RL_RS00025 SM00479 RL_RS00025 RL_RS00040 SM00978 RL_RS00040 RL_RS00045 SM00925 MltA specific insert domain RL_RS00050 SM00463 Small MutS-related domain RL_RS00055 SM00530 Helix-turn-helix XRE-family like proteins RL_RS00060 SM00387 Histidine kinase-like ATPases RL_RS00060 SM00433 TopoisomeraseII RL_RS00150 SM00091 PAS domain RL_RS00150 SM00387 Histidine kinase-like ATPases RL_RS00150 SM00388 His Kinase A (phosphoacceptor) domain RL_RS00155 SM00996 S-adenosyl-L-homocysteine hydrolase RL_RS00155 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RL_RS00175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS00175 SM00387 Histidine kinase-like ATPases RL_RS00175 SM00388 His Kinase A (phosphoacceptor) domain RL_RS00180 SM00448 cheY-homologous receiver domain RL_RS00180 SM00862 Transcriptional regulatory protein, C terminal RL_RS00250 SM01006 Siderophore biosynthesis protein domain RL_RS00255 SM00382 ATPases associated with a variety of cellular activities RL_RS00255 SM01086 C-terminal, D2-small domain, of ClpB protein RL_RS00285 SM00448 cheY-homologous receiver domain RL_RS00290 SM00387 Histidine kinase-like ATPases RL_RS00290 SM00388 His Kinase A (phosphoacceptor) domain RL_RS00295 SM00487 DEAD-like helicases superfamily RL_RS00295 SM00490 helicase superfamily c-terminal domain RL_RS00295 SM00847 Helicase associated domain (HA2) Add an annotation RL_RS00335 SM00642 Alpha-amylase domain RL_RS00360 SM01068 Putative carbohydrate binding domain RL_RS00370 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS00380 SM00028 Tetratricopeptide repeats RL_RS00395 SM00382 ATPases associated with a variety of cellular activities RL_RS00410 SM00421 helix_turn_helix, Lux Regulon RL_RS00450 SM00354 helix_turn _helix lactose operon repressor RL_RS00510 SM00382 ATPases associated with a variety of cellular activities RL_RS00550 SM00422 helix_turn_helix, mercury resistance RL_RS00550 SM00530 Helix-turn-helix XRE-family like proteins RL_RS00555 SM00474 3'-5' exonuclease RL_RS00565 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS00630 SM00825 Beta-ketoacyl synthase RL_RS00645 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS00645 SM00322 K homology RNA-binding domain RL_RS00650 SM01387 RL_RS00650 RL_RS00680 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS00680 SM00322 K homology RNA-binding domain RL_RS00705 SM00493 RL_RS00705 RL_RS00720 SM00382 ATPases associated with a variety of cellular activities RL_RS00775 SM00287 Bacterial SH3 domain homologues RL_RS00795 SM00382 ATPases associated with a variety of cellular activities RL_RS00800 SM00530 Helix-turn-helix XRE-family like proteins RL_RS00810 SM00271 DnaJ molecular chaperone homology domain RL_RS00830 SM00287 Bacterial SH3 domain homologues RL_RS00840 SM00052 Putative diguanylate phosphodiesterase RL_RS00840 SM00267 diguanylate cyclase RL_RS00845 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS00850 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RL_RS00850 SM00474 3'-5' exonuclease RL_RS00850 SM00475 5'-3' exonuclease RL_RS00850 SM00479 RL_RS00850 RL_RS00850 SM00482 DNA polymerase A domain RL_RS00855 SM00843 RL_RS00855 RL_RS00865 SM00072 Guanylate kinase homologues. RL_RS00900 SM00382 ATPases associated with a variety of cellular activities RL_RS00910 SM00382 ATPases associated with a variety of cellular activities RL_RS00915 SM00382 ATPases associated with a variety of cellular activities RL_RS00940 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS00940 SM00866 RL_RS00940 RL_RS00945 SM00855 Phosphoglycerate mutase family RL_RS00955 SM00382 ATPases associated with a variety of cellular activities RL_RS00965 SM00851 MGS-like domain RL_RS00990 SM00382 ATPases associated with a variety of cellular activities RL_RS01025 SM00344 helix_turn_helix ASNC type RL_RS01045 SM00382 ATPases associated with a variety of cellular activities RL_RS01070 SM01133 RL_RS01070 RL_RS01075 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RL_RS01125 SM00858 RL_RS01125 RL_RS01175 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS01325 SM01266 RL_RS01325 RL_RS01345 SM00530 Helix-turn-helix XRE-family like proteins RL_RS01415 SM00873 B3/4 domain RL_RS01415 SM00874 tRNA synthetase B5 domain RL_RS01415 SM00896 Ferredoxin-fold anticodon binding domain RL_RS01490 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS01510 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS01540 SM00822 RL_RS01540 RL_RS01555 SM00966 SpoVT / AbrB like domain RL_RS01575 SM00342 helix_turn_helix, arabinose operon control protein RL_RS01575 SM00871 Bacterial transcription activator, effector binding domain RL_RS01580 SM00342 helix_turn_helix, arabinose operon control protein RL_RS01610 SM00382 ATPases associated with a variety of cellular activities RL_RS01610 SM00862 Transcriptional regulatory protein, C terminal RL_RS01620 SM00829 Enoylreductase RL_RS01730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RL_RS01745 SM00480 DNA polymerase III beta subunit RL_RS01770 SM00382 ATPases associated with a variety of cellular activities RL_RS01795 SM00344 helix_turn_helix ASNC type RL_RS01830 SM00344 helix_turn_helix ASNC type RL_RS01850 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS01850 SM00895 RL_RS01850 RL_RS01870 SM00822 RL_RS01870 RL_RS01940 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RL_RS01940 SM01232 RL_RS01940 RL_RS01955 SM00382 ATPases associated with a variety of cellular activities RL_RS01955 SM00760 Bacterial dnaA protein helix-turn-helix domain RL_RS01965 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS02030 SM00530 Helix-turn-helix XRE-family like proteins RL_RS02040 SM01091 Transporter associated domain RL_RS02055 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS02060 SM00563 Phosphate acyltransferases RL_RS02080 SM00932 Scaffold protein Nfu/NifU N terminal RL_RS02110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RL_RS02120 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RL_RS02120 SM00534 ATPase domain of DNA mismatch repair MUTS family RL_RS02125 SM00919 Malic enzyme, NAD binding domain RL_RS02125 SM01274 RL_RS02125 RL_RS02135 SM00387 Histidine kinase-like ATPases RL_RS02135 SM00388 His Kinase A (phosphoacceptor) domain RL_RS02135 SM00448 cheY-homologous receiver domain RL_RS02145 SM00967 RNA 2'-O ribose methyltransferase substrate binding RL_RS02175 SM00411 bacterial (prokaryotic) histone like domain RL_RS02195 SM00382 ATPases associated with a variety of cellular activities RL_RS02220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS02220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS02235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS02285 SM00054 EF-hand, calcium binding motif RL_RS02295 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS02300 SM00342 helix_turn_helix, arabinose operon control protein RL_RS02330 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. RL_RS02335 SM00387 Histidine kinase-like ATPases RL_RS02335 SM00911 HWE histidine kinase RL_RS02350 SM00357 Cold shock protein domain RL_RS02375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS02375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS02380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS02380 SM00387 Histidine kinase-like ATPases RL_RS02400 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS02540 SM00052 Putative diguanylate phosphodiesterase RL_RS02540 SM00267 diguanylate cyclase RL_RS02570 SM00382 ATPases associated with a variety of cellular activities RL_RS02585 SM00267 diguanylate cyclase RL_RS02665 SM00382 ATPases associated with a variety of cellular activities RL_RS02690 SM00829 Enoylreductase RL_RS02700 SM00382 ATPases associated with a variety of cellular activities RL_RS02720 SM00858 RL_RS02720 RL_RS02725 SM00895 RL_RS02725 RL_RS02735 SM00382 ATPases associated with a variety of cellular activities RL_RS02740 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS02835 SM00387 Histidine kinase-like ATPases RL_RS02835 SM00388 His Kinase A (phosphoacceptor) domain RL_RS02865 SM00382 ATPases associated with a variety of cellular activities RL_RS02875 SM00448 cheY-homologous receiver domain RL_RS02875 SM00862 Transcriptional regulatory protein, C terminal RL_RS02950 SM00342 helix_turn_helix, arabinose operon control protein RL_RS02965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS02965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS02970 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS02990 SM00421 helix_turn_helix, Lux Regulon RL_RS02990 SM00448 cheY-homologous receiver domain RL_RS03025 SM00028 Tetratricopeptide