locus-tag	class	description
RLV_RS00010	COG1475	DNA binding
RLV_RS00015	COG0640	Transcriptional regulator
RLV_RS00025	COG1278	Cold shock
RLV_RS00045	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
RLV_RS00080	COG0210	DNA helicase
RLV_RS00115	COG0210	DNA helicase
RLV_RS00145	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RLV_RS00150	COG0708	Exodeoxyribonuclease III
RLV_RS00160	COG3547	Transposase (IS116 IS110 IS902 family)
RLV_RS00190	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RLV_RS00305	COG4176	ABC-type proline glycine betaine transport system permease component
RLV_RS00310	COG2113	Glycine betaine
RLV_RS00340	COG1522	sequence-specific DNA binding
RLV_RS00360	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RLV_RS00365	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
RLV_RS00405	COG3485	protocatechuate 3,4-dioxygenase
RLV_RS00445	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RLV_RS00525	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS00540	COG1802	Transcriptional regulator
RLV_RS00550	COG0318	PFAM AMP-dependent synthetase and ligase
RLV_RS00570	COG0251	oxidation-reduction process
RLV_RS00620	COG4372	Transposase
RLV_RS00625	COG3436	PFAM IS66 Orf2 family protein
RLV_RS00630	COG2963	transposase activity
RLV_RS00655	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RLV_RS00665	COG2022	thiamine diphosphate biosynthetic process
RLV_RS00680	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
RLV_RS00685	COG3161	chorismate lyase activity
RLV_RS00710	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RLV_RS00770	COG0784	Response regulator, receiver
RLV_RS00770	COG2205	protein histidine kinase activity
RLV_RS00775	COG0745	RESPONSE REGULATOR receiver
RLV_RS00880	COG0527	aspartate kinase activity
RLV_RS00885	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RLV_RS00890	COG3383	formate dehydrogenase (NAD+) activity
RLV_RS00900	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RLV_RS00905	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RLV_RS00910	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RLV_RS00915	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RLV_RS00930	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RLV_RS00935	COG1181	Belongs to the D-alanine--D-alanine ligase family
RLV_RS00950	COG1181	Belongs to the D-alanine--D-alanine ligase family
RLV_RS00960	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RLV_RS00965	COG1917	Cupin 2, conserved barrel domain protein
RLV_RS00965	COG1396	sequence-specific DNA binding
RLV_RS00975	COG3842	ATPase activity
RLV_RS00980	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS00995	COG1473	amidohydrolase
RLV_RS01000	COG0006	proline dipeptidase activity
RLV_RS01015	COG0747	negative chemotaxis
RLV_RS01020	COG0601	transmembrane transport
RLV_RS01025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS01035	COG4372	Transposase
RLV_RS01040	COG3436	PFAM IS66 Orf2 family protein
RLV_RS01045	COG2963	transposase activity
RLV_RS01050	COG1522	sequence-specific DNA binding
RLV_RS01055	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
RLV_RS01060	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS01085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS01090	COG3842	ATPase activity
RLV_RS01095	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS01100	COG3608	succinylglutamate desuccinylase aspartoacylase
RLV_RS01105	COG1414	Transcriptional regulator
RLV_RS01110	COG1024	Enoyl-CoA hydratase
RLV_RS01150	COG1509	lysine 2,3-aminomutase activity
RLV_RS01155	COG1181	Belongs to the D-alanine--D-alanine ligase family
RLV_RS01165	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
RLV_RS01185	COG2086	electron transfer activity
RLV_RS01190	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
RLV_RS01215	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RLV_RS01245	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RLV_RS01250	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS01330	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS01415	COG0251	oxidation-reduction process
RLV_RS01420	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS01455	COG0584	glycerophosphoryl diester phosphodiesterase
RLV_RS01465	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RLV_RS01490	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
RLV_RS01490	COG1024	Enoyl-CoA hydratase
RLV_RS01590	COG0840	transmembrane signaling receptor activity
RLV_RS01605	COG0395	ABC-type sugar transport system, permease component
RLV_RS01625	COG1940	carbohydrate kinase activity
RLV_RS01630	COG1840	ABC-type Fe3 transport system, periplasmic component
RLV_RS01635	COG3842	ATPase activity
RLV_RS01640	COG1178	ABC-type Fe3 transport system permease component
RLV_RS01645	COG1082	Xylose isomerase domain protein TIM barrel
RLV_RS01655	COG0538	isocitrate dehydrogenase activity
RLV_RS01665	COG2971	BadF BadG BcrA BcrD
RLV_RS01670	COG2188	Transcriptional regulator
RLV_RS01695	COG1475	DNA binding
RLV_RS01725	COG5489	Protein of unknown function (DUF736)
RLV_RS01735	COG3831	ATPase activity
RLV_RS01750	COG3505	Type IV secretory pathway VirD4
RLV_RS01765	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RLV_RS01770	COG4959	Type IV secretory pathway protease TraF
RLV_RS01775	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS01820	COG2948	multi-organism process
RLV_RS01830	COG3504	Conjugal transfer protein
RLV_RS01835	COG3701	Conjugal transfer protein
RLV_RS01840	COG3846	protein secretion by the type IV secretion system
RLV_RS01850	COG5314	conjugation
RLV_RS01855	COG3451	type IV secretory pathway VirB4
RLV_RS01860	COG5268	conjugation
RLV_RS01865	COG3838	Conjugal transfer protein Trbc
RLV_RS01870	COG4962	Type ii secretion system protein e
RLV_RS01875	COG3916	Acyl-homoserine-lactone synthase
RLV_RS01880	COG1192	Involved in chromosome partitioning
RLV_RS01885	COG1475	DNA binding
RLV_RS01905	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
RLV_RS01950	COG1609	Transcriptional regulator
RLV_RS01955	COG1653	transport
RLV_RS01960	COG1175	transmembrane transport
RLV_RS01965	COG0395	ABC-type sugar transport system, permease component
RLV_RS01970	COG1621	beta-fructofuranosidase activity
RLV_RS01975	COG3842	ATPase activity
RLV_RS01995	COG1609	Transcriptional regulator
RLV_RS02020	COG0673	inositol 2-dehydrogenase activity
RLV_RS02065	COG1396	sequence-specific DNA binding
RLV_RS02070	COG2223	nitrite transmembrane transporter activity
RLV_RS02080	COG1464	Belongs to the NlpA lipoprotein family
RLV_RS02090	COG2011	ABC-type metal ion transport system permease component
RLV_RS02100	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
RLV_RS02100	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
RLV_RS02115	COG0673	inositol 2-dehydrogenase activity
RLV_RS02120	COG0346	lactoylglutathione lyase activity
RLV_RS02145	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RLV_RS02175	COG0395	ABC-type sugar transport system, permease component
RLV_RS02185	COG0667	Aldo Keto reductase
RLV_RS02195	COG1294	oxidase, subunit
RLV_RS02200	COG1271	oxidase subunit
RLV_RS02205	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
RLV_RS02210	COG4988	ABC transporter
RLV_RS02225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS02235	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RLV_RS02245	COG1175	transmembrane transport
RLV_RS02260	COG0584	glycerophosphoryl diester phosphodiesterase
RLV_RS02265	COG1609	Transcriptional regulator
RLV_RS02275	COG3706	GGDEF domain
RLV_RS02300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS02310	COG0747	negative chemotaxis
RLV_RS02320	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS02325	COG1129	ABC transporter
RLV_RS02330	COG4213	ABC transporter substrate-binding protein
RLV_RS02360	COG1609	Transcriptional regulator
RLV_RS02365	COG0673	inositol 2-dehydrogenase activity
RLV_RS02380	COG1175	transmembrane transport
RLV_RS02385	COG0395	ABC-type sugar transport system, permease component
RLV_RS02395	COG1609	Transcriptional regulator
RLV_RS02400	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS02405	COG1129	ABC transporter
RLV_RS02410	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS02445	COG3842	ATPase activity
RLV_RS02455	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS02465	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RLV_RS02475	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS02485	COG0402	S-adenosylhomocysteine deaminase activity
RLV_RS02490	COG1079	Belongs to the binding-protein-dependent transport system permease family
RLV_RS02500	COG3845	ABC transporter
RLV_RS02520	COG0204	Acyl-transferase
RLV_RS02520	COG0318	PFAM AMP-dependent synthetase and ligase
RLV_RS02525	COG4589	Belongs to the CDS family
RLV_RS02535	COG0484	heat shock protein binding
RLV_RS02550	COG0625	glutathione transferase activity
RLV_RS02560	COG4172	Belongs to the ABC transporter superfamily
RLV_RS02565	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS02570	COG0601	transmembrane transport
RLV_RS02575	COG0596	Alpha beta hydrolase
RLV_RS02655	COG1120	ATPase activity
RLV_RS02675	COG4774	siderophore transport
RLV_RS02685	COG1877	trehalose-phosphatase activity
RLV_RS02705	COG4214	carbohydrate transport
RLV_RS02715	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS02720	COG5002	protein histidine kinase activity
RLV_RS02720	COG5000	phosphorelay sensor kinase activity
RLV_RS02725	COG0745	RESPONSE REGULATOR receiver
RLV_RS02755	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RLV_RS02770	COG0583	DNA-binding transcription factor activity
RLV_RS02775	COG0667	Aldo Keto reductase
RLV_RS02790	COG3842	ATPase activity
RLV_RS02795	COG0395	ABC-type sugar transport system, permease component
RLV_RS02800	COG1175	transmembrane transport
RLV_RS02805	COG1653	transport
RLV_RS02835	COG0511	ligase activity, forming carbon-carbon bonds
RLV_RS02840	COG0439	Biotin carboxylase
RLV_RS02855	COG1984	allophanate hydrolase subunit 2
RLV_RS02860	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
RLV_RS02865	COG0436	Aminotransferase
RLV_RS02875	COG4221	oxidoreductase activity
RLV_RS02880	COG0765	amino acid transport
RLV_RS02885	COG0765	amino acid transport
RLV_RS02890	COG1126	abc transporter atp-binding protein
RLV_RS02895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS02900	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
RLV_RS02915	COG0251	oxidation-reduction process
RLV_RS02930	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS02940	COG1129	ABC transporter
RLV_RS02945	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS02955	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS02960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS02970	COG1116	anion transmembrane transporter activity
