or iron-chelating domain RL_RS07260 PF03741 Integral membrane protein TerC family RL_RS07280 PF00106 short chain dehydrogenase RL_RS07285 PF00487 Fatty acid desaturase RL_RS07300 PF07690 Major Facilitator Superfamily RL_RS07305 PF03466 LysR substrate binding domain RL_RS07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS07340 PF00166 Chaperonin 10 Kd subunit RL_RS07345 PF00118 TCP-1/cpn60 chaperonin family RL_RS07355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS07355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS07360 PF01261 Xylose isomerase-like TIM barrel RL_RS07365 PF01261 Xylose isomerase-like TIM barrel RL_RS07370 PF00356 Bacterial regulatory proteins, lacI family RL_RS07375 PF13180 PDZ domain RL_RS07380 PF12852 Cupin RL_RS07380 PF12833 Helix-turn-helix domain RL_RS07385 PF00106 short chain dehydrogenase RL_RS07390 PF00392 Bacterial regulatory proteins, gntR family RL_RS07390 PF00155 Aminotransferase class I and II RL_RS07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS07400 PF03466 LysR substrate binding domain RL_RS07405 PF02798 Glutathione S-transferase, N-terminal domain RL_RS07420 PF00440 Bacterial regulatory proteins, tetR family RL_RS07445 PF00072 Response regulator receiver domain RL_RS07445 PF00486 Transcriptional regulatory protein, C terminal RL_RS07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS07465 PF03100 CcmE RL_RS07470 PF01578 Cytochrome C assembly protein RL_RS07470 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal RL_RS07475 PF03918 Cytochrome C biogenesis protein RL_RS07480 PF13180 PDZ domain RL_RS07485 PF00486 Transcriptional regulatory protein, C terminal RL_RS07485 PF00072 Response regulator receiver domain RL_RS07490 PF00672 HAMP domain RL_RS07490 PF00512 His Kinase A (phospho-acceptor) domain RL_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS07495 PF03710 Glutamate-ammonia ligase adenylyltransferase RL_RS07495 PF08335 GlnD PII-uridylyltransferase RL_RS07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS07505 PF00989 PAS fold RL_RS07505 PF00512 His Kinase A (phospho-acceptor) domain RL_RS07510 PF01433 Peptidase family M1 domain RL_RS07510 PF17432 Domain of unknown function (DUF3458_C) ARM repeats RL_RS07510 PF11940 Domain of unknown function (DUF3458) Ig-like fold RL_RS07515 PF17202 Single cache domain 3 RL_RS07515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS07515 PF00672 HAMP domain RL_RS07540 PF00012 Hsp70 protein RL_RS07545 PF00873 AcrB/AcrD/AcrF family RL_RS07550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS07560 PF00106 short chain dehydrogenase RL_RS07570 PF03734 L,D-transpeptidase catalytic domain RL_RS07570 PF01476 LysM domain RL_RS07570 PF17969 L,D-transpeptidase C-terminal domain RL_RS07580 PF01037 Lrp/AsnC ligand binding domain RL_RS07585 PF03448 MgtE intracellular N domain RL_RS07585 PF01769 Divalent cation transporter RL_RS07585 PF00571 CBS domain RL_RS07590 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS07590 PF00107 Zinc-binding dehydrogenase RL_RS07595 PF01638 HxlR-like helix-turn-helix RL_RS07600 PF07690 Major Facilitator Superfamily RL_RS07605 PF00781 Diacylglycerol kinase catalytic domain RL_RS07610 PF00120 Glutamine synthetase, catalytic domain RL_RS07615 PF00202 Aminotransferase class-III RL_RS07620 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RL_RS07625 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RL_RS07630 PF00535 Glycosyl transferase family 2 RL_RS07635 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RL_RS07645 PF08281 Sigma-70, region 4 RL_RS07645 PF04542 Sigma-70 region 2 RL_RS07655 PF03795 YCII-related domain RL_RS07660 PF03795 YCII-related domain RL_RS07670 PF01048 Phosphorylase superfamily RL_RS07670 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus RL_RS07690 PF01609 Transposase DDE domain RL_RS07695 PF00155 Aminotransferase class I and II RL_RS07750 PF04962 KduI/IolB family RL_RS07755 PF01261 Xylose isomerase-like TIM barrel RL_RS07760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RL_RS07760 PF00205 Thiamine pyrophosphate enzyme, central domain RL_RS07760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RL_RS07765 PF00294 pfkB family carbohydrate kinase RL_RS07775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS07775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS07780 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS07780 PF14759 Reductase C-terminal RL_RS07790 PF02530 Porin subfamily RL_RS07805 PF00701 Dihydrodipicolinate synthetase family RL_RS07810 PF01668 SmpB protein RL_RS07820 PF01192 RNA polymerase Rpb6 RL_RS07825 PF02824 TGS domain RL_RS07825 PF13291 ACT domain RL_RS07825 PF04607 Region found in RelA / SpoT proteins RL_RS07835 PF01648 4'-phosphopantetheinyl transferase superfamily RL_RS07840 PF10502 Signal peptidase, peptidase S26 RL_RS07845 PF00035 Double-stranded RNA binding motif RL_RS07845 PF14622 Ribonuclease-III-like RL_RS07850 PF07650 KH domain RL_RS07850 PF01926 50S ribosome-binding GTPase RL_RS07855 PF13545 Crp-like helix-turn-helix domain RL_RS07855 PF00027 Cyclic nucleotide-binding domain RL_RS07865 PF02565 Recombination protein O C terminal RL_RS07865 PF11967 Recombination protein O N terminal RL_RS07870 PF00248 Aldo/keto reductase family RL_RS07880 PF01966 HD domain RL_RS07885 PF00563 EAL domain RL_RS07885 PF00990 Diguanylate cyclase, GGDEF domain RL_RS07885 PF03707 Bacterial signalling protein N terminal repeat RL_RS07885 PF13188 PAS domain RL_RS07895 PF00080 Copper/zinc superoxide dismutase (SODC) RL_RS07900 PF00924 Mechanosensitive ion channel RL_RS07900 PF05552 Conserved TM helix RL_RS07910 PF01966 HD domain RL_RS07915 PF01571 Aminomethyltransferase folate-binding domain RL_RS07935 PF00293 NUDIX domain RL_RS07940 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RL_RS07950 PF01066 CDP-alcohol phosphatidyltransferase RL_RS07955 PF02666 Phosphatidylserine decarboxylase RL_RS07960 PF00005 ABC transporter RL_RS07960 PF00664 ABC transporter transmembrane region RL_RS07970 PF03641 Possible lysine decarboxylase RL_RS07975 PF00892 EamA-like transporter family RL_RS07980 PF00682 HMGL-like RL_RS07980 PF08502 LeuA allosteric (dimerisation) domain RL_RS07985 PF00561 alpha/beta hydrolase fold RL_RS08005 PF01406 tRNA synthetases class I (C) catalytic domain RL_RS08010 PF01183 Glycosyl hydrolases family 25 RL_RS08015 PF00106 short chain dehydrogenase RL_RS08020 PF13537 Glutamine amidotransferase domain RL_RS08020 PF00156 Phosphoribosyl transferase domain RL_RS08025 PF02674 Colicin V production protein RL_RS08030 PF18073 Rubredoxin metal binding domain RL_RS08030 PF06745 KaiC RL_RS08035 PF01810 LysE type translocator RL_RS08040 PF01168 Alanine racemase, N-terminal domain RL_RS08040 PF00842 Alanine racemase, C-terminal domain RL_RS08045 PF03796 DnaB-like helicase C terminal domain RL_RS08045 PF00772 DnaB-like helicase N terminal domain RL_RS08050 PF03948 Ribosomal protein L9, C-terminal domain RL_RS08050 PF01281 Ribosomal protein L9, N-terminal domain RL_RS08060 PF01084 Ribosomal protein S18 RL_RS08065 PF01250 Ribosomal protein S6 RL_RS08070 PF00248 Aldo/keto reductase family RL_RS08075 PF00698 Acyl transferase domain RL_RS08085 PF00550 Phosphopantetheine attachment site RL_RS08090 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS08090 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS08095 PF02618 YceG-like family RL_RS08100 PF08340 Domain of unknown function (DUF1732) RL_RS08100 PF03755 YicC-like family, N-terminal region RL_RS08105 PF00625 Guanylate kinase RL_RS08110 PF00398 Ribosomal RNA adenine dimethylase RL_RS08115 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RL_RS08125 PF03968 OstA-like protein RL_RS08125 PF04453 LPS transport system D RL_RS08140 PF01569 PAP2 superfamily RL_RS08145 PF02789 Cytosol aminopeptidase family, N-terminal domain RL_RS08145 PF00883 Cytosol aminopeptidase family, catalytic domain RL_RS08160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS08165 PF00326 Prolyl oligopeptidase family RL_RS08165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain RL_RS08170 PF12848 ABC transporter RL_RS08170 PF00005 ABC transporter RL_RS08175 PF17151 Periplasmic sensor domain RL_RS08175 PF00990 Diguanylate cyclase, GGDEF domain RL_RS08185 PF13417 Glutathione S-transferase, N-terminal domain RL_RS08190 PF00334 Nucleoside diphosphate kinase RL_RS08210 PF02391 MoaE protein RL_RS08220 PF01066 CDP-alcohol phosphatidyltransferase RL_RS08225 PF01541 GIY-YIG catalytic domain RL_RS08225 PF12826 Helix-hairpin-helix motif RL_RS08225 PF02151 UvrB/uvrC motif RL_RS08225 PF08459 UvrC Helix-hairpin-helix N-terminal RL_RS08235 PF13505 Outer membrane protein beta-barrel domain RL_RS08245 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ RL_RS08250 PF00384 Molybdopterin oxidoreductase RL_RS08250 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RL_RS08250 PF01568 Molydopterin dinucleotide binding domain RL_RS08255 PF00293 NUDIX domain RL_RS08260 PF07969 Amidohydrolase family RL_RS08265 PF00551 Formyl transferase RL_RS08270 PF02769 AIR synthase related protein, C-terminal domain RL_RS08270 PF00586 AIR synthase related protein, N-terminal domain RL_RS08275 PF01594 AI-2E family transporter RL_RS08285 PF17941 Polyphosphate kinase C-terminal domain 1 RL_RS08285 PF13090 Polyphosphate kinase C-terminal domain 2 RL_RS08285 PF02503 Polyphosphate kinase middle domain RL_RS08285 PF13089 Polyphosphate kinase N-terminal domain RL_RS08300 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS08305 PF01612 3'-5' exonuclease RL_RS08305 PF00570 HRDC domain RL_RS08310 PF07731 Multicopper oxidase RL_RS08310 PF00394 Multicopper oxidase RL_RS08310 PF07732 Multicopper oxidase RL_RS08315 PF00152 tRNA synthetases class II (D, K and N) RL_RS08315 PF01336 OB-fold nucleic acid binding domain RL_RS08315 PF02938 GAD domain RL_RS08320 PF00144 Beta-lactamase RL_RS08325 PF00440 Bacterial regulatory proteins, tetR family RL_RS08335 PF00521 DNA gyrase/topoisomerase IV, subunit A RL_RS08335 PF03989 DNA gyrase C-terminal domain, beta-propeller RL_RS08350 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RL_RS08360 PF04376 Arginine-tRNA-protein transferase, N terminus RL_RS08360 PF04377 Arginine-tRNA-protein transferase, C terminus RL_RS08370 PF00490 Delta-aminolevulinic acid dehydratase RL_RS08395 PF00464 Serine hydroxymethyltransferase RL_RS08400 PF03477 ATP cone domain RL_RS08405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RL_RS08405 PF01872 RibD C-terminal domain RL_RS08410 PF00677 Lumazine binding domain RL_RS08415 PF00483 Nucleotidyl transferase RL_RS08420 PF04321 RmlD substrate binding domain RL_RS08425 PF16363 GDP-mannose 4,6 dehydratase RL_RS08430 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RL_RS08460 PF00885 6,7-dimethyl-8-ribityllumazine synthase RL_RS08465 PF01029 NusB family RL_RS08470 PF03030 Inorganic H+ pyrophosphatase RL_RS08490 PF02504 Fatty acid synthesis protein RL_RS08495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RL_RS08495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RL_RS08500 PF00216 Bacterial DNA-binding protein RL_RS08505 PF13411 MerR HTH family regulatory protein RL_RS08515 PF13188 PAS domain RL_RS08515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS08515 PF08448 PAS fold RL_RS08515 PF00072 Response regulator receiver domain RL_RS08515 PF00512 His Kinase A (phospho-acceptor) domain RL_RS08530 PF07238 PilZ domain RL_RS08530 PF00535 Glycosyl transferase family 2 RL_RS08540 PF01270 Glycosyl hydrolases family 8 RL_RS08550 PF13419 Haloacid dehalogenase-like hydrolase RL_RS08590 PF00480 ROK family RL_RS08605 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS08610 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS08620 PF02397 Bacterial sugar transferase RL_RS08625 PF00534 Glycosyl transferases group 1 RL_RS08625 PF13439 Glycosyltransferase Family 4 RL_RS08635 PF02706 Chain length determinant protein RL_RS08650 PF02628 Cytochrome oxidase assembly protein RL_RS08660 PF01118 Semialdehyde dehydrogenase, NAD binding domain RL_RS08665 PF00491 Arginase family RL_RS08670 PF07690 Major Facilitator Superfamily RL_RS08675 PF00380 Ribosomal protein S9/S16 RL_RS08680 PF00572 Ribosomal protein L13 RL_RS08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS08685 PF03466 LysR substrate binding domain RL_RS08695 PF00378 Enoyl-CoA hydratase/isomerase RL_RS08710 PF13380 CoA binding domain RL_RS08715 PF01053 Cys/Met metabolism PLP-dependent enzyme RL_RS08725 PF00563 EAL domain RL_RS08725 PF00990 Diguanylate cyclase, GGDEF domain RL_RS08725 PF08447 PAS fold RL_RS08725 PF08448 PAS fold RL_RS08730 PF12849 PBP superfamily domain RL_RS08735 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS08740 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS08745 PF00005 ABC transporter RL_RS08750 PF00067 Cytochrome P450 RL_RS08755 PF00990 Diguanylate cyclase, GGDEF domain RL_RS08755 PF17151 Periplasmic sensor domain RL_RS08760 PF00574 Clp protease RL_RS08765 PF06689 ClpX C4-type zinc finger RL_RS08765 PF10431 C-terminal, D2-small domain, of ClpB protein RL_RS08765 PF07724 AAA domain (Cdc48 subfamily) RL_RS08770 PF02190 ATP-dependent protease La (LON) substrate-binding domain RL_RS08770 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS08770 PF05362 Lon protease (S16) C-terminal proteolytic domain RL_RS08775 PF00216 Bacterial DNA-binding protein RL_RS08780 PF00892 EamA-like transporter family RL_RS08790 PF00248 Aldo/keto reductase family RL_RS08810 PF00255 Glutathione peroxidase RL_RS08840 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RL_RS08845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RL_RS08850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RL_RS08855 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RL_RS08870 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RL_RS08870 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RL_RS08870 PF10531 SLBB domain RL_RS08875 PF00829 Ribosomal prokaryotic L21 protein RL_RS08880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RL_RS08880 PF00384 Molybdopterin oxidoreductase RL_RS08880 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal RL_RS08885 PF00146 NADH dehydrogenase RL_RS08890 PF12838 4Fe-4S dicluster domain RL_RS08895 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RL_RS08900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RL_RS08905 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RL_RS08905 PF00361 Proton-conducting membrane transporter RL_RS08910 PF00361 Proton-conducting membrane transporter RL_RS08910 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus RL_RS08915 PF00361 Proton-conducting membrane transporter RL_RS08920 PF02237 Biotin protein ligase C terminal domain RL_RS08920 PF08279 HTH domain RL_RS08920 PF03099 Biotin/lipoate A/B protein ligase family RL_RS08925 PF17770 Ribonuclease J C-terminal domain RL_RS08925 PF12706 Beta-lactamase superfamily domain RL_RS08925 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RL_RS08940 PF03129 Anticodon binding domain RL_RS08940 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RL_RS08945 PF02687 FtsX-like permease family RL_RS08945 PF12704 MacB-like periplasmic core domain RL_RS08950 PF00005 ABC transporter RL_RS08965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RL_RS08965 PF02811 PHP domain RL_RS08965 PF07733 Bacterial DNA polymerase III alpha NTPase domain RL_RS08965 PF14579 Helix-hairpin-helix motif RL_RS08975 PF11799 impB/mucB/samB family C-terminal domain RL_RS08975 PF00817 impB/mucB/samB family RL_RS08995 PF00072 Response regulator receiver domain RL_RS09000 PF00990 Diguanylate cyclase, GGDEF domain RL_RS09000 PF00072 Response regulator receiver domain RL_RS09005 PF00471 Ribosomal protein L33 RL_RS09010 PF07690 Major Facilitator Superfamily RL_RS09020 PF17876 Cold shock domain RL_RS09020 PF00773 RNB domain RL_RS09020 PF08206 Ribonuclease B OB domain RL_RS09020 PF08461 Ribonuclease R winged-helix domain RL_RS09020 PF00575 S1 RNA binding domain RL_RS09025 PF01131 DNA topoisomerase RL_RS09025 PF01396 Topoisomerase DNA binding C4 zinc finger RL_RS09025 PF13368 Topoisomerase C-terminal repeat RL_RS09025 PF01751 Toprim domain RL_RS09030 PF02481 DNA recombination-mediator protein A RL_RS09030 PF17782 DprA winged helix domain RL_RS09035 PF02660 Glycerol-3-phosphate acyltransferase RL_RS09040 PF01979 Amidohydrolase family RL_RS09045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RL_RS09045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RL_RS09050 PF18158 Adaptive response protein AidB N-terminal domain RL_RS09050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RL_RS09050 PF02770 Acyl-CoA dehydrogenase, middle domain RL_RS09055 PF00575 S1 RNA binding domain RL_RS09055 PF10150 Ribonuclease E/G family RL_RS09055 PF12111 Polyribonucleotide phosphorylase C terminal RL_RS09060 PF01520 N-acetylmuramoyl-L-alanine amidase RL_RS09060 PF11741 AMIN domain RL_RS09065 PF00905 Penicillin binding protein transpeptidase domain RL_RS09065 PF17092 Penicillin-binding protein OB-like domain RL_RS09065 PF00912 Transglycosylase RL_RS09070 PF03462 PCRF domain RL_RS09070 PF00472 RF-1 domain RL_RS09075 PF00005 ABC transporter RL_RS09080 PF02653 Branched-chain amino acid transport system / permease component RL_RS09085 PF13407 Periplasmic binding protein domain RL_RS09095 PF02733 Dak1 domain RL_RS09100 PF02734 DAK2 domain RL_RS09105 PF13936 Helix-turn-helix domain RL_RS09105 PF04198 Putative sugar-binding domain RL_RS09110 PF02733 Dak1 domain RL_RS09115 PF02734 DAK2 domain RL_RS09130 PF01513 ATP-NAD kinase RL_RS09145 PF08032 RNA 2'-O ribose methyltransferase substrate binding RL_RS09145 PF00588 SpoU rRNA Methylase family RL_RS09160 PF00009 Elongation factor Tu GTP binding domain RL_RS09160 PF03143 Elongation factor Tu C-terminal domain RL_RS09160 PF03144 Elongation factor Tu domain 2 RL_RS09165 PF08485 Polysaccharide biosynthesis protein C-terminal RL_RS09165 PF02719 Polysaccharide biosynthesis protein RL_RS09175 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RL_RS09180 PF02357 Transcription termination factor nusG RL_RS09180 PF00467 KOW motif RL_RS09185 PF03946 Ribosomal protein L11, N-terminal domain RL_RS09185 PF00298 Ribosomal protein L11, RNA binding domain RL_RS09190 PF00687 Ribosomal protein L1p/L10e family RL_RS09195 PF00466 Ribosomal protein L10 RL_RS09200 PF16320 Ribosomal protein L7/L12 dimerisation domain RL_RS09200 PF00542 Ribosomal protein L7/L12 C-terminal domain RL_RS09205 PF04560 RNA polymerase Rpb2, domain 7 RL_RS09205 PF04565 RNA polymerase Rpb2, domain 3 RL_RS09205 PF04561 RNA polymerase Rpb2, domain 2 RL_RS09205 PF04563 RNA polymerase beta subunit RL_RS09205 PF10385 RNA polymerase beta subunit external 1 domain RL_RS09205 PF00562 RNA polymerase Rpb2, domain 6 RL_RS09210 PF05000 RNA polymerase Rpb1, domain 4 RL_RS09210 PF04983 RNA polymerase Rpb1, domain 3 RL_RS09210 PF00623 RNA polymerase Rpb1, domain 2 RL_RS09210 PF04998 RNA polymerase Rpb1, domain 5 RL_RS09210 PF04997 RNA polymerase Rpb1, domain 1 RL_RS09220 PF00164 Ribosomal protein S12/S23 RL_RS09225 PF00177 Ribosomal protein S7p/S5e RL_RS09230 PF03144 Elongation factor Tu domain 2 RL_RS09230 PF00679 Elongation factor G C-terminus RL_RS09230 PF00009 Elongation factor Tu GTP binding domain RL_RS09230 PF14492 Elongation Factor G, domain II RL_RS09230 PF03764 Elongation factor G, domain IV RL_RS09235 PF03143 Elongation factor Tu C-terminal domain RL_RS09235 PF03144 Elongation factor Tu domain 2 RL_RS09235 PF00009 Elongation factor Tu GTP binding domain RL_RS09240 PF00338 Ribosomal protein S10p/S20e RL_RS09245 PF00297 Ribosomal protein L3 RL_RS09250 PF00573 Ribosomal protein L4/L1 family RL_RS09255 PF00276 Ribosomal protein L23 RL_RS09260 PF03947 Ribosomal Proteins L2, C-terminal domain