repeats RL_RS03055 SM00487 DEAD-like helicases superfamily RL_RS03055 SM00490 helicase superfamily c-terminal domain RL_RS03085 SM00671 Sel1-like repeats. RL_RS03120 SM00357 Cold shock protein domain RL_RS03125 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS03150 SM00387 Histidine kinase-like ATPases RL_RS03150 SM00388 His Kinase A (phosphoacceptor) domain RL_RS03150 SM00448 cheY-homologous receiver domain RL_RS03170 SM00052 Putative diguanylate phosphodiesterase RL_RS03170 SM00267 diguanylate cyclase RL_RS03235 SM00226 Low molecular weight phosphatase family RL_RS03265 SM00530 Helix-turn-helix XRE-family like proteins RL_RS03280 SM00382 ATPases associated with a variety of cellular activities RL_RS03305 SM00421 helix_turn_helix, Lux Regulon RL_RS03315 SM00342 helix_turn_helix, arabinose operon control protein RL_RS03325 SM00382 ATPases associated with a variety of cellular activities RL_RS03345 SM00822 RL_RS03345 RL_RS03350 SM00382 ATPases associated with a variety of cellular activities RL_RS03405 SM01133 RL_RS03405 RL_RS03425 SM00822 RL_RS03425 RL_RS03430 SM00829 Enoylreductase RL_RS03435 SM00354 helix_turn _helix lactose operon repressor RL_RS03470 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS03495 SM00710 Parallel beta-helix repeats RL_RS03545 SM00387 Histidine kinase-like ATPases RL_RS03545 SM00388 His Kinase A (phosphoacceptor) domain RL_RS03545 SM00448 cheY-homologous receiver domain RL_RS03550 SM00448 cheY-homologous receiver domain RL_RS03555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RL_RS03555 SM00091 PAS domain RL_RS03555 SM00387 Histidine kinase-like ATPases RL_RS03555 SM00388 His Kinase A (phosphoacceptor) domain RL_RS03560 SM00448 cheY-homologous receiver domain RL_RS03565 SM00421 helix_turn_helix, Lux Regulon RL_RS03575 SM00387 Histidine kinase-like ATPases RL_RS03575 SM00388 His Kinase A (phosphoacceptor) domain RL_RS03605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS03615 SM00448 cheY-homologous receiver domain RL_RS03620 SM00073 Histidine Phosphotransfer domain RL_RS03620 SM00260 Two component signalling adaptor domain RL_RS03620 SM00387 Histidine kinase-like ATPases RL_RS03620 SM01231 RL_RS03620 RL_RS03625 SM00260 Two component signalling adaptor domain RL_RS03630 SM00138 Methyltransferase, chemotaxis proteins RL_RS03635 SM00448 cheY-homologous receiver domain RL_RS03640 SM00448 cheY-homologous receiver domain RL_RS03660 SM00421 helix_turn_helix, Lux Regulon RL_RS03665 SM00421 helix_turn_helix, Lux Regulon RL_RS03705 SM00382 ATPases associated with a variety of cellular activities RL_RS03815 SM00862 Transcriptional regulatory protein, C terminal RL_RS03900 SM00354 helix_turn _helix lactose operon repressor RL_RS03920 SM00642 Alpha-amylase domain RL_RS03925 SM00382 ATPases associated with a variety of cellular activities RL_RS03955 SM01230 RL_RS03955 RL_RS03965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS03965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS03970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS03970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS03995 SM00530 Helix-turn-helix XRE-family like proteins RL_RS04005 SM00382 ATPases associated with a variety of cellular activities RL_RS04030 SM00091 PAS domain RL_RS04030 SM00387 Histidine kinase-like ATPases RL_RS04030 SM00388 His Kinase A (phosphoacceptor) domain RL_RS04045 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain RL_RS04095 SM00382 ATPases associated with a variety of cellular activities RL_RS04100 SM00382 ATPases associated with a variety of cellular activities RL_RS04125 SM00028 Tetratricopeptide repeats RL_RS04370 SM00857 Resolvase, N terminal domain RL_RS04425 SM00849 Metallo-beta-lactamase superfamily RL_RS04430 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS04430 SM01240 RL_RS04430 RL_RS04495 SM00996 S-adenosyl-L-homocysteine hydrolase RL_RS04495 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RL_RS04500 SM00829 Enoylreductase RL_RS04625 SM00883 Chaperonin 10 Kd subunit RL_RS04635 SM00904 Riboflavin kinase RL_RS04665 SM00363 S4 RNA-binding domain RL_RS04730 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS04730 SM00895 RL_RS04730 RL_RS04740 SM00382 ATPases associated with a variety of cellular activities RL_RS04755 SM00853 MutL C terminal dimerisation domain RL_RS04755 SM01340 RL_RS04755 RL_RS04760 SM00091 PAS domain RL_RS04760 SM00448 cheY-homologous receiver domain RL_RS04765 SM00052 Putative diguanylate phosphodiesterase RL_RS04765 SM00267 diguanylate cyclase RL_RS04790 SM00822 RL_RS04790 RL_RS04795 SM00346 helix_turn_helix isocitrate lyase regulation RL_RS04800 SM00421 helix_turn_helix, Lux Regulon RL_RS04855 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS04870 SM00852 Probable molybdopterin binding domain RL_RS04880 SM00028 Tetratricopeptide repeats RL_RS04935 SM01209 RL_RS04935 RL_RS04935 SM01210 RL_RS04935 RL_RS04945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS04945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS04945 SM01049 RL_RS04945 RL_RS04960 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS04960 SM00732 Likely ribonuclease with RNase H fold. RL_RS04970 SM00855 Phosphoglycerate mutase family RL_RS05050 SM00363 S4 RNA-binding domain RL_RS05060 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS05060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS05065 SM00861 Transketolase, pyrimidine binding domain RL_RS05095 SM00903 Flavin reductase like domain RL_RS05120 SM00382 ATPases associated with a variety of cellular activities RL_RS05125 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS05140 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS05140 SM00895 RL_RS05140 RL_RS05145 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS05145 SM00895 RL_RS05145 RL_RS05175 SM01329 RL_RS05175 RL_RS05195 SM00091 PAS domain RL_RS05195 SM00387 Histidine kinase-like ATPases RL_RS05195 SM00388 His Kinase A (phosphoacceptor) domain RL_RS05220 SM00382 ATPases associated with a variety of cellular activities RL_RS05240 SM00052 Putative diguanylate phosphodiesterase RL_RS05240 SM00267 diguanylate cyclase RL_RS05240 SM01079 RL_RS05240 RL_RS05250 SM00855 Phosphoglycerate mutase family RL_RS05260 SM00271 DnaJ molecular chaperone homology domain RL_RS05415 SM00382 ATPases associated with a variety of cellular activities RL_RS05420 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS05435 SM00382 ATPases associated with a variety of cellular activities RL_RS05450 SM00886 Stress responsive A/B Barrel Domain RL_RS05490 SM00836 DALR anticodon binding domain RL_RS05490 SM01016 Arginyl tRNA synthetase N terminal dom RL_RS05495 SM00052 Putative diguanylate phosphodiesterase RL_RS05495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RL_RS05495 SM00267 diguanylate cyclase RL_RS05525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS05525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS05550 SM00869 Autotransporter beta-domain RL_RS05565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS05595 SM00478 endonuclease III RL_RS05675 SM00849 Metallo-beta-lactamase superfamily RL_RS05715 SM00487 DEAD-like helicases superfamily RL_RS05715 SM00490 helicase superfamily c-terminal domain RL_RS05755 SM00563 Phosphate acyltransferases RL_RS05785 SM00421 helix_turn_helix, Lux Regulon RL_RS05850 SM00421 helix_turn_helix, Lux Regulon RL_RS05880 SM00028 Tetratricopeptide repeats RL_RS05915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS05920 SM00849 Metallo-beta-lactamase superfamily RL_RS05960 SM00862 Transcriptional regulatory protein, C terminal RL_RS06025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS06025 SM00387 Histidine kinase-like ATPases RL_RS06025 SM00388 His Kinase A (phosphoacceptor) domain RL_RS06030 SM00448 cheY-homologous receiver domain RL_RS06030 SM00862 Transcriptional regulatory protein, C terminal RL_RS06050 SM01007 Class II Aldolase and Adducin N-terminal domain RL_RS06055 SM00448 cheY-homologous receiver domain RL_RS06060 SM00387 Histidine kinase-like ATPases RL_RS06085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS06180 SM00028 Tetratricopeptide repeats RL_RS06195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS06205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS06225 SM00869 Autotransporter beta-domain RL_RS06250 SM00862 Transcriptional regulatory protein, C terminal RL_RS06260 SM00849 Metallo-beta-lactamase superfamily RL_RS06315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS06340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS06350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS06365 