RLV_RS03000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS03010	COG1522	sequence-specific DNA binding
RLV_RS03040	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS03045	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS03055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS03075	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS03085	COG2084	Dehydrogenase
RLV_RS03090	COG3265	gluconokinase activity
RLV_RS03095	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS03100	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS03105	COG1063	alcohol dehydrogenase
RLV_RS03110	COG1609	Transcriptional regulator
RLV_RS03120	COG2304	oxidoreductase activity
RLV_RS03130	COG0657	acetylesterase activity
RLV_RS03155	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS03160	COG0601	transmembrane transport
RLV_RS03165	COG0747	negative chemotaxis
RLV_RS03170	COG1024	Enoyl-CoA hydratase
RLV_RS03180	COG1960	acyl-CoA dehydrogenase activity
RLV_RS03185	COG1250	3-hydroxyacyl-CoA dehydrogenase
RLV_RS03185	COG0824	Thioesterase
RLV_RS03190	COG3246	L-lysine catabolic process to acetate
RLV_RS03200	COG0583	DNA-binding transcription factor activity
RLV_RS03215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS03220	COG5001	Diguanylate cyclase
RLV_RS03220	COG3300	MHYT domain
RLV_RS03235	COG0436	Aminotransferase
RLV_RS03250	COG0583	DNA-binding transcription factor activity
RLV_RS03265	COG0765	amino acid transport
RLV_RS03270	COG0765	amino acid transport
RLV_RS03275	COG1126	abc transporter atp-binding protein
RLV_RS03285	COG1335	isochorismatase
RLV_RS03290	COG3845	ABC transporter
RLV_RS03300	COG1335	isochorismatase
RLV_RS03305	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS03310	COG1079	Belongs to the binding-protein-dependent transport system permease family
RLV_RS03335	COG1116	anion transmembrane transporter activity
RLV_RS03340	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS03345	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS03350	COG0306	phosphate transporter
RLV_RS03355	COG1392	Phosphate transport regulator
RLV_RS03370	COG4603	Belongs to the binding-protein-dependent transport system permease family
RLV_RS03375	COG3845	ABC transporter
RLV_RS03390	COG0625	glutathione transferase activity
RLV_RS03420	COG1070	Carbohydrate kinase
RLV_RS03425	COG0434	BtpA family
RLV_RS03430	COG1349	DNA-binding transcription factor activity
RLV_RS03435	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS03445	COG0395	ABC-type sugar transport system, permease component
RLV_RS03460	COG2072	flavoprotein involved in K transport
RLV_RS03500	COG0022	dehydrogenase e1 component
RLV_RS03510	COG1960	acyl-CoA dehydrogenase activity
RLV_RS03515	COG0183	Belongs to the thiolase family
RLV_RS03530	COG1960	acyl-CoA dehydrogenase activity
RLV_RS03535	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
RLV_RS03545	COG2030	dehydratase
RLV_RS03560	COG2205	protein histidine kinase activity
RLV_RS03565	COG0745	RESPONSE REGULATOR receiver
RLV_RS03590	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS03605	COG3718	enzyme involved in inositol metabolism
RLV_RS03610	COG4608	Belongs to the ABC transporter superfamily
RLV_RS03615	COG0444	Belongs to the ABC transporter superfamily
RLV_RS03620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS03625	COG0601	transmembrane transport
RLV_RS03630	COG0747	negative chemotaxis
RLV_RS03635	COG1609	Transcriptional regulator
RLV_RS03645	COG3547	Transposase (IS116 IS110 IS902 family)
RLV_RS03665	COG0006	proline dipeptidase activity
RLV_RS03680	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS03685	COG3842	ATPase activity
RLV_RS03695	COG0395	ABC-type sugar transport system, permease component
RLV_RS03700	COG1175	transmembrane transport
RLV_RS03705	COG1653	transport
RLV_RS03715	COG1609	Transcriptional regulator
RLV_RS03720	COG3250	beta-galactosidase activity
RLV_RS03730	COG1175	transmembrane transport
RLV_RS03735	COG0395	ABC-type sugar transport system, permease component
RLV_RS03765	COG3842	ATPase activity
RLV_RS03770	COG1177	transmembrane transport
RLV_RS03775	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS03790	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS03795	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS03805	COG2267	carboxylic ester hydrolase activity
RLV_RS03825	COG4521	taurine ABC transporter
RLV_RS03835	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS03870	COG1395	domain, Protein
RLV_RS03900	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS03910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS03915	COG1126	abc transporter atp-binding protein
RLV_RS03925	COG1473	amidohydrolase
RLV_RS03930	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS03935	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS03945	COG3668	Plasmid stabilization system
RLV_RS03955	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
RLV_RS03960	COG2323	membrane
RLV_RS03965	COG2186	Transcriptional regulator
RLV_RS03975	COG4608	Belongs to the ABC transporter superfamily
RLV_RS03980	COG0444	Belongs to the ABC transporter superfamily
RLV_RS03985	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS03990	COG0601	transmembrane transport
RLV_RS03995	COG0747	negative chemotaxis
RLV_RS04000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS04010	COG1454	alcohol dehydrogenase
RLV_RS04015	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
RLV_RS04030	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
RLV_RS04035	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS04040	COG1116	anion transmembrane transporter activity
RLV_RS04065	COG1129	ABC transporter
RLV_RS04070	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS04075	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS04080	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RLV_RS04095	COG0395	ABC-type sugar transport system, permease component
RLV_RS04110	COG3842	ATPase activity
RLV_RS04170	COG0488	(ABC) transporter
RLV_RS04205	COG1802	Transcriptional regulator
RLV_RS04250	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
RLV_RS04255	COG0579	oxidoreductase
RLV_RS04265	COG2274	protein secretion by the type I secretion system
RLV_RS04275	COG0523	cobalamin synthesis protein
RLV_RS04285	COG0523	cobalamin synthesis protein
RLV_RS04305	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RLV_RS04310	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS04325	COG0673	inositol 2-dehydrogenase activity
RLV_RS04335	COG2197	response regulator
RLV_RS04350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS04380	COG1215	transferase activity, transferring glycosyl groups
RLV_RS04390	COG0297	glycogen (starch) synthase activity
RLV_RS04400	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
RLV_RS04415	COG3485	protocatechuate 3,4-dioxygenase
RLV_RS04440	COG1137	ATPase activity
RLV_RS04455	COG3485	protocatechuate 3,4-dioxygenase
RLV_RS04460	COG0583	DNA-binding transcription factor activity
RLV_RS04465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS04470	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
RLV_RS04475	COG1609	Transcriptional regulator
RLV_RS04480	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS04485	COG1129	ABC transporter
RLV_RS04490	COG1609	Transcriptional regulator
RLV_RS04500	COG5489	Protein of unknown function (DUF736)
RLV_RS04505	COG3831	ATPase activity
RLV_RS04510	COG3916	Acyl-homoserine-lactone synthase
RLV_RS04515	COG1192	Involved in chromosome partitioning
RLV_RS04520	COG1475	DNA binding
RLV_RS04525	COG1414	Transcriptional regulator
RLV_RS04530	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS04545	COG1175	transmembrane transport
RLV_RS04550	COG3833	ABC-type maltose transport systems, permease component
RLV_RS04555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS04560	COG0395	ABC-type sugar transport system, permease component
RLV_RS04565	COG1175	transmembrane transport
RLV_RS04580	COG0657	acetylesterase activity
RLV_RS04595	COG1349	DNA-binding transcription factor activity
RLV_RS04605	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS04625	COG2267	carboxylic ester hydrolase activity
RLV_RS04630	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RLV_RS04635	COG1940	carbohydrate kinase activity
RLV_RS04645	COG0840	transmembrane signaling receptor activity
RLV_RS04690	COG1749	Flagellar hook protein flgE
RLV_RS04700	COG1309	transcriptional regulator
RLV_RS04715	COG1024	Enoyl-CoA hydratase
RLV_RS04720	COG1309	transcriptional regulator
RLV_RS04725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS04730	COG0765	amino acid transport
RLV_RS04735	COG0765	amino acid transport
RLV_RS04765	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS04770	COG0765	amino acid transport
RLV_RS04775	COG0765	amino acid transport
RLV_RS04800	COG2826	transposase and inactivated derivatives, IS30 family
RLV_RS04810	COG1309	transcriptional regulator
RLV_RS04840	COG1129	ABC transporter
RLV_RS04845	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS04850	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS04855	COG3547	Transposase (IS116 IS110 IS902 family)
RLV_RS04870	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RLV_RS04875	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RLV_RS04880	COG1349	DNA-binding transcription factor activity
RLV_RS04885	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS04890	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS04895	COG1129	ABC transporter
RLV_RS04930	COG1349	DNA-binding transcription factor activity
RLV_RS04935	COG0149	triose-phosphate isomerase activity
RLV_RS04940	COG0698	ribose 5-phosphate isomerase
RLV_RS04960	COG0395	ABC-type sugar transport system, permease component
RLV_RS04965	COG1175	transmembrane transport
RLV_RS04975	COG3842	ATPase activity
RLV_RS04980	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS04985	COG2186	Transcriptional regulator
RLV_RS04995	COG0747	negative chemotaxis
RLV_RS05000	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS05010	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
RLV_RS05030	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS05040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS05070	COG3842	ATPase activity
RLV_RS05075	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
RLV_RS05080	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
RLV_RS05085	COG0395	ABC-type sugar transport system, permease component
RLV_RS05090	COG1175	transmembrane transport
RLV_RS05095	COG2182	Extracellular solute-binding protein
RLV_RS05100	COG2971	BadF BadG BcrA BcrD
RLV_RS05105	COG1349	DNA-binding transcription factor activity