RL_RS09260 PF00181 Ribosomal Proteins L2, RNA binding domain RL_RS09265 PF00203 Ribosomal protein S19 RL_RS09270 PF00237 Ribosomal protein L22p/L17e RL_RS09275 PF00189 Ribosomal protein S3, C-terminal domain RL_RS09275 PF07650 KH domain RL_RS09280 PF00252 Ribosomal protein L16p/L10e RL_RS09285 PF00831 Ribosomal L29 protein RL_RS09290 PF00366 Ribosomal protein S17 RL_RS09295 PF00238 Ribosomal protein L14p/L23e RL_RS09300 PF00467 KOW motif RL_RS09300 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RL_RS09305 PF00281 Ribosomal protein L5 RL_RS09305 PF00673 ribosomal L5P family C-terminus RL_RS09310 PF00253 Ribosomal protein S14p/S29e RL_RS09315 PF00410 Ribosomal protein S8 RL_RS09320 PF00347 Ribosomal protein L6 RL_RS09325 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RL_RS09330 PF00333 Ribosomal protein S5, N-terminal domain RL_RS09330 PF03719 Ribosomal protein S5, C-terminal domain RL_RS09335 PF00327 Ribosomal protein L30p/L7e RL_RS09340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RL_RS09345 PF00344 SecY translocase RL_RS09350 PF05191 Adenylate kinase, active site lid RL_RS09355 PF00416 Ribosomal protein S13/S18 RL_RS09360 PF00411 Ribosomal protein S11 RL_RS09365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RL_RS09365 PF01000 RNA polymerase Rpb3/RpoA insert domain RL_RS09365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RL_RS09370 PF01196 Ribosomal protein L17 RL_RS09380 PF01794 Ferric reductase like transmembrane component RL_RS09385 PF00174 Oxidoreductase molybdopterin binding domain RL_RS09390 PF00920 Dehydratase family RL_RS09405 PF00595 PDZ domain RL_RS09410 PF16193 AAA C-terminal domain RL_RS09410 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS09410 PF12002 MgsA AAA+ ATPase C terminal RL_RS09430 PF00701 Dihydrodipicolinate synthetase family RL_RS09435 PF00364 Biotin-requiring enzyme RL_RS09435 PF00561 alpha/beta hydrolase fold RL_RS09440 PF02558 Ketopantoate reductase PanE/ApbA RL_RS09440 PF08546 Ketopantoate reductase PanE/ApbA C terminal RL_RS09445 PF00106 short chain dehydrogenase RL_RS09450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS09450 PF03466 LysR substrate binding domain RL_RS09460 PF07859 alpha/beta hydrolase fold RL_RS09470 PF00512 His Kinase A (phospho-acceptor) domain RL_RS09470 PF18698 Histidine kinase sensor domain RL_RS09470 PF00672 HAMP domain RL_RS09470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS09470 PF00989 PAS fold RL_RS09480 PF00356 Bacterial regulatory proteins, lacI family RL_RS09485 PF01144 Coenzyme A transferase RL_RS09490 PF00378 Enoyl-CoA hydratase/isomerase RL_RS09495 PF00171 Aldehyde dehydrogenase family RL_RS09500 PF01547 Bacterial extracellular solute-binding protein RL_RS09505 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS09510 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS09515 PF00005 ABC transporter RL_RS09515 PF17912 MalK OB fold domain RL_RS09525 PF05199 GMC oxidoreductase RL_RS09525 PF00732 GMC oxidoreductase RL_RS09530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS09530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS09535 PF00890 FAD binding domain RL_RS09535 PF02910 Fumarate reductase flavoprotein C-term RL_RS09560 PF00072 Response regulator receiver domain RL_RS09560 PF00196 Bacterial regulatory proteins, luxR family RL_RS09565 PF05384 Sensor protein DegS RL_RS09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS09565 PF07730 Histidine kinase RL_RS09575 PF01209 ubiE/COQ5 methyltransferase family RL_RS09595 PF07886 BA14K-like protein RL_RS09605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS09605 PF03466 LysR substrate binding domain RL_RS09615 PF00196 Bacterial regulatory proteins, luxR family RL_RS09615 PF00072 Response regulator receiver domain RL_RS09620 PF00196 Bacterial regulatory proteins, luxR family RL_RS09625 PF06441 Epoxide hydrolase N terminus RL_RS09635 PF00857 Isochorismatase family RL_RS09675 PF00082 Subtilase family RL_RS09685 PF00351 Biopterin-dependent aromatic amino acid hydroxylase RL_RS09690 PF01037 Lrp/AsnC ligand binding domain RL_RS09695 PF01037 Lrp/AsnC ligand binding domain RL_RS09700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS09705 PF04209 homogentisate 1,2-dioxygenase RL_RS09715 PF02798 Glutathione S-transferase, N-terminal domain RL_RS09715 PF14497 Glutathione S-transferase, C-terminal domain RL_RS09730 PF00690 Cation transporter/ATPase, N-terminus RL_RS09730 PF00689 Cation transporting ATPase, C-terminus RL_RS09740 PF00403 Heavy-metal-associated domain RL_RS09770 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS09775 PF13180 PDZ domain RL_RS09775 PF00595 PDZ domain RL_RS09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS09790 PF00072 Response regulator receiver domain RL_RS09790 PF13426 PAS domain RL_RS09795 PF00325 Bacterial regulatory proteins, crp family RL_RS09795 PF00027 Cyclic nucleotide-binding domain RL_RS09800 PF00486 Transcriptional regulatory protein, C terminal RL_RS09800 PF00072 Response regulator receiver domain RL_RS09810 PF00011 Hsp20/alpha crystallin family RL_RS09820 PF00753 Metallo-beta-lactamase superfamily RL_RS09820 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RL_RS09820 PF10996 Beta-Casp domain RL_RS09830 PF00871 Acetokinase family RL_RS09845 PF00394 Multicopper oxidase RL_RS09845 PF07732 Multicopper oxidase RL_RS09845 PF07731 Multicopper oxidase RL_RS09860 PF04945 YHS domain RL_RS09895 PF00665 Integrase core domain RL_RS09895 PF09299 Mu transposase, C-terminal RL_RS09930 PF00924 Mechanosensitive ion channel RL_RS09940 PF03781 Sulfatase-modifying factor enzyme 1 RL_RS09945 PF00884 Sulfatase RL_RS09955 PF00092 von Willebrand factor type A domain RL_RS09955 PF07584 Aerotolerance regulator N-terminal RL_RS09970 PF01882 Protein of unknown function DUF58 RL_RS09975 PF17863 AAA lid domain RL_RS09975 PF07726 ATPase family associated with various cellular activities (AAA) RL_RS09980 PF00884 Sulfatase RL_RS10025 PF13018 Extended Signal Peptide of Type V secretion system RL_RS10025 PF16168 Adhesin of bacterial autotransporter system, probable stalk RL_RS10025 PF03797 Autotransporter beta-domain RL_RS10040 PF17862 AAA+ lid domain RL_RS10040 PF01434 Peptidase family M41 RL_RS10040 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS10050 PF00145 C-5 cytosine-specific DNA methylase RL_RS10075 PF00149 Calcineurin-like phosphoesterase RL_RS10110 PF02867 Ribonucleotide reductase, barrel domain RL_RS10110 PF08471 Class II vitamin B12-dependent ribonucleotide reductase RL_RS10120 PF00156 Phosphoribosyl transferase domain RL_RS10130 PF02464 Competence-damaged protein RL_RS10130 PF18146 Damage-inducible protein CinA KH domain RL_RS10130 PF00994 Probable molybdopterin binding domain RL_RS10135 PF03358 NADPH-dependent FMN reductase RL_RS10150 PF00585 C-terminal regulatory domain of Threonine dehydratase RL_RS10150 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS10160 PF00990 Diguanylate cyclase, GGDEF domain RL_RS10180 PF02525 Flavodoxin-like fold RL_RS10185 PF03466 LysR substrate binding domain RL_RS10185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS10190 PF02872 5'-nucleotidase, C-terminal domain RL_RS10190 PF00149 Calcineurin-like phosphoesterase RL_RS10210 PF01037 Lrp/AsnC ligand binding domain RL_RS10215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RL_RS10215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RL_RS10220 PF12833 Helix-turn-helix domain RL_RS10225 PF00106 short chain dehydrogenase RL_RS10245 PF01548 Transposase RL_RS10245 PF02371 Transposase IS116/IS110/IS902 family RL_RS10260 PF00581 Rhodanese-like domain RL_RS10265 PF02272 DHHA1 domain RL_RS10265 PF01411 tRNA synthetases class II (A) RL_RS10265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RL_RS10270 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS10275 PF12973 ChrR Cupin-like domain RL_RS10280 PF00106 short chain dehydrogenase RL_RS10300 PF03441 FAD binding domain of DNA photolyase RL_RS10300 PF00875 DNA photolyase RL_RS10315 PF13419 Haloacid dehalogenase-like hydrolase RL_RS10320 PF01568 Molydopterin dinucleotide binding domain RL_RS10320 PF04324 BFD-like [2Fe-2S] binding domain RL_RS10320 PF00384 Molybdopterin oxidoreductase RL_RS10320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RL_RS10330 PF04324 BFD-like [2Fe-2S] binding domain RL_RS10330 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS10330 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RL_RS10330 PF18267 Rubredoxin NAD+ reductase C-terminal domain RL_RS10330 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RL_RS10335 PF07690 Major Facilitator Superfamily RL_RS10345 PF03861 ANTAR domain RL_RS10345 PF08376 Nitrate and nitrite sensing RL_RS10350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RL_RS10350 PF00356 Bacterial regulatory proteins, lacI family RL_RS10355 PF13407 Periplasmic binding protein domain RL_RS10360 PF00005 ABC transporter RL_RS10365 PF02653 Branched-chain amino acid transport system / permease component RL_RS10370 PF02653 Branched-chain amino acid transport system / permease component RL_RS10375 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RL_RS10375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RL_RS10380 PF03480 Bacterial extracellular solute-binding protein, family 7 RL_RS10395 PF10417 C-terminal domain of 1-Cys peroxiredoxin RL_RS10395 PF00578 AhpC/TSA family RL_RS10400 PF07722 Peptidase C26 RL_RS10405 PF00043 Glutathione S-transferase, C-terminal domain RL_RS10405 PF02798 Glutathione S-transferase, N-terminal domain RL_RS10420 PF05161 MOFRL family RL_RS10420 PF13660 Domain of unknown function (DUF4147) RL_RS10430 PF00005 ABC transporter RL_RS10430 PF08402 TOBE domain RL_RS10435 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS10440 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS10450 PF13382 Adenine deaminase C-terminal domain RL_RS10450 PF01979 Amidohydrolase family RL_RS10475 PF00005 ABC transporter RL_RS10490 PF10503 Esterase PHB depolymerase RL_RS10495 PF00199 Catalase RL_RS10495 PF18011 C-terminal domain found in long catalases RL_RS10495 PF06628 Catalase-related immune-responsive RL_RS10560 PF10458 Valyl tRNA synthetase tRNA binding arm RL_RS10560 PF00133 tRNA synthetases class I (I, L, M and V) RL_RS10560 PF08264 Anticodon-binding domain of tRNA RL_RS10575 PF08238 Sel1 repeat RL_RS10585 PF01521 Iron-sulphur cluster biosynthesis RL_RS10590 PF13286 Phosphohydrolase-associated domain RL_RS10590 PF01966 HD domain RL_RS10595 PF00750 tRNA synthetases class I (R) RL_RS10595 PF05746 DALR anticodon binding domain RL_RS10595 PF03485 Arginyl tRNA synthetase N terminal domain RL_RS10605 PF00933 Glycosyl hydrolase family 3 N terminal domain RL_RS10610 PF02616 Segregation and condensation protein ScpA RL_RS10615 PF04079 Segregation and condensation complex subunit ScpB RL_RS10620 PF02416 mttA/Hcf106 family RL_RS10625 PF02416 mttA/Hcf106 family RL_RS10630 PF00902 Sec-independent protein translocase protein (TatC) RL_RS10635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RL_RS10635 PF02403 Seryl-tRNA synthetase N-terminal domain RL_RS10640 PF01975 Survival protein SurE RL_RS10650 PF01476 LysM domain RL_RS10650 PF01551 Peptidase family M23 RL_RS10660 PF02699 Preprotein translocase subunit RL_RS10665 PF07549 SecD/SecF GG Motif RL_RS10665 PF02355 Protein export membrane protein RL_RS10685 PF01134 Glucose inhibited division protein A RL_RS10705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RL_RS10705 PF05697 Bacterial trigger factor protein (TF) RL_RS10705 PF05698 Bacterial trigger factor protein (TF) C-terminus RL_RS10715 PF04055 Radical SAM superfamily RL_RS10715 PF02310 B12 binding domain RL_RS10715 PF13282 Domain of unknown function (DUF4070) RL_RS10725 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS10725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RL_RS10730 PF01070 FMN-dependent dehydrogenase RL_RS10735 PF04002 RadC-like JAB domain RL_RS10740 PF00557 Metallopeptidase family M24 RL_RS10760 PF03652 Holliday junction resolvase RL_RS10770 PF02686 Glu-tRNAGln amidotransferase C subunit RL_RS10775 PF01425 Amidase RL_RS10780 PF00583 Acetyltransferase (GNAT) family RL_RS10790 PF09857 Putative toxin of bacterial toxin-antitoxin pair RL_RS10805 PF02637 GatB domain RL_RS10805 PF02934 GatB/GatE catalytic domain RL_RS10825 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) RL_RS10830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RL_RS10835 PF02785 Biotin carboxylase C-terminal domain RL_RS10835 PF00289 Biotin carboxylase, N-terminal domain RL_RS10835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RL_RS10840 PF00364 Biotin-requiring enzyme RL_RS10845 PF01220 Dehydroquinase class II RL_RS10855 PF00155 Aminotransferase class I and II RL_RS10865 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus RL_RS10875 PF00155 Aminotransferase class I and II RL_RS10880 PF03447 Homoserine dehydrogenase, NAD binding domain RL_RS10880 PF01842 ACT domain RL_RS10880 PF00742 Homoserine dehydrogenase RL_RS10890 PF01368 DHH family RL_RS10890 PF17768 RecJ OB domain RL_RS10890 PF02272 DHHA1 domain RL_RS10915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS10920 PF00313 'Cold-shock' DNA-binding domain RL_RS10975 PF00817 impB/mucB/samB family RL_RS10975 PF11798 IMS family HHH motif RL_RS10975 PF11799 impB/mucB/samB family C-terminal domain RL_RS11000 PF02811 PHP domain RL_RS11000 PF07733 Bacterial DNA polymerase III alpha NTPase domain RL_RS11000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RL_RS11000 PF14579 Helix-hairpin-helix motif RL_RS11085 PF05717 IS66 Orf2 like protein RL_RS11090 PF03050 Transposase IS66 family RL_RS11090 PF13007 Transposase C of IS166 homeodomain RL_RS11090 PF13005 zinc-finger binding domain of transposase IS66 RL_RS11090 PF13817 IS66 C-terminal element RL_RS11110 PF13817 IS66 C-terminal element RL_RS11110 PF03050 Transposase IS66 family RL_RS11110 PF13007 Transposase C of IS166 homeodomain RL_RS11110 PF13005 zinc-finger binding domain of transposase IS66 RL_RS11120 PF02735 Ku70/Ku80 beta-barrel domain RL_RS11125 PF02735 Ku70/Ku80 beta-barrel domain RL_RS11160 PF02371 Transposase IS116/IS110/IS902 family RL_RS11160 PF01548 Transposase RL_RS11240 PF02796 Helix-turn-helix domain of resolvase RL_RS11240 PF00239 Resolvase, N terminal domain RL_RS11295 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS11295 PF17862 AAA+ lid domain RL_RS11295 PF01434 Peptidase family M41 RL_RS11335 PF17862 AAA+ lid domain RL_RS11335 PF06480 FtsH Extracellular RL_RS11335 PF01434 Peptidase family M41 RL_RS11335 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS11410 PF00005 ABC transporter RL_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS11425 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS11430 PF01053 Cys/Met metabolism PLP-dependent enzyme RL_RS11435 PF01494 FAD binding domain RL_RS11445 PF00561 alpha/beta hydrolase fold RL_RS11450 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS11450 PF06426 Serine acetyltransferase, N-terminal RL_RS11465 PF02617 ATP-dependent Clp protease adaptor protein ClpS RL_RS11470 PF02861 Clp amino terminal domain, pathogenicity island component RL_RS11470 PF17871 AAA lid domain RL_RS11470 PF07724 AAA domain (Cdc48 subfamily) RL_RS11470 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS11470 PF10431 C-terminal, D2-small domain, of ClpB protein RL_RS11480 PF01230 HIT domain RL_RS11505 PF00318 Ribosomal protein S2 RL_RS11510 PF00889 Elongation factor TS RL_RS11515 PF00696 Amino acid kinase family RL_RS11520 PF01765 Ribosome recycling factor RL_RS11525 PF01255 Putative undecaprenyl diphosphate synthase RL_RS11535 PF17820 PDZ domain RL_RS11535 PF02163 Peptidase family M50 RL_RS11540 PF01103 Surface antigen RL_RS11540 PF07244 Surface antigen variable number repeat RL_RS11545 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS11545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RL_RS11550 PF07977 FabA-like domain RL_RS11555 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS11555 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RL_RS11560 PF17930 LpxI N-terminal domain RL_RS11560 PF06230 LpxI C-terminal domain RL_RS11565 PF02684 Lipid-A-disaccharide synthetase RL_RS11570 PF00285 Citrate synthase, C-terminal domain RL_RS11575 PF00753 Metallo-beta-lactamase superfamily RL_RS11575 PF03772 Competence protein RL_RS11580 PF01726 LexA DNA binding domain RL_RS11580 PF00717 Peptidase S24-like RL_RS11590 PF00793 DAHP synthetase I family RL_RS11595 PF00113 Enolase, C-terminal TIM barrel domain RL_RS11595 PF03952 Enolase, N-terminal domain RL_RS11605 PF00676 Dehydrogenase E1 component RL_RS11610 PF02780 Transketolase, C-terminal domain RL_RS11610 PF00364 Biotin-requiring enzyme RL_RS11610 PF02779 Transketolase, pyrimidine binding domain RL_RS11615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RL_RS11615 PF00364 Biotin-requiring enzyme RL_RS11615 PF02817 e3 binding domain RL_RS11630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RL_RS11630 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS11645 PF04055 Radical SAM superfamily RL_RS11645 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RL_RS11660 PF03364 Polyketide cyclase / dehydrase and lipid transport RL_RS11665 PF02464 Competence-damaged protein RL_RS11665 PF18146 Damage-inducible protein CinA KH domain RL_RS11665 PF00994 Probable molybdopterin binding domain RL_RS11670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RL_RS11670 PF02542 YgbB family RL_RS11675 PF01207 Dihydrouridine synthase (Dus) RL_RS11680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS11680 PF00512 His Kinase A (phospho-acceptor) domain RL_RS11685 PF00072 Response regulator receiver domain RL_RS11685 PF00158 Sigma-54 interaction domain RL_RS11685 PF02954 Bacterial regulatory protein, Fis family RL_RS11715 PF00884 Sulfatase RL_RS11725 PF03781 Sulfatase-modifying factor enzyme 1 RL_RS11730 PF00884 Sulfatase RL_RS11755 PF13202 EF hand RL_RS11755 PF00923 Transaldolase/Fructose-6-phosphate aldolase RL_RS11760 PF02424 ApbE family RL_RS11785 PF00486 Transcriptional regulatory protein, C terminal RL_RS11785 PF00072 Response regulator receiver domain RL_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS11790 PF00512 His Kinase A (phospho-acceptor) domain RL_RS11795 PF00248 Aldo/keto reductase family RL_RS11800 PF00989 PAS fold RL_RS11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS11800 PF00512 His Kinase A (phospho-acceptor) domain RL_RS11800 PF00672 HAMP domain RL_RS11805 PF00072 Response regulator receiver domain RL_RS11805 PF02954 Bacterial regulatory protein, Fis family RL_RS11805 PF00158 Sigma-54 interaction domain RL_RS11810 PF01063 Amino-transferase class IV RL_RS11815 PF17209 Hfq protein RL_RS11820 PF16360 GTP-binding GTPase Middle Region RL_RS11820 PF13167 GTP-binding GTPase N-terminal RL_RS11820 PF01926 50S ribosome-binding GTPase RL_RS11825 PF03819 MazG nucleotide pyrophosphohydrolase domain RL_RS11835 PF14824 Sirohaem biosynthesis protein central RL_RS11835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RL_RS11835 PF10414 Sirohaem synthase dimerisation region RL_RS11845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RL_RS11845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RL_RS11855 PF01494 FAD binding domain RL_RS11860 PF03547 Membrane transport protein RL_RS11865 PF00753 Metallo-beta-lactamase superfamily RL_RS11865 PF16123 Hydroxyacylglutathione hydrolase C-terminus RL_RS11870 PF00106 short chain dehydrogenase RL_RS11875 PF00171 Aldehyde dehydrogenase family RL_RS11880 PF03060 Nitronate monooxygenase RL_RS11905 PF02683 Cytochrome C biogenesis protein transmembrane region RL_RS11930 PF05532 CsbD-like RL_RS11975 PF01494 FAD binding domain RL_RS12005 PF01547 Bacterial