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS06405 SM00822 RL_RS06405 RL_RS06410 SM00342 helix_turn_helix, arabinose operon control protein RL_RS06530 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS06535 SM00354 helix_turn _helix lactose operon repressor RL_RS06560 SM00829 Enoylreductase RL_RS06595 SM00822 RL_RS06595 RL_RS06650 SM00052 Putative diguanylate phosphodiesterase RL_RS06650 SM00267 diguanylate cyclase RL_RS06655 SM00829 Enoylreductase RL_RS06685 SM00420 helix_turn_helix, Deoxyribose operon repressor RL_RS06685 SM01134 RL_RS06685 RL_RS06720 SM00710 Parallel beta-helix repeats RL_RS06725 SM00052 Putative diguanylate phosphodiesterase RL_RS06725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RL_RS06725 SM00091 PAS domain RL_RS06725 SM00267 diguanylate cyclase RL_RS06765 SM00357 Cold shock protein domain RL_RS06785 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS06795 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS06820 SM00382 ATPases associated with a variety of cellular activities RL_RS06835 SM00382 ATPases associated with a variety of cellular activities RL_RS06870 SM01091 Transporter associated domain RL_RS06875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS06875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS06910 SM00829 Enoylreductase RL_RS06940 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS06995 SM00342 helix_turn_helix, arabinose operon control protein RL_RS07000 SM00822 RL_RS07000 RL_RS07055 SM00564 beta-propeller repeat RL_RS07200 SM00387 Histidine kinase-like ATPases RL_RS07200 SM00388 His Kinase A (phosphoacceptor) domain RL_RS07210 SM00342 helix_turn_helix, arabinose operon control protein RL_RS07220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS07315 SM00460 Transglutaminase/protease-like homologues RL_RS07340 SM00883 Chaperonin 10 Kd subunit RL_RS07370 SM00354 helix_turn _helix lactose operon repressor RL_RS07375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS07380 SM00342 helix_turn_helix, arabinose operon control protein RL_RS07390 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS07430 SM00886 Stress responsive A/B Barrel Domain RL_RS07445 SM00448 cheY-homologous receiver domain RL_RS07445 SM00862 Transcriptional regulatory protein, C terminal RL_RS07450 SM00387 Histidine kinase-like ATPases RL_RS07450 SM00388 His Kinase A (phosphoacceptor) domain RL_RS07480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS07485 SM00448 cheY-homologous receiver domain RL_RS07485 SM00862 Transcriptional regulatory protein, C terminal RL_RS07490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS07490 SM00387 Histidine kinase-like ATPases RL_RS07490 SM00388 His Kinase A (phosphoacceptor) domain RL_RS07505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RL_RS07505 SM00387 Histidine kinase-like ATPases RL_RS07505 SM00388 His Kinase A (phosphoacceptor) domain RL_RS07535 SM00986 Uracil DNA glycosylase superfamily RL_RS07535 SM00987 UreE urease accessory protein, C-terminal domain RL_RS07580 SM00344 helix_turn_helix ASNC type RL_RS07585 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS07585 SM00924 MgtE intracellular N domain RL_RS07590 SM00829 Enoylreductase RL_RS07605 SM00046 Diacylglycerol kinase catalytic domain (presumed) RL_RS07610 SM01230 RL_RS07610 RL_RS07740 SM00342 helix_turn_helix, arabinose operon control protein RL_RS07805 SM01130 RL_RS07805 RL_RS07820 SM01409 RL_RS07820 RL_RS07825 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RL_RS07825 SM00954 Region found in RelA / SpoT proteins RL_RS07845 SM00358 Double-stranded RNA binding motif RL_RS07845 SM00535 Ribonuclease III family RL_RS07855 SM00419 helix_turn_helix, cAMP Regulatory protein RL_RS07860 SM00448 cheY-homologous receiver domain RL_RS07880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RL_RS07885 SM00052 Putative diguanylate phosphodiesterase RL_RS07885 SM00267 diguanylate cyclase RL_RS07960 SM00382 ATPases associated with a variety of cellular activities RL_RS07980 SM00917 LeuA allosteric (dimerisation) domain RL_RS08010 SM00641 Glycosyl hydrolases family 25 RL_RS08030 SM00382 ATPases associated with a variety of cellular activities RL_RS08040 SM01005 Alanine racemase, C-terminal domain RL_RS08045 SM00382 ATPases associated with a variety of cellular activities RL_RS08075 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RL_RS08080 SM00822 RL_RS08080 RL_RS08085 SM00823 Phosphopantetheine attachment site RL_RS08090 SM00825 Beta-ketoacyl synthase RL_RS08105 SM00072 Guanylate kinase homologues. RL_RS08110 SM00650 Ribosomal RNA adenine dimethylases RL_RS08140 SM00014 Acid phosphatase homologues RL_RS08170 SM00382 ATPases associated with a variety of cellular activities RL_RS08175 SM00267 diguanylate cyclase RL_RS08190 SM00562 RL_RS08190 RL_RS08225 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RL_RS08225 SM00465 GIY-YIG type nucleases (URI domain) RL_RS08250 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RL_RS08300 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS08305 SM00474 3'-5' exonuclease RL_RS08335 SM00434 DNA Topoisomerase IV RL_RS08350 SM00966 SpoVT / AbrB like domain RL_RS08370 SM01004 Delta-aminolevulinic acid dehydratase RL_RS08385 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS08500 SM00411 bacterial (prokaryotic) histone like domain RL_RS08505 SM00422 helix_turn_helix, mercury resistance RL_RS08510 SM00448 cheY-homologous receiver domain RL_RS08515 SM00387 Histidine kinase-like ATPases RL_RS08515 SM00388 His Kinase A (phosphoacceptor) domain RL_RS08515 SM00448 cheY-homologous receiver domain RL_RS08660 SM00859 Semialdehyde dehydrogenase, NAD binding domain RL_RS08710 SM00881 CoA binding domain RL_RS08725 SM00052 Putative diguanylate phosphodiesterase RL_RS08725 SM00267 diguanylate cyclase RL_RS08745 SM00382 ATPases associated with a variety of cellular activities RL_RS08755 SM00267 diguanylate cyclase RL_RS08765 SM00382 ATPases associated with a variety of cellular activities RL_RS08765 SM00994 ClpX C4-type zinc finger RL_RS08765 SM01086 C-terminal, D2-small domain, of ClpB protein RL_RS08770 SM00382 ATPases associated with a variety of cellular activities RL_RS08770 SM00464 Found in ATP-dependent protease La (LON) RL_RS08775 SM00411 bacterial (prokaryotic) histone like domain RL_RS08870 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RL_RS08880 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RL_RS08925 SM00849 Metallo-beta-lactamase superfamily RL_RS08950 SM00382 ATPases associated with a variety of cellular activities RL_RS08965 SM00481 DNA polymerase alpha chain like domain RL_RS08995 SM00448 cheY-homologous receiver domain RL_RS09000 SM00267 diguanylate cyclase RL_RS09000 SM00448 cheY-homologous receiver domain RL_RS09020 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS09020 SM00955 RL_RS09020 RL_RS09025 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RL_RS09025 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RL_RS09025 SM00493 RL_RS09025 RL_RS09035 SM01207 RL_RS09035 RL_RS09060 SM00646 RL_RS09060 RL_RS09070 SM00937 RL_RS09070 RL_RS09075 SM00382 ATPases associated with a variety of cellular activities RL_RS09100 SM01120 RL_RS09100 RL_RS09115 SM01120 RL_RS09115 RL_RS09145 SM00967 RNA 2'-O ribose methyltransferase substrate binding RL_RS09180 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RL_RS09180 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RL_RS09185 SM00649 Ribosomal protein L11/L12 RL_RS09210 SM00663 RNA polymerase I subunit A N-terminus RL_RS09230 SM00838 Elongation factor G C-terminus RL_RS09230 SM00889 Elongation factor G, domain IV RL_RS09240 SM01403 RL_RS09240 RL_RS09260 SM01382 RL_RS09260 RL_RS09260 SM01383 RL_RS09260 RL_RS09275 SM00322 K homology RNA-binding domain RL_RS09295 SM01374 RL_RS09295 RL_RS09300 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RL_RS09365 SM00662 RNA polymerases D RL_RS09405 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS09410 SM00382 ATPases associated with a variety of cellular activities RL_RS09430 SM01130 RL_RS09430 RL_RS09470 SM00091 PAS domain RL_RS09470 SM00387 Histidine kinase-like ATPases RL_RS09470 SM00388 His Kinase A (phosphoacceptor) domain RL_RS09480 SM00354 helix_turn _helix lactose operon repressor RL_RS09485 SM00882 Coenzyme A transferase RL_RS09515 SM00382 ATPases associated with a variety of cellular activities RL_RS09560 SM00421 helix_turn_helix, Lux Regulon RL_RS09560 SM00448 cheY-homologous receiver domain RL_RS09565 SM00387 Histidine kinase-like ATPases RL_RS09615 SM00421 helix_turn_helix, Lux Regulon RL_RS09615 