RLV_RS05110	COG1486	melibiose metabolic process
RLV_RS05135	COG1609	Transcriptional regulator
RLV_RS05145	COG1175	transmembrane transport
RLV_RS05150	COG0395	ABC-type sugar transport system, permease component
RLV_RS05155	COG3842	ATPase activity
RLV_RS05160	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
RLV_RS05175	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS05200	COG0793	Belongs to the peptidase S41A family
RLV_RS05210	COG1473	amidohydrolase
RLV_RS05215	COG1126	abc transporter atp-binding protein
RLV_RS05220	COG0765	amino acid transport
RLV_RS05245	COG4585	Histidine kinase
RLV_RS05250	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS05255	COG1129	ABC transporter
RLV_RS05260	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS05275	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
RLV_RS05285	COG1846	Transcriptional regulator
RLV_RS05290	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS05300	COG0583	DNA-binding transcription factor activity
RLV_RS05310	COG1309	transcriptional regulator
RLV_RS05325	COG0318	PFAM AMP-dependent synthetase and ligase
RLV_RS05335	COG1802	Transcriptional regulator
RLV_RS05360	COG1116	anion transmembrane transporter activity
RLV_RS05365	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS05370	COG0402	S-adenosylhomocysteine deaminase activity
RLV_RS05380	COG2249	NAD(P)H dehydrogenase (quinone) activity
RLV_RS05385	COG0251	oxidation-reduction process
RLV_RS05390	COG0840	transmembrane signaling receptor activity
RLV_RS05390	COG2972	Histidine kinase
RLV_RS05405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RLV_RS05425	COG0626	cystathionine gamma-synthase activity
RLV_RS05445	COG4774	siderophore transport
RLV_RS05495	COG0277	FAD linked oxidase domain protein
RLV_RS05510	COG0601	transmembrane transport
RLV_RS05515	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS05530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS05540	COG0431	NADPH-dependent FMN reductase
RLV_RS05545	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RLV_RS05550	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RLV_RS05560	COG3706	GGDEF domain
RLV_RS05565	COG2186	Transcriptional regulator
RLV_RS05570	COG0747	negative chemotaxis
RLV_RS05585	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS05590	COG0444	Belongs to the ABC transporter superfamily
RLV_RS05620	COG0405	Gamma-glutamyltransferase
RLV_RS05630	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS05635	COG0444	Belongs to the ABC transporter superfamily
RLV_RS05640	COG4608	Belongs to the ABC transporter superfamily
RLV_RS05670	COG2885	chlorophyll binding
RLV_RS05690	COG0583	DNA-binding transcription factor activity
RLV_RS05725	COG1672	PFAM Archaeal ATPase
RLV_RS05725	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS05730	COG1802	Transcriptional regulator
RLV_RS05745	COG0673	inositol 2-dehydrogenase activity
RLV_RS05755	COG1175	transmembrane transport
RLV_RS05760	COG0395	ABC-type sugar transport system, permease component
RLV_RS05765	COG1940	carbohydrate kinase activity
RLV_RS05775	COG3842	ATPase activity
RLV_RS05780	COG0840	transmembrane signaling receptor activity
RLV_RS05780	COG2972	Histidine kinase
RLV_RS05785	COG1858	cytochrome C peroxidase
RLV_RS05795	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
RLV_RS05800	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
RLV_RS05840	COG2197	response regulator
RLV_RS05860	COG1733	regulation of RNA biosynthetic process
RLV_RS05865	COG0604	alcohol dehydrogenase
RLV_RS05865	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS05865	COG3321	synthase
RLV_RS05875	COG0318	PFAM AMP-dependent synthetase and ligase
RLV_RS05880	COG0183	Belongs to the thiolase family
RLV_RS05885	COG5002	protein histidine kinase activity
RLV_RS05890	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RLV_RS05910	COG1295	ribonuclease BN
RLV_RS05915	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
RLV_RS05930	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS05935	COG1461	Dihydroxyacetone kinase
RLV_RS05940	COG2376	Dihydroxyacetone kinase
RLV_RS05950	COG0673	inositol 2-dehydrogenase activity
RLV_RS05955	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS05960	COG1129	ABC transporter
RLV_RS05975	COG0287	Prephenate dehydrogenase
RLV_RS05990	COG2186	Transcriptional regulator
RLV_RS06020	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
RLV_RS06030	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
RLV_RS06035	COG1063	alcohol dehydrogenase
RLV_RS06040	COG1522	sequence-specific DNA binding
RLV_RS06045	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RLV_RS06050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS06060	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
RLV_RS06070	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
RLV_RS06105	COG0784	Response regulator, receiver
RLV_RS06105	COG4191	Histidine kinase
RLV_RS06180	COG0297	glycogen (starch) synthase activity
RLV_RS06215	COG3838	Conjugal transfer protein Trbc
RLV_RS06220	COG3702	type iv secretory pathway
RLV_RS06225	COG3451	type IV secretory pathway VirB4
RLV_RS06240	COG3704	protein secretion by the type IV secretion system
RLV_RS06250	COG3736	Type IV secretory pathway, component VirB8
RLV_RS06255	COG3504	Conjugal transfer protein
RLV_RS06260	COG2948	multi-organism process
RLV_RS06265	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
RLV_RS06400	COG0667	Aldo Keto reductase
RLV_RS06405	COG0656	L-ascorbic acid biosynthetic process
RLV_RS06410	COG0667	Aldo Keto reductase
RLV_RS06420	COG0583	DNA-binding transcription factor activity
RLV_RS06430	COG1525	nuclease
RLV_RS06445	COG0756	dUTP diphosphatase activity
RLV_RS06475	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS06475	COG1672	PFAM Archaeal ATPase
RLV_RS06495	COG0784	Response regulator, receiver
RLV_RS06575	COG3344	reverse transcriptase
RLV_RS06580	COG4372	Transposase
RLV_RS06595	COG3344	reverse transcriptase
RLV_RS06655	COG1881	PFAM PEBP family protein
RLV_RS06675	COG1073	alpha beta
RLV_RS06720	COG0840	transmembrane signaling receptor activity
RLV_RS06725	COG0583	DNA-binding transcription factor activity
RLV_RS06735	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
RLV_RS06750	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS06755	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
RLV_RS06770	COG1609	Transcriptional regulator
RLV_RS06775	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RLV_RS06785	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
RLV_RS06790	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RLV_RS06795	COG0179	Fumarylacetoacetate (FAA) hydrolase
RLV_RS06805	COG2814	Major facilitator Superfamily
RLV_RS06810	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS06830	COG2963	transposase activity
RLV_RS06860	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS06875	COG1126	abc transporter atp-binding protein
RLV_RS06880	COG0765	amino acid transport
RLV_RS06900	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
RLV_RS06910	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS06915	COG0460	homoserine dehydrogenase
RLV_RS06935	COG0251	oxidation-reduction process
RLV_RS06940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS06985	COG1129	ABC transporter
RLV_RS06990	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS06995	COG4211	Belongs to the binding-protein-dependent transport system permease family
RLV_RS07000	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RLV_RS07015	COG1175	transmembrane transport
RLV_RS07020	COG0395	ABC-type sugar transport system, permease component
RLV_RS07030	COG3842	ATPase activity
RLV_RS07050	COG1335	isochorismatase
RLV_RS07055	COG0596	Alpha beta hydrolase
RLV_RS07065	COG0596	Alpha beta hydrolase
RLV_RS07070	COG3920	Histidine kinase
RLV_RS07085	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07095	COG0071	Belongs to the small heat shock protein (HSP20) family
RLV_RS07110	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RLV_RS07145	COG0583	DNA-binding transcription factor activity
RLV_RS07155	COG0154	amidase activity
RLV_RS07160	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS07170	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RLV_RS07195	COG3386	PFAM SMP-30 Gluconolaconase
RLV_RS07200	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
RLV_RS07220	COG0840	transmembrane signaling receptor activity
RLV_RS07220	COG2972	Histidine kinase
RLV_RS07255	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RLV_RS07260	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
RLV_RS07265	COG2080	2 iron, 2 sulfur cluster binding
RLV_RS07290	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
RLV_RS07295	COG0583	DNA-binding transcription factor activity
RLV_RS07305	COG1335	isochorismatase
RLV_RS07315	COG0583	DNA-binding transcription factor activity
RLV_RS07320	COG2080	2 iron, 2 sulfur cluster binding
RLV_RS07325	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
RLV_RS07330	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RLV_RS07335	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
RLV_RS07340	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
RLV_RS07355	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07360	COG1129	ABC transporter
RLV_RS07375	COG3386	PFAM SMP-30 Gluconolaconase
RLV_RS07430	COG2133	pyrroloquinoline quinone binding
RLV_RS07455	COG3622	Belongs to the hyi family
RLV_RS07460	COG0235	Class ii aldolase
RLV_RS07465	COG3395	kinase activity
RLV_RS07470	COG2084	Dehydrogenase
RLV_RS07485	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07500	COG0583	DNA-binding transcription factor activity
RLV_RS07510	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS07520	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07530	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07535	COG4214	carbohydrate transport
RLV_RS07540	COG1129	ABC transporter
RLV_RS07545	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS07560	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
RLV_RS07565	COG0583	DNA-binding transcription factor activity
RLV_RS07570	COG0179	Fumarylacetoacetate (FAA) hydrolase
RLV_RS07575	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07600	COG0583	DNA-binding transcription factor activity
RLV_RS07620	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS07630	COG4214	carbohydrate transport
RLV_RS07640	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07650	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07655	COG2084	Dehydrogenase
RLV_RS07690	COG3618	amidohydrolase
RLV_RS07705	COG0318	PFAM AMP-dependent synthetase and ligase
RLV_RS07710	COG0583	DNA-binding transcription factor activity