extracellular solute-binding protein RL_RS12010 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12020 PF17912 MalK OB fold domain RL_RS12020 PF03459 TOBE domain RL_RS12020 PF00005 ABC transporter RL_RS12030 PF13007 Transposase C of IS166 homeodomain RL_RS12030 PF13817 IS66 C-terminal element RL_RS12030 PF03050 Transposase IS66 family RL_RS12030 PF13005 zinc-finger binding domain of transposase IS66 RL_RS12035 PF12146 Serine aminopeptidase, S33 RL_RS12055 PF00701 Dihydrodipicolinate synthetase family RL_RS12065 PF00392 Bacterial regulatory proteins, gntR family RL_RS12065 PF07729 FCD domain RL_RS12070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS12075 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12080 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12085 PF00005 ABC transporter RL_RS12085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS12090 PF00005 ABC transporter RL_RS12090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS12095 PF00356 Bacterial regulatory proteins, lacI family RL_RS12110 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12115 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12120 PF17912 MalK OB fold domain RL_RS12120 PF00005 ABC transporter RL_RS12145 PF03466 LysR substrate binding domain RL_RS12145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12150 PF03466 LysR substrate binding domain RL_RS12150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12160 PF00248 Aldo/keto reductase family RL_RS12170 PF00106 short chain dehydrogenase RL_RS12185 PF04191 Phospholipid methyltransferase RL_RS12200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS12200 PF00529 HlyD membrane-fusion protein of T1SS RL_RS12205 PF00005 ABC transporter RL_RS12205 PF12704 MacB-like periplasmic core domain RL_RS12205 PF02687 FtsX-like permease family RL_RS12210 PF02687 FtsX-like permease family RL_RS12210 PF12704 MacB-like periplasmic core domain RL_RS12210 PF00005 ABC transporter RL_RS12225 PF00970 Oxidoreductase FAD-binding domain RL_RS12225 PF00175 Oxidoreductase NAD-binding domain RL_RS12235 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS12235 PF00107 Zinc-binding dehydrogenase RL_RS12240 PF00005 ABC transporter RL_RS12250 PF02653 Branched-chain amino acid transport system / permease component RL_RS12255 PF02608 ABC transporter substrate-binding protein PnrA-like RL_RS12260 PF13407 Periplasmic binding protein domain RL_RS12265 PF00005 ABC transporter RL_RS12270 PF02653 Branched-chain amino acid transport system / permease component RL_RS12275 PF02653 Branched-chain amino acid transport system / permease component RL_RS12280 PF00392 Bacterial regulatory proteins, gntR family RL_RS12280 PF07729 FCD domain RL_RS12285 PF12804 MobA-like NTP transferase domain RL_RS12285 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS12290 PF01380 SIS domain RL_RS12300 PF00271 Helicase conserved C-terminal domain RL_RS12300 PF17191 RecG wedge domain RL_RS12300 PF00270 DEAD/DEAH box helicase RL_RS12310 PF00270 DEAD/DEAH box helicase RL_RS12310 PF02559 CarD-like/TRCF domain RL_RS12310 PF17757 UvrB interaction domain RL_RS12310 PF03461 TRCF domain RL_RS12310 PF00271 Helicase conserved C-terminal domain RL_RS12325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS12340 PF00120 Glutamine synthetase, catalytic domain RL_RS12340 PF03951 Glutamine synthetase, beta-Grasp domain RL_RS12345 PF00543 Nitrogen regulatory protein P-II RL_RS12350 PF01256 Carbohydrate kinase RL_RS12350 PF03853 YjeF-related protein N-terminus RL_RS12355 PF05661 Protein of unknown function (DUF808) RL_RS12370 PF17755 UvrA DNA-binding domain RL_RS12370 PF17760 UvrA interaction domain RL_RS12375 PF00436 Single-strand binding protein family RL_RS12380 PF01914 MarC family integral membrane protein RL_RS12385 PF03989 DNA gyrase C-terminal domain, beta-propeller RL_RS12385 PF00521 DNA gyrase/topoisomerase IV, subunit A RL_RS12395 PF01467 Cytidylyltransferase-like RL_RS12400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RL_RS12405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RL_RS12410 PF02547 Queuosine biosynthesis protein RL_RS12415 PF01702 Queuine tRNA-ribosyltransferase RL_RS12425 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS12425 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS12430 PF01638 HxlR-like helix-turn-helix RL_RS12445 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RL_RS12445 PF02806 Alpha amylase, C-terminal all-beta domain RL_RS12445 PF00128 Alpha amylase, catalytic domain RL_RS12470 PF17912 MalK OB fold domain RL_RS12470 PF00005 ABC transporter RL_RS12475 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS12485 PF13416 Bacterial extracellular solute-binding protein RL_RS12490 PF00356 Bacterial regulatory proteins, lacI family RL_RS12495 PF00675 Insulinase (Peptidase family M16) RL_RS12495 PF05193 Peptidase M16 inactive domain RL_RS12515 PF00491 Arginase family RL_RS12520 PF02660 Glycerol-3-phosphate acyltransferase RL_RS12525 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS12590 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS12595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RL_RS12595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RL_RS12595 PF00205 Thiamine pyrophosphate enzyme, central domain RL_RS12600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12600 PF03466 LysR substrate binding domain RL_RS12605 PF07286 Protein of unknown function (DUF1445) RL_RS12610 PF07690 Major Facilitator Superfamily RL_RS12615 PF05378 Hydantoinase/oxoprolinase N-terminal region RL_RS12615 PF01968 Hydantoinase/oxoprolinase RL_RS12620 PF00356 Bacterial regulatory proteins, lacI family RL_RS12630 PF00005 ABC transporter RL_RS12635 PF02653 Branched-chain amino acid transport system / permease component RL_RS12650 PF13936 Helix-turn-helix domain RL_RS12655 PF00924 Mechanosensitive ion channel RL_RS12660 PF06441 Epoxide hydrolase N terminus RL_RS12675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12675 PF03466 LysR substrate binding domain RL_RS12685 PF02626 Carboxyltransferase domain, subdomain A and B RL_RS12690 PF02682 Carboxyltransferase domain, subdomain C and D RL_RS12695 PF03746 LamB/YcsF family RL_RS12710 PF13194 Domain of unknown function (DUF4010) RL_RS12725 PF03741 Integral membrane protein TerC family RL_RS12730 PF03099 Biotin/lipoate A/B protein ligase family RL_RS12730 PF12706 Beta-lactamase superfamily domain RL_RS12735 PF01026 TatD related DNase RL_RS12740 PF09334 tRNA synthetases class I (M) RL_RS12740 PF08264 Anticodon-binding domain of tRNA RL_RS12745 PF01925 Sulfite exporter TauE/SafE RL_RS12750 PF09115 DNA polymerase III, delta subunit, C terminal RL_RS12755 PF02223 Thymidylate kinase RL_RS12765 PF05036 Sporulation related domain RL_RS12765 PF03330 Lytic transglycolase RL_RS12780 PF00990 Diguanylate cyclase, GGDEF domain RL_RS12780 PF17151 Periplasmic sensor domain RL_RS12800 PF07690 Major Facilitator Superfamily RL_RS12805 PF03466 LysR substrate binding domain RL_RS12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12810 PF08274 PhnA Zinc-Ribbon RL_RS12810 PF03831 PhnA domain RL_RS12845 PF00591 Glycosyl transferase family, a/b domain RL_RS12845 PF02885 Glycosyl transferase family, helical bundle domain RL_RS12850 PF00218 Indole-3-glycerol phosphate synthase RL_RS12855 PF01967 MoaC family RL_RS12860 PF00994 Probable molybdopterin binding domain RL_RS12860 PF03454 MoeA C-terminal region (domain IV) RL_RS12860 PF03453 MoeA N-terminal region (domain I and II) RL_RS12870 PF00034 Cytochrome c RL_RS12875 PF00111 2Fe-2S iron-sulfur cluster binding domain RL_RS12875 PF01799 [2Fe-2S] binding domain RL_RS12880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RL_RS12885 PF03466 LysR substrate binding domain RL_RS12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RL_RS12895 PF00106 short chain dehydrogenase RL_RS12900 PF13673 Acetyltransferase (GNAT) domain RL_RS12905 PF03880 DbpA RNA binding domain RL_RS12905 PF00271 Helicase conserved C-terminal domain RL_RS12905 PF00270 DEAD/DEAH box helicase RL_RS12920 PF00285 Citrate synthase, C-terminal domain RL_RS12925 PF00285 Citrate synthase, C-terminal domain RL_RS12935 PF00117 Glutamine amidotransferase class-I RL_RS12935 PF06418 CTP synthase N-terminus RL_RS12940 PF03840 Preprotein translocase SecG subunit RL_RS12945 PF00121 Triosephosphate isomerase RL_RS12955 PF00204 DNA gyrase B RL_RS12955 PF00986 DNA gyrase B subunit, carboxyl terminus RL_RS12955 PF01751 Toprim domain RL_RS12955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS12960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS12960 PF03466 LysR substrate binding domain RL_RS12970 PF00698 Acyl transferase domain RL_RS12970 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS12970 PF08990 Erythronolide synthase docking RL_RS12970 PF09277 Erythronolide synthase, docking RL_RS12970 PF16197 Ketoacyl-synthetase C-terminal extension RL_RS12970 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS12970 PF14765 Polyketide synthase dehydratase RL_RS12970 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS12970 PF08659 KR domain RL_RS12970 PF00550 Phosphopantetheine attachment site RL_RS12980 PF01594 AI-2E family transporter RL_RS12985 PF00583 Acetyltransferase (GNAT) family RL_RS13000 PF04221 RelB antitoxin RL_RS13025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RL_RS13025 PF03129 Anticodon binding domain RL_RS13025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RL_RS13025 PF02824 TGS domain RL_RS13035 PF01809 Putative membrane protein insertion efficiency factor RL_RS13045 PF01227 GTP cyclohydrolase I RL_RS13050 PF01502 Phosphoribosyl-AMP cyclohydrolase RL_RS13055 PF01734 Patatin-like phospholipase RL_RS13080 PF00561 alpha/beta hydrolase fold RL_RS13095 PF07943 Penicillin-binding protein 5, C-terminal domain RL_RS13095 PF00768 D-alanyl-D-alanine carboxypeptidase RL_RS13110 PF03315 Serine dehydratase beta chain RL_RS13110 PF03313 Serine dehydratase alpha chain RL_RS13125 PF02502 Ribose/Galactose Isomerase RL_RS13140 PF00376 MerR family regulatory protein RL_RS13140 PF09278 MerR, DNA binding RL_RS13145 PF03448 MgtE intracellular N domain RL_RS13145 PF00571 CBS domain RL_RS13145 PF01769 Divalent cation transporter RL_RS13150 PF01327 Polypeptide deformylase RL_RS13165 PF03099 Biotin/lipoate A/B protein ligase family RL_RS13185 PF00364 Biotin-requiring enzyme RL_RS13185 PF00289 Biotin carboxylase, N-terminal domain RL_RS13185 PF02785 Biotin carboxylase C-terminal domain RL_RS13185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RL_RS13185 PF18140 Propionyl-coenzyme A carboxylase BT domain RL_RS13190 PF13673 Acetyltransferase (GNAT) domain RL_RS13195 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RL_RS13200 PF00893 Small Multidrug Resistance protein RL_RS13205 PF07681 DoxX RL_RS13210 PF01039 Carboxyl transferase domain RL_RS13225 PF13419 Haloacid dehalogenase-like hydrolase RL_RS13230 PF01479 S4 domain RL_RS13230 PF00849 RNA pseudouridylate synthase RL_RS13235 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RL_RS13255 PF08669 Glycine cleavage T-protein C-terminal barrel domain RL_RS13255 PF01571 Aminomethyltransferase folate-binding domain RL_RS13260 PF01597 Glycine cleavage H-protein RL_RS13265 PF02347 Glycine cleavage system P-protein RL_RS13270 PF01183 Glycosyl hydrolases family 25 RL_RS13275 PF07559 Flagellar basal body protein FlaE RL_RS13275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RL_RS13275 PF00460 Flagella basal body rod protein RL_RS13280 PF01521 Iron-sulphur cluster biosynthesis RL_RS13285 PF01883 Iron-sulfur cluster assembly protein RL_RS13290 PF00266 Aminotransferase class-V RL_RS13295 PF01458 Uncharacterized protein family (UPF0051) RL_RS13300 PF00005 ABC transporter RL_RS13310 PF01458 Uncharacterized protein family (UPF0051) RL_RS13315 PF00266 Aminotransferase class-V RL_RS13320 PF02129 X-Pro dipeptidyl-peptidase (S15 family) RL_RS13335 PF03702 Anhydro-N-acetylmuramic acid kinase RL_RS13340 PF00579 tRNA synthetases class I (W and Y) RL_RS13355 PF00578 AhpC/TSA family RL_RS13360 PF04305 Protein of unknown function (DUF455) RL_RS13365 PF01551 Peptidase family M23 RL_RS13365 PF01464 Transglycosylase SLT domain RL_RS13365 PF10145 Phage-related minor tail protein RL_RS13370 PF00270 DEAD/DEAH box helicase RL_RS13370 PF03880 DbpA RNA binding domain RL_RS13370 PF00271 Helicase conserved C-terminal domain RL_RS13370 PF12343 Cold shock protein DEAD box A RL_RS13385 PF01613 Flavin reductase like domain RL_RS13395 PF00834 Ribulose-phosphate 3 epimerase family RL_RS13410 PF10397 Adenylosuccinate lyase C-terminus RL_RS13410 PF00206 Lyase RL_RS13435 PF00990 Diguanylate cyclase, GGDEF domain RL_RS13435 PF00563 EAL domain RL_RS13435 PF03707 Bacterial signalling protein N terminal repeat RL_RS13440 PF01259 SAICAR synthetase RL_RS13445 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RL_RS13450 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family RL_RS13470 PF00155 Aminotransferase class I and II RL_RS13470 PF00392 Bacterial regulatory proteins, gntR family RL_RS13480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RL_RS13480 PF00586 AIR synthase related protein, N-terminal domain RL_RS13480 PF02769 AIR synthase related protein, C-terminal domain RL_RS13505 PF00462 Glutaredoxin RL_RS13510 PF07690 Major Facilitator Superfamily RL_RS13515 PF07690 Major Facilitator Superfamily RL_RS13530 PF00459 Inositol monophosphatase family RL_RS13535 PF00459 Inositol monophosphatase family RL_RS13540 PF01171 PP-loop family RL_RS13545 PF04960 Glutaminase RL_RS13550 PF01479 S4 domain RL_RS13550 PF00163 Ribosomal protein S4/S9 N-terminal domain RL_RS13560 PF07690 Major Facilitator Superfamily RL_RS13565 PF01177 Asp/Glu/Hydantoin racemase RL_RS13570 PF00588 SpoU rRNA Methylase family RL_RS13585 PF00180 Isocitrate/isopropylmalate dehydrogenase RL_RS13590 PF00583 Acetyltransferase (GNAT) family RL_RS13605 PF01810 LysE type translocator RL_RS13610 PF02272 DHHA1 domain RL_RS13610 PF01411 tRNA synthetases class II (A) RL_RS13610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RL_RS13615 PF00154 recA bacterial DNA recombination protein RL_RS13620 PF00294 pfkB family carbohydrate kinase RL_RS13625 PF04227 Indigoidine synthase A like protein RL_RS13630 PF00512 His Kinase A (phospho-acceptor) domain RL_RS13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS13630 PF00072 Response regulator receiver domain RL_RS13630 PF13188 PAS domain RL_RS13630 PF08448 PAS fold RL_RS13645 PF01258 Prokaryotic dksA/traR C4-type zinc finger RL_RS13655 PF04317 YcjX-like family, DUF463 RL_RS13660 PF05128 Domain of unknown function (DUF697) RL_RS13670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RL_RS13680 PF00809 Pterin binding enzyme RL_RS13690 PF00111 2Fe-2S iron-sulfur cluster binding domain RL_RS13710 PF07943 Penicillin-binding protein 5, C-terminal domain RL_RS13710 PF00768 D-alanyl-D-alanine carboxypeptidase RL_RS13715 PF17151 Periplasmic sensor domain RL_RS13715 PF00990 Diguanylate cyclase, GGDEF domain RL_RS13730 PF00005 ABC transporter RL_RS13735 PF02405 Permease MlaE RL_RS13740 PF13378 Enolase C-terminal domain-like RL_RS13740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS13745 PF12832 MFS_1 like family RL_RS13760 PF00873 AcrB/AcrD/AcrF family RL_RS13765 PF00529 HlyD membrane-fusion protein of T1SS RL_RS13765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS13770 PF00440 Bacterial regulatory proteins, tetR family RL_RS13775 PF08031 Berberine and berberine like RL_RS13775 PF01565 FAD binding domain RL_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS13780 PF03466 LysR substrate binding domain RL_RS13790 PF01515 Phosphate acetyl/butaryl transferase RL_RS13790 PF03949 Malic enzyme, NAD binding domain RL_RS13790 PF00390 Malic enzyme, N-terminal domain RL_RS13795 PF00075 RNase H RL_RS13810 PF00589 Phage integrase family RL_RS13810 PF02899 Phage integrase, N-terminal SAM-like domain RL_RS13815 PF00589 Phage integrase family RL_RS13835 PF14319 Transposase zinc-binding domain RL_RS13835 PF04986 Putative transposase RL_RS13840 PF13495 Phage integrase, N-terminal SAM-like domain RL_RS13840 PF00589 Phage integrase family RL_RS13845 PF00881 Nitroreductase family RL_RS13850 PF07690 Major Facilitator Superfamily RL_RS13855 PF00672 HAMP domain RL_RS13855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS13870 PF00793 DAHP synthetase I family RL_RS13875 PF07676 WD40-like Beta Propeller Repeat RL_RS13880 PF02540 NAD synthase RL_RS13880 PF00795 Carbon-nitrogen hydrolase RL_RS13900 PF00005 ABC transporter RL_RS13900 PF00664 ABC transporter transmembrane region RL_RS13905 PF01474 Class-II DAHP synthetase family RL_RS13915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RL_RS13915 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS13925 PF00708 Acylphosphatase RL_RS13935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RL_RS13940 PF13419 Haloacid dehalogenase-like hydrolase RL_RS13945 PF03734 L,D-transpeptidase catalytic domain RL_RS13950 PF00206 Lyase RL_RS13950 PF10415 Fumarase C C-terminus RL_RS13955 PF17803 Bacterial cadherin-like domain RL_RS13960 PF05681 Fumarate hydratase (Fumerase) RL_RS13960 PF05683 Fumarase C-terminus RL_RS13970 PF00990 Diguanylate cyclase, GGDEF domain RL_RS13970 PF17158 Membrane-associated sensor, integral membrane domain RL_RS13985 PF01047 MarR family RL_RS13990 PF06772 Bacterial low temperature requirement A protein (LtrA) RL_RS14000 PF06463 Molybdenum Cofactor Synthesis C RL_RS14000 PF04055 Radical SAM superfamily RL_RS14005 PF01209 ubiE/COQ5 methyltransferase family RL_RS14015 PF01032 FecCD transport family RL_RS14020 PF00005 ABC transporter RL_RS14025 PF04198 Putative sugar-binding domain RL_RS14030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RL_RS14030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RL_RS14035 PF02780 Transketolase, C-terminal domain RL_RS14035 PF02779 Transketolase, pyrimidine binding domain RL_RS14040 PF00456 Transketolase, thiamine diphosphate binding domain RL_RS14045 PF02653 Branched-chain amino acid transport system / permease component RL_RS14050 PF13407 Periplasmic binding protein domain RL_RS14055 PF00005 ABC transporter RL_RS14075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RL_RS14090 PF12804 MobA-like NTP transferase domain RL_RS14095 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RL_RS14100 PF08448 PAS fold RL_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS14100 PF00512 His Kinase A (phospho-acceptor) domain RL_RS14100 PF00072 Response regulator receiver domain RL_RS14100 PF13188 PAS domain RL_RS14105 PF06745 KaiC RL_RS14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14110 PF03466 LysR substrate binding domain RL_RS14120 PF00248 Aldo/keto reductase family RL_RS14125 PF13417 Glutathione S-transferase, N-terminal domain RL_RS14130 PF02566 OsmC-like protein RL_RS14135 PF00512 His Kinase A (phospho-acceptor) domain RL_RS14135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS14135 PF00672 HAMP domain RL_RS14135 PF16527 Two-component sensor protein CpxA, periplasmic domain RL_RS14140 PF00072 Response regulator receiver domain RL_RS14140 PF00486 Transcriptional regulatory protein, C terminal RL_RS14150 PF02683 Cytochrome C biogenesis protein transmembrane region RL_RS14150 PF00578 AhpC/TSA family RL_RS14150 PF17991 Thioredoxin like C-terminal domain RL_RS14155 PF12697 Alpha/beta hydrolase family RL_RS14160 PF08220 DeoR-like helix-turn-helix domain RL_RS14160 PF00455 DeoR C terminal sensor domain RL_RS14165 PF01791 DeoC/LacD family aldolase RL_RS14170 PF00171 Aldehyde dehydrogenase family RL_RS14180 PF00294 pfkB family carbohydrate kinase RL_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14190 