SM00448 cheY-homologous receiver domain RL_RS09620 SM00382 ATPases associated with a variety of cellular activities RL_RS09620 SM00862 Transcriptional regulatory protein, C terminal RL_RS09690 SM00344 helix_turn_helix ASNC type RL_RS09695 SM00344 helix_turn_helix ASNC type RL_RS09730 SM00831 Cation transporter/ATPase, N-terminus RL_RS09775 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS09780 SM00749 bacterial OsmY and nodulation domain RL_RS09790 SM00091 PAS domain RL_RS09790 SM00387 Histidine kinase-like ATPases RL_RS09790 SM00388 His Kinase A (phosphoacceptor) domain RL_RS09790 SM00448 cheY-homologous receiver domain RL_RS09795 SM00100 Cyclic nucleotide-monophosphate binding domain RL_RS09795 SM00419 helix_turn_helix, cAMP Regulatory protein RL_RS09800 SM00448 cheY-homologous receiver domain RL_RS09800 SM00862 Transcriptional regulatory protein, C terminal RL_RS09815 SM00749 bacterial OsmY and nodulation domain RL_RS09820 SM00849 Metallo-beta-lactamase superfamily RL_RS09820 SM01027 Beta-Casp domain RL_RS09955 SM00028 Tetratricopeptide repeats RL_RS09955 SM00327 von Willebrand factor (vWF) type A domain RL_RS09960 SM00327 von Willebrand factor (vWF) type A domain RL_RS10025 SM00869 Autotransporter beta-domain RL_RS10040 SM00382 ATPases associated with a variety of cellular activities RL_RS10055 SM00901 RL_RS10055 RL_RS10130 SM00852 Probable molybdopterin binding domain RL_RS10160 SM00267 diguanylate cyclase RL_RS10170 SM00822 RL_RS10170 RL_RS10210 SM00344 helix_turn_helix ASNC type RL_RS10215 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RL_RS10215 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RL_RS10220 SM00342 helix_turn_helix, arabinose operon control protein RL_RS10230 SM00903 Flavin reductase like domain RL_RS10260 SM00450 Rhodanese Homology Domain RL_RS10265 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RL_RS10320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RL_RS10345 SM00448 cheY-homologous receiver domain RL_RS10345 SM01012 RL_RS10345 RL_RS10350 SM00354 helix_turn _helix lactose operon repressor RL_RS10360 SM00382 ATPases associated with a variety of cellular activities RL_RS10430 SM00382 ATPases associated with a variety of cellular activities RL_RS10475 SM00382 ATPases associated with a variety of cellular activities RL_RS10495 SM01060 RL_RS10495 RL_RS10575 SM00671 Sel1-like repeats. RL_RS10590 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RL_RS10595 SM00836 DALR anticodon binding domain RL_RS10595 SM01016 Arginyl tRNA synthetase N terminal dom RL_RS10650 SM00257 Lysin motif RL_RS10660 SM01323 RL_RS10660 RL_RS10715 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS10760 SM00732 Likely ribonuclease with RNase H fold. RL_RS10765 SM00849 Metallo-beta-lactamase superfamily RL_RS10805 SM00845 GatB domain RL_RS10835 SM00878 Biotin carboxylase C-terminal domain RL_RS10920 SM00357 Cold shock protein domain RL_RS10955 SM00954 Region found in RelA / SpoT proteins RL_RS11000 SM00481 DNA polymerase alpha chain like domain RL_RS11120 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen RL_RS11125 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen RL_RS11235 SM00421 helix_turn_helix, Lux Regulon RL_RS11240 SM00857 Resolvase, N terminal domain RL_RS11295 SM00382 ATPases associated with a variety of cellular activities RL_RS11305 SM00530 Helix-turn-helix XRE-family like proteins RL_RS11335 SM00382 ATPases associated with a variety of cellular activities RL_RS11410 SM00382 ATPases associated with a variety of cellular activities RL_RS11425 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS11450 SM00971 Serine acetyltransferase, N-terminal RL_RS11470 SM00382 ATPases associated with a variety of cellular activities RL_RS11470 SM01086 C-terminal, D2-small domain, of ClpB protein RL_RS11475 SM00886 Stress responsive A/B Barrel Domain RL_RS11535 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS11595 SM01192 RL_RS11595 RL_RS11595 SM01193 RL_RS11595 RL_RS11610 SM00861 Transketolase, pyrimidine binding domain RL_RS11645 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS11680 SM00387 Histidine kinase-like ATPases RL_RS11680 SM00388 His Kinase A (phosphoacceptor) domain RL_RS11685 SM00382 ATPases associated with a variety of cellular activities RL_RS11685 SM00448 cheY-homologous receiver domain RL_RS11755 SM00054 EF-hand, calcium binding motif RL_RS11785 SM00448 cheY-homologous receiver domain RL_RS11785 SM00862 Transcriptional regulatory protein, C terminal RL_RS11790 SM00387 Histidine kinase-like ATPases RL_RS11790 SM00388 His Kinase A (phosphoacceptor) domain RL_RS11800 SM00091 PAS domain RL_RS11800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS11800 SM00387 Histidine kinase-like ATPases RL_RS11800 SM00388 His Kinase A (phosphoacceptor) domain RL_RS11805 SM00382 ATPases associated with a variety of cellular activities RL_RS11805 SM00448 cheY-homologous receiver domain RL_RS11865 SM00849 Metallo-beta-lactamase superfamily RL_RS11960 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS11980 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS12020 SM00382 ATPases associated with a variety of cellular activities RL_RS12050 SM00342 helix_turn_helix, arabinose operon control protein RL_RS12055 SM01130 RL_RS12055 RL_RS12065 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS12065 SM00895 RL_RS12065 RL_RS12085 SM00382 ATPases associated with a variety of cellular activities RL_RS12090 SM00382 ATPases associated with a variety of cellular activities RL_RS12095 SM00354 helix_turn _helix lactose operon repressor RL_RS12120 SM00382 ATPases associated with a variety of cellular activities RL_RS12170 SM00822 RL_RS12170 RL_RS12175 SM00829 Enoylreductase RL_RS12205 SM00382 ATPases associated with a variety of cellular activities RL_RS12220 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS12220 SM00895 RL_RS12220 RL_RS12235 SM00829 Enoylreductase RL_RS12240 SM00382 ATPases associated with a variety of cellular activities RL_RS12265 SM00382 ATPases associated with a variety of cellular activities RL_RS12280 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS12280 SM00895 RL_RS12280 RL_RS12300 SM00487 DEAD-like helicases superfamily RL_RS12300 SM00490 helicase superfamily c-terminal domain RL_RS12310 SM00487 DEAD-like helicases superfamily RL_RS12310 SM00490 helicase superfamily c-terminal domain RL_RS12310 SM00982 RL_RS12310 RL_RS12310 SM01058 CarD-like/TRCF domain RL_RS12335 SM00992 Hemimethylated DNA-binding protein YccV like RL_RS12340 SM01230 RL_RS12340 RL_RS12345 SM00938 Nitrogen regulatory protein P-II RL_RS12385 SM00434 DNA Topoisomerase IV RL_RS12425 SM00825 Beta-ketoacyl synthase RL_RS12445 SM00642 Alpha-amylase domain RL_RS12470 SM00382 ATPases associated with a variety of cellular activities RL_RS12490 SM00354 helix_turn _helix lactose operon repressor RL_RS12505 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS12520 SM01207 RL_RS12520 RL_RS12525 SM00862 Transcriptional regulatory protein, C terminal RL_RS12590 SM00028 Tetratricopeptide repeats RL_RS12590 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS12620 SM00354 helix_turn _helix lactose operon repressor RL_RS12630 SM00382 ATPases associated with a variety of cellular activities RL_RS12685 SM00797 Allophanate hydrolase subunit 2 RL_RS12690 SM00796 Allophanate hydrolase subunit 1 RL_RS12730 SM00849 Metallo-beta-lactamase superfamily RL_RS12760 SM00936 Penicillin-binding protein 5, C-terminal domain RL_RS12780 SM00267 diguanylate cyclase RL_RS12815 SM00460 Transglutaminase/protease-like homologues RL_RS12820 SM00460 Transglutaminase/protease-like homologues RL_RS12860 SM00852 Probable molybdopterin binding domain RL_RS12880 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RL_RS12895 SM00822 RL_RS12895 RL_RS12905 SM00487 DEAD-like helicases superfamily RL_RS12905 SM00490 helicase superfamily c-terminal domain RL_RS12910 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS12910 SM01080 RL_RS12910 RL_RS12955 SM00387 Histidine kinase-like ATPases RL_RS12955 SM00433 TopoisomeraseII RL_RS12970 SM00829 Enoylreductase RL_RS13010 SM00903 Flavin reductase like domain RL_RS13025 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RL_RS13035 SM01234 RL_RS13035 RL_RS13060 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS13140 SM00422 helix_turn_helix, mercury resistance RL_RS13145 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS13145 SM00924 MgtE intracellular N domain RL_RS13185 SM00878 Biotin carboxylase C-terminal domain RL_RS13270 SM00641 Glycosyl hydrolases family 25 RL_RS13300 SM00382 ATPases