RLV_RS07715	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07730	COG0473	3-isopropylmalate dehydrogenase activity
RLV_RS07750	COG0840	transmembrane signaling receptor activity
RLV_RS07795	COG3609	addiction module antidote protein, CC2985 family
RLV_RS07830	COG1574	metal-dependent hydrolase with the TIM-barrel fold
RLV_RS07845	COG0346	lactoylglutathione lyase activity
RLV_RS07850	COG0583	DNA-binding transcription factor activity
RLV_RS07875	COG2207	Transcriptional regulator
RLV_RS07880	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS07890	COG1335	isochorismatase
RLV_RS07925	COG3609	addiction module antidote protein, CC2985 family
RLV_RS07945	COG4308	Limonene-1,2-epoxide hydrolase catalytic domain
RLV_RS07955	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RLV_RS07960	COG4977	sequence-specific DNA binding
RLV_RS08000	COG0523	cobalamin synthesis protein
RLV_RS08080	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RLV_RS08090	COG2390	Transcriptional regulator
RLV_RS08095	COG0371	Dehydrogenase
RLV_RS08110	COG1175	transmembrane transport
RLV_RS08115	COG0395	ABC-type sugar transport system, permease component
RLV_RS08125	COG4221	oxidoreductase activity
RLV_RS08130	COG3842	ATPase activity
RLV_RS08135	COG3347	Dehydrogenase
RLV_RS08135	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS08140	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
RLV_RS08160	COG1162	GTPase activity
RLV_RS08210	COG4166	transmembrane transport
RLV_RS08220	COG1609	Transcriptional regulator
RLV_RS08225	COG1129	ABC transporter
RLV_RS08230	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS08240	COG0673	inositol 2-dehydrogenase activity
RLV_RS08245	COG1082	Xylose isomerase domain protein TIM barrel
RLV_RS08275	COG0840	transmembrane signaling receptor activity
RLV_RS08285	COG0402	S-adenosylhomocysteine deaminase activity
RLV_RS08310	COG2072	flavoprotein involved in K transport
RLV_RS08315	COG1177	transmembrane transport
RLV_RS08320	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS08325	COG3842	ATPase activity
RLV_RS08330	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RLV_RS08335	COG0583	DNA-binding transcription factor activity
RLV_RS08355	COG0511	ligase activity, forming carbon-carbon bonds
RLV_RS08375	COG1454	alcohol dehydrogenase
RLV_RS08385	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RLV_RS08390	COG0411	ABC transporter
RLV_RS08420	COG1846	Transcriptional regulator
RLV_RS08425	COG2309	aminopeptidase activity
RLV_RS08430	COG1335	isochorismatase
RLV_RS08435	COG3473	Maleate cis-trans isomerase
RLV_RS08440	COG0596	Alpha beta hydrolase
RLV_RS08445	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RLV_RS08450	COG2080	2 iron, 2 sulfur cluster binding
RLV_RS08455	COG2010	Cytochrome c
RLV_RS08455	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RLV_RS08470	COG1840	ABC-type Fe3 transport system, periplasmic component
RLV_RS08475	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS08480	COG1177	transmembrane transport
RLV_RS08485	COG3842	ATPase activity
RLV_RS08495	COG1846	Transcriptional regulator
RLV_RS08500	COG1472	Belongs to the glycosyl hydrolase 3 family
RLV_RS08510	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
RLV_RS08510	COG3608	succinylglutamate desuccinylase aspartoacylase
RLV_RS08520	COG0746	molybdenum cofactor guanylyltransferase activity
RLV_RS08595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS08600	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS08615	COG2188	Transcriptional regulator
RLV_RS08620	COG1063	alcohol dehydrogenase
RLV_RS08630	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS08635	COG1733	regulation of RNA biosynthetic process
RLV_RS08640	COG2085	NADP oxidoreductase coenzyme F420-dependent
RLV_RS08670	COG0300	oxidoreductase activity
RLV_RS08725	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS08820	COG2202	Pas domain
RLV_RS08820	COG3920	Histidine kinase
RLV_RS08835	COG0071	Belongs to the small heat shock protein (HSP20) family
RLV_RS08840	COG0071	Belongs to the small heat shock protein (HSP20) family
RLV_RS08905	COG3831	ATPase activity
RLV_RS08920	COG2161	toxin-antitoxin pair type II binding
RLV_RS08930	COG3505	Type IV secretory pathway VirD4
RLV_RS08960	COG0745	RESPONSE REGULATOR receiver
RLV_RS08965	COG0156	8-amino-7-oxononanoate synthase activity
RLV_RS08975	COG1177	transmembrane transport
RLV_RS08980	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS08985	COG3842	ATPase activity
RLV_RS08995	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
RLV_RS09005	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS09010	COG0745	RESPONSE REGULATOR receiver
RLV_RS09015	COG1595	DNA-templated transcription, initiation
RLV_RS09040	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS09050	COG4177	L-phenylalanine transmembrane transporter activity
RLV_RS09065	COG1137	ATPase activity
RLV_RS09110	COG1024	Enoyl-CoA hydratase
RLV_RS09120	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS09125	COG2203	Gaf domain
RLV_RS09125	COG4251	negative regulation of phosphorylation
RLV_RS09125	COG3706	GGDEF domain
RLV_RS09125	COG5001	Diguanylate cyclase
RLV_RS09130	COG0243	molybdopterin cofactor binding
RLV_RS09155	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
RLV_RS09165	COG4176	ABC-type proline glycine betaine transport system permease component
RLV_RS09175	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
RLV_RS09185	COG0446	pyridine nucleotide-disulphide oxidoreductase
RLV_RS09185	COG1902	pentaerythritol trinitrate reductase activity
RLV_RS09195	COG2086	electron transfer activity
RLV_RS09210	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
RLV_RS09215	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
RLV_RS09220	COG3791	Glutathione-dependent formaldehyde-activating
RLV_RS09225	COG1802	Transcriptional regulator
RLV_RS09230	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS09235	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS09240	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS09250	COG4175	Glycine betaine
RLV_RS09250	COG3448	diguanylate cyclase activity
RLV_RS09255	COG4176	ABC-type proline glycine betaine transport system permease component
RLV_RS09260	COG4176	ABC-type proline glycine betaine transport system permease component
RLV_RS09265	COG3938	Belongs to the proline racemase family
RLV_RS09275	COG0006	proline dipeptidase activity
RLV_RS09290	COG0583	DNA-binding transcription factor activity
RLV_RS09300	COG2203	Gaf domain
RLV_RS09300	COG3706	GGDEF domain
RLV_RS09300	COG4251	negative regulation of phosphorylation
RLV_RS09300	COG5001	Diguanylate cyclase
RLV_RS09315	COG4221	oxidoreductase activity
RLV_RS09330	COG1522	sequence-specific DNA binding
RLV_RS09345	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS09350	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS09365	COG1653	transport
RLV_RS09380	COG3842	ATPase activity
RLV_RS09385	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS09415	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS09420	COG1522	sequence-specific DNA binding
RLV_RS09425	COG4172	Belongs to the ABC transporter superfamily
RLV_RS09435	COG0601	transmembrane transport
RLV_RS09460	COG3395	kinase activity
RLV_RS09465	COG3622	Belongs to the hyi family
RLV_RS09470	COG2084	Dehydrogenase
RLV_RS09480	COG1609	Transcriptional regulator
RLV_RS09485	COG0235	Class ii aldolase
RLV_RS09495	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS09500	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS09505	COG0473	3-isopropylmalate dehydrogenase activity
RLV_RS09510	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS09520	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RLV_RS09575	COG0559	Belongs to the binding-protein-dependent transport system permease family
RLV_RS09595	COG0436	Aminotransferase
RLV_RS09600	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS09605	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS09615	COG2186	Transcriptional regulator
RLV_RS09620	COG0277	FAD linked oxidase domain protein
RLV_RS09620	COG0247	lactate metabolic process
RLV_RS09625	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS09630	COG4221	oxidoreductase activity
RLV_RS09640	COG0459	protein refolding
RLV_RS09645	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
RLV_RS09700	COG3842	ATPase activity
RLV_RS09710	COG0395	ABC-type sugar transport system, permease component
RLV_RS09715	COG1175	transmembrane transport
RLV_RS09740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS09750	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS09765	COG2186	Transcriptional regulator
RLV_RS09770	COG1609	Transcriptional regulator
RLV_RS09785	COG1175	transmembrane transport
RLV_RS09790	COG0395	ABC-type sugar transport system, permease component
RLV_RS09800	COG0840	transmembrane signaling receptor activity
RLV_RS09825	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
RLV_RS09835	COG3842	ATPase activity
RLV_RS09840	COG1175	transmembrane transport
RLV_RS09845	COG0395	ABC-type sugar transport system, permease component
RLV_RS09870	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RLV_RS09880	COG1953	Uracil, thiamine, allantoin
RLV_RS09885	COG0840	transmembrane signaling receptor activity
RLV_RS09895	COG0598	Magnesium transport protein CorA
RLV_RS09905	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS09915	COG0366	Alpha amylase catalytic
RLV_RS09920	COG0366	Alpha amylase catalytic
RLV_RS09925	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RLV_RS09930	COG1120	ATPase activity
RLV_RS09975	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RLV_RS09980	COG1640	4-alpha-glucanotransferase
RLV_RS10030	COG2909	trisaccharide binding
RLV_RS10035	COG1609	Transcriptional regulator
RLV_RS10040	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS10055	COG2972	Histidine kinase
RLV_RS10055	COG0840	transmembrane signaling receptor activity
RLV_RS10070	COG0392	lysyltransferase activity
RLV_RS10075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RLV_RS10090	COG0697	spore germination
RLV_RS10095	COG2814	Major facilitator Superfamily
RLV_RS10105	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RLV_RS10145	COG1129	ABC transporter
RLV_RS10150	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS10160	COG0667	Aldo Keto reductase
RLV_RS10165	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RLV_RS10175	COG1070	Carbohydrate kinase
RLV_RS10185	COG1278	Cold shock
RLV_RS10205	COG0583	DNA-binding transcription factor activity
RLV_RS10210	COG2855	membrane
RLV_RS10225	COG2030	dehydratase
RLV_RS10235	COG2986	histidine ammonia-lyase
RLV_RS10255	COG1174	glycine betaine transport
RLV_RS10260	COG1174	glycine betaine transport
RLV_RS10280	COG3842	ATPase activity