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14200 PF00005 ABC transporter RL_RS14200 PF17912 MalK OB fold domain RL_RS14205 PF01389 OmpA-like transmembrane domain RL_RS14205 PF00691 OmpA family RL_RS14210 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS14215 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14220 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14225 PF06233 Usg-like family RL_RS14235 PF08241 Methyltransferase domain RL_RS14240 PF02798 Glutathione S-transferase, N-terminal domain RL_RS14280 PF00005 ABC transporter RL_RS14285 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14290 PF00296 Luciferase-like monooxygenase RL_RS14300 PF09084 NMT1/THI5 like RL_RS14310 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RL_RS14310 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RL_RS14320 PF03466 LysR substrate binding domain RL_RS14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14325 PF02530 Porin subfamily RL_RS14330 PF01037 Lrp/AsnC ligand binding domain RL_RS14335 PF03167 Uracil DNA glycosylase superfamily RL_RS14345 PF00989 PAS fold RL_RS14345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS14345 PF00512 His Kinase A (phospho-acceptor) domain RL_RS14350 PF01219 Prokaryotic diacylglycerol kinase RL_RS14355 PF02277 Phosphoribosyltransferase RL_RS14360 PF02654 Cobalamin-5-phosphate synthase RL_RS14380 PF03466 LysR substrate binding domain RL_RS14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14390 PF01061 ABC-2 type transporter RL_RS14395 PF00005 ABC transporter RL_RS14400 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain RL_RS14400 PF04616 Glycosyl hydrolases family 43 RL_RS14405 PF00248 Aldo/keto reductase family RL_RS14410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS14410 PF10518 TAT (twin-arginine translocation) pathway signal sequence RL_RS14425 PF03459 TOBE domain RL_RS14425 PF17912 MalK OB fold domain RL_RS14425 PF00005 ABC transporter RL_RS14430 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14440 PF01547 Bacterial extracellular solute-binding protein RL_RS14450 PF08264 Anticodon-binding domain of tRNA RL_RS14450 PF09334 tRNA synthetases class I (M) RL_RS14450 PF00133 tRNA synthetases class I (I, L, M and V) RL_RS14450 PF13603 Leucyl-tRNA synthetase, Domain 2 RL_RS14455 PF03466 LysR substrate binding domain RL_RS14455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14465 PF07478 D-ala D-ala ligase C-terminus RL_RS14465 PF01820 D-ala D-ala ligase N-terminus RL_RS14485 PF00583 Acetyltransferase (GNAT) family RL_RS14490 PF00795 Carbon-nitrogen hydrolase RL_RS14490 PF02540 NAD synthase RL_RS14495 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RL_RS14495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RL_RS14525 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS14525 PF00107 Zinc-binding dehydrogenase RL_RS14530 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS14530 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS14540 PF07977 FabA-like domain RL_RS14545 PF00550 Phosphopantetheine attachment site RL_RS14550 PF13545 Crp-like helix-turn-helix domain RL_RS14550 PF00027 Cyclic nucleotide-binding domain RL_RS14565 PF03186 CobD/Cbib protein RL_RS14570 PF00155 Aminotransferase class I and II RL_RS14575 PF07685 CobB/CobQ-like glutamine amidotransferase domain RL_RS14575 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RL_RS14580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RL_RS14585 PF01156 Inosine-uridine preferring nucleoside hydrolase RL_RS14590 PF01890 Cobalamin synthesis G C-terminus RL_RS14595 PF01925 Sulfite exporter TauE/SafE RL_RS14610 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP RL_RS14615 PF02514 CobN/Magnesium Chelatase RL_RS14620 PF07683 Cobalamin synthesis protein cobW C-terminal domain RL_RS14620 PF02492 CobW/HypB/UreG, nucleotide-binding domain RL_RS14625 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase RL_RS14635 PF00654 Voltage gated chloride channel RL_RS14640 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS14640 PF00672 HAMP domain RL_RS14650 PF07685 CobB/CobQ-like glutamine amidotransferase domain RL_RS14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14670 PF03466 LysR substrate binding domain RL_RS14680 PF00005 ABC transporter RL_RS14685 PF12399 Branched-chain amino acid ATP-binding cassette transporter RL_RS14685 PF00005 ABC transporter RL_RS14690 PF02653 Branched-chain amino acid transport system / permease component RL_RS14690 PF11862 Domain of unknown function (DUF3382) RL_RS14695 PF02653 Branched-chain amino acid transport system / permease component RL_RS14700 PF13458 Periplasmic binding protein RL_RS14705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RL_RS14705 PF01488 Shikimate / quinate 5-dehydrogenase RL_RS14705 PF08501 Shikimate dehydrogenase substrate binding domain RL_RS14710 PF01261 Xylose isomerase-like TIM barrel RL_RS14710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS14715 PF08501 Shikimate dehydrogenase substrate binding domain RL_RS14715 PF01488 Shikimate / quinate 5-dehydrogenase RL_RS14715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RL_RS14725 PF04909 Amidohydrolase RL_RS14730 PF04303 PrpF protein RL_RS14735 PF03737 Aldolase/RraA RL_RS14740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS14745 PF02585 GlcNAc-PI de-N-acetylase RL_RS14755 PF03466 LysR substrate binding domain RL_RS14755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14760 PF01810 LysE type translocator RL_RS14765 PF03466 LysR substrate binding domain RL_RS14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS14775 PF01272 Transcription elongation factor, GreA/GreB, C-term RL_RS14775 PF03449 Transcription elongation factor, N-terminal RL_RS14815 PF01740 STAS domain RL_RS14815 PF00916 Sulfate permease family RL_RS14820 PF03976 Polyphosphate kinase 2 (PPK2) RL_RS14845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS14845 PF00529 HlyD membrane-fusion protein of T1SS RL_RS14865 PF00924 Mechanosensitive ion channel RL_RS14885 PF01965 DJ-1/PfpI family RL_RS14885 PF12833 Helix-turn-helix domain RL_RS14890 PF00990 Diguanylate cyclase, GGDEF domain RL_RS14890 PF00072 Response regulator receiver domain RL_RS14895 PF00072 Response regulator receiver domain RL_RS14930 PF00230 Major intrinsic protein RL_RS14935 PF03960 ArsC family RL_RS14940 PF03358 NADPH-dependent FMN reductase RL_RS14955 PF12795 Mechanosensitive ion channel porin domain RL_RS14955 PF00924 Mechanosensitive ion channel RL_RS14955 PF12794 Mechanosensitive ion channel inner membrane domain 1 RL_RS14965 PF00072 Response regulator receiver domain RL_RS14965 PF00486 Transcriptional regulatory protein, C terminal RL_RS14970 PF07690 Major Facilitator Superfamily RL_RS14980 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14985 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS14995 PF00005 ABC transporter RL_RS14995 PF17912 MalK OB fold domain RL_RS15000 PF00005 ABC transporter RL_RS15000 PF08402 TOBE domain RL_RS15005 PF02733 Dak1 domain RL_RS15005 PF02734 DAK2 domain RL_RS15010 PF02734 DAK2 domain RL_RS15015 PF03610 PTS system fructose IIA component RL_RS15015 PF05524 PEP-utilising enzyme, N-terminal RL_RS15015 PF00391 PEP-utilising enzyme, mobile domain RL_RS15015 PF00381 PTS HPr component phosphorylation site RL_RS15025 PF05524 PEP-utilising enzyme, N-terminal RL_RS15025 PF00391 PEP-utilising enzyme, mobile domain RL_RS15025 PF02896 PEP-utilising enzyme, TIM barrel domain RL_RS15035 PF02733 Dak1 domain RL_RS15050 PF02525 Flavodoxin-like fold RL_RS15060 PF06441 Epoxide hydrolase N terminus RL_RS15070 PF07729 FCD domain RL_RS15070 PF00392 Bacterial regulatory proteins, gntR family RL_RS15090 PF01266 FAD dependent oxidoreductase RL_RS15095 PF07722 Peptidase C26 RL_RS15100 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS15110 PF00005 ABC transporter RL_RS15115 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS15120 PF01965 DJ-1/PfpI family RL_RS15120 PF12833 Helix-turn-helix domain RL_RS15125 PF01047 MarR family RL_RS15130 PF00293 NUDIX domain RL_RS15140 PF02566 OsmC-like protein RL_RS15145 PF01209 ubiE/COQ5 methyltransferase family RL_RS15160 PF08269 Cache domain RL_RS15160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS15165 PF03061 Thioesterase superfamily RL_RS15195 PF07690 Major Facilitator Superfamily RL_RS15200 PF08241 Methyltransferase domain RL_RS15205 PF12833 Helix-turn-helix domain RL_RS15205 PF12852 Cupin RL_RS15210 PF00106 short chain dehydrogenase RL_RS15215 PF05368 NmrA-like family RL_RS15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS15220 PF03466 LysR substrate binding domain RL_RS15225 PF01740 STAS domain RL_RS15225 PF00916 Sulfate permease family RL_RS15260 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS15270 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS15285 PF00723 Glycosyl hydrolases family 15 RL_RS15290 PF17757 UvrB interaction domain RL_RS15290 PF04851 Type III restriction enzyme, res subunit RL_RS15290 PF00271 Helicase conserved C-terminal domain RL_RS15290 PF02151 UvrB/uvrC motif RL_RS15290 PF12344 Ultra-violet resistance protein B RL_RS15305 PF00583 Acetyltransferase (GNAT) family RL_RS15305 PF13508 Acetyltransferase (GNAT) domain RL_RS15325 PF00313 'Cold-shock' DNA-binding domain RL_RS15330 PF01207 Dihydrouridine synthase (Dus) RL_RS15335 PF13180 PDZ domain RL_RS15340 PF00561 alpha/beta hydrolase fold RL_RS15355 PF07886 BA14K-like protein RL_RS15365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS15365 PF00672 HAMP domain RL_RS15365 PF00512 His Kinase A (phospho-acceptor) domain RL_RS15370 PF00072 Response regulator receiver domain RL_RS15370 PF00486 Transcriptional regulatory protein, C terminal RL_RS15375 PF03358 NADPH-dependent FMN reductase RL_RS15380 PF00005 ABC transporter RL_RS15395 PF01638 HxlR-like helix-turn-helix RL_RS15405 PF00440 Bacterial regulatory proteins, tetR family RL_RS15415 PF00440 Bacterial regulatory proteins, tetR family RL_RS15420 PF00248 Aldo/keto reductase family RL_RS15435 PF01037 Lrp/AsnC ligand binding domain RL_RS15440 PF00764 Arginosuccinate synthase RL_RS15450 PF01040 UbiA prenyltransferase family RL_RS15465 PF00043 Glutathione S-transferase, C-terminal domain RL_RS15465 PF02798 Glutathione S-transferase, N-terminal domain RL_RS15470 PF00005 ABC transporter RL_RS15470 PF00664 ABC transporter transmembrane region RL_RS15485 PF00300 Histidine phosphatase superfamily (branch 1) RL_RS15510 PF01113 Dihydrodipicolinate reductase, N-terminus RL_RS15510 PF05173 Dihydrodipicolinate reductase, C-terminus RL_RS15515 PF02423 Ornithine cyclodeaminase/mu-crystallin family RL_RS15520 PF00583 Acetyltransferase (GNAT) family RL_RS15555 PF07690 Major Facilitator Superfamily RL_RS15565 PF00579 tRNA synthetases class I (W and Y) RL_RS15570 PF02705 K+ potassium transporter RL_RS15575 PF00999 Sodium/hydrogen exchanger family RL_RS15585 PF00174 Oxidoreductase molybdopterin binding domain RL_RS15590 PF01292 Prokaryotic cytochrome b561 RL_RS15600 PF04545 Sigma-70, region 4 RL_RS15600 PF04542 Sigma-70 region 2 RL_RS15615 PF17803 Bacterial cadherin-like domain RL_RS15630 PF00892 EamA-like transporter family RL_RS15645 PF00005 ABC transporter RL_RS15650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS15655 PF12833 Helix-turn-helix domain RL_RS15655 PF02311 AraC-like ligand binding domain RL_RS15675 PF01494 FAD binding domain RL_RS15680 PF02728 Copper amine oxidase, N3 domain RL_RS15680 PF02727 Copper amine oxidase, N2 domain RL_RS15680 PF01179 Copper amine oxidase, enzyme domain RL_RS15685 PF00324 Amino acid permease RL_RS15705 PF00510 Cytochrome c oxidase subunit III RL_RS15710 PF00510 Cytochrome c oxidase subunit III RL_RS15715 PF00115 Cytochrome C and Quinol oxidase polypeptide I RL_RS15720 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RL_RS15725 PF00034 Cytochrome c RL_RS15730 PF01810 LysE type translocator RL_RS15745 PF00005 ABC transporter RL_RS15750 PF01032 FecCD transport family RL_RS15765 PF01850 PIN domain RL_RS15770 PF04273 Putative phosphatase (DUF442) RL_RS15770 PF00753 Metallo-beta-lactamase superfamily RL_RS15780 PF06719 AraC-type transcriptional regulator N-terminus RL_RS15780 PF12833 Helix-turn-helix domain RL_RS15810 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS15815 PF05496 Holliday junction DNA helicase RuvB P-loop domain RL_RS15815 PF05491 RuvB C-terminal winged helix domain RL_RS15815 PF17864 RuvB AAA lid domain RL_RS15820 PF00248 Aldo/keto reductase family RL_RS15835 PF00486 Transcriptional regulatory protein, C terminal RL_RS15835 PF00072 Response regulator receiver domain RL_RS15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS15855 PF12327 FtsZ family, C-terminal domain RL_RS15855 PF00091 Tubulin/FtsZ family, GTPase domain RL_RS15875 PF16363 GDP-mannose 4,6 dehydratase RL_RS15915 PF00440 Bacterial regulatory proteins, tetR family RL_RS15915 PF08362 YcdC-like protein, C-terminal region RL_RS15925 PF06339 Ectoine synthase RL_RS15930 PF03466 LysR substrate binding domain RL_RS15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS15935 PF03707 Bacterial signalling protein N terminal repeat RL_RS15935 PF00563 EAL domain RL_RS15935 PF13188 PAS domain RL_RS15935 PF00990 Diguanylate cyclase, GGDEF domain RL_RS15945 PF01209 ubiE/COQ5 methyltransferase family RL_RS15950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS15950 PF00672 HAMP domain RL_RS15950 PF02743 Cache domain RL_RS15970 PF02423 Ornithine cyclodeaminase/mu-crystallin family RL_RS16010 PF10996 Beta-Casp domain RL_RS16010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RL_RS16010 PF00753 Metallo-beta-lactamase superfamily RL_RS16015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS16015 PF03466 LysR substrate binding domain RL_RS16020 PF08533 Beta-galactosidase C-terminal domain RL_RS16020 PF02449 Beta-galactosidase RL_RS16020 PF08532 Beta-galactosidase trimerisation domain RL_RS16025 PF17912 MalK OB fold domain RL_RS16025 PF00005 ABC transporter RL_RS16030 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS16045 PF00480 ROK family RL_RS16070 PF00892 EamA-like transporter family RL_RS16075 PF00392 Bacterial regulatory proteins, gntR family RL_RS16075 PF00155 Aminotransferase class I and II RL_RS16085 PF02954 Bacterial regulatory protein, Fis family RL_RS16085 PF00072 Response regulator receiver domain RL_RS16085 PF00158 Sigma-54 interaction domain RL_RS16090 PF00989 PAS fold RL_RS16090 PF00512 His Kinase A (phospho-acceptor) domain RL_RS16090 PF18698 Histidine kinase sensor domain RL_RS16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS16090 PF00672 HAMP domain RL_RS16095 PF00583 Acetyltransferase (GNAT) family RL_RS16095 PF00814 Glycoprotease family RL_RS16100 PF00043 Glutathione S-transferase, C-terminal domain RL_RS16100 PF02798 Glutathione S-transferase, N-terminal domain RL_RS16105 PF00561 alpha/beta hydrolase fold RL_RS16135 PF00149 Calcineurin-like phosphoesterase RL_RS16140 PF00459 Inositol monophosphatase family RL_RS16150 PF17912 MalK OB fold domain RL_RS16150 PF00005 ABC transporter RL_RS16155 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS16160 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS16165 PF13416 Bacterial extracellular solute-binding protein RL_RS16180 PF14528 LAGLIDADG-like domain RL_RS16180 PF03796 DnaB-like helicase C terminal domain RL_RS16180 PF00772 DnaB-like helicase N terminal domain RL_RS16190 PF08241 Methyltransferase domain RL_RS16195 PF00296 Luciferase-like monooxygenase RL_RS16205 PF01594 AI-2E family transporter RL_RS16220 PF03466 LysR substrate binding domain RL_RS16220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS16250 PF00885 6,7-dimethyl-8-ribityllumazine synthase RL_RS16280 PF03466 LysR substrate binding domain RL_RS16280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS16285 PF00144 Beta-lactamase RL_RS16295 PF03466 LysR substrate binding domain RL_RS16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS16320 PF00072 Response regulator receiver domain RL_RS16320 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS16335 PF01557 Fumarylacetoacetate (FAA) hydrolase family RL_RS16340 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS16370 PF00950 ABC 3 transport family RL_RS16375 PF00005 ABC transporter RL_RS16380 PF01297 Zinc-uptake complex component A periplasmic RL_RS16385 PF07683 Cobalamin synthesis protein cobW C-terminal domain RL_RS16385 PF02492 CobW/HypB/UreG, nucleotide-binding domain RL_RS16405 PF03471 Transporter associated domain RL_RS16405 PF01595 Cyclin M transmembrane N-terminal domain RL_RS16405 PF00571 CBS domain RL_RS16410 PF02417 Chromate transporter RL_RS16415 PF09828 Chromate resistance exported protein RL_RS16440 PF02567 Phenazine biosynthesis-like protein RL_RS16455 PF00005 ABC transporter RL_RS16460 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS16475 PF01047 MarR family RL_RS16480 PF00248 Aldo/keto reductase family RL_RS16485 PF10042 Uncharacterized conserved protein (DUF2278) RL_RS16490 PF00155 Aminotransferase class I and II RL_RS16495 PF01063 Amino-transferase class IV RL_RS16515 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RL_RS16515 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RL_RS16540 PF00535 Glycosyl transferase family 2 RL_RS16545 PF12833 Helix-turn-helix domain RL_RS16545 PF06719 AraC-type transcriptional regulator N-terminus RL_RS16550 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS16550 PF00107 Zinc-binding dehydrogenase RL_RS16555 PF00679 Elongation factor G C-terminus RL_RS16555 PF03764 Elongation factor G, domain IV RL_RS16555 PF00009 Elongation factor Tu GTP binding domain RL_RS16560 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS16565 PF01037 Lrp/AsnC ligand binding domain RL_RS16570 PF01177 Asp/Glu/Hydantoin racemase RL_RS16575 PF00583 Acetyltransferase (GNAT) family RL_RS16575 PF01047 MarR family RL_RS16580 PF00440 Bacterial regulatory proteins, tetR family RL_RS16585 PF07690 Major Facilitator Superfamily RL_RS16590 PF01638 HxlR-like helix-turn-helix RL_RS16600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RL_RS16605 PF13411 MerR HTH family regulatory protein RL_RS16610 PF14490 Helix-hairpin-helix containing domain RL_RS16610 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RL_RS16610 PF13538 UvrD-like helicase C-terminal domain RL_RS16615 PF03466 LysR substrate binding domain RL_RS16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS16635 PF00924 Mechanosensitive ion channel RL_RS16645 PF01047 MarR family RL_RS16665 PF08281 Sigma-70, region 4 RL_RS16665 PF04542 Sigma-70 region 2 RL_RS16680 PF02211 Nitrile hydratase beta subunit RL_RS16685 PF02979 Nitrile hydratase, alpha chain RL_RS16700 PF01810 LysE type translocator RL_RS16705 PF00248 Aldo/keto reductase family RL_RS16710 PF10369 Small subunit of acetolactate synthase RL_RS16715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RL_RS16715 PF00205 Thiamine pyrophosphate enzyme, central domain RL_RS16715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RL_RS16725 PF00701 Dihydrodipicolinate synthetase family RL_RS16735 PF00392 Bacterial regulatory proteins, gntR family RL_RS16735 PF00155 Aminotransferase class I and II RL_RS16760 PF13180 PDZ domain RL_RS16765 PF01145 SPFH domain / Band 7 family RL_RS16770 PF01145 SPFH domain / Band 7 family RL_RS16770 PF12221 Bacterial membrane protein N terminal RL_RS16775 PF00186 Dihydrofolate reductase RL_RS16780 PF00303 Thymidylate synthase RL_RS16805 PF01565 FAD binding domain RL_RS16805 PF02913 FAD linked oxidases, C-terminal domain RL_RS16810 PF00248 Aldo/keto reductase family RL_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS16815 PF03466 LysR substrate binding domain RL_RS16820 PF05145 Transition state regulatory protein AbrB RL_RS16835 PF13488 Glycine