associated with a variety of cellular activities RL_RS13370 SM00487 DEAD-like helicases superfamily RL_RS13370 SM00490 helicase superfamily c-terminal domain RL_RS13385 SM00903 Flavin reductase like domain RL_RS13410 SM00998 Adenylosuccinate lyase C-terminus RL_RS13435 SM00052 Putative diguanylate phosphodiesterase RL_RS13435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RL_RS13435 SM00091 PAS domain RL_RS13435 SM00267 diguanylate cyclase RL_RS13455 SM01211 RL_RS13455 RL_RS13470 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS13550 SM00363 S4 RNA-binding domain RL_RS13550 SM01390 RL_RS13550 RL_RS13555 SM00382 ATPases associated with a variety of cellular activities RL_RS13585 SM01329 RL_RS13585 RL_RS13600 SM00342 helix_turn_helix, arabinose operon control protein RL_RS13600 SM00871 Bacterial transcription activator, effector binding domain RL_RS13610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RL_RS13615 SM00382 ATPases associated with a variety of cellular activities RL_RS13630 SM00091 PAS domain RL_RS13630 SM00387 Histidine kinase-like ATPases RL_RS13630 SM00448 cheY-homologous receiver domain RL_RS13650 SM00855 Phosphoglycerate mutase family RL_RS13675 SM00905 Dihydroneopterin aldolase RL_RS13715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RL_RS13715 SM00267 diguanylate cyclase RL_RS13730 SM00382 ATPases associated with a variety of cellular activities RL_RS13740 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS13755 SM00855 Phosphoglycerate mutase family RL_RS13790 SM00919 Malic enzyme, NAD binding domain RL_RS13790 SM01274 RL_RS13790 RL_RS13805 SM00822 RL_RS13805 RL_RS13855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS13855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS13900 SM00382 ATPases associated with a variety of cellular activities RL_RS13970 SM00267 diguanylate cyclase RL_RS13985 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS14000 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS14020 SM00382 ATPases associated with a variety of cellular activities RL_RS14035 SM00861 Transketolase, pyrimidine binding domain RL_RS14055 SM00382 ATPases associated with a variety of cellular activities RL_RS14080 SM00822 RL_RS14080 RL_RS14100 SM00091 PAS domain RL_RS14100 SM00387 Histidine kinase-like ATPases RL_RS14100 SM00388 His Kinase A (phosphoacceptor) domain RL_RS14100 SM00448 cheY-homologous receiver domain RL_RS14105 SM00382 ATPases associated with a variety of cellular activities RL_RS14135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS14135 SM00387 Histidine kinase-like ATPases RL_RS14135 SM00388 His Kinase A (phosphoacceptor) domain RL_RS14140 SM00448 cheY-homologous receiver domain RL_RS14140 SM00862 Transcriptional regulatory protein, C terminal RL_RS14160 SM00420 helix_turn_helix, Deoxyribose operon repressor RL_RS14160 SM01134 RL_RS14160 RL_RS14165 SM01133 RL_RS14165 RL_RS14200 SM00382 ATPases associated with a variety of cellular activities RL_RS14210 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS14210 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RL_RS14235 SM00028 Tetratricopeptide repeats RL_RS14245 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS14275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS14280 SM00382 ATPases associated with a variety of cellular activities RL_RS14300 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS14330 SM00344 helix_turn_helix ASNC type RL_RS14335 SM00986 Uracil DNA glycosylase superfamily RL_RS14335 SM00987 UreE urease accessory protein, C-terminal domain RL_RS14340 SM00318 Staphylococcal nuclease homologues RL_RS14345 SM00387 Histidine kinase-like ATPases RL_RS14345 SM00388 His Kinase A (phosphoacceptor) domain RL_RS14385 SM00822 RL_RS14385 RL_RS14395 SM00382 ATPases associated with a variety of cellular activities RL_RS14425 SM00382 ATPases associated with a variety of cellular activities RL_RS14445 SM00354 helix_turn _helix lactose operon repressor RL_RS14495 SM01350 RL_RS14495 RL_RS14500 SM00342 helix_turn_helix, arabinose operon control protein RL_RS14525 SM00829 Enoylreductase RL_RS14530 SM00825 Beta-ketoacyl synthase RL_RS14550 SM00100 Cyclic nucleotide-monophosphate binding domain RL_RS14550 SM00419 helix_turn_helix, cAMP Regulatory protein RL_RS14605 SM00530 Helix-turn-helix XRE-family like proteins RL_RS14620 SM00833 Cobalamin synthesis protein cobW C-terminal domain RL_RS14640 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS14680 SM00382 ATPases associated with a variety of cellular activities RL_RS14685 SM00382 ATPases associated with a variety of cellular activities RL_RS14830 SM01118 RL_RS14830 RL_RS14885 SM00342 helix_turn_helix, arabinose operon control protein RL_RS14890 SM00267 diguanylate cyclase RL_RS14890 SM00448 cheY-homologous receiver domain RL_RS14895 SM00448 cheY-homologous receiver domain RL_RS14915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS14920 SM00226 Low molecular weight phosphatase family RL_RS14965 SM00387 Histidine kinase-like ATPases RL_RS14965 SM00448 cheY-homologous receiver domain RL_RS14995 SM00382 ATPases associated with a variety of cellular activities RL_RS15000 SM00382 ATPases associated with a variety of cellular activities RL_RS15005 SM01120 RL_RS15005 RL_RS15010 SM01120 RL_RS15010 RL_RS15070 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS15070 SM00895 RL_RS15070 RL_RS15110 SM00382 ATPases associated with a variety of cellular activities RL_RS15115 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS15120 SM00342 helix_turn_helix, arabinose operon control protein RL_RS15125 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS15160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS15160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS15160 SM01049 RL_RS15160 RL_RS15205 SM00342 helix_turn_helix, arabinose operon control protein RL_RS15210 SM00822 RL_RS15210 RL_RS15235 SM00448 cheY-homologous receiver domain RL_RS15250 SM00248 ankyrin repeats RL_RS15260 SM00028 Tetratricopeptide repeats RL_RS15270 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS15290 SM00487 DEAD-like helicases superfamily RL_RS15290 SM00490 helicase superfamily c-terminal domain RL_RS15310 SM00112 Cadherin repeats. RL_RS15325 SM00357 Cold shock protein domain RL_RS15335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS15365 SM00387 Histidine kinase-like ATPases RL_RS15365 SM00388 His Kinase A (phosphoacceptor) domain RL_RS15370 SM00448 cheY-homologous receiver domain RL_RS15370 SM00862 Transcriptional regulatory protein, C terminal RL_RS15380 SM00382 ATPases associated with a variety of cellular activities RL_RS15435 SM00344 helix_turn_helix ASNC type RL_RS15470 SM00382 ATPases associated with a variety of cellular activities RL_RS15485 SM00855 Phosphoglycerate mutase family RL_RS15535 SM00226 Low molecular weight phosphatase family RL_RS15615 SM00710 Parallel beta-helix repeats RL_RS15615 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses RL_RS15620 SM00710 Parallel beta-helix repeats RL_RS15620 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses RL_RS15645 SM00382 ATPases associated with a variety of cellular activities RL_RS15655 SM00342 helix_turn_helix, arabinose operon control protein RL_RS15690 SM00342 helix_turn_helix, arabinose operon control protein RL_RS15745 SM00382 ATPases associated with a variety of cellular activities RL_RS15770 SM00849 Metallo-beta-lactamase superfamily RL_RS15780 SM00342 helix_turn_helix, arabinose operon control protein RL_RS15810 SM01043 Bacterial transcriptional activator domain RL_RS15835 SM00448 cheY-homologous receiver domain RL_RS15835 SM00862 Transcriptional regulatory protein, C terminal RL_RS15840 SM00387 Histidine kinase-like ATPases RL_RS15855 SM00864 Tubulin/FtsZ family, GTPase domain RL_RS15855 SM00865 Tubulin/FtsZ family, C-terminal domain RL_RS15935 SM00052 Putative diguanylate phosphodiesterase RL_RS15935 SM00267 diguanylate cyclase RL_RS15950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS15950 SM00331 Sigma factor PP2C-like phosphatases RL_RS15965 SM00344 helix_turn_helix ASNC type RL_RS16010 SM00849 Metallo-beta-lactamase superfamily RL_RS16025 SM00382 ATPases associated with a variety of cellular activities RL_RS16065 SM00479 RL_RS16065 RL_RS16075 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS16085 SM00448 cheY-homologous receiver domain RL_RS16090 SM00387 Histidine kinase-like ATPases RL_RS16090 SM00388 His Kinase A (phosphoacceptor) domain RL_RS16150 SM00382 ATPases associated with a variety of cellular activities RL_RS16180 SM00382 ATPases associated with a