RLV_RS10290	COG1175	transmembrane transport
RLV_RS10295	COG0395	ABC-type sugar transport system, permease component
RLV_RS10320	COG1129	ABC transporter
RLV_RS10325	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS10330	COG1737	Transcriptional regulator
RLV_RS10335	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS10340	COG4608	Belongs to the ABC transporter superfamily
RLV_RS10345	COG0444	Belongs to the ABC transporter superfamily
RLV_RS10350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS10355	COG0601	transmembrane transport
RLV_RS10360	COG0747	negative chemotaxis
RLV_RS10365	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS10370	COG3386	PFAM SMP-30 Gluconolaconase
RLV_RS10375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS10380	COG2186	Transcriptional regulator
RLV_RS10385	COG0747	negative chemotaxis
RLV_RS10390	COG0601	transmembrane transport
RLV_RS10395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS10400	COG4172	Belongs to the ABC transporter superfamily
RLV_RS10405	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS10435	COG4566	intracellular signal transduction
RLV_RS10440	COG0745	RESPONSE REGULATOR receiver
RLV_RS10445	COG4566	intracellular signal transduction
RLV_RS10450	COG4191	Histidine kinase
RLV_RS10510	COG4191	Histidine kinase
RLV_RS10520	COG2235	arginine
RLV_RS10535	COG0531	amino acid
RLV_RS10555	COG1982	Orn Lys Arg decarboxylase major
RLV_RS10560	COG0531	amino acid
RLV_RS10585	COG0628	permease
RLV_RS10615	COG2954	triphosphatase activity
RLV_RS10635	COG1192	Involved in chromosome partitioning
RLV_RS10640	COG1475	DNA binding
RLV_RS10645	COG1414	Transcriptional regulator
RLV_RS10655	COG0670	Belongs to the BI1 family
RLV_RS10690	COG4953	penicillin-binding protein 1C
RLV_RS10700	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RLV_RS10715	COG0784	Response regulator, receiver
RLV_RS10725	COG2814	Major facilitator Superfamily
RLV_RS10735	COG1609	Transcriptional regulator
RLV_RS10740	COG1609	Transcriptional regulator
RLV_RS10750	COG1132	(ABC) transporter
RLV_RS10755	COG1132	(ABC) transporter
RLV_RS10770	COG4191	Histidine kinase
RLV_RS10770	COG0784	Response regulator, receiver
RLV_RS10775	COG3346	SURF1 family
RLV_RS10780	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
RLV_RS10785	COG1845	cytochrome c oxidase, subunit III
RLV_RS10790	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RLV_RS10795	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RLV_RS10800	COG0477	Major facilitator Superfamily
RLV_RS10810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RLV_RS10810	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RLV_RS10815	COG1132	(ABC) transporter
RLV_RS10835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS10845	COG0747	negative chemotaxis
RLV_RS10850	COG4172	Belongs to the ABC transporter superfamily
RLV_RS10875	COG5265	(ABC) transporter
RLV_RS10885	COG1959	2 iron, 2 sulfur cluster binding
RLV_RS10910	COG0714	Associated with various cellular activities
RLV_RS10940	COG0438	transferase activity, transferring glycosyl groups
RLV_RS10950	COG0596	Alpha beta hydrolase
RLV_RS10960	COG1234	tRNA 3'-trailer cleavage
RLV_RS10975	COG3185	4-Hydroxyphenylpyruvate dioxygenase
RLV_RS10975	COG1082	Xylose isomerase domain protein TIM barrel
RLV_RS10985	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RLV_RS10990	COG0765	amino acid transport
RLV_RS10995	COG0765	amino acid transport
RLV_RS11000	COG1126	abc transporter atp-binding protein
RLV_RS11010	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RLV_RS11015	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS11025	COG3485	protocatechuate 3,4-dioxygenase
RLV_RS11030	COG3485	protocatechuate 3,4-dioxygenase
RLV_RS11035	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RLV_RS11040	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RLV_RS11045	COG0583	DNA-binding transcription factor activity
RLV_RS11055	COG5654	RES domain protein
RLV_RS11095	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS11095	COG1672	PFAM Archaeal ATPase
RLV_RS11120	COG4943	cyclic-guanylate-specific phosphodiesterase activity
RLV_RS11155	COG0577	efflux transmembrane transporter activity
RLV_RS11165	COG0730	response to heat
RLV_RS11225	COG0484	heat shock protein binding
RLV_RS11235	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
RLV_RS11245	COG2986	histidine ammonia-lyase
RLV_RS11250	COG1228	amidohydrolase
RLV_RS11255	COG0402	S-adenosylhomocysteine deaminase activity
RLV_RS11285	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RLV_RS11315	COG2986	histidine ammonia-lyase
RLV_RS11345	COG3119	arylsulfatase activity
RLV_RS11355	COG4566	intracellular signal transduction
RLV_RS11365	COG0671	phosphoesterase, PA-phosphatase related
RLV_RS11400	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
RLV_RS11430	COG1486	melibiose metabolic process
RLV_RS11435	COG0747	negative chemotaxis
RLV_RS11440	COG0601	transmembrane transport
RLV_RS11445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS11450	COG4172	Belongs to the ABC transporter superfamily
RLV_RS11455	COG1486	melibiose metabolic process
RLV_RS11530	COG0628	permease
RLV_RS11565	COG4566	intracellular signal transduction
RLV_RS11570	COG4566	intracellular signal transduction
RLV_RS11595	COG1126	abc transporter atp-binding protein
RLV_RS11660	COG2813	Specifically methylates the guanine in position
RLV_RS11670	COG3831	ATPase activity
RLV_RS11680	COG4608	Belongs to the ABC transporter superfamily
RLV_RS11715	COG1858	cytochrome C peroxidase
RLV_RS11720	COG3511	phospholipase C
RLV_RS11725	COG1414	Transcriptional regulator
RLV_RS11735	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
RLV_RS11740	COG0183	Belongs to the thiolase family
RLV_RS11795	COG0784	Response regulator, receiver
RLV_RS11795	COG4191	Histidine kinase
RLV_RS11805	COG1573	uracil-dna glycosylase
RLV_RS11825	COG3831	ATPase activity
RLV_RS11860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS11860	COG3453	Protein conserved in bacteria
RLV_RS11865	COG0640	Transcriptional regulator
RLV_RS11900	COG2217	Heavy metal translocating P-type atpase
RLV_RS11945	COG0784	Response regulator, receiver
RLV_RS11945	COG4191	Histidine kinase
RLV_RS11950	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RLV_RS11965	COG0071	Belongs to the small heat shock protein (HSP20) family
RLV_RS11975	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
RLV_RS11985	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
RLV_RS11990	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
RLV_RS12050	COG0745	RESPONSE REGULATOR receiver
RLV_RS12055	COG2205	protein histidine kinase activity
RLV_RS12060	COG1725	Transcriptional regulator
RLV_RS12065	COG0626	cystathionine gamma-synthase activity
RLV_RS12080	COG0395	ABC-type sugar transport system, permease component
RLV_RS12085	COG3842	ATPase activity
RLV_RS12090	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
RLV_RS12105	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RLV_RS12110	COG4208	sulfate ABC transporter
RLV_RS12120	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
RLV_RS12140	COG2205	protein histidine kinase activity
RLV_RS12145	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
RLV_RS12150	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
RLV_RS12155	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
RLV_RS12170	COG1063	alcohol dehydrogenase
RLV_RS12180	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RLV_RS12190	COG0583	DNA-binding transcription factor activity
RLV_RS12205	COG1960	acyl-CoA dehydrogenase activity
RLV_RS12250	COG3547	Transposase (IS116 IS110 IS902 family)
RLV_RS12280	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS12300	COG1349	DNA-binding transcription factor activity
RLV_RS12305	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS12305	COG3347	Dehydrogenase
RLV_RS12315	COG4952	isomerase
RLV_RS12320	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RLV_RS12325	COG1595	DNA-templated transcription, initiation
RLV_RS12330	COG3964	amidohydrolase
RLV_RS12350	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS12390	COG3119	arylsulfatase activity
RLV_RS12395	COG0583	DNA-binding transcription factor activity
RLV_RS12415	COG4608	Belongs to the ABC transporter superfamily
RLV_RS12420	COG0444	Belongs to the ABC transporter superfamily
RLV_RS12425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS12440	COG1472	Belongs to the glycosyl hydrolase 3 family
RLV_RS12455	COG0352	thiamine-phosphate diphosphorylase activity
RLV_RS12470	COG2831	hemolysin activation secretion protein
RLV_RS12485	COG3210	domain, Protein
RLV_RS12570	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS12590	COG0747	negative chemotaxis
RLV_RS12595	COG0601	transmembrane transport
RLV_RS12610	COG1921	L-seryl-tRNASec selenium transferase activity
RLV_RS12615	COG4172	Belongs to the ABC transporter superfamily
RLV_RS12630	COG3257	ureidoglycine aminohydrolase activity
RLV_RS12650	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
RLV_RS12690	COG1017	nitric oxide dioxygenase activity
RLV_RS12690	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RLV_RS12695	COG3663	DNA glycosylase
RLV_RS12710	COG1473	amidohydrolase
RLV_RS12715	COG4166	transmembrane transport
RLV_RS12725	COG4172	Belongs to the ABC transporter superfamily
RLV_RS12730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS12735	COG0601	transmembrane transport
RLV_RS12740	COG0583	DNA-binding transcription factor activity
RLV_RS12760	COG0673	inositol 2-dehydrogenase activity
RLV_RS12770	COG0395	ABC-type sugar transport system, permease component
RLV_RS12780	COG3842	ATPase activity
RLV_RS12790	COG0640	Transcriptional regulator
RLV_RS12815	COG1737	Transcriptional regulator
RLV_RS12845	COG3321	synthase
RLV_RS12845	COG0604	alcohol dehydrogenase
RLV_RS12850	COG0300	oxidoreductase activity
RLV_RS12870	COG4172	Belongs to the ABC transporter superfamily
RLV_RS12875	COG0444	Belongs to the ABC transporter superfamily
RLV_RS12880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS12885	COG0601	transmembrane transport
RLV_RS12905	COG3459	Glycosyltransferase 36 associated
RLV_RS12910	COG2186	Transcriptional regulator
RLV_RS12915	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS12920	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
RLV_RS12935	COG2205	protein histidine kinase activity
RLV_RS12940	COG0745	RESPONSE REGULATOR receiver
RLV_RS12945	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
RLV_RS12950	COG0596	Alpha beta hydrolase
RLV_RS12965	COG0667	Aldo Keto reductase
RLV_RS12970	COG1280	lysine exporter protein (LysE YggA)
RLV_RS12975	COG2207	Transcriptional regulator