zipper RL_RS16835 PF00691 OmpA family RL_RS16840 PF00669 Bacterial flagellin N-terminal helical region RL_RS16840 PF00700 Bacterial flagellin C-terminal helical region RL_RS16845 PF00873 AcrB/AcrD/AcrF family RL_RS16850 PF13533 Biotin-lipoyl like RL_RS16855 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS16860 PF04293 SpoVR like protein RL_RS16865 PF04285 Protein of unknown function (DUF444) RL_RS16870 PF06798 PrkA serine protein kinase C-terminal domain RL_RS16870 PF08298 PrkA AAA domain RL_RS16880 PF00580 UvrD/REP helicase N-terminal domain RL_RS16880 PF13361 UvrD-like helicase C-terminal domain RL_RS16895 PF00857 Isochorismatase family RL_RS16925 PF01321 Creatinase/Prolidase N-terminal domain RL_RS16925 PF00557 Metallopeptidase family M24 RL_RS16935 PF02630 SCO1/SenC RL_RS16940 PF01584 CheW-like domain RL_RS16960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RL_RS16960 PF03120 NAD-dependent DNA ligase OB-fold domain RL_RS16960 PF01653 NAD-dependent DNA ligase adenylation domain RL_RS16960 PF12826 Helix-hairpin-helix motif RL_RS16960 PF00533 BRCA1 C Terminus (BRCT) domain RL_RS16970 PF02463 RecF/RecN/SMC N terminal domain RL_RS16975 PF13525 Outer membrane lipoprotein RL_RS16980 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RL_RS16985 PF12327 FtsZ family, C-terminal domain RL_RS16985 PF00091 Tubulin/FtsZ family, GTPase domain RL_RS16990 PF02491 SHS2 domain inserted in FTSA RL_RS16995 PF03799 Cell division protein FtsQ RL_RS16995 PF08478 POTRA domain, FtsQ-type RL_RS17000 PF01820 D-ala D-ala ligase N-terminus RL_RS17000 PF07478 D-ala D-ala ligase C-terminus RL_RS17005 PF00230 Major intrinsic protein RL_RS17010 PF07690 Major Facilitator Superfamily RL_RS17010 PF00083 Sugar (and other) transporter RL_RS17015 PF01370 NAD dependent epimerase/dehydratase family RL_RS17020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RL_RS17020 PF01565 FAD binding domain RL_RS17025 PF02875 Mur ligase family, glutamate ligase domain RL_RS17025 PF08245 Mur ligase middle domain RL_RS17025 PF01225 Mur ligase family, catalytic domain RL_RS17030 PF04101 Glycosyltransferase family 28 C-terminal domain RL_RS17030 PF03033 Glycosyltransferase family 28 N-terminal domain RL_RS17035 PF01098 Cell cycle protein RL_RS17040 PF08245 Mur ligase middle domain RL_RS17045 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RL_RS17045 PF00953 Glycosyl transferase family 4 RL_RS17050 PF08245 Mur ligase middle domain RL_RS17050 PF01225 Mur ligase family, catalytic domain RL_RS17050 PF02875 Mur ligase family, glutamate ligase domain RL_RS17055 PF01225 Mur ligase family, catalytic domain RL_RS17055 PF02875 Mur ligase family, glutamate ligase domain RL_RS17055 PF08245 Mur ligase middle domain RL_RS17060 PF00905 Penicillin binding protein transpeptidase domain RL_RS17060 PF03717 Penicillin-binding Protein dimerisation domain RL_RS17070 PF01795 MraW methylase family RL_RS17075 PF02381 MraZ protein, putative antitoxin-like RL_RS17095 PF01510 N-acetylmuramoyl-L-alanine amidase RL_RS17100 PF05099 Tellurite resistance protein TerB RL_RS17100 PF00226 DnaJ domain RL_RS17105 PF00365 Phosphofructokinase RL_RS17110 PF01810 LysE type translocator RL_RS17135 PF01183 Glycosyl hydrolases family 25 RL_RS17150 PF02219 Methylenetetrahydrofolate reductase RL_RS17155 PF03551 Transcriptional regulator PadR-like family RL_RS17155 PF13847 Methyltransferase domain RL_RS17160 PF12848 ABC transporter RL_RS17160 PF00005 ABC transporter RL_RS17170 PF00561 alpha/beta hydrolase fold RL_RS17175 PF00892 EamA-like transporter family RL_RS17180 PF02515 CoA-transferase family III RL_RS17185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RL_RS17185 PF00205 Thiamine pyrophosphate enzyme, central domain RL_RS17185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RL_RS17190 PF01042 Endoribonuclease L-PSP RL_RS17205 PF01476 LysM domain RL_RS17205 PF03734 L,D-transpeptidase catalytic domain RL_RS17210 PF13614 AAA domain RL_RS17215 PF00465 Iron-containing alcohol dehydrogenase RL_RS17220 PF00171 Aldehyde dehydrogenase family RL_RS17225 PF00120 Glutamine synthetase, catalytic domain RL_RS17225 PF03951 Glutamine synthetase, beta-Grasp domain RL_RS17240 PF01418 Helix-turn-helix domain, rpiR family RL_RS17240 PF01380 SIS domain RL_RS17255 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS17260 PF08402 TOBE domain RL_RS17260 PF00005 ABC transporter RL_RS17270 PF08402 TOBE domain RL_RS17270 PF00005 ABC transporter RL_RS17275 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS17275 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS17280 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS17285 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS17295 PF01869 BadF/BadG/BcrA/BcrD ATPase family RL_RS17300 PF07702 UTRA domain RL_RS17300 PF00392 Bacterial regulatory proteins, gntR family RL_RS17305 PF02574 Homocysteine S-methyltransferase RL_RS17305 PF00809 Pterin binding enzyme RL_RS17305 PF02965 Vitamin B12 dependent methionine synthase, activation domain RL_RS17305 PF02607 B12 binding domain RL_RS17305 PF02310 B12 binding domain RL_RS17320 PF03928 Haem-degrading RL_RS17325 PF01613 Flavin reductase like domain RL_RS17330 PF01177 Asp/Glu/Hydantoin racemase RL_RS17335 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS17340 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS17350 PF00005 ABC transporter RL_RS17350 PF08402 TOBE domain RL_RS17395 PF00765 Autoinducer synthase RL_RS17435 PF04402 Protein of unknown function (DUF541) RL_RS17450 PF01894 Uncharacterised protein family UPF0047 RL_RS17455 PF07237 Protein of unknown function (DUF1428) RL_RS17505 PF12833 Helix-turn-helix domain RL_RS17505 PF02311 AraC-like ligand binding domain RL_RS17510 PF01636 Phosphotransferase enzyme family RL_RS17530 PF04546 Sigma-70, non-essential region RL_RS17530 PF04545 Sigma-70, region 4 RL_RS17530 PF04539 Sigma-70 region 3 RL_RS17530 PF03979 Sigma-70 factor, region 1.1 RL_RS17530 PF04542 Sigma-70 region 2 RL_RS17530 PF00140 Sigma-70 factor, region 1.2 RL_RS17540 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS17540 PF00107 Zinc-binding dehydrogenase RL_RS17545 PF00155 Aminotransferase class I and II RL_RS17550 PF08241 Methyltransferase domain RL_RS17555 PF00570 HRDC domain RL_RS17555 PF16124 RecQ zinc-binding RL_RS17555 PF00271 Helicase conserved C-terminal domain RL_RS17555 PF09382 RQC domain RL_RS17555 PF00270 DEAD/DEAH box helicase RL_RS17560 PF01807 CHC2 zinc finger RL_RS17560 PF08275 DNA primase catalytic core, N-terminal domain RL_RS17560 PF10410 DnaB-helicase binding domain of primase RL_RS17560 PF08278 DNA primase DnaG DnaB-binding RL_RS17575 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RL_RS17575 PF00117 Glutamine amidotransferase class-I RL_RS17585 PF01554 MatE RL_RS17590 PF07690 Major Facilitator Superfamily RL_RS17595 PF00248 Aldo/keto reductase family RL_RS17600 PF04228 Putative neutral zinc metallopeptidase RL_RS17615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RL_RS17615 PF02142 MGS-like domain RL_RS17615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RL_RS17630 PF03449 Transcription elongation factor, N-terminal RL_RS17630 PF01272 Transcription elongation factor, GreA/GreB, C-term RL_RS17635 PF00534 Glycosyl transferases group 1 RL_RS17640 PF00375 Sodium:dicarboxylate symporter family RL_RS17645 PF02743 Cache domain RL_RS17645 PF00512 His Kinase A (phospho-acceptor) domain RL_RS17645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS17650 PF02954 Bacterial regulatory protein, Fis family RL_RS17650 PF00072 Response regulator receiver domain RL_RS17650 PF00158 Sigma-54 interaction domain RL_RS17655 PF01037 Lrp/AsnC ligand binding domain RL_RS17660 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS17665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS17665 PF03466 LysR substrate binding domain RL_RS17675 PF07690 Major Facilitator Superfamily RL_RS17680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RL_RS17685 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase RL_RS17695 PF03466 LysR substrate binding domain RL_RS17695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS17700 PF13673 Acetyltransferase (GNAT) domain RL_RS17700 PF04229 GrpB protein RL_RS17710 PF01699 Sodium/calcium exchanger protein RL_RS17720 PF01501 Glycosyl transferase family 8 RL_RS17720 PF08437 Glycosyl transferase family 8 C-terminal RL_RS17735 PF00155 Aminotransferase class I and II RL_RS17750 PF07995 Glucose / Sorbosone dehydrogenase RL_RS17765 PF00313 'Cold-shock' DNA-binding domain RL_RS17780 PF01638 HxlR-like helix-turn-helix RL_RS17785 PF00672 HAMP domain RL_RS17785 PF00512 His Kinase A (phospho-acceptor) domain RL_RS17785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS17790 PF00072 Response regulator receiver domain RL_RS17790 PF00486 Transcriptional regulatory protein, C terminal RL_RS17795 PF12802 MarR family RL_RS17810 PF00753 Metallo-beta-lactamase superfamily RL_RS17815 PF01588 Putative tRNA binding domain RL_RS17820 PF03807 NADP oxidoreductase coenzyme F420-dependent RL_RS17820 PF14748 Pyrroline-5-carboxylate reductase dimerisation RL_RS17835 PF01790 Prolipoprotein diacylglyceryl transferase RL_RS17845 PF02578 Multi-copper polyphenol oxidoreductase laccase RL_RS17860 PF14572 Phosphoribosyl synthetase-associated domain RL_RS17860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RL_RS17870 PF13188 PAS domain RL_RS17870 PF03707 Bacterial signalling protein N terminal repeat RL_RS17870 PF00990 Diguanylate cyclase, GGDEF domain RL_RS17870 PF00563 EAL domain RL_RS17875 PF14693 Ribosomal protein TL5, C-terminal domain RL_RS17875 PF01386 Ribosomal L25p family RL_RS17880 PF00563 EAL domain RL_RS17880 PF00990 Diguanylate cyclase, GGDEF domain RL_RS17880 PF13188 PAS domain RL_RS17880 PF03707 Bacterial signalling protein N terminal repeat RL_RS17890 PF01195 Peptidyl-tRNA hydrolase RL_RS17900 PF02617 ATP-dependent Clp protease adaptor protein ClpS RL_RS17915 PF06071 Protein of unknown function (DUF933) RL_RS17915 PF01926 50S ribosome-binding GTPase RL_RS17935 PF00156 Phosphoribosyl transferase domain RL_RS17940 PF00033 Cytochrome b/b6/petB RL_RS17940 PF00032 Cytochrome b(C-terminal)/b6/petD RL_RS17940 PF02167 Cytochrome C1 family RL_RS17945 PF00033 Cytochrome b/b6/petB RL_RS17945 PF00032 Cytochrome b(C-terminal)/b6/petD RL_RS17950 PF00355 Rieske [2Fe-2S] domain RL_RS17950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RL_RS17960 PF00005 ABC transporter RL_RS17960 PF00664 ABC transporter transmembrane region RL_RS17970 PF00005 ABC transporter RL_RS17970 PF00664 ABC transporter transmembrane region RL_RS17975 PF00588 SpoU rRNA Methylase family RL_RS17980 PF02690 Na+/Pi-cotransporter RL_RS17990 PF01218 Coproporphyrinogen III oxidase RL_RS18005 PF12627 Probable RNA and SrmB- binding site of polymerase A RL_RS18005 PF13735 tRNA nucleotidyltransferase domain 2 putative RL_RS18005 PF01743 Poly A polymerase head domain RL_RS18010 PF00293 NUDIX domain RL_RS18020 PF17863 AAA lid domain RL_RS18020 PF07726 ATPase family associated with various cellular activities (AAA) RL_RS18040 PF00583 Acetyltransferase (GNAT) family RL_RS18050 PF13409 Glutathione S-transferase, N-terminal domain RL_RS18055 PF00293 NUDIX domain RL_RS18055 PF13344 Haloacid dehalogenase-like hydrolase RL_RS18080 PF00107 Zinc-binding dehydrogenase RL_RS18080 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS18085 PF01638 HxlR-like helix-turn-helix RL_RS18090 PF00682 HMGL-like RL_RS18090 PF08502 LeuA allosteric (dimerisation) domain RL_RS18095 PF03594 Benzoate membrane transport protein RL_RS18100 PF00574 Clp protease RL_RS18105 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) RL_RS18110 PF14489 QueF-like protein RL_RS18115 PF16916 Dimerisation domain of Zinc Transporter RL_RS18115 PF01545 Cation efflux family RL_RS18130 PF00117 Glutamine amidotransferase class-I RL_RS18130 PF04715 Anthranilate synthase component I, N terminal region RL_RS18130 PF00425 chorismate binding enzyme RL_RS18135 PF00593 TonB dependent receptor RL_RS18135 PF07715 TonB-dependent Receptor Plug Domain RL_RS18135 PF04886 PT repeat RL_RS18150 PF01268 Formate--tetrahydrofolate ligase RL_RS18155 PF03350 Uncharacterized protein family, UPF0114 RL_RS18165 PF03472 Autoinducer binding domain RL_RS18165 PF00196 Bacterial regulatory proteins, luxR family RL_RS18185 PF00265 Thymidine kinase RL_RS18190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RL_RS18195 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS18200 PF00571 CBS domain RL_RS18200 PF00005 ABC transporter RL_RS18210 PF01022 Bacterial regulatory protein, arsR family RL_RS18215 PF00202 Aminotransferase class-III RL_RS18220 PF01966 HD domain RL_RS18220 PF11871 Domain of unknown function (DUF3391) RL_RS18225 PF13458 Periplasmic binding protein RL_RS18230 PF13382 Adenine deaminase C-terminal domain RL_RS18230 PF01979 Amidohydrolase family RL_RS18240 PF00128 Alpha amylase, catalytic domain RL_RS18245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS18250 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS18255 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS18255 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS18260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS18260 PF00005 ABC transporter RL_RS18265 PF00005 ABC transporter RL_RS18265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS18270 PF00294 pfkB family carbohydrate kinase RL_RS18275 PF10931 Protein of unknown function (DUF2735) RL_RS18280 PF03951 Glutamine synthetase, beta-Grasp domain RL_RS18280 PF00120 Glutamine synthetase, catalytic domain RL_RS18290 PF07859 alpha/beta hydrolase fold RL_RS18295 PF01047 MarR family RL_RS18300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RL_RS18300 PF01926 50S ribosome-binding GTPase RL_RS18320 PF05992 SbmA/BacA-like family RL_RS18330 PF03551 Transcriptional regulator PadR-like family RL_RS18335 PF00557 Metallopeptidase family M24 RL_RS18350 PF04542 Sigma-70 region 2 RL_RS18350 PF08281 Sigma-70, region 4 RL_RS18355 PF03795 YCII-related domain RL_RS18365 PF12833 Helix-turn-helix domain RL_RS18365 PF01965 DJ-1/PfpI family RL_RS18375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RL_RS18375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RL_RS18385 PF00941 FAD binding domain in molybdopterin dehydrogenase RL_RS18385 PF03450 CO dehydrogenase flavoprotein C-terminal domain RL_RS18390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase RL_RS18390 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RL_RS18405 PF03466 LysR substrate binding domain RL_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS18430 PF01979 Amidohydrolase family RL_RS18435 PF01070 FMN-dependent dehydrogenase RL_RS18450 PF01145 SPFH domain / Band 7 family RL_RS18450 PF15975 Flotillin RL_RS18460 PF00576 HIUase/Transthyretin family RL_RS18465 PF04115 Ureidoglycolate lyase RL_RS18475 PF09349 OHCU decarboxylase RL_RS18475 PF01014 Uricase RL_RS18490 PF01266 FAD dependent oxidoreductase RL_RS18495 PF01266 FAD dependent oxidoreductase RL_RS18495 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RL_RS18500 PF01627 Hpt domain RL_RS18500 PF00512 His Kinase A (phospho-acceptor) domain RL_RS18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS18500 PF00072 Response regulator receiver domain RL_RS18500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RL_RS18500 PF00672 HAMP domain RL_RS18510 PF07690 Major Facilitator Superfamily RL_RS18515 PF00701 Dihydrodipicolinate synthetase family RL_RS18520 PF00356 Bacterial regulatory proteins, lacI family RL_RS18525 PF08713 DNA alkylation repair enzyme RL_RS18530 PF00270 DEAD/DEAH box helicase RL_RS18530 PF00271 Helicase conserved C-terminal domain RL_RS18535 PF00512 His Kinase A (phospho-acceptor) domain RL_RS18535 PF00672 HAMP domain RL_RS18535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS18540 PF00486 Transcriptional regulatory protein, C terminal RL_RS18540 PF00072 Response regulator receiver domain RL_RS18550 PF04116 Fatty acid hydroxylase superfamily RL_RS18570 PF00005 ABC transporter RL_RS18590 PF14403 Circularly permuted ATP-grasp type 2 RL_RS18595 PF14403 Circularly permuted ATP-grasp type 2 RL_RS18595 PF04168 A predicted alpha-helical domain with a conserved ER motif. RL_RS18605 PF00072 Response regulator receiver domain RL_RS18610 PF00920 Dehydratase family RL_RS18615 PF00171 Aldehyde dehydrogenase family RL_RS18625 PF02653 Branched-chain amino acid transport system / permease component RL_RS18630 PF00005 ABC transporter RL_RS18635 PF13407 Periplasmic binding protein domain RL_RS18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS18640 PF03466 LysR substrate binding domain RL_RS18660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS18660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS18670 PF13407 Periplasmic binding protein domain RL_RS18675 PF02653 Branched-chain amino acid transport system / permease component RL_RS18680 PF00005 ABC transporter RL_RS18695 PF05951 Bacterial protein of unknown function (DUF882) RL_RS18700 PF01370 NAD dependent epimerase/dehydratase family RL_RS18710 PF00535 Glycosyl transferase family 2 RL_RS18715 PF00535 Glycosyl transferase family 2 RL_RS18720 PF00005 ABC transporter RL_RS18720 PF00664 ABC transporter transmembrane region RL_RS18725 PF01501 Glycosyl transferase family 8 RL_RS18725 PF00535 Glycosyl transferase family 2 RL_RS18745 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding RL_RS18760 PF01381 Helix-turn-helix RL_RS18775 PF00331 Glycosyl hydrolase family 10 RL_RS18780 PF00534 Glycosyl transferases group 1 RL_RS18780 PF13439 Glycosyltransferase Family 4 RL_RS18790 PF04230 Polysaccharide pyruvyl transferase RL_RS18810 PF00535 Glycosyl transferase family 2 RL_RS18830 PF00535 Glycosyl transferase family 2 RL_RS18860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS18860 PF00529 HlyD membrane-fusion protein of T1SS RL_RS18865 PF00005 ABC transporter RL_RS18865 PF00664 ABC transporter transmembrane region RL_RS18885 PF13807 G-rich domain on putative tyrosine kinase RL_RS18885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RL_RS18885 PF02706 Chain length determinant protein RL_RS18895 PF02563 Polysaccharide biosynthesis/export protein RL_RS18910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RL_RS18910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RL_RS18910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RL_RS18915 PF00149 Calcineurin-like phosphoesterase RL_RS18920 PF02321 Outer membrane efflux protein RL_RS18930 PF01738 Dienelactone hydrolase family RL_RS18935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RL_RS18940 PF03167 Uracil DNA glycosylase superfamily RL_RS18945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RL_RS18945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RL_RS18945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RL_RS18945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RL_RS18950 PF01050 Mannose-6-phosphate isomerase RL_RS18950 PF00483 Nucleotidyl transferase RL_RS18965 PF16363 GDP-mannose 4,6 dehydratase RL_RS18975 PF00440 Bacterial regulatory proteins, tetR family RL_RS18975 PF09209 Tetracyclin repressor-like, C-terminal domain RL_RS18980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS18985 PF00005 ABC transporter RL_RS19005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS19005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS19015 PF00893 Small Multidrug Resistance protein RL_RS19025 PF01152 Bacterial-like globin RL_RS19035 PF03992 Antibiotic biosynthesis monooxygenase RL_RS19050 PF03544 Gram-negative bacterial TonB protein C-terminal RL_RS19070 PF01497 Periplasmic binding protein RL_RS19075 PF01032 FecCD transport family RL_RS19080 PF00005 ABC transporter RL_RS19095 