variety of cellular activities RL_RS16210 SM00342 helix_turn_helix, arabinose operon control protein RL_RS16230 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS16270 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS16315 SM00028 Tetratricopeptide repeats RL_RS16320 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS16320 SM01080 RL_RS16320 RL_RS16375 SM00382 ATPases associated with a variety of cellular activities RL_RS16385 SM00833 Cobalamin synthesis protein cobW C-terminal domain RL_RS16405 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS16405 SM01091 Transporter associated domain RL_RS16415 SM00450 Rhodanese Homology Domain RL_RS16455 SM00382 ATPases associated with a variety of cellular activities RL_RS16475 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS16545 SM00342 helix_turn_helix, arabinose operon control protein RL_RS16550 SM00829 Enoylreductase RL_RS16555 SM00889 Elongation factor G, domain IV RL_RS16565 SM00344 helix_turn_helix ASNC type RL_RS16575 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS16605 SM00421 helix_turn_helix, Lux Regulon RL_RS16605 SM00422 helix_turn_helix, mercury resistance RL_RS16635 SM00100 Cyclic nucleotide-monophosphate binding domain RL_RS16645 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS16725 SM01130 RL_RS16725 RL_RS16735 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS16760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS16765 SM00244 prohibitin homologues RL_RS16770 SM00244 prohibitin homologues RL_RS16825 SM00342 helix_turn_helix, arabinose operon control protein RL_RS16870 SM00763 PrkA AAA domain RL_RS16940 SM00260 Two component signalling adaptor domain RL_RS16950 SM00479 RL_RS16950 RL_RS16960 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RL_RS16960 SM00292 breast cancer carboxy-terminal domain RL_RS16960 SM00532 Ligase N family RL_RS16985 SM00864 Tubulin/FtsZ family, GTPase domain RL_RS16985 SM00865 Tubulin/FtsZ family, C-terminal domain RL_RS16990 SM00842 Cell division protein FtsA RL_RS17095 SM00644 RL_RS17095 RL_RS17100 SM00271 DnaJ molecular chaperone homology domain RL_RS17135 SM00641 Glycosyl hydrolases family 25 RL_RS17155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS17160 SM00382 ATPases associated with a variety of cellular activities RL_RS17225 SM01230 RL_RS17225 RL_RS17260 SM00382 ATPases associated with a variety of cellular activities RL_RS17270 SM00382 ATPases associated with a variety of cellular activities RL_RS17300 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS17300 SM00866 RL_RS17300 RL_RS17305 SM01018 B12 binding domain RL_RS17325 SM00903 Flavin reductase like domain RL_RS17350 SM00382 ATPases associated with a variety of cellular activities RL_RS17355 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS17355 SM00895 RL_RS17355 RL_RS17390 SM00421 helix_turn_helix, Lux Regulon RL_RS17405 SM00448 cheY-homologous receiver domain RL_RS17475 SM00419 helix_turn_helix, cAMP Regulatory protein RL_RS17495 SM00873 B3/4 domain RL_RS17505 SM00342 helix_turn_helix, arabinose operon control protein RL_RS17540 SM00829 Enoylreductase RL_RS17555 SM00341 Helicase and RNase D C-terminal RL_RS17555 SM00487 DEAD-like helicases superfamily RL_RS17555 SM00490 helicase superfamily c-terminal domain RL_RS17555 SM00956 RL_RS17555 RL_RS17560 SM00400 zinc finger RL_RS17560 SM00493 RL_RS17560 RL_RS17575 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RL_RS17610 SM00850 LytTr DNA-binding domain RL_RS17615 SM00851 MGS-like domain RL_RS17615 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RL_RS17620 SM00986 Uracil DNA glycosylase superfamily RL_RS17620 SM00987 UreE urease accessory protein, C-terminal domain RL_RS17625 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS17645 SM00387 Histidine kinase-like ATPases RL_RS17645 SM00388 His Kinase A (phosphoacceptor) domain RL_RS17650 SM00382 ATPases associated with a variety of cellular activities RL_RS17650 SM00448 cheY-homologous receiver domain RL_RS17655 SM00344 helix_turn_helix ASNC type RL_RS17670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS17740 SM00327 von Willebrand factor (vWF) type A domain RL_RS17740 SM00609 Vault protein Inter-alpha-Trypsin domain RL_RS17765 SM00357 Cold shock protein domain RL_RS17775 SM00822 RL_RS17775 RL_RS17785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS17785 SM00387 Histidine kinase-like ATPases RL_RS17785 SM00388 His Kinase A (phosphoacceptor) domain RL_RS17790 SM00448 cheY-homologous receiver domain RL_RS17790 SM00862 Transcriptional regulatory protein, C terminal RL_RS17795 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS17810 SM00849 Metallo-beta-lactamase superfamily RL_RS17860 SM01400 RL_RS17860 RL_RS17870 SM00052 Putative diguanylate phosphodiesterase RL_RS17870 SM00267 diguanylate cyclase RL_RS17880 SM00052 Putative diguanylate phosphodiesterase RL_RS17880 SM00091 PAS domain RL_RS17880 SM00267 diguanylate cyclase RL_RS17885 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS17910 SM00966 SpoVT / AbrB like domain RL_RS17960 SM00382 ATPases associated with a variety of cellular activities RL_RS17970 SM00382 ATPases associated with a variety of cellular activities RL_RS18080 SM00829 Enoylreductase RL_RS18090 SM00917 LeuA allosteric (dimerisation) domain RL_RS18165 SM00421 helix_turn_helix, Lux Regulon RL_RS18200 SM00382 ATPases associated with a variety of cellular activities RL_RS18210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS18220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RL_RS18240 SM00642 Alpha-amylase domain RL_RS18260 SM00382 ATPases associated with a variety of cellular activities RL_RS18265 SM00382 ATPases associated with a variety of cellular activities RL_RS18280 SM01230 RL_RS18280 RL_RS18295 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS18365 SM00342 helix_turn_helix, arabinose operon control protein RL_RS18385 SM01092 CO dehydrogenase flavoprotein C-terminal domain RL_RS18390 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain RL_RS18450 SM00244 prohibitin homologues RL_RS18500 SM00091 PAS domain RL_RS18500 SM00387 Histidine kinase-like ATPases RL_RS18500 SM00388 His Kinase A (phosphoacceptor) domain RL_RS18500 SM00448 cheY-homologous receiver domain RL_RS18515 SM01130 RL_RS18515 RL_RS18520 SM00354 helix_turn _helix lactose operon repressor RL_RS18530 SM00487 DEAD-like helicases superfamily RL_RS18530 SM00490 helicase superfamily c-terminal domain RL_RS18535 SM00387 Histidine kinase-like ATPases RL_RS18540 SM00448 cheY-homologous receiver domain RL_RS18540 SM00862 Transcriptional regulatory protein, C terminal RL_RS18570 SM00382 ATPases associated with a variety of cellular activities RL_RS18575 SM00287 Bacterial SH3 domain homologues RL_RS18600 SM00460 Transglutaminase/protease-like homologues RL_RS18605 SM00448 cheY-homologous receiver domain RL_RS18605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RL_RS18630 SM00382 ATPases associated with a variety of cellular activities RL_RS18680 SM00382 ATPases associated with a variety of cellular activities RL_RS18720 SM00382 ATPases associated with a variety of cellular activities RL_RS18760 SM00530 Helix-turn-helix XRE-family like proteins RL_RS18775 SM00633 Glycosyl hydrolase family 10 RL_RS18865 SM00382 ATPases associated with a variety of cellular activities RL_RS18870 SM00710 Parallel beta-helix repeats RL_RS18870 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses RL_RS18910 SM00984 UDP binding domain RL_RS18940 SM00986 Uracil DNA glycosylase superfamily RL_RS18940 SM00987 UreE urease accessory protein, C-terminal domain RL_RS18985 SM00382 ATPases associated with a variety of cellular activities RL_RS19080 SM00382 ATPases associated with a variety of cellular activities RL_RS19105 SM00448 cheY-homologous receiver domain RL_RS19110 SM00911 HWE histidine kinase RL_RS19125 SM00342 helix_turn_helix, arabinose operon control protein RL_RS19130 SM00450 Rhodanese Homology Domain RL_RS19135 SM00829 Enoylreductase RL_RS19150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RL_RS19150 SM00448 cheY-homologous receiver domain RL_RS19150 SM00911 HWE histidine kinase RL_RS19180 SM00382 ATPases associated with a variety of cellular activities RL_RS19210 SM00100 Cyclic nucleotide-monophosphate binding domain RL_RS19210 SM00419 helix_turn_helix, cAMP Regulatory protein RL_RS19230 SM00267 diguanylate cyclase RL_RS19275 SM00382 ATPases associated with a variety of cellular activities RL_RS19280 SM00382 ATPases associated with a variety of cellular activities RL_RS19300 SM00014 Acid phosphatase homologues RL_RS19305 