RLV_RS12985	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RLV_RS12990	COG1278	Cold shock
RLV_RS13010	COG2894	cell division
RLV_RS13015	COG0850	regulation of cytokinetic process
RLV_RS13020	COG0840	transmembrane signaling receptor activity
RLV_RS13035	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
RLV_RS13045	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RLV_RS13060	COG0069	glutamate synthase activity
RLV_RS13065	COG2218	PFAM glutamate synthase alpha subunit domain protein
RLV_RS13070	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RLV_RS13080	COG4977	sequence-specific DNA binding
RLV_RS13085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS13090	COG4311	Sarcosine oxidase, delta subunit
RLV_RS13095	COG0446	pyridine nucleotide-disulphide oxidoreductase
RLV_RS13095	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RLV_RS13195	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS13200	COG2267	carboxylic ester hydrolase activity
RLV_RS13225	COG0583	DNA-binding transcription factor activity
RLV_RS13250	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RLV_RS13330	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS13335	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS13350	COG1396	sequence-specific DNA binding
RLV_RS13385	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
RLV_RS13390	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
RLV_RS13400	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
RLV_RS13420	COG1609	Transcriptional regulator
RLV_RS13480	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RLV_RS13485	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
RLV_RS13495	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
RLV_RS13500	COG1420	regulation of RNA biosynthetic process
RLV_RS13505	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
RLV_RS13515	COG0071	Belongs to the small heat shock protein (HSP20) family
RLV_RS13535	COG0220	tRNA (guanine-N7-)-methyltransferase activity
RLV_RS13540	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
RLV_RS13545	COG1396	sequence-specific DNA binding
RLV_RS13550	COG0815	Transfers the fatty acyl group on membrane lipoproteins
RLV_RS13555	COG4535	Mg2 and Co2 transporter CorC
RLV_RS13560	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
RLV_RS13565	COG1702	phosphate starvation-inducible protein PhoH
RLV_RS13570	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RLV_RS13595	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
RLV_RS13605	COG0180	Tryptophanyl-tRNA synthetase
RLV_RS13635	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
RLV_RS13640	COG0280	phosphate acetyltransferase
RLV_RS13640	COG0281	malic enzyme
RLV_RS13660	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
RLV_RS13665	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RLV_RS13670	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
RLV_RS13670	COG0116	Belongs to the methyltransferase superfamily
RLV_RS13695	COG0776	regulation of translation
RLV_RS13700	COG0616	signal peptide processing
RLV_RS13700	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
RLV_RS13710	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
RLV_RS13715	COG1137	ATPase activity
RLV_RS13730	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
RLV_RS13735	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RLV_RS13740	COG0840	transmembrane signaling receptor activity
RLV_RS13750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS13760	COG0840	transmembrane signaling receptor activity
RLV_RS13775	COG0242	peptide deformylase activity
RLV_RS13790	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
RLV_RS13795	COG0101	tRNA pseudouridine synthase activity
RLV_RS13805	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RLV_RS13810	COG2171	N-acyltransferase activity
RLV_RS13835	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RLV_RS13835	COG2169	Transcriptional regulator
RLV_RS13845	COG1304	FMN binding
RLV_RS13850	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
RLV_RS13855	COG5484	DNA packaging
RLV_RS13865	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
RLV_RS13870	COG3920	Histidine kinase
RLV_RS13885	COG1278	Cold shock
RLV_RS13890	COG0218	Necessary for normal cell division and for the maintenance of normal septation
RLV_RS13895	COG0706	membrane insertase activity
RLV_RS13900	COG0594	ribonuclease P activity
RLV_RS13905	COG0230	Belongs to the bacterial ribosomal protein bL34 family
RLV_RS13910	COG0840	transmembrane signaling receptor activity
RLV_RS13950	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RLV_RS13990	COG2130	NADP-dependent
RLV_RS14000	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
RLV_RS14005	COG1309	transcriptional regulator
RLV_RS14010	COG0667	Aldo Keto reductase
RLV_RS14030	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS14035	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS14040	COG3938	Belongs to the proline racemase family
RLV_RS14045	COG1309	transcriptional regulator
RLV_RS14050	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS14065	COG1309	transcriptional regulator
RLV_RS14075	COG3300	MHYT domain
RLV_RS14075	COG5001	Diguanylate cyclase
RLV_RS14105	COG1940	carbohydrate kinase activity
RLV_RS14125	COG1072	(Pantothenic acid kinase))
RLV_RS14130	COG0418	dihydroorotase activity
RLV_RS14145	COG0625	glutathione transferase activity
RLV_RS14160	COG1309	transcriptional regulator
RLV_RS14165	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
RLV_RS14175	COG0166	Belongs to the GPI family
RLV_RS14180	COG0318	PFAM AMP-dependent synthetase and ligase
RLV_RS14190	COG3250	beta-galactosidase activity
RLV_RS14200	COG1174	glycine betaine transport
RLV_RS14205	COG1125	glycine betaine transport
RLV_RS14210	COG1174	glycine betaine transport
RLV_RS14215	COG1732	Glycine betaine
RLV_RS14225	COG0583	DNA-binding transcription factor activity
RLV_RS14230	COG3142	Participates in the control of copper homeostasis
RLV_RS14235	COG3385	transposase activity
RLV_RS14245	COG1063	alcohol dehydrogenase
RLV_RS14250	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS14275	COG2721	sulfolactate sulfo-lyase activity
RLV_RS14295	COG4178	(ABC) transporter
RLV_RS14315	COG2226	methyltransferase
RLV_RS14335	COG0477	Major facilitator Superfamily
RLV_RS14370	COG2010	Cytochrome c
RLV_RS14385	COG3278	Belongs to the heme-copper respiratory oxidase family
RLV_RS14405	COG2326	polyphosphate kinase activity
RLV_RS14410	COG5002	protein histidine kinase activity
RLV_RS14415	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RLV_RS14420	COG0573	inorganic phosphate transmembrane transporter activity
RLV_RS14430	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RLV_RS14435	COG0704	Plays a role in the regulation of phosphate uptake
RLV_RS14440	COG0745	RESPONSE REGULATOR receiver
RLV_RS14450	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RLV_RS14455	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
RLV_RS14460	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
RLV_RS14465	COG2967	ApaG domain
RLV_RS14475	COG0717	Belongs to the dCTP deaminase family
RLV_RS14495	COG0840	transmembrane signaling receptor activity
RLV_RS14500	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS14535	COG0167	dihydroorotate dehydrogenase activity
RLV_RS14540	COG0534	Mate efflux family protein
RLV_RS14565	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RLV_RS14570	COG3547	Transposase (IS116 IS110 IS902 family)
RLV_RS14575	COG1959	2 iron, 2 sulfur cluster binding
RLV_RS14585	COG1201	RNA secondary structure unwinding
RLV_RS14610	COG0730	response to heat
RLV_RS14640	COG1960	acyl-CoA dehydrogenase activity
RLV_RS14645	COG0183	Belongs to the thiolase family
RLV_RS14655	COG1024	Enoyl-CoA hydratase
RLV_RS14655	COG1250	3-hydroxyacyl-CoA dehydrogenase
RLV_RS14665	COG1278	Cold shock
RLV_RS14695	COG2205	protein histidine kinase activity
RLV_RS14695	COG0784	Response regulator, receiver
RLV_RS14695	COG2198	Histidine kinase
RLV_RS14700	COG1970	mechanosensitive ion channel activity
RLV_RS14705	COG0436	Aminotransferase
RLV_RS14715	COG5001	Diguanylate cyclase
RLV_RS14760	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
RLV_RS14770	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RLV_RS14775	COG5328	Belongs to the UPF0262 family
RLV_RS14780	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RLV_RS14785	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
RLV_RS14790	COG0424	maF-like protein
RLV_RS14795	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
RLV_RS14840	COG0179	Fumarylacetoacetate (FAA) hydrolase
RLV_RS14850	COG1609	Transcriptional regulator
RLV_RS14875	COG0148	phosphopyruvate hydratase activity
RLV_RS14885	COG0683	leucine binding
RLV_RS14890	COG1063	alcohol dehydrogenase
RLV_RS14895	COG0431	NADPH-dependent FMN reductase
RLV_RS14905	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RLV_RS14910	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
RLV_RS14915	COG0583	DNA-binding transcription factor activity
RLV_RS14920	COG1960	acyl-CoA dehydrogenase activity
RLV_RS14925	COG1250	3-hydroxyacyl-CoA dehydrogenase
RLV_RS14945	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS14950	COG3842	ATPase activity
RLV_RS14960	COG0395	ABC-type sugar transport system, permease component
RLV_RS14965	COG1175	transmembrane transport
RLV_RS14975	COG1082	Xylose isomerase domain protein TIM barrel
RLV_RS14980	COG1940	carbohydrate kinase activity
RLV_RS14985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS14990	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
RLV_RS15000	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS15010	COG0673	inositol 2-dehydrogenase activity
RLV_RS15035	COG1609	Transcriptional regulator
RLV_RS15045	COG2072	flavoprotein involved in K transport
RLV_RS15055	COG0438	transferase activity, transferring glycosyl groups
RLV_RS15060	COG2144	transferase activity, transferring acyl groups
RLV_RS15085	COG0596	Alpha beta hydrolase
RLV_RS15120	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
RLV_RS15125	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
RLV_RS15155	COG0346	lactoylglutathione lyase activity
RLV_RS15160	COG4251	negative regulation of phosphorylation
RLV_RS15170	COG4251	negative regulation of phosphorylation
RLV_RS15180	COG2197	response regulator
RLV_RS15205	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RLV_RS15205	COG4651	solute:proton antiporter activity
RLV_RS15215	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RLV_RS15220	COG0840	transmembrane signaling receptor activity
RLV_RS15230	COG0745	RESPONSE REGULATOR receiver
RLV_RS15235	COG0643	Histidine kinase
RLV_RS15235	COG2198	Histidine kinase
RLV_RS15240	COG0835	chemotaxis