PF08281 Sigma-70, region 4 RL_RS19095 PF04542 Sigma-70 region 2 RL_RS19105 PF00072 Response regulator receiver domain RL_RS19110 PF07536 HWE histidine kinase RL_RS19110 PF08447 PAS fold RL_RS19110 PF13426 PAS domain RL_RS19115 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RL_RS19115 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS19120 PF01180 Dihydroorotate dehydrogenase RL_RS19135 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS19135 PF00107 Zinc-binding dehydrogenase RL_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS19140 PF03466 LysR substrate binding domain RL_RS19145 PF01126 Heme oxygenase RL_RS19150 PF00512 His Kinase A (phospho-acceptor) domain RL_RS19150 PF01590 GAF domain RL_RS19150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS19150 PF08446 PAS fold RL_RS19150 PF00360 Phytochrome region RL_RS19155 PF00440 Bacterial regulatory proteins, tetR family RL_RS19155 PF08362 YcdC-like protein, C-terminal region RL_RS19160 PF07687 Peptidase dimerisation domain RL_RS19160 PF01546 Peptidase family M20/M25/M40 RL_RS19170 PF01979 Amidohydrolase family RL_RS19180 PF00005 ABC transporter RL_RS19185 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19190 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19205 PF00873 AcrB/AcrD/AcrF family RL_RS19215 PF02492 CobW/HypB/UreG, nucleotide-binding domain RL_RS19220 PF01730 UreF RL_RS19230 PF00990 Diguanylate cyclase, GGDEF domain RL_RS19240 PF01979 Amidohydrolase family RL_RS19240 PF00449 Urease alpha-subunit, N-terminal domain RL_RS19250 PF07007 Lysozyme inhibitor LprI RL_RS19255 PF00699 Urease beta subunit RL_RS19260 PF06906 Protein of unknown function (DUF1272) RL_RS19265 PF00547 Urease, gamma subunit RL_RS19270 PF01774 UreD urease accessory protein RL_RS19275 PF00005 ABC transporter RL_RS19280 PF00005 ABC transporter RL_RS19280 PF12399 Branched-chain amino acid ATP-binding cassette transporter RL_RS19290 PF02653 Branched-chain amino acid transport system / permease component RL_RS19305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS19305 PF01627 Hpt domain RL_RS19305 PF00512 His Kinase A (phospho-acceptor) domain RL_RS19305 PF00072 Response regulator receiver domain RL_RS19310 PF00072 Response regulator receiver domain RL_RS19310 PF00486 Transcriptional regulatory protein, C terminal RL_RS19315 PF13458 Periplasmic binding protein RL_RS19325 PF00005 ABC transporter RL_RS19330 PF12399 Branched-chain amino acid ATP-binding cassette transporter RL_RS19330 PF00005 ABC transporter RL_RS19335 PF02653 Branched-chain amino acid transport system / permease component RL_RS19335 PF11862 Domain of unknown function (DUF3382) RL_RS19340 PF02653 Branched-chain amino acid transport system / permease component RL_RS19345 PF00459 Inositol monophosphatase family RL_RS19350 PF02397 Bacterial sugar transferase RL_RS19380 PF00072 Response regulator receiver domain RL_RS19380 PF00486 Transcriptional regulatory protein, C terminal RL_RS19390 PF10090 Histidine phosphotransferase C-terminal domain RL_RS19405 PF00588 SpoU rRNA Methylase family RL_RS19415 PF00849 RNA pseudouridylate synthase RL_RS19420 PF04545 Sigma-70, region 4 RL_RS19420 PF00140 Sigma-70 factor, region 1.2 RL_RS19420 PF04542 Sigma-70 region 2 RL_RS19430 PF00709 Adenylosuccinate synthetase RL_RS19445 PF00563 EAL domain RL_RS19445 PF00990 Diguanylate cyclase, GGDEF domain RL_RS19445 PF13185 GAF domain RL_RS19450 PF00920 Dehydratase family RL_RS19455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RL_RS19455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RL_RS19460 PF00873 AcrB/AcrD/AcrF family RL_RS19465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS19470 PF07859 alpha/beta hydrolase fold RL_RS19475 PF03466 LysR substrate binding domain RL_RS19475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS19490 PF03466 LysR substrate binding domain RL_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS19500 PF02245 Methylpurine-DNA glycosylase (MPG) RL_RS19505 PF07690 Major Facilitator Superfamily RL_RS19510 PF13533 Biotin-lipoyl like RL_RS19525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS19525 PF00529 HlyD membrane-fusion protein of T1SS RL_RS19530 PF00873 AcrB/AcrD/AcrF family RL_RS19535 PF00149 Calcineurin-like phosphoesterase RL_RS19545 PF02082 Transcriptional regulator RL_RS19555 PF01261 Xylose isomerase-like TIM barrel RL_RS19560 PF00356 Bacterial regulatory proteins, lacI family RL_RS19565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS19575 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19580 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19580 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS19585 PF00005 ABC transporter RL_RS19585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS19590 PF01261 Xylose isomerase-like TIM barrel RL_RS19595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RL_RS19595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RL_RS19600 PF08532 Beta-galactosidase trimerisation domain RL_RS19600 PF08533 Beta-galactosidase C-terminal domain RL_RS19600 PF02449 Beta-galactosidase RL_RS19615 PF17912 MalK OB fold domain RL_RS19615 PF00005 ABC transporter RL_RS19620 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19625 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19630 PF13416 Bacterial extracellular solute-binding protein RL_RS19635 PF00480 ROK family RL_RS19640 PF01547 Bacterial extracellular solute-binding protein RL_RS19645 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19650 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19660 PF00294 pfkB family carbohydrate kinase RL_RS19665 PF08402 TOBE domain RL_RS19665 PF00005 ABC transporter RL_RS19675 PF01943 Polysaccharide biosynthesis protein RL_RS19680 PF13439 Glycosyltransferase Family 4 RL_RS19680 PF00534 Glycosyl transferases group 1 RL_RS19685 PF00534 Glycosyl transferases group 1 RL_RS19685 PF13439 Glycosyltransferase Family 4 RL_RS19695 PF02397 Bacterial sugar transferase RL_RS19700 PF13614 AAA domain RL_RS19740 PF02397 Bacterial sugar transferase RL_RS19755 PF13360 PQQ-like domain RL_RS19755 PF01011 PQQ enzyme repeat RL_RS19765 PF03734 L,D-transpeptidase catalytic domain RL_RS19795 PF00392 Bacterial regulatory proteins, gntR family RL_RS19795 PF07729 FCD domain RL_RS19810 PF00005 ABC transporter RL_RS19815 PF02653 Branched-chain amino acid transport system / permease component RL_RS19820 PF17912 MalK OB fold domain RL_RS19820 PF03459 TOBE domain RL_RS19820 PF00005 ABC transporter RL_RS19825 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19830 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19835 PF01547 Bacterial extracellular solute-binding protein RL_RS19845 PF07729 FCD domain RL_RS19845 PF00392 Bacterial regulatory proteins, gntR family RL_RS19850 PF13378 Enolase C-terminal domain-like RL_RS19850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS19865 PF01134 Glucose inhibited division protein A RL_RS19875 PF00034 Cytochrome c RL_RS19875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RL_RS19885 PF03737 Aldolase/RraA RL_RS19890 PF13378 Enolase C-terminal domain-like RL_RS19890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS19895 PF00005 ABC transporter RL_RS19895 PF17912 MalK OB fold domain RL_RS19900 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19905 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS19910 PF01547 Bacterial extracellular solute-binding protein RL_RS19915 PF07729 FCD domain RL_RS19915 PF00392 Bacterial regulatory proteins, gntR family RL_RS19920 PF13378 Enolase C-terminal domain-like RL_RS19920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS19925 PF13378 Enolase C-terminal domain-like RL_RS19925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS19930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS19930 PF13378 Enolase C-terminal domain-like RL_RS19975 PF00849 RNA pseudouridylate synthase RL_RS19975 PF01479 S4 domain RL_RS19980 PF00156 Phosphoribosyl transferase domain RL_RS19985 PF03600 Citrate transporter RL_RS19985 PF02080 TrkA-C domain RL_RS19990 PF01259 SAICAR synthetase RL_RS19995 PF00440 Bacterial regulatory proteins, tetR family RL_RS20000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS20000 PF00529 HlyD membrane-fusion protein of T1SS RL_RS20005 PF00873 AcrB/AcrD/AcrF family RL_RS20010 PF02321 Outer membrane efflux protein RL_RS20015 PF00356 Bacterial regulatory proteins, lacI family RL_RS20025 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS20030 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS20035 PF08402 TOBE domain RL_RS20035 PF00005 ABC transporter RL_RS20045 PF13382 Adenine deaminase C-terminal domain RL_RS20045 PF01979 Amidohydrolase family RL_RS20050 PF01297 Zinc-uptake complex component A periplasmic RL_RS20055 PF00005 ABC transporter RL_RS20060 PF00950 ABC 3 transport family RL_RS20065 PF00950 ABC 3 transport family RL_RS20070 PF01546 Peptidase family M20/M25/M40 RL_RS20070 PF07687 Peptidase dimerisation domain RL_RS20075 PF01970 Tripartite tricarboxylate transporter TctA family RL_RS20085 PF03401 Tripartite tricarboxylate transporter family receptor RL_RS20090 PF00158 Sigma-54 interaction domain RL_RS20090 PF02954 Bacterial regulatory protein, Fis family RL_RS20090 PF00072 Response regulator receiver domain RL_RS20095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS20095 PF02743 Cache domain RL_RS20095 PF00512 His Kinase A (phospho-acceptor) domain RL_RS20100 PF00174 Oxidoreductase molybdopterin binding domain RL_RS20125 PF00563 EAL domain RL_RS20125 PF00990 Diguanylate cyclase, GGDEF domain RL_RS20125 PF03707 Bacterial signalling protein N terminal repeat RL_RS20125 PF13188 PAS domain RL_RS20135 PF00871 Acetokinase family RL_RS20140 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS20140 PF09363 XFP C-terminal domain RL_RS20140 PF09364 XFP N-terminal domain RL_RS20155 PF01494 FAD binding domain RL_RS20160 PF13458 Periplasmic binding protein RL_RS20170 PF02653 Branched-chain amino acid transport system / permease component RL_RS20175 PF12399 Branched-chain amino acid ATP-binding cassette transporter RL_RS20175 PF00005 ABC transporter RL_RS20180 PF12857 TOBE-like domain RL_RS20180 PF00005 ABC transporter RL_RS20205 PF03062 MBOAT, membrane-bound O-acyltransferase family RL_RS20420 PF08447 PAS fold RL_RS20420 PF00563 EAL domain RL_RS20420 PF08448 PAS fold RL_RS20420 PF00990 Diguanylate cyclase, GGDEF domain RL_RS20430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RL_RS20430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RL_RS20430 PF01842 ACT domain RL_RS20440 PF13505 Outer membrane protein beta-barrel domain RL_RS20450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RL_RS20450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RL_RS20450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RL_RS20450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RL_RS20455 PF17862 AAA+ lid domain RL_RS20455 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS20455 PF06480 FtsH Extracellular RL_RS20455 PF01434 Peptidase family M41 RL_RS20460 PF01171 PP-loop family RL_RS20470 PF00691 OmpA family RL_RS20475 PF07676 WD40-like Beta Propeller Repeat RL_RS20475 PF04052 TolB amino-terminal domain RL_RS20490 PF02472 Biopolymer transport protein ExbD/TolR RL_RS20495 PF01618 MotA/TolQ/ExbB proton channel family RL_RS20500 PF03061 Thioesterase superfamily RL_RS20530 PF13277 YmdB-like protein RL_RS20545 PF01709 Transcriptional regulator RL_RS20550 PF00296 Luciferase-like monooxygenase RL_RS20555 PF00672 HAMP domain RL_RS20555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS20560 PF02075 Crossover junction endodeoxyribonuclease RuvC RL_RS20575 PF07499 RuvA, C-terminal domain RL_RS20575 PF01330 RuvA N terminal domain RL_RS20580 PF17864 RuvB AAA lid domain RL_RS20580 PF05491 RuvB C-terminal winged helix domain RL_RS20580 PF05496 Holliday junction DNA helicase RuvB P-loop domain RL_RS20585 PF00149 Calcineurin-like phosphoesterase RL_RS20590 PF00293 NUDIX domain RL_RS20595 PF05163 DinB family RL_RS20605 PF09924 Uncharacterised conserved protein (DUF2156) RL_RS20605 PF03706 Lysylphosphatidylglycerol synthase TM region RL_RS20615 PF00924 Mechanosensitive ion channel RL_RS20625 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RL_RS20625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RL_RS20670 PF02779 Transketolase, pyrimidine binding domain RL_RS20670 PF02780 Transketolase, C-terminal domain RL_RS20670 PF00456 Transketolase, thiamine diphosphate binding domain RL_RS20675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RL_RS20675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RL_RS20695 PF00999 Sodium/hydrogen exchanger family RL_RS20695 PF03471 Transporter associated domain RL_RS20700 PF00162 Phosphoglycerate kinase RL_RS20705 PF00274 Fructose-bisphosphate aldolase class-I RL_RS20710 PF02567 Phenazine biosynthesis-like protein RL_RS20730 PF01197 Ribosomal protein L31 RL_RS20735 PF00005 ABC transporter RL_RS20735 PF00664 ABC transporter transmembrane region RL_RS20740 PF03401 Tripartite tricarboxylate transporter family receptor RL_RS20745 PF07411 Domain of unknown function (DUF1508) RL_RS20760 PF00691 OmpA family RL_RS20760 PF01389 OmpA-like transmembrane domain RL_RS20770 PF00459 Inositol monophosphatase family RL_RS20775 PF00440 Bacterial regulatory proteins, tetR family RL_RS20785 PF01339 CheB methylesterase RL_RS20785 PF00072 Response regulator receiver domain RL_RS20790 PF03705 CheR methyltransferase, all-alpha domain RL_RS20790 PF01739 CheR methyltransferase, SAM binding domain RL_RS20795 PF01584 CheW-like domain RL_RS20800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS20800 PF00672 HAMP domain RL_RS20800 PF12729 Four helix bundle sensory module for signal transduction RL_RS20805 PF00672 HAMP domain RL_RS20805 PF02203 Tar ligand binding domain homologue RL_RS20805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS20810 PF02203 Tar ligand binding domain homologue RL_RS20810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS20810 PF00672 HAMP domain RL_RS20815 PF01584 CheW-like domain RL_RS20820 PF02895 Signal transducing histidine kinase, homodimeric domain RL_RS20820 PF01627 Hpt domain RL_RS20820 PF01584 CheW-like domain RL_RS20820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS20825 PF00486 Transcriptional regulatory protein, C terminal RL_RS20825 PF00072 Response regulator receiver domain RL_RS20855 PF01022 Bacterial regulatory protein, arsR family RL_RS20870 PF00731 AIR carboxylase RL_RS20875 PF02222 ATP-grasp domain RL_RS20875 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RL_RS20880 PF00444 Ribosomal protein L36 RL_RS20910 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS20915 PF00106 short chain dehydrogenase RL_RS20920 PF01965 DJ-1/PfpI family RL_RS20920 PF12833 Helix-turn-helix domain RL_RS20930 PF03466 LysR substrate binding domain RL_RS20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS20935 PF14552 Tautomerase enzyme RL_RS20950 PF01810 LysE type translocator RL_RS20955 PF02887 Pyruvate kinase, alpha/beta domain RL_RS20955 PF00224 Pyruvate kinase, barrel domain RL_RS20975 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) RL_RS20980 PF05951 Bacterial protein of unknown function (DUF882) RL_RS20985 PF02954 Bacterial regulatory protein, Fis family RL_RS20985 PF00072 Response regulator receiver domain RL_RS20985 PF00158 Sigma-54 interaction domain RL_RS20995 PF00425 chorismate binding enzyme RL_RS20995 PF04715 Anthranilate synthase component I, N terminal region RL_RS21015 PF16653 Saccharopine dehydrogenase C-terminal domain RL_RS21015 PF03435 Saccharopine dehydrogenase NADP binding domain RL_RS21030 PF00149 Calcineurin-like phosphoesterase RL_RS21030 PF02872 5'-nucleotidase, C-terminal domain RL_RS21035 PF00762 Ferrochelatase RL_RS21040 PF01145 SPFH domain / Band 7 family RL_RS21040 PF16200 C-terminal region of band_7 RL_RS21050 PF00571 CBS domain RL_RS21050 PF01380 SIS domain RL_RS21060 PF00483 Nucleotidyl transferase RL_RS21065 PF13406 Transglycosylase SLT domain RL_RS21075 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RL_RS21075 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS21080 PF04898 Glutamate synthase central domain RL_RS21080 PF01493 GXGXG motif RL_RS21080 PF01645 Conserved region in glutamate synthase RL_RS21080 PF00310 Glutamine amidotransferases class-II RL_RS21085 PF01212 Beta-eliminating lyase RL_RS21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS21090 PF03466 LysR substrate binding domain RL_RS21095 PF13593 SBF-like CPA transporter family (DUF4137) RL_RS21100 PF00011 Hsp20/alpha crystallin family RL_RS21110 PF00459 Inositol monophosphatase family RL_RS21120 PF00072 Response regulator receiver domain RL_RS21160 PF01970 Tripartite tricarboxylate transporter TctA family RL_RS21170 PF03401 Tripartite tricarboxylate transporter family receptor RL_RS21185 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS21190 PF00072 Response regulator receiver domain RL_RS21190 PF00486 Transcriptional regulatory protein, C terminal RL_RS21195 PF00512 His Kinase A (phospho-acceptor) domain RL_RS21195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS21205 PF14403 Circularly permuted ATP-grasp type 2 RL_RS21205 PF04168 A predicted alpha-helical domain with a conserved ER motif. RL_RS21210 PF01841 Transglutaminase-like superfamily RL_RS21210 PF08379 Bacterial transglutaminase-like N-terminal region RL_RS21220 PF00343 Carbohydrate phosphorylase RL_RS21225 PF02806 Alpha amylase, C-terminal all-beta domain RL_RS21225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RL_RS21225 PF00128 Alpha amylase, catalytic domain RL_RS21230 PF00483 Nucleotidyl transferase RL_RS21235 PF00534 Glycosyl transferases group 1 RL_RS21235 PF08323 Starch synthase catalytic domain RL_RS21240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RL_RS21240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RL_RS21240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RL_RS21240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RL_RS21245 PF00128 Alpha amylase, catalytic domain RL_RS21245 PF18390 Glycogen debranching enzyme C-terminal domain RL_RS21245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RL_RS21250 PF01575 MaoC like domain RL_RS21265 PF17806 Sarcosine oxidase A3 domain RL_RS21265 PF08669 Glycine cleavage T-protein C-terminal barrel domain RL_RS21265 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS21265 PF01571 Aminomethyltransferase folate-binding domain RL_RS21280 PF01266 FAD dependent oxidoreductase RL_RS21290 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS21290 PF00072 Response regulator receiver domain RL_RS21295 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS21300 PF01165 Ribosomal protein S21 RL_RS21310 PF13426 PAS domain RL_RS21310 PF08447 PAS fold RL_RS21310 PF07536 HWE histidine kinase RL_RS21320 PF02233 NAD(P) transhydrogenase beta subunit RL_RS21325 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch RL_RS21330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RL_RS21330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RL_RS21345 PF08448 PAS fold RL_RS21345 PF08447 PAS fold RL_RS21345 PF00563 EAL domain RL_RS21345 PF00990 Diguanylate cyclase, GGDEF domain RL_RS21350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RL_RS21355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RL_RS21360 PF03480 Bacterial extracellular solute-binding protein, family 7 RL_RS21365 PF07722 Peptidase C26 RL_RS21370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RL_RS21370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RL_RS21375 PF00356 Bacterial regulatory proteins, lacI family RL_RS21380 PF01047 MarR family RL_RS21385 PF02633 Creatinine amidohydrolase