SM00387 Histidine kinase-like ATPases RL_RS19305 SM00388 His Kinase A (phosphoacceptor) domain RL_RS19305 SM00448 cheY-homologous receiver domain RL_RS19310 SM00421 helix_turn_helix, Lux Regulon RL_RS19310 SM00448 cheY-homologous receiver domain RL_RS19325 SM00382 ATPases associated with a variety of cellular activities RL_RS19330 SM00382 ATPases associated with a variety of cellular activities RL_RS19380 SM00448 cheY-homologous receiver domain RL_RS19380 SM00862 Transcriptional regulatory protein, C terminal RL_RS19385 SM00448 cheY-homologous receiver domain RL_RS19415 SM00363 S4 RNA-binding domain RL_RS19430 SM00788 Adenylosuccinate synthetase RL_RS19445 SM00052 Putative diguanylate phosphodiesterase RL_RS19445 SM00267 diguanylate cyclase RL_RS19480 SM00822 RL_RS19480 RL_RS19485 SM00822 RL_RS19485 RL_RS19515 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS19560 SM00354 helix_turn _helix lactose operon repressor RL_RS19585 SM00382 ATPases associated with a variety of cellular activities RL_RS19615 SM00382 ATPases associated with a variety of cellular activities RL_RS19665 SM00382 ATPases associated with a variety of cellular activities RL_RS19755 SM00564 beta-propeller repeat RL_RS19795 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS19795 SM00895 RL_RS19795 RL_RS19810 SM00382 ATPases associated with a variety of cellular activities RL_RS19820 SM00382 ATPases associated with a variety of cellular activities RL_RS19845 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS19845 SM00895 RL_RS19845 RL_RS19850 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS19890 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS19895 SM00382 ATPases associated with a variety of cellular activities RL_RS19915 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS19915 SM00895 RL_RS19915 RL_RS19920 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS19925 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS19930 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS19975 SM00363 S4 RNA-binding domain RL_RS20015 SM00354 helix_turn _helix lactose operon repressor RL_RS20035 SM00382 ATPases associated with a variety of cellular activities RL_RS20055 SM00382 ATPases associated with a variety of cellular activities RL_RS20090 SM00382 ATPases associated with a variety of cellular activities RL_RS20090 SM00448 cheY-homologous receiver domain RL_RS20095 SM00387 Histidine kinase-like ATPases RL_RS20095 SM00388 His Kinase A (phosphoacceptor) domain RL_RS20120 SM00855 Phosphoglycerate mutase family RL_RS20125 SM00052 Putative diguanylate phosphodiesterase RL_RS20125 SM00267 diguanylate cyclase RL_RS20150 SM00342 helix_turn_helix, arabinose operon control protein RL_RS20175 SM00382 ATPases associated with a variety of cellular activities RL_RS20180 SM00382 ATPases associated with a variety of cellular activities RL_RS20420 SM00052 Putative diguanylate phosphodiesterase RL_RS20420 SM00091 PAS domain RL_RS20420 SM00267 diguanylate cyclase RL_RS20455 SM00382 ATPases associated with a variety of cellular activities RL_RS20555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS20555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS20565 SM00966 SpoVT / AbrB like domain RL_RS20580 SM00382 ATPases associated with a variety of cellular activities RL_RS20625 SM01350 RL_RS20625 RL_RS20635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS20640 SM00530 Helix-turn-helix XRE-family like proteins RL_RS20670 SM00861 Transketolase, pyrimidine binding domain RL_RS20675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RL_RS20695 SM01091 Transporter associated domain RL_RS20735 SM00382 ATPases associated with a variety of cellular activities RL_RS20780 SM00822 RL_RS20780 RL_RS20785 SM00448 cheY-homologous receiver domain RL_RS20790 SM00138 Methyltransferase, chemotaxis proteins RL_RS20795 SM00260 Two component signalling adaptor domain RL_RS20800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS20800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS20805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS20805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS20810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS20810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS20815 SM00260 Two component signalling adaptor domain RL_RS20820 SM00073 Histidine Phosphotransfer domain RL_RS20820 SM00260 Two component signalling adaptor domain RL_RS20820 SM00387 Histidine kinase-like ATPases RL_RS20820 SM01231 RL_RS20820 RL_RS20825 SM00448 cheY-homologous receiver domain RL_RS20840 SM00671 Sel1-like repeats. RL_RS20855 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS20870 SM01001 AIR carboxylase RL_RS20885 SM00028 Tetratricopeptide repeats RL_RS20900 SM00530 Helix-turn-helix XRE-family like proteins RL_RS20915 SM00822 RL_RS20915 RL_RS20920 SM00342 helix_turn_helix, arabinose operon control protein RL_RS20985 SM00382 ATPases associated with a variety of cellular activities RL_RS20985 SM00448 cheY-homologous receiver domain RL_RS21030 SM00257 Lysin motif RL_RS21040 SM00244 prohibitin homologues RL_RS21050 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS21120 SM00448 cheY-homologous receiver domain RL_RS21185 SM00028 Tetratricopeptide repeats RL_RS21190 SM00448 cheY-homologous receiver domain RL_RS21190 SM00862 Transcriptional regulatory protein, C terminal RL_RS21195 SM00387 Histidine kinase-like ATPases RL_RS21195 SM00388 His Kinase A (phosphoacceptor) domain RL_RS21200 SM00460 Transglutaminase/protease-like homologues RL_RS21210 SM00460 Transglutaminase/protease-like homologues RL_RS21225 SM00642 Alpha-amylase domain RL_RS21245 SM00642 Alpha-amylase domain RL_RS21290 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS21290 SM01080 RL_RS21290 RL_RS21295 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS21305 SM00028 Tetratricopeptide repeats RL_RS21310 SM00911 HWE histidine kinase RL_RS21330 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RL_RS21330 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RL_RS21345 SM00052 Putative diguanylate phosphodiesterase RL_RS21345 SM00091 PAS domain RL_RS21345 SM00267 diguanylate cyclase RL_RS21375 SM00354 helix_turn _helix lactose operon repressor RL_RS21380 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS21390 SM00833 Cobalamin synthesis protein cobW C-terminal domain RL_RS21395 SM00320 WD40 repeats RL_RS21410 SM00971 Serine acetyltransferase, N-terminal RL_RS21415 SM00267 diguanylate cyclase RL_RS21470 SM01118 RL_RS21470 RL_RS21475 SM00880 RL_RS21475 RL_RS21485 SM00450 Rhodanese Homology Domain RL_RS21490 SM00052 Putative diguanylate phosphodiesterase RL_RS21490 SM00267 diguanylate cyclase RL_RS21525 SM00382 ATPases associated with a variety of cellular activities RL_RS21530 SM00354 helix_turn _helix lactose operon repressor RL_RS21545 SM00354 helix_turn _helix lactose operon repressor RL_RS21565 SM00342 helix_turn_helix, arabinose operon control protein RL_RS21565 SM00871 Bacterial transcription activator, effector binding domain RL_RS21590 SM00342 helix_turn_helix, arabinose operon control protein RL_RS21610 SM00382 ATPases associated with a variety of cellular activities RL_RS21640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS21640 SM00387 Histidine kinase-like ATPases RL_RS21640 SM00388 His Kinase A (phosphoacceptor) domain RL_RS21645 SM00448 cheY-homologous receiver domain RL_RS21645 SM00862 Transcriptional regulatory protein, C terminal RL_RS21680 SM00342 helix_turn_helix, arabinose operon control protein RL_RS21690 SM00478 endonuclease III RL_RS21690 SM00525 RL_RS21690 RL_RS21730 SM00382 ATPases associated with a variety of cellular activities RL_RS21790 SM00822 RL_RS21790 RL_RS21805 SM00382 ATPases associated with a variety of cellular activities RL_RS21815 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS21815 SM00895 RL_RS21815 RL_RS21820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain RL_RS21830 SM00822 RL_RS21830 RL_RS21835 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS21840 SM00354 helix_turn _helix lactose operon repressor RL_RS21850 SM00822 RL_RS21850 RL_RS21865 SM00382 ATPases associated with a variety of cellular activities RL_RS21890 SM00354 helix_turn _helix lactose operon repressor RL_RS21900 SM00382 ATPases associated with a variety of cellular activities RL_RS21920 SM00354 helix_turn _helix lactose operon repressor RL_RS21940 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain RL_RS21970 SM00422 helix_turn_helix, mercury resistance RL_RS22035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS22035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS22075 