RLV_RS15245	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
RLV_RS15250	COG2201	protein-glutamate methylesterase activity
RLV_RS15255	COG0745	RESPONSE REGULATOR receiver
RLV_RS15260	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
RLV_RS15270	COG1766	The M ring may be actively involved in energy transduction
RLV_RS15275	COG2771	luxR family
RLV_RS15290	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RLV_RS15295	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
RLV_RS15300	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
RLV_RS15305	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
RLV_RS15310	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
RLV_RS15315	COG4786	Flagellar basal body rod
RLV_RS15320	COG1157	protein secretion by the type III secretion system
RLV_RS15330	COG1815	bacterial-type flagellum-dependent cell motility
RLV_RS15335	COG1558	bacterial-type flagellum-dependent cell motility
RLV_RS15340	COG1677	Flagellar hook-basal body complex protein FliE
RLV_RS15345	COG4786	Flagellar basal body rod
RLV_RS15350	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
RLV_RS15355	COG1706	bacterial-type flagellum-dependent cell motility
RLV_RS15365	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
RLV_RS15375	COG1338	Plays a role in the flagellum-specific transport system
RLV_RS15400	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RLV_RS15410	COG1360	Flagellar Motor Protein
RLV_RS15435	COG1749	Flagellar hook protein flgE
RLV_RS15455	COG5443	negative regulation of bacterial-type flagellum assembly
RLV_RS15465	COG4794	Type iii secretion
RLV_RS15470	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RLV_RS15475	COG1684	flagellar biosynthetic protein fliR
RLV_RS15500	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RLV_RS15515	COG1609	Transcriptional regulator
RLV_RS15520	COG1653	transport
RLV_RS15525	COG1175	transmembrane transport
RLV_RS15530	COG0395	ABC-type sugar transport system, permease component
RLV_RS15535	COG0366	Alpha amylase catalytic
RLV_RS15540	COG3842	ATPase activity
RLV_RS15550	COG0129	dihydroxy-acid dehydratase activity
RLV_RS15555	COG0363	glucosamine-6-phosphate deaminase activity
RLV_RS15560	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
RLV_RS15565	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS15575	COG2081	HI0933 family
RLV_RS15580	COG0840	transmembrane signaling receptor activity
RLV_RS15580	COG2972	Histidine kinase
RLV_RS15585	COG0840	transmembrane signaling receptor activity
RLV_RS15605	COG2224	Isocitrate lyase
RLV_RS15620	COG3842	ATPase activity
RLV_RS15625	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS15630	COG1177	transmembrane transport
RLV_RS15640	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RLV_RS15645	COG2205	protein histidine kinase activity
RLV_RS15705	COG1959	2 iron, 2 sulfur cluster binding
RLV_RS15710	COG0747	negative chemotaxis
RLV_RS15715	COG0601	transmembrane transport
RLV_RS15720	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS15725	COG0444	Belongs to the ABC transporter superfamily
RLV_RS15730	COG4608	Belongs to the ABC transporter superfamily
RLV_RS15735	COG3265	gluconokinase activity
RLV_RS15740	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS15745	COG1755	Isoprenylcysteine carboxyl methyltransferase
RLV_RS15770	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
RLV_RS15775	COG1091	dTDP-4-dehydrorhamnose reductase activity
RLV_RS15780	COG1088	dTDP-glucose 4,6-dehydratase activity
RLV_RS15785	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
RLV_RS15835	COG0463	Glycosyl transferase, family 2
RLV_RS15845	COG4106	trans-aconitate 2-methyltransferase activity
RLV_RS15870	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RLV_RS15895	COG2963	transposase activity
RLV_RS15900	COG2963	transposase activity
RLV_RS15905	COG3436	PFAM IS66 Orf2 family protein
RLV_RS15910	COG4372	Transposase
RLV_RS15925	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RLV_RS15930	COG2226	methyltransferase
RLV_RS15990	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
RLV_RS16005	COG0477	Major facilitator Superfamily
RLV_RS16010	COG1234	tRNA 3'-trailer cleavage
RLV_RS16030	COG0583	DNA-binding transcription factor activity
RLV_RS16035	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS16050	COG0583	DNA-binding transcription factor activity
RLV_RS16075	COG0306	phosphate transporter
RLV_RS16090	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
RLV_RS16095	COG3321	synthase
RLV_RS16095	COG4221	oxidoreductase activity
RLV_RS16095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
RLV_RS16095	COG0604	alcohol dehydrogenase
RLV_RS16105	COG0583	DNA-binding transcription factor activity
RLV_RS16110	COG0277	FAD linked oxidase domain protein
RLV_RS16115	COG0277	FAD linked oxidase domain protein
RLV_RS16120	COG0247	lactate metabolic process
RLV_RS16135	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS16135	COG1388	LysM domain
RLV_RS16140	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS16145	COG2818	Glycosylase
RLV_RS16160	COG0667	Aldo Keto reductase
RLV_RS16180	COG0124	histidyl-tRNA synthetase
RLV_RS16185	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
RLV_RS16190	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
RLV_RS16195	COG2259	Doxx family
RLV_RS16200	COG0625	glutathione transferase activity
RLV_RS16215	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
RLV_RS16225	COG0196	riboflavin kinase activity
RLV_RS16240	COG0590	tRNA wobble adenosine to inosine editing
RLV_RS16245	COG1187	pseudouridine synthase activity
RLV_RS16250	COG0742	ribosomal rna small subunit methyltransferase
RLV_RS16280	COG0312	modulator of DNA gyrase
RLV_RS16285	COG0483	inositol monophosphate 1-phosphatase activity
RLV_RS16295	COG1519	Transferase
RLV_RS16305	COG1663	tetraacyldisaccharide 4'-kinase activity
RLV_RS16315	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS16335	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
RLV_RS16340	COG0745	RESPONSE REGULATOR receiver
RLV_RS16345	COG5001	Diguanylate cyclase
RLV_RS16345	COG3300	MHYT domain
RLV_RS16355	COG3386	PFAM SMP-30 Gluconolaconase
RLV_RS16360	COG0800	Aldolase
RLV_RS16365	COG3734	2-keto-3-deoxy-galactonokinase
RLV_RS16370	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS16375	COG1414	Transcriptional regulator
RLV_RS16380	COG2197	response regulator
RLV_RS16385	COG0489	protein tyrosine kinase activity
RLV_RS16395	COG0598	Magnesium transport protein CorA
RLV_RS16400	COG3158	transport of potassium into the cell
RLV_RS16415	COG0356	it plays a direct role in the translocation of protons across the membrane
RLV_RS16425	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
RLV_RS16430	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
RLV_RS16435	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
RLV_RS16455	COG0521	Mo-molybdopterin cofactor biosynthetic process
RLV_RS16460	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
RLV_RS16470	COG0142	geranyltranstransferase activity
RLV_RS16485	COG1914	H( )-stimulated, divalent metal cation uptake system
RLV_RS16500	COG0752	glycyl-tRNA synthetase alpha subunit
RLV_RS16505	COG1704	LemA family
RLV_RS16510	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
RLV_RS16520	COG0151	Belongs to the GarS family
RLV_RS16535	COG0840	transmembrane signaling receptor activity
RLV_RS16540	COG1683	Conserved Protein
RLV_RS16545	COG0751	glycine-tRNA ligase activity
RLV_RS16550	COG2183	response to ionizing radiation
RLV_RS16555	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RLV_RS16570	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RLV_RS16590	COG0009	L-threonylcarbamoyladenylate synthase
RLV_RS16605	COG4638	Rieske (2fe-2S)
RLV_RS16620	COG1960	acyl-CoA dehydrogenase activity
RLV_RS16635	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
RLV_RS16650	COG0840	transmembrane signaling receptor activity
RLV_RS16660	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
RLV_RS16665	COG1741	Belongs to the pirin family
RLV_RS16675	COG1722	exodeoxyribonuclease VII activity
RLV_RS16680	COG0123	including yeast histone deacetylase and acetoin utilization protein
RLV_RS16745	COG0596	Alpha beta hydrolase
RLV_RS16755	COG1268	BioY protein
RLV_RS16760	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
RLV_RS16765	COG1122	ATPase activity
RLV_RS16770	COG3214	Protein conserved in bacteria
RLV_RS16775	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RLV_RS16775	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RLV_RS16780	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
RLV_RS16800	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
RLV_RS16805	COG0484	heat shock protein binding
RLV_RS16815	COG0259	pyridoxamine-phosphate oxidase activity
RLV_RS16825	COG1686	Belongs to the peptidase S11 family
RLV_RS16840	COG0312	modulator of DNA gyrase
RLV_RS16850	COG1565	acr, cog1565
RLV_RS16850	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RLV_RS16855	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RLV_RS16860	COG0109	protoheme IX farnesyltransferase activity
RLV_RS16865	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
RLV_RS16885	COG3346	SURF1 family
RLV_RS16890	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
RLV_RS16895	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
RLV_RS16900	COG0328	RNA-DNA hybrid ribonuclease activity
RLV_RS16920	COG1678	Uncharacterized ACR, COG1678
RLV_RS16930	COG0678	peroxiredoxin activity
RLV_RS16930	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RLV_RS16935	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RLV_RS16940	COG2814	Major facilitator Superfamily
RLV_RS16945	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS16965	COG3485	protocatechuate 3,4-dioxygenase
RLV_RS16985	COG1902	pentaerythritol trinitrate reductase activity
RLV_RS16995	COG0667	Aldo Keto reductase
RLV_RS17010	COG4221	oxidoreductase activity
RLV_RS17025	COG0300	oxidoreductase activity
RLV_RS17050	COG2072	flavoprotein involved in K transport
RLV_RS17055	COG1126	abc transporter atp-binding protein
RLV_RS17060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS17065	COG0765	amino acid transport
RLV_RS17085	COG1121	(ABC) transporter
RLV_RS17090	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RLV_RS17095	COG0803	Belongs to the bacterial solute-binding protein 9 family
RLV_RS17155	COG1960	acyl-CoA dehydrogenase activity
RLV_RS17180	COG0612	Peptidase, M16
RLV_RS17200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RLV_RS17205	COG2972	Histidine kinase
RLV_RS17205	COG0840	transmembrane signaling receptor activity
RLV_RS17235	COG2189	Belongs to the N(4) N(6)-methyltransferase family