RL_RS21390 PF02492 CobW/HypB/UreG, nucleotide-binding domain RL_RS21390 PF07683 Cobalamin synthesis protein cobW C-terminal domain RL_RS21410 PF06426 Serine acetyltransferase, N-terminal RL_RS21410 PF00132 Bacterial transferase hexapeptide (six repeats) RL_RS21415 PF08448 PAS fold RL_RS21415 PF00990 Diguanylate cyclase, GGDEF domain RL_RS21430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RL_RS21430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RL_RS21435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS21435 PF03466 LysR substrate binding domain RL_RS21465 PF01081 KDPG and KHG aldolase RL_RS21470 PF01928 CYTH domain RL_RS21485 PF00581 Rhodanese-like domain RL_RS21485 PF17773 UPF0176 acylphosphatase like domain RL_RS21490 PF00563 EAL domain RL_RS21490 PF03707 Bacterial signalling protein N terminal repeat RL_RS21490 PF00990 Diguanylate cyclase, GGDEF domain RL_RS21495 PF00232 Glycosyl hydrolase family 1 RL_RS21505 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS21505 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS21515 PF13407 Periplasmic binding protein domain RL_RS21520 PF02653 Branched-chain amino acid transport system / permease component RL_RS21525 PF00005 ABC transporter RL_RS21530 PF00356 Bacterial regulatory proteins, lacI family RL_RS21535 PF01261 Xylose isomerase-like TIM barrel RL_RS21540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RL_RS21540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RL_RS21545 PF00356 Bacterial regulatory proteins, lacI family RL_RS21550 PF07690 Major Facilitator Superfamily RL_RS21555 PF13533 Biotin-lipoyl like RL_RS21560 PF00440 Bacterial regulatory proteins, tetR family RL_RS21565 PF12833 Helix-turn-helix domain RL_RS21570 PF03741 Integral membrane protein TerC family RL_RS21570 PF03471 Transporter associated domain RL_RS21575 PF00749 tRNA synthetases class I (E and Q), catalytic domain RL_RS21580 PF01336 OB-fold nucleic acid binding domain RL_RS21580 PF00152 tRNA synthetases class II (D, K and N) RL_RS21590 PF06719 AraC-type transcriptional regulator N-terminus RL_RS21590 PF12833 Helix-turn-helix domain RL_RS21600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS21600 PF03466 LysR substrate binding domain RL_RS21605 PF13416 Bacterial extracellular solute-binding protein RL_RS21610 PF08402 TOBE domain RL_RS21610 PF00005 ABC transporter RL_RS21615 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21620 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21625 PF00171 Aldehyde dehydrogenase family RL_RS21640 PF00512 His Kinase A (phospho-acceptor) domain RL_RS21640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS21640 PF00672 HAMP domain RL_RS21645 PF00072 Response regulator receiver domain RL_RS21645 PF00486 Transcriptional regulatory protein, C terminal RL_RS21670 PF00923 Transaldolase/Fructose-6-phosphate aldolase RL_RS21675 PF13936 Helix-turn-helix domain RL_RS21675 PF04198 Putative sugar-binding domain RL_RS21680 PF12833 Helix-turn-helix domain RL_RS21680 PF02805 Metal binding domain of Ada RL_RS21680 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RL_RS21680 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RL_RS21690 PF00730 HhH-GPD superfamily base excision DNA repair protein RL_RS21690 PF00633 Helix-hairpin-helix motif RL_RS21690 PF10576 Iron-sulfur binding domain of endonuclease III RL_RS21695 PF00440 Bacterial regulatory proteins, tetR family RL_RS21695 PF08361 MAATS-type transcriptional repressor, C-terminal region RL_RS21715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RL_RS21715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RL_RS21720 PF13419 Haloacid dehalogenase-like hydrolase RL_RS21725 PF01232 Mannitol dehydrogenase Rossmann domain RL_RS21725 PF08125 Mannitol dehydrogenase C-terminal domain RL_RS21730 PF00005 ABC transporter RL_RS21730 PF08402 TOBE domain RL_RS21735 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21760 PF00480 ROK family RL_RS21765 PF00728 Glycosyl hydrolase family 20, catalytic domain RL_RS21765 PF02838 Glycosyl hydrolase family 20, domain 2 RL_RS21770 PF00873 AcrB/AcrD/AcrF family RL_RS21785 PF02566 OsmC-like protein RL_RS21800 PF02653 Branched-chain amino acid transport system / permease component RL_RS21805 PF00005 ABC transporter RL_RS21810 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RL_RS21815 PF00392 Bacterial regulatory proteins, gntR family RL_RS21815 PF07729 FCD domain RL_RS21820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RL_RS21820 PF13378 Enolase C-terminal domain-like RL_RS21835 PF00672 HAMP domain RL_RS21835 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS21835 PF02743 Cache domain RL_RS21840 PF00356 Bacterial regulatory proteins, lacI family RL_RS21855 PF08450 SMP-30/Gluconolactonase/LRE-like region RL_RS21865 PF17912 MalK OB fold domain RL_RS21865 PF00005 ABC transporter RL_RS21865 PF03459 TOBE domain RL_RS21870 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21875 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21880 PF01547 Bacterial extracellular solute-binding protein RL_RS21885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS21885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS21890 PF00356 Bacterial regulatory proteins, lacI family RL_RS21895 PF00703 Glycosyl hydrolases family 2 RL_RS21895 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 RL_RS21895 PF02836 Glycosyl hydrolases family 2, TIM barrel domain RL_RS21900 PF00005 ABC transporter RL_RS21900 PF17912 MalK OB fold domain RL_RS21905 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21910 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS21915 PF01547 Bacterial extracellular solute-binding protein RL_RS21920 PF00356 Bacterial regulatory proteins, lacI family RL_RS21925 PF06508 Queuosine biosynthesis protein QueC RL_RS21930 PF01242 6-pyruvoyl tetrahydropterin synthase RL_RS21935 PF04055 Radical SAM superfamily RL_RS21940 PF00211 Adenylate and Guanylate cyclase catalytic domain RL_RS21945 PF00268 Ribonucleotide reductase, small chain RL_RS21950 PF08343 Ribonucleotide reductase N-terminal RL_RS21950 PF00317 Ribonucleotide reductase, all-alpha domain RL_RS21950 PF02867 Ribonucleotide reductase, barrel domain RL_RS21955 PF07972 NrdI Flavodoxin like RL_RS21965 PF00403 Heavy-metal-associated domain RL_RS21970 PF13411 MerR HTH family regulatory protein RL_RS21975 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RL_RS21975 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS21975 PF13247 4Fe-4S dicluster domain RL_RS21980 PF01641 SelR domain RL_RS21985 PF13426 PAS domain RL_RS21985 PF00158 Sigma-54 interaction domain RL_RS21985 PF02954 Bacterial regulatory protein, Fis family RL_RS21990 PF00171 Aldehyde dehydrogenase family RL_RS22000 PF01965 DJ-1/PfpI family RL_RS22015 PF01699 Sodium/calcium exchanger protein RL_RS22025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RL_RS22030 PF00873 AcrB/AcrD/AcrF family RL_RS22035 PF00672 HAMP domain RL_RS22035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS22070 PF08460 Bacterial SH3 domain RL_RS22070 PF01551 Peptidase family M23 RL_RS22075 PF07724 AAA domain (Cdc48 subfamily) RL_RS22075 PF02861 Clp amino terminal domain, pathogenicity island component RL_RS22075 PF17871 AAA lid domain RL_RS22075 PF00004 ATPase family associated with various cellular activities (AAA) RL_RS22075 PF10431 C-terminal, D2-small domain, of ClpB protein RL_RS22085 PF05175 Methyltransferase small domain RL_RS22085 PF17827 PrmC N-terminal domain RL_RS22090 PF03462 PCRF domain RL_RS22090 PF00472 RF-1 domain RL_RS22095 PF05524 PEP-utilising enzyme, N-terminal RL_RS22095 PF02896 PEP-utilising enzyme, TIM barrel domain RL_RS22095 PF00391 PEP-utilising enzyme, mobile domain RL_RS22095 PF01590 GAF domain RL_RS22100 PF00696 Amino acid kinase family RL_RS22100 PF01842 ACT domain RL_RS22100 PF13840 ACT domain RL_RS22115 PF00795 Carbon-nitrogen hydrolase RL_RS22120 PF00462 Glutaredoxin RL_RS22125 PF00156 Phosphoribosyl transferase domain RL_RS22130 PF08241 Methyltransferase domain RL_RS22145 PF00293 NUDIX domain RL_RS22150 PF00583 Acetyltransferase (GNAT) family RL_RS22155 PF01960 ArgJ family RL_RS22160 PF00639 PPIC-type PPIASE domain RL_RS22165 PF07517 SecA DEAD-like domain RL_RS22165 PF01043 SecA preprotein cross-linking domain RL_RS22165 PF07516 SecA Wing and Scaffold domain RL_RS22165 PF02810 SEC-C motif RL_RS22180 PF13193 AMP-binding enzyme C-terminal domain RL_RS22180 PF00501 AMP-binding enzyme RL_RS22185 PF00248 Aldo/keto reductase family RL_RS22215 PF00999 Sodium/hydrogen exchanger family RL_RS22215 PF02254 TrkA-N domain RL_RS22240 PF12833 Helix-turn-helix domain RL_RS22240 PF06029 AlkA N-terminal domain RL_RS22240 PF02805 Metal binding domain of Ada RL_RS22240 PF00730 HhH-GPD superfamily base excision DNA repair protein RL_RS22245 PF00749 tRNA synthetases class I (E and Q), catalytic domain RL_RS22255 PF00106 short chain dehydrogenase RL_RS22265 PF01923 Cobalamin adenosyltransferase RL_RS22275 PF01012 Electron transfer flavoprotein domain RL_RS22280 PF00766 Electron transfer flavoprotein FAD-binding domain RL_RS22280 PF01012 Electron transfer flavoprotein domain RL_RS22285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RL_RS22285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RL_RS22290 PF08534 Redoxin RL_RS22295 PF14698 Argininosuccinate lyase C-terminal RL_RS22295 PF00206 Lyase RL_RS22305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RL_RS22305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RL_RS22315 PF00072 Response regulator receiver domain RL_RS22320 PF00156 Phosphoribosyl transferase domain RL_RS22330 PF00005 ABC transporter RL_RS22350 PF04752 ChaC-like protein RL_RS22365 PF02153 Prephenate dehydrogenase RL_RS22370 PF00155 Aminotransferase class I and II RL_RS22375 PF01209 ubiE/COQ5 methyltransferase family RL_RS22380 PF00753 Metallo-beta-lactamase superfamily RL_RS22380 PF16123 Hydroxyacylglutathione hydrolase C-terminus RL_RS22400 PF00830 Ribosomal L28 family RL_RS22420 PF06213 Cobalamin biosynthesis protein CobT RL_RS22420 PF11775 Cobalamin biosynthesis protein CobT VWA domain RL_RS22425 PF08406 CbbQ/NirQ/NorQ C-terminal RL_RS22425 PF12556 Cobaltochelatase CobS subunit N terminal RL_RS22425 PF07728 AAA domain (dynein-related subfamily) RL_RS22430 PF00226 DnaJ domain RL_RS22435 PF01722 BolA-like protein RL_RS22440 PF00571 CBS domain RL_RS22440 PF01595 Cyclin M transmembrane N-terminal domain RL_RS22440 PF03471 Transporter associated domain RL_RS22445 PF01761 3-dehydroquinate synthase RL_RS22450 PF01202 Shikimate kinase RL_RS22460 PF00589 Phage integrase family RL_RS22460 PF02899 Phage integrase, N-terminal SAM-like domain RL_RS22465 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RL_RS22470 PF03734 L,D-transpeptidase catalytic domain RL_RS22475 PF01206 Sulfurtransferase TusA RL_RS22480 PF03480 Bacterial extracellular solute-binding protein, family 7 RL_RS22490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RL_RS22495 PF00392 Bacterial regulatory proteins, gntR family RL_RS22495 PF07729 FCD domain RL_RS22500 PF02492 CobW/HypB/UreG, nucleotide-binding domain RL_RS22500 PF07683 Cobalamin synthesis protein cobW C-terminal domain RL_RS22505 PF00768 D-alanyl-D-alanine carboxypeptidase RL_RS22505 PF07943 Penicillin-binding protein 5, C-terminal domain RL_RS22510 PF01546 Peptidase family M20/M25/M40 RL_RS22510 PF07687 Peptidase dimerisation domain RL_RS22520 PF06751 Ethanolamine ammonia lyase large subunit (EutB) RL_RS22525 PF05985 Ethanolamine ammonia-lyase light chain (EutC) RL_RS22530 PF13520 Amino acid permease RL_RS22555 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RL_RS22555 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RL_RS22555 PF13288 DXP reductoisomerase C-terminal domain RL_RS22560 PF00005 ABC transporter RL_RS22560 PF17912 MalK OB fold domain RL_RS22565 PF07944 Beta-L-arabinofuranosidase, GH127 RL_RS22570 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22575 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22580 PF01547 Bacterial extracellular solute-binding protein RL_RS22585 PF00356 Bacterial regulatory proteins, lacI family RL_RS22590 PF00155 Aminotransferase class I and II RL_RS22600 PF01103 Surface antigen RL_RS22600 PF07244 Surface antigen variable number repeat RL_RS22600 PF17243 POTRA domain TamA domain 1 RL_RS22615 PF00491 Arginase family RL_RS22620 PF00202 Aminotransferase class-III RL_RS22625 PF01584 CheW-like domain RL_RS22630 PF13426 PAS domain RL_RS22630 PF08447 PAS fold RL_RS22630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS22635 PF07690 Major Facilitator Superfamily RL_RS22645 PF02634 FdhD/NarQ family RL_RS22650 PF00384 Molybdopterin oxidoreductase RL_RS22650 PF01568 Molydopterin dinucleotide binding domain RL_RS22650 PF00037 4Fe-4S binding domain RL_RS22650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RL_RS22650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RL_RS22655 PF00037 4Fe-4S binding domain RL_RS22655 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RL_RS22655 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit RL_RS22665 PF03466 LysR substrate binding domain RL_RS22665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS22670 PF01022 Bacterial regulatory protein, arsR family RL_RS22680 PF00376 MerR family regulatory protein RL_RS22680 PF09278 MerR, DNA binding RL_RS22695 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22700 PF00005 ABC transporter RL_RS22705 PF09084 NMT1/THI5 like RL_RS22715 PF02397 Bacterial sugar transferase RL_RS22720 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RL_RS22730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RL_RS22730 PF02874 ATP synthase alpha/beta family, beta-barrel domain RL_RS22735 PF00231 ATP synthase RL_RS22740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RL_RS22740 PF00306 ATP synthase alpha/beta chain, C terminal domain RL_RS22740 PF02874 ATP synthase alpha/beta family, beta-barrel domain RL_RS22745 PF00213 ATP synthase delta (OSCP) subunit RL_RS22755 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RL_RS22755 PF18074 Primosomal protein N C-terminal domain RL_RS22755 PF17764 3′ DNA-binding domain (3′BD) RL_RS22755 PF00270 DEAD/DEAH box helicase RL_RS22760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS22760 PF00005 ABC transporter RL_RS22765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS22765 PF00005 ABC transporter RL_RS22770 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22770 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS22775 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22785 PF01229 Glycosyl hydrolases family 39 RL_RS22795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RL_RS22795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RL_RS22800 PF00920 Dehydratase family RL_RS22805 PF04909 Amidohydrolase RL_RS22810 PF00701 Dihydrodipicolinate synthetase family RL_RS22825 PF02899 Phage integrase, N-terminal SAM-like domain RL_RS22825 PF00589 Phage integrase family RL_RS22835 PF01292 Prokaryotic cytochrome b561 RL_RS22840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RL_RS22840 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS22860 PF02817 e3 binding domain RL_RS22860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RL_RS22860 PF00364 Biotin-requiring enzyme RL_RS22870 PF02779 Transketolase, pyrimidine binding domain RL_RS22870 PF16870 2-oxoglutarate dehydrogenase C-terminal RL_RS22870 PF00676 Dehydrogenase E1 component RL_RS22870 PF16078 2-oxoglutarate dehydrogenase N-terminus RL_RS22875 PF00549 CoA-ligase RL_RS22875 PF02629 CoA binding domain RL_RS22885 PF08442 ATP-grasp domain RL_RS22885 PF00549 CoA-ligase RL_RS22890 PF00056 lactate/malate dehydrogenase, NAD binding domain RL_RS22890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RL_RS22895 PF03969 AFG1-like ATPase RL_RS22900 PF02974 Protease inhibitor Inh RL_RS22910 PF13085 2Fe-2S iron-sulfur cluster binding domain RL_RS22910 PF13237 4Fe-4S dicluster domain RL_RS22915 PF00890 FAD binding domain RL_RS22915 PF02910 Fumarate reductase flavoprotein C-term RL_RS22925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RL_RS22935 PF01042 Endoribonuclease L-PSP RL_RS22940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS22940 PF03466 LysR substrate binding domain RL_RS22945 PF00005 ABC transporter RL_RS22945 PF08402 TOBE domain RL_RS22950 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22965 PF00491 Arginase family RL_RS22970 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS22975 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22980 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS22985 PF02423 Ornithine cyclodeaminase/mu-crystallin family RL_RS22990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS22990 PF03466 LysR substrate binding domain RL_RS22995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RL_RS23000 PF02441 Flavoprotein RL_RS23005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS23015 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23020 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23020 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS23025 PF00005 ABC transporter RL_RS23025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS23030 PF00005 ABC transporter RL_RS23030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS23040 PF00221 Aromatic amino acid lyase RL_RS23045 PF00155 Aminotransferase class I and II RL_RS23050 PF13382 Adenine deaminase C-terminal domain RL_RS23050 PF01979 Amidohydrolase family RL_RS23060 PF03480 Bacterial extracellular solute-binding protein, family 7 RL_RS23070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RL_RS23070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RL_RS23075 PF00202 Aminotransferase class-III RL_RS23090 PF00392 Bacterial regulatory proteins, gntR family RL_RS23090 PF07729 FCD domain RL_RS23095 PF07729 FCD domain RL_RS23095 PF00392 Bacterial regulatory proteins, gntR family RL_RS23105 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23110 PF00701 Dihydrodipicolinate synthetase family RL_RS23115 PF04324 BFD-like [2Fe-2S] binding domain RL_RS23115 PF07992 Pyridine nucleotide-disulphide oxidoreductase RL_RS23120 PF00005 ABC transporter RL_RS23125 PF01979 Amidohydrolase family RL_RS23125 PF00449 Urease alpha-subunit, N-terminal domain RL_RS23135 PF00933 Glycosyl hydrolase family 3 N terminal domain RL_RS23155 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RL_RS23155 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RL_RS23160 PF00814 Glycoprotease family RL_RS23165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RL_RS23165 PF03900 Porphobilinogen deaminase, C-terminal domain RL_RS23190 PF00117 Glutamine amidotransferase class-I RL_RS23200 PF02325 YGGT family RL_RS23205 PF02594 Uncharacterised ACR, YggU family COG1872 RL_RS23210 PF00719 Inorganic pyrophosphatase RL_RS23220 PF00009 Elongation factor Tu GTP binding domain RL_RS23220 PF03144 Elongation factor Tu domain 2 RL_RS23220 PF00679 Elongation factor G C-terminus RL_RS23225 PF01432 Peptidase family M3 RL_RS23250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RL_RS23255 PF02374 Anion-transporting ATPase RL_RS23260 PF00764 Arginosuccinate synthase RL_RS23265 PF00106 short chain dehydrogenase RL_RS23270 PF01810 LysE type translocator RL_RS23280 PF00005 ABC transporter RL_RS23285 PF02653 Branched-chain amino acid transport system / permease component RL_RS23295 PF04055 Radical SAM superfamily RL_RS23305 PF04542 Sigma-70 region 2 RL_RS23305 PF04545 Sigma-70, region 4 RL_RS23315 PF01329 Pterin 4 alpha carbinolamine dehydratase RL_RS23325 PF02834 LigT like Phosphoesterase RL_RS23330 PF13472 GDSL-like Lipase/Acylhydrolase family RL_RS23335 PF00005 ABC transporter