SM00382 ATPases associated with a variety of cellular activities RL_RS22075 SM01086 C-terminal, D2-small domain, of ClpB protein RL_RS22090 SM00937 RL_RS22090 RL_RS22095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RL_RS22165 SM00957 SecA DEAD-like domain RL_RS22165 SM00958 SecA preprotein cross-linking domain RL_RS22215 SM00100 Cyclic nucleotide-monophosphate binding domain RL_RS22235 SM00507 HNH nucleases RL_RS22240 SM00478 endonuclease III RL_RS22275 SM00893 Electron transfer flavoprotein domain RL_RS22280 SM00893 Electron transfer flavoprotein domain RL_RS22315 SM00448 cheY-homologous receiver domain RL_RS22330 SM00382 ATPases associated with a variety of cellular activities RL_RS22345 SM00563 Phosphate acyltransferases RL_RS22380 SM00849 Metallo-beta-lactamase superfamily RL_RS22420 SM00327 von Willebrand factor (vWF) type A domain RL_RS22430 SM00271 DnaJ molecular chaperone homology domain RL_RS22440 SM00116 Domain in cystathionine beta-synthase and other proteins. RL_RS22440 SM01091 Transporter associated domain RL_RS22495 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS22495 SM00895 RL_RS22495 RL_RS22500 SM00833 Cobalamin synthesis protein cobW C-terminal domain RL_RS22560 SM00382 ATPases associated with a variety of cellular activities RL_RS22585 SM00354 helix_turn _helix lactose operon repressor RL_RS22610 SM00344 helix_turn_helix ASNC type RL_RS22625 SM00260 Two component signalling adaptor domain RL_RS22630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) RL_RS22630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS22650 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RL_RS22650 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RL_RS22655 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region RL_RS22670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RL_RS22675 SM00822 RL_RS22675 RL_RS22680 SM00422 helix_turn_helix, mercury resistance RL_RS22700 SM00382 ATPases associated with a variety of cellular activities RL_RS22730 SM00382 ATPases associated with a variety of cellular activities RL_RS22755 SM00487 DEAD-like helicases superfamily RL_RS22755 SM00490 helicase superfamily c-terminal domain RL_RS22760 SM00382 ATPases associated with a variety of cellular activities RL_RS22765 SM00382 ATPases associated with a variety of cellular activities RL_RS22790 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS22790 SM00895 RL_RS22790 RL_RS22810 SM01130 RL_RS22810 RL_RS22820 SM00563 Phosphate acyltransferases RL_RS22845 SM00822 RL_RS22845 RL_RS22870 SM00861 Transketolase, pyrimidine binding domain RL_RS22875 SM00881 CoA binding domain RL_RS22945 SM00382 ATPases associated with a variety of cellular activities RL_RS22970 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS23025 SM00382 ATPases associated with a variety of cellular activities RL_RS23030 SM00382 ATPases associated with a variety of cellular activities RL_RS23090 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS23090 SM00895 RL_RS23090 RL_RS23095 SM00895 RL_RS23095 RL_RS23100 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS23110 SM01130 RL_RS23110 RL_RS23120 SM00382 ATPases associated with a variety of cellular activities RL_RS23205 SM01152 RL_RS23205 RL_RS23280 SM00382 ATPases associated with a variety of cellular activities RL_RS23335 SM00382 ATPases associated with a variety of cellular activities RL_RS23370 SM00382 ATPases associated with a variety of cellular activities RL_RS23405 SM00382 ATPases associated with a variety of cellular activities RL_RS23405 SM00962 SRP54-type protein, GTPase domain RL_RS23405 SM00963 SRP54-type protein, helical bundle domain RL_RS23410 SM00729 Elongator protein 3, MiaB family, Radical SAM RL_RS23425 SM00382 ATPases associated with a variety of cellular activities RL_RS23425 SM00962 SRP54-type protein, GTPase domain RL_RS23425 SM00963 SRP54-type protein, helical bundle domain RL_RS23430 SM00830 Chorismate mutase type II RL_RS23455 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS23455 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RL_RS23485 SM00448 cheY-homologous receiver domain RL_RS23485 SM00862 Transcriptional regulatory protein, C terminal RL_RS23490 SM00100 Cyclic nucleotide-monophosphate binding domain RL_RS23505 SM00382 ATPases associated with a variety of cellular activities RL_RS23505 SM00843 RL_RS23505 RL_RS23515 SM00938 Nitrogen regulatory protein P-II RL_RS23535 SM00464 Found in ATP-dependent protease La (LON) RL_RS23565 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS23565 SM00895 RL_RS23565 RL_RS23595 SM00382 ATPases associated with a variety of cellular activities RL_RS23605 SM00382 ATPases associated with a variety of cellular activities RL_RS23630 SM01150 RL_RS23630 RL_RS23695 SM00841 Elongation factor P, C-terminal RL_RS23695 SM01185 RL_RS23695 RL_RS23715 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS23715 SM00866 RL_RS23715 RL_RS23740 SM00382 ATPases associated with a variety of cellular activities RL_RS23745 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain RL_RS23750 SM00347 helix_turn_helix multiple antibiotic resistance protein RL_RS23770 SM01058 CarD-like/TRCF domain RL_RS23780 SM00363 S4 RNA-binding domain RL_RS23785 SM00490 helicase superfamily c-terminal domain RL_RS23795 SM00822 RL_RS23795 RL_RS23855 SM00420 helix_turn_helix, Deoxyribose operon repressor RL_RS23855 SM01134 RL_RS23855 RL_RS23865 SM00062 Bacterial periplasmic substrate-binding proteins RL_RS23875 SM00382 ATPases associated with a variety of cellular activities RL_RS23885 SM00878 Biotin carboxylase C-terminal domain RL_RS23890 SM00421 helix_turn_helix, Lux Regulon RL_RS23895 SM00382 ATPases associated with a variety of cellular activities RL_RS23915 SM01068 Putative carbohydrate binding domain RL_RS23925 SM00382 ATPases associated with a variety of cellular activities RL_RS23930 SM00382 ATPases associated with a variety of cellular activities RL_RS23960 SM00382 ATPases associated with a variety of cellular activities RL_RS24025 SM00857 Resolvase, N terminal domain RL_RS24095 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase RL_RS24120 SM00382 ATPases associated with a variety of cellular activities RL_RS24145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RL_RS24145 SM00245 tail specific protease RL_RS24170 SM00481 DNA polymerase alpha chain like domain RL_RS24220 SM01329 RL_RS24220 RL_RS24225 SM00014 Acid phosphatase homologues RL_RS24240 SM00382 ATPases associated with a variety of cellular activities RL_RS24250 SM00098 Alkaline phosphatase homologues RL_RS24260 SM00859 Semialdehyde dehydrogenase, NAD binding domain RL_RS24270 SM00267 diguanylate cyclase RL_RS24275 SM00947 Carbonic anhydrase RL_RS24295 SM00798 AICARFT/IMPCHase bienzyme RL_RS24295 SM00851 MGS-like domain RL_RS24360 SM00470 ParB-like nuclease domain RL_RS24375 SM01228 RL_RS24375 RL_RS24385 SM00357 Cold shock protein domain RL_RS24385 SM00382 ATPases associated with a variety of cellular activities RL_RS24385 SM00959 Rho termination factor, N-terminal domain RL_RS24435 SM00433 TopoisomeraseII RL_RS25085 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS25200 SM00433 TopoisomeraseII RL_RS25425 SM00388 His Kinase A (phosphoacceptor) domain RL_RS26170 SM00490 helicase superfamily c-terminal domain RL_RS26710 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RL_RS26710 SM00475 5'-3' exonuclease RL_RS28320 SM00267 diguanylate cyclase RL_RS28530 SM00382 ATPases associated with a variety of cellular activities RL_RS28805 SM01266 RL_RS28805 RL_RS30005 SM00487 DEAD-like helicases superfamily RL_RS30005 SM00490 helicase superfamily c-terminal domain RL_RS30365 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS30665 SM00482 DNA polymerase A domain RL_RS31330 SM00862 Transcriptional regulatory protein, C terminal RL_RS31845 SM00448 cheY-homologous receiver domain RL_RS31850 SM00388 His Kinase A (phosphoacceptor) domain RL_RS31930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). RL_RS31930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RL_RS32990 SM00433 TopoisomeraseII RL_RS33605 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS33610 SM00316 Ribosomal protein S1-like RNA-binding domain RL_RS34365 SM00874 tRNA synthetase B5 domain RL_RS34720 SM00345 helix_turn_helix gluconate operon transcriptional repressor RL_RS34720 SM00895 RL_RS34720 RL_RS34880 SM01091 Transporter associated domain RL_RS35490 SM00858 RL_RS35490 RL_RS36935 SM00530 Helix-turn-helix XRE-family like proteins RL_RS36945 SM00530 Helix-turn-helix XRE-family like proteins