RLV_RS17250	COG1194	a g-specific adenine glycosylase
RLV_RS17275	COG1196	nuclear chromosome segregation
RLV_RS17285	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RLV_RS17285	COG0574	Belongs to the PEP-utilizing enzyme family
RLV_RS17415	COG0285	dihydrofolate synthase activity
RLV_RS17520	COG3385	transposase activity
RLV_RS17545	COG3119	arylsulfatase activity
RLV_RS17560	COG3415	Transposase
RLV_RS17570	COG1309	transcriptional regulator
RLV_RS17595	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS17610	COG0583	DNA-binding transcription factor activity
RLV_RS17625	COG0640	Transcriptional regulator
RLV_RS17635	COG0740	serine-type endopeptidase activity
RLV_RS17645	COG2226	methyltransferase
RLV_RS17650	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RLV_RS17665	COG2863	cytochrome
RLV_RS17670	COG2207	Transcriptional regulator
RLV_RS17670	COG1917	Cupin 2, conserved barrel domain protein
RLV_RS17695	COG0251	oxidation-reduction process
RLV_RS17705	COG3119	arylsulfatase activity
RLV_RS17745	COG0259	pyridoxamine-phosphate oxidase activity
RLV_RS17750	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS17755	COG0583	DNA-binding transcription factor activity
RLV_RS17780	COG0640	Transcriptional regulator
RLV_RS17785	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS17800	COG0702	epimerase
RLV_RS17830	COG0625	glutathione transferase activity
RLV_RS17840	COG0640	Transcriptional regulator
RLV_RS17895	COG0300	oxidoreductase activity
RLV_RS17905	COG1309	transcriptional regulator
RLV_RS17920	COG0590	tRNA wobble adenosine to inosine editing
RLV_RS17935	COG0235	Class ii aldolase
RLV_RS17945	COG0784	Response regulator, receiver
RLV_RS17945	COG4191	Histidine kinase
RLV_RS17960	COG3384	dioxygenase
RLV_RS18000	COG1902	pentaerythritol trinitrate reductase activity
RLV_RS18020	COG0640	Transcriptional regulator
RLV_RS18035	COG1506	peptidase
RLV_RS18035	COG0823	Involved in the tonB-independent uptake of proteins
RLV_RS18065	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
RLV_RS18150	COG1609	Transcriptional regulator
RLV_RS18155	COG0583	DNA-binding transcription factor activity
RLV_RS18165	COG0583	DNA-binding transcription factor activity
RLV_RS18185	COG0438	transferase activity, transferring glycosyl groups
RLV_RS18250	COG2895	sulfate adenylyltransferase (ATP) activity
RLV_RS18255	COG0175	sulfate reduction
RLV_RS18260	COG0175	sulfate reduction
RLV_RS18265	COG1959	2 iron, 2 sulfur cluster binding
RLV_RS18290	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
RLV_RS18295	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS18300	COG1309	transcriptional regulator
RLV_RS18315	COG4943	cyclic-guanylate-specific phosphodiesterase activity
RLV_RS18320	COG3321	synthase
RLV_RS18320	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS18320	COG0604	alcohol dehydrogenase
RLV_RS18325	COG2226	methyltransferase
RLV_RS18385	COG0583	DNA-binding transcription factor activity
RLV_RS18390	COG0435	Glutathione S-transferase
RLV_RS18415	COG0584	glycerophosphoryl diester phosphodiesterase
RLV_RS18420	COG0596	Alpha beta hydrolase
RLV_RS18430	COG1793	dna ligase
RLV_RS18440	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS18445	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS18450	COG1278	Cold shock
RLV_RS18460	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RLV_RS18470	COG1846	Transcriptional regulator
RLV_RS18475	COG1764	response to oxidative stress
RLV_RS18500	COG0488	(ABC) transporter
RLV_RS18510	COG0488	(ABC) transporter
RLV_RS18515	COG0433	COG0433 Predicted ATPase
RLV_RS18530	COG3609	addiction module antidote protein, CC2985 family
RLV_RS18535	COG1051	belongs to the nudix hydrolase family
RLV_RS18545	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
RLV_RS18550	COG4106	trans-aconitate 2-methyltransferase activity
RLV_RS18555	COG1253	flavin adenine dinucleotide binding
RLV_RS18560	COG0840	transmembrane signaling receptor activity
RLV_RS18580	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RLV_RS18605	COG1064	alcohol dehydrogenase
RLV_RS18610	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RLV_RS18620	COG0583	DNA-binding transcription factor activity
RLV_RS18645	COG0625	glutathione transferase activity
RLV_RS18655	COG2814	Major facilitator Superfamily
RLV_RS18665	COG0730	response to heat
RLV_RS18680	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
RLV_RS18695	COG1280	lysine exporter protein (LysE YggA)
RLV_RS18705	COG2010	Cytochrome c
RLV_RS18740	COG4993	Dehydrogenase
RLV_RS18745	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
RLV_RS18750	COG0477	Major facilitator Superfamily
RLV_RS18800	COG2514	catechol 2,3-dioxygenase activity
RLV_RS18810	COG1272	protein, Hemolysin III
RLV_RS18815	COG1247	-acetyltransferase
RLV_RS18830	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RLV_RS18840	COG2111	Na H antiporter
RLV_RS18840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
RLV_RS18845	COG2111	Na H antiporter
RLV_RS18850	COG1006	Multisubunit Na H antiporter MnhC subunit
RLV_RS18855	COG0651	ATP synthesis coupled electron transport
RLV_RS18860	COG1863	multisubunit Na H antiporter MnhE subunit
RLV_RS18865	COG2212	antiporter activity
RLV_RS18870	COG1320	monovalent cation:proton antiporter activity
RLV_RS18875	COG4957	zinc ion binding
RLV_RS18880	COG2166	iron-sulfur cluster assembly
RLV_RS18890	COG2205	protein histidine kinase activity
RLV_RS18900	COG2207	Transcriptional regulator
RLV_RS18940	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
RLV_RS18945	COG2983	Belongs to the UPF0260 family
RLV_RS18955	COG4221	oxidoreductase activity
RLV_RS18960	COG3239	Fatty acid desaturase
RLV_RS18980	COG0583	DNA-binding transcription factor activity
RLV_RS19015	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
RLV_RS19020	COG0459	protein refolding
RLV_RS19030	COG0673	inositol 2-dehydrogenase activity
RLV_RS19040	COG1082	Xylose isomerase domain protein TIM barrel
RLV_RS19045	COG1609	Transcriptional regulator
RLV_RS19050	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RLV_RS19055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RLV_RS19070	COG0625	glutathione transferase activity
RLV_RS19085	COG1309	transcriptional regulator
RLV_RS19125	COG4235	cytochrome complex assembly
RLV_RS19135	COG1138	Cytochrome C-type biogenesis protein
RLV_RS19140	COG3088	subunit of a heme lyase
RLV_RS19155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RLV_RS19160	COG0745	RESPONSE REGULATOR receiver
RLV_RS19165	COG2205	protein histidine kinase activity
RLV_RS19170	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
RLV_RS19180	COG2205	protein histidine kinase activity
RLV_RS19180	COG2202	Pas domain
RLV_RS19185	COG0308	aminopeptidase N
RLV_RS19190	COG3290	protein histidine kinase activity
RLV_RS19190	COG0840	transmembrane signaling receptor activity
RLV_RS19220	COG0443	Heat shock 70 kDa protein
RLV_RS19250	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS19265	COG2239	Acts as a magnesium transporter
RLV_RS19275	COG1733	regulation of RNA biosynthetic process
RLV_RS19280	COG2814	Major facilitator Superfamily
RLV_RS19290	COG0174	glutamine synthetase
RLV_RS19315	COG4964	Belongs to the GSP D family
RLV_RS19365	COG2255	four-way junction helicase activity
RLV_RS19390	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RLV_RS19395	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RLV_RS19400	COG0463	Glycosyl transferase, family 2
RLV_RS19405	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
RLV_RS19415	COG4941	Belongs to the sigma-70 factor family
RLV_RS19425	COG3795	YCII-related domain
RLV_RS19430	COG3795	YCII-related domain
RLV_RS19440	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
RLV_RS19460	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RLV_RS19515	COG3718	enzyme involved in inositol metabolism
RLV_RS19525	COG3962	Belongs to the TPP enzyme family
RLV_RS19530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS19540	COG0673	inositol 2-dehydrogenase activity
RLV_RS19625	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS19630	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
RLV_RS19640	COG1758	RNA polymerase activity
RLV_RS19660	COG0736	holo-[acyl-carrier-protein] synthase activity
RLV_RS19665	COG0681	Belongs to the peptidase S26 family
RLV_RS19670	COG0571	ribonuclease III activity
RLV_RS19675	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
RLV_RS19680	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RLV_RS19690	COG1381	Involved in DNA repair and RecF pathway recombination
RLV_RS19695	COG0656	L-ascorbic acid biosynthetic process
RLV_RS19705	COG1418	mRNA catabolic process
RLV_RS19710	COG5001	Diguanylate cyclase
RLV_RS19710	COG3300	MHYT domain
RLV_RS19720	COG2032	superoxide dismutase activity
RLV_RS19725	COG0668	transmembrane transport
RLV_RS19735	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
RLV_RS19740	COG0354	folic acid binding
RLV_RS19760	COG1051	belongs to the nudix hydrolase family
RLV_RS19765	COG1742	UPF0060 membrane protein
RLV_RS19775	COG1183	phosphatidylcholine synthase activity
RLV_RS19780	COG0688	phosphatidylethanolamine metabolic process
RLV_RS19785	COG5265	(ABC) transporter
RLV_RS19805	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RLV_RS19830	COG0215	cysteine-tRNA ligase activity
RLV_RS19840	COG4221	oxidoreductase activity
RLV_RS19845	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RLV_RS19850	COG1286	toxin biosynthetic process
RLV_RS19860	COG1280	lysine exporter protein (LysE YggA)
RLV_RS19865	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RLV_RS19885	COG0305	Participates in initiation and elongation during chromosome replication
RLV_RS19890	COG0359	binds to the 23S rRNA
RLV_RS19900	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
RLV_RS19905	COG0360	Binds together with S18 to 16S ribosomal RNA
RLV_RS19910	COG0667	Aldo Keto reductase
RLV_RS19920	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RLV_RS19930	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RLV_RS19935	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RLV_RS19940	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
RLV_RS19945	COG1561	YicC-like family, N-terminal region
RLV_RS19950	COG0194	GDP metabolic process
RLV_RS19955	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
RLV_RS19960	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
RLV_RS19970	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
RLV_RS19985	COG0671	phosphoesterase, PA-phosphatase related
RLV_RS19990	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
RLV_RS20010	COG1505	serine-type exopeptidase activity
RLV_RS20015	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS20020	COG2079	MmgE PrpD family protein
RLV_