RL_RS23345 PF01027 Inhibitor of apoptosis-promoting Bax1 RL_RS23365 PF00694 Aconitase C-terminal domain RL_RS23365 PF00330 Aconitase family (aconitate hydratase) RL_RS23370 PF00005 ABC transporter RL_RS23375 PF03379 CcmB protein RL_RS23380 PF01578 Cytochrome C assembly protein RL_RS23385 PF04995 Heme exporter protein D (CcmD) RL_RS23390 PF08534 Redoxin RL_RS23395 PF10755 Protein of unknown function (DUF2585) RL_RS23400 PF04279 Intracellular septation protein A RL_RS23405 PF02881 SRP54-type protein, helical bundle domain RL_RS23405 PF00448 SRP54-type protein, GTPase domain RL_RS23410 PF00919 Uncharacterized protein family UPF0004 RL_RS23410 PF04055 Radical SAM superfamily RL_RS23415 PF01678 Diaminopimelate epimerase RL_RS23425 PF00448 SRP54-type protein, GTPase domain RL_RS23425 PF02881 SRP54-type protein, helical bundle domain RL_RS23425 PF02978 Signal peptide binding domain RL_RS23430 PF01817 Chorismate mutase type II RL_RS23430 PF02153 Prephenate dehydrogenase RL_RS23435 PF00886 Ribosomal protein S16 RL_RS23440 PF01782 RimM N-terminal domain RL_RS23440 PF05239 PRC-barrel domain RL_RS23445 PF01746 tRNA (Guanine-1)-methyltransferase RL_RS23450 PF01245 Ribosomal protein L19 RL_RS23455 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS23460 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23465 PF00330 Aconitase family (aconitate hydratase) RL_RS23475 PF00248 Aldo/keto reductase family RL_RS23485 PF00486 Transcriptional regulatory protein, C terminal RL_RS23485 PF00072 Response regulator receiver domain RL_RS23500 PF03548 Outer membrane lipoprotein carrier protein LolA RL_RS23505 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RL_RS23505 PF01580 FtsK/SpoIIIE family RL_RS23505 PF17854 FtsK alpha domain RL_RS23505 PF09397 Ftsk gamma domain RL_RS23510 PF00909 Ammonium Transporter Family RL_RS23515 PF00543 Nitrogen regulatory protein P-II RL_RS23525 PF01494 FAD binding domain RL_RS23530 PF03966 Trm112p-like protein RL_RS23540 PF00085 Thioredoxin RL_RS23565 PF00392 Bacterial regulatory proteins, gntR family RL_RS23565 PF07729 FCD domain RL_RS23570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS23575 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23580 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS23580 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23595 PF00005 ABC transporter RL_RS23595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS23605 PF00005 ABC transporter RL_RS23610 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23620 PF00171 Aldehyde dehydrogenase family RL_RS23625 PF01266 FAD dependent oxidoreductase RL_RS23630 PF07063 Domain of unknown function (DUF1338) RL_RS23635 PF03466 LysR substrate binding domain RL_RS23635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RL_RS23645 PF00534 Glycosyl transferases group 1 RL_RS23645 PF13439 Glycosyltransferase Family 4 RL_RS23655 PF00534 Glycosyl transferases group 1 RL_RS23680 PF00550 Phosphopantetheine attachment site RL_RS23685 PF12544 Lysine-2,3-aminomutase RL_RS23685 PF04055 Radical SAM superfamily RL_RS23690 PF00152 tRNA synthetases class II (D, K and N) RL_RS23695 PF08207 Elongation factor P (EF-P) KOW-like domain RL_RS23695 PF01132 Elongation factor P (EF-P) OB domain RL_RS23695 PF09285 Elongation factor P, C-terminal RL_RS23700 PF13580 SIS domain RL_RS23705 PF01979 Amidohydrolase family RL_RS23710 PF01380 SIS domain RL_RS23715 PF07702 UTRA domain RL_RS23715 PF00392 Bacterial regulatory proteins, gntR family RL_RS23725 PF04204 Homoserine O-succinyltransferase RL_RS23730 PF06472 ABC transporter transmembrane region 2 RL_RS23730 PF00005 ABC transporter RL_RS23740 PF00005 ABC transporter RL_RS23740 PF16326 ABC transporter C-terminal domain RL_RS23755 PF07690 Major Facilitator Superfamily RL_RS23760 PF01435 Peptidase family M48 RL_RS23765 PF00140 Sigma-70 factor, region 1.2 RL_RS23765 PF04542 Sigma-70 region 2 RL_RS23765 PF04545 Sigma-70, region 4 RL_RS23770 PF02559 CarD-like/TRCF domain RL_RS23775 PF00037 4Fe-4S binding domain RL_RS23775 PF11953 Domain of unknown function (DUF3470) RL_RS23800 PF02803 Thiolase, C-terminal domain RL_RS23800 PF00108 Thiolase, N-terminal domain RL_RS23805 PF07879 PHB/PHA accumulation regulator DNA-binding domain RL_RS23805 PF05233 PHB accumulation regulatory domain RL_RS23815 PF01783 Ribosomal L32p protein family RL_RS23830 PF00912 Transglycosylase RL_RS23835 PF00348 Polyprenyl synthetase RL_RS23840 PF00155 Aminotransferase class I and II RL_RS23845 PF04551 GcpE protein RL_RS23850 PF07690 Major Facilitator Superfamily RL_RS23855 PF08220 DeoR-like helix-turn-helix domain RL_RS23855 PF00455 DeoR C terminal sensor domain RL_RS23860 PF00892 EamA-like transporter family RL_RS23865 PF00497 Bacterial extracellular solute-binding proteins, family 3 RL_RS23870 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23875 PF00005 ABC transporter RL_RS23880 PF03358 NADPH-dependent FMN reductase RL_RS23885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RL_RS23885 PF00364 Biotin-requiring enzyme RL_RS23885 PF00289 Biotin carboxylase, N-terminal domain RL_RS23885 PF02785 Biotin carboxylase C-terminal domain RL_RS23885 PF02436 Conserved carboxylase domain RL_RS23885 PF00682 HMGL-like RL_RS23895 PF00005 ABC transporter RL_RS23895 PF00664 ABC transporter transmembrane region RL_RS23915 PF10091 Putative glucoamylase RL_RS23915 PF06165 Glycosyltransferase family 36 RL_RS23915 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain RL_RS23925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS23925 PF00005 ABC transporter RL_RS23930 PF00005 ABC transporter RL_RS23930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RL_RS23935 PF12911 N-terminal TM domain of oligopeptide transport permease C RL_RS23935 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23940 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS23945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS23950 PF01244 Membrane dipeptidase (Peptidase family M19) RL_RS23955 PF02653 Branched-chain amino acid transport system / permease component RL_RS23960 PF00005 ABC transporter RL_RS23965 PF13407 Periplasmic binding protein domain RL_RS23975 PF00884 Sulfatase RL_RS23975 PF16347 Domain of unknown function (DUF4976) RL_RS23980 PF16363 GDP-mannose 4,6 dehydratase RL_RS24025 PF02796 Helix-turn-helix domain of resolvase RL_RS24025 PF00239 Resolvase, N terminal domain RL_RS24040 PF00589 Phage integrase family RL_RS24040 PF13495 Phage integrase, N-terminal SAM-like domain RL_RS24065 PF00829 Ribosomal prokaryotic L21 protein RL_RS24070 PF01016 Ribosomal L27 protein RL_RS24090 PF01926 50S ribosome-binding GTPase RL_RS24090 PF01018 GTP1/OBG RL_RS24095 PF00696 Amino acid kinase family RL_RS24095 PF01472 PUA domain RL_RS24100 PF00171 Aldehyde dehydrogenase family RL_RS24105 PF01467 Cytidylyltransferase-like RL_RS24115 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS24120 PF03459 TOBE domain RL_RS24120 PF00005 ABC transporter RL_RS24135 PF02590 Predicted SPOUT methyltransferase RL_RS24145 PF03572 Peptidase family S41 RL_RS24145 PF13180 PDZ domain RL_RS24155 PF00293 NUDIX domain RL_RS24160 PF00210 Ferritin-like domain RL_RS24170 PF14579 Helix-hairpin-helix motif RL_RS24170 PF02811 PHP domain RL_RS24170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RL_RS24170 PF07733 Bacterial DNA polymerase III alpha NTPase domain RL_RS24170 PF01336 OB-fold nucleic acid binding domain RL_RS24195 PF03328 HpcH/HpaI aldolase/citrate lyase family RL_RS24210 PF00694 Aconitase C-terminal domain RL_RS24215 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS24220 PF00180 Isocitrate/isopropylmalate dehydrogenase RL_RS24225 PF01569 PAP2 superfamily RL_RS24230 PF00083 Sugar (and other) transporter RL_RS24240 PF00005 ABC transporter RL_RS24250 PF00245 Alkaline phosphatase RL_RS24260 PF01118 Semialdehyde dehydrogenase, NAD binding domain RL_RS24260 PF02774 Semialdehyde dehydrogenase, dimerisation domain RL_RS24270 PF00990 Diguanylate cyclase, GGDEF domain RL_RS24270 PF17151 Periplasmic sensor domain RL_RS24275 PF00484 Carbonic anhydrase RL_RS24280 PF08543 Phosphomethylpyrimidine kinase RL_RS24285 PF05088 Bacterial NAD-glutamate dehydrogenase RL_RS24290 PF11700 Vacuole effluxer Atg22 like RL_RS24295 PF01808 AICARFT/IMPCHase bienzyme RL_RS24295 PF02142 MGS-like domain RL_RS24300 PF07940 Heparinase II/III-like protein RL_RS24305 PF01029 NusB family RL_RS24305 PF01189 16S rRNA methyltransferase RsmB/F RL_RS24310 PF01435 Peptidase family M48 RL_RS24320 PF00501 AMP-binding enzyme RL_RS24320 PF13193 AMP-binding enzyme C-terminal domain RL_RS24320 PF16177 Acetyl-coenzyme A synthetase N-terminus RL_RS24330 PF00700 Bacterial flagellin C-terminal helical region RL_RS24330 PF00669 Bacterial flagellin N-terminal helical region RL_RS24335 PF16177 Acetyl-coenzyme A synthetase N-terminus RL_RS24335 PF13193 AMP-binding enzyme C-terminal domain RL_RS24335 PF00501 AMP-binding enzyme RL_RS24340 PF01168 Alanine racemase, N-terminal domain RL_RS24345 PF08264 Anticodon-binding domain of tRNA RL_RS24345 PF13603 Leucyl-tRNA synthetase, Domain 2 RL_RS24345 PF00133 tRNA synthetases class I (I, L, M and V) RL_RS24360 PF17762 HTH domain found in ParB protein RL_RS24360 PF02195 ParB-like nuclease domain RL_RS24365 PF13614 AAA domain RL_RS24370 PF02527 rRNA small subunit methyltransferase G RL_RS24375 PF13932 GidA associated domain RL_RS24375 PF01134 Glucose inhibited division protein A RL_RS24380 PF10396 GTP-binding protein TrmE N-terminus RL_RS24380 PF12631 MnmE helical domain RL_RS24380 PF01926 50S ribosome-binding GTPase RL_RS24385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RL_RS24385 PF07498 Rho termination factor, N-terminal domain RL_RS24385 PF07497 Rho termination factor, RNA-binding domain RL_RS24390 PF03653 Uncharacterised protein family (UPF0093) RL_RS24395 PF01208 Uroporphyrinogen decarboxylase (URO-D) RL_RS24435 PF00204 DNA gyrase B RL_RS24435 PF01751 Toprim domain RL_RS24435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS24435 PF00986 DNA gyrase B subunit, carboxyl terminus RL_RS24575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS24575 PF13756 Stimulus-sensing domain RL_RS24575 PF00672 HAMP domain RL_RS24575 PF00512 His Kinase A (phospho-acceptor) domain RL_RS24575 PF13755 Sensor N-terminal transmembrane domain RL_RS24655 PF01274 Malate synthase RL_RS24660 PF01274 Malate synthase RL_RS24805 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS24805 PF09364 XFP N-terminal domain RL_RS24805 PF09363 XFP C-terminal domain RL_RS25085 PF00575 S1 RNA binding domain RL_RS25150 PF02801 Beta-ketoacyl synthase, C-terminal domain RL_RS25150 PF00109 Beta-ketoacyl synthase, N-terminal domain RL_RS25200 PF01751 Toprim domain RL_RS25200 PF00204 DNA gyrase B RL_RS25200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS25200 PF00986 DNA gyrase B subunit, carboxyl terminus RL_RS25240 PF00291 Pyridoxal-phosphate dependent enzyme RL_RS25260 PF01039 Carboxyl transferase domain RL_RS25425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS25425 PF00512 His Kinase A (phospho-acceptor) domain RL_RS25550 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS25550 PF09363 XFP C-terminal domain RL_RS25550 PF09364 XFP N-terminal domain RL_RS25765 PF08125 Mannitol dehydrogenase C-terminal domain RL_RS25765 PF01232 Mannitol dehydrogenase Rossmann domain RL_RS25815 PF02224 Cytidylate kinase RL_RS25980 PF01039 Carboxyl transferase domain RL_RS25995 PF12705 PD-(D/E)XK nuclease superfamily RL_RS25995 PF00580 UvrD/REP helicase N-terminal domain RL_RS25995 PF13361 UvrD-like helicase C-terminal domain RL_RS26000 PF13361 UvrD-like helicase C-terminal domain RL_RS26000 PF00580 UvrD/REP helicase N-terminal domain RL_RS26170 PF00270 DEAD/DEAH box helicase RL_RS26170 PF04408 Helicase associated domain (HA2) RL_RS26170 PF00271 Helicase conserved C-terminal domain RL_RS26170 PF08482 ATP-dependent helicase C-terminal RL_RS26290 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS26290 PF09364 XFP N-terminal domain RL_RS26290 PF09363 XFP C-terminal domain RL_RS26335 PF00005 ABC transporter RL_RS26335 PF00664 ABC transporter transmembrane region RL_RS26710 PF00476 DNA polymerase family A RL_RS26710 PF01612 3'-5' exonuclease RL_RS26710 PF01367 5'-3' exonuclease, C-terminal SAM fold RL_RS26710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RL_RS26725 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RL_RS26725 PF09397 Ftsk gamma domain RL_RS26725 PF17854 FtsK alpha domain RL_RS26725 PF01580 FtsK/SpoIIIE family RL_RS26735 PF00625 Guanylate kinase RL_RS26775 PF00005 ABC transporter RL_RS26815 PF00005 ABC transporter RL_RS26815 PF00664 ABC transporter transmembrane region RL_RS26955 PF01676 Metalloenzyme superfamily RL_RS27410 PF07690 Major Facilitator Superfamily RL_RS27660 PF01274 Malate synthase RL_RS28040 PF00171 Aldehyde dehydrogenase family RL_RS28080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RL_RS28130 PF05175 Methyltransferase small domain RL_RS28130 PF08468 Methyltransferase small domain N-terminal RL_RS28140 PF00561 alpha/beta hydrolase fold RL_RS28185 PF13406 Transglycosylase SLT domain RL_RS28320 PF00563 EAL domain RL_RS28320 PF13188 PAS domain RL_RS28320 PF03707 Bacterial signalling protein N terminal repeat RL_RS28320 PF00990 Diguanylate cyclase, GGDEF domain RL_RS28530 PF00005 ABC transporter RL_RS28565 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RL_RS28565 PF02885 Glycosyl transferase family, helical bundle domain RL_RS28565 PF00591 Glycosyl transferase family, a/b domain RL_RS28585 PF00962 Adenosine/AMP deaminase RL_RS28590 PF01676 Metalloenzyme superfamily RL_RS28615 PF00263 Bacterial type II and III secretion system protein RL_RS28615 PF04972 BON domain RL_RS28615 PF13629 Pilus formation protein N terminal region RL_RS28635 PF00437 Type II/IV secretion system protein RL_RS28675 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain RL_RS28675 PF00877 NlpC/P60 family RL_RS29065 PF00107 Zinc-binding dehydrogenase RL_RS29065 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS29070 PF00107 Zinc-binding dehydrogenase RL_RS29070 PF08240 Alcohol dehydrogenase GroES-like domain RL_RS29650 PF00294 pfkB family carbohydrate kinase RL_RS29980 PF01274 Malate synthase RL_RS30005 PF08482 ATP-dependent helicase C-terminal RL_RS30005 PF04408 Helicase associated domain (HA2) RL_RS30005 PF00270 DEAD/DEAH box helicase RL_RS30005 PF00271 Helicase conserved C-terminal domain RL_RS30080 PF06165 Glycosyltransferase family 36 RL_RS30080 PF10091 Putative glucoamylase RL_RS30080 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain RL_RS30310 PF08125 Mannitol dehydrogenase C-terminal domain RL_RS30310 PF01232 Mannitol dehydrogenase Rossmann domain RL_RS30365 PF00575 S1 RNA binding domain RL_RS30470 PF00009 Elongation factor Tu GTP binding domain RL_RS30470 PF11987 Translation-initiation factor 2 RL_RS30470 PF08364 Bacterial translation initiation factor IF-2 associated region RL_RS30470 PF04760 Translation initiation factor IF-2, N-terminal region RL_RS30475 PF08364 Bacterial translation initiation factor IF-2 associated region RL_RS30475 PF00009 Elongation factor Tu GTP binding domain RL_RS30475 PF04760 Translation initiation factor IF-2, N-terminal region RL_RS30475 PF11987 Translation-initiation factor 2 RL_RS30660 PF01367 5'-3' exonuclease, C-terminal SAM fold RL_RS30660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RL_RS30660 PF01612 3'-5' exonuclease RL_RS30660 PF00476 DNA polymerase family A RL_RS30665 PF01367 5'-3' exonuclease, C-terminal SAM fold RL_RS30665 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RL_RS30665 PF01612 3'-5' exonuclease RL_RS30665 PF00476 DNA polymerase family A RL_RS30740 PF00005 ABC transporter RL_RS30800 PF00664 ABC transporter transmembrane region RL_RS30800 PF00005 ABC transporter RL_RS30895 PF02885 Glycosyl transferase family, helical bundle domain RL_RS30895 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RL_RS30895 PF00591 Glycosyl transferase family, a/b domain RL_RS31025 PF01757 Acyltransferase family RL_RS31290 PF00248 Aldo/keto reductase family RL_RS31710 PF01156 Inosine-uridine preferring nucleoside hydrolase RL_RS31845 PF00072 Response regulator receiver domain RL_RS31845 PF00512 His Kinase A (phospho-acceptor) domain RL_RS31845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS31845 PF09456 RcsC Alpha-Beta-Loop (ABL) RL_RS31850 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) RL_RS31850 PF00672 HAMP domain RL_RS31850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS31850 PF01627 Hpt domain RL_RS31850 PF00072 Response regulator receiver domain RL_RS31850 PF00512 His Kinase A (phospho-acceptor) domain RL_RS31905 PF04552 Sigma-54, DNA binding domain RL_RS31905 PF00309 Sigma-54 factor, Activator interacting domain (AID) RL_RS31905 PF04963 Sigma-54 factor, core binding domain RL_RS31930 PF00672 HAMP domain RL_RS31930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RL_RS32275 PF00294 pfkB family carbohydrate kinase RL_RS32790 PF00155 Aminotransferase class I and II RL_RS32880 PF00005 ABC transporter RL_RS32880 PF00664 ABC transporter transmembrane region RL_RS32990 PF00204 DNA gyrase B RL_RS32990 PF01751 Toprim domain RL_RS32990 PF00986 DNA gyrase B subunit, carboxyl terminus RL_RS32990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RL_RS33000 PF13409 Glutathione S-transferase, N-terminal domain RL_RS33365 PF09363 XFP C-terminal domain RL_RS33365 PF09364 XFP N-terminal domain RL_RS33365 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS33370 PF09363 XFP C-terminal domain RL_RS33370 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase RL_RS33370 PF09364 XFP N-terminal domain RL_RS33420 PF00664 ABC transporter transmembrane region RL_RS33420 PF00005 ABC transporter RL_RS33605 PF00575 S1 RNA binding domain RL_RS33610 PF00575 S1 RNA binding domain RL_RS33740 PF13406 Transglycosylase SLT domain RL_RS33875 PF13491 4TM region of DNA translocase FtsK/SpoIIIE RL_RS33875 PF09397 Ftsk gamma domain RL_RS33875 PF01580 FtsK/SpoIIIE family RL_RS33875 PF17854 FtsK alpha domain RL_RS33985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RL_RS34190 PF03576 Peptidase family S58 RL_RS34365 PF01588 Putative tRNA binding domain RL_RS34365 PF03483 B3/4 domain RL_RS34365 PF03147 Ferredoxin-fold anticodon binding domain RL_RS34365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RL_RS34365 PF03484 tRNA synthetase B5 domain RL_RS34685 PF00009 Elongation factor Tu GTP binding domain RL_RS34685 PF03144 Elongation factor Tu domain 2 RL_RS34685 PF16658 Class II release factor RF3, C-terminal domain RL_RS34765 PF07690 Major Facilitator Superfamily RL_RS34880 PF03471 Transporter associated domain RL_RS34880 PF00571 CBS domain RL_RS35190 PF02096 60Kd inner membrane protein RL_RS35190 PF14849 YidC periplasmic domain RL_RS35340 PF13407 Periplasmic binding protein domain RL_RS35400 PF00982 Glycosyltransferase family 20 RL_RS35410 PF00342 Phosphoglucose isomerase RL_RS35490 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RL_RS35660 PF01053 Cys/Met metabolism PLP-dependent enzyme RL_RS36420 PF02119 Flagellar P-ring protein RL_RS36540 PF01547 Bacterial extracellular solute-binding protein RL_RS36560 PF00528 Binding-protein-dependent transport system inner membrane component RL_RS36670 PF13416 Bacterial extracellular solute-binding protein RL_RS36905 PF13195 Protein of unknown function (DUF4011) RL_RS36905 PF13087 AAA domain RL_RS36905 PF13195 Protein of unknown function (DUF4011) RL_RS36905 PF13086 AAA domain RL_RS36905 PF13087 AAA domain RL_RS36905 PF13086 AAA domain RL_RS36940 PF03869 Arc-like DNA binding domain RL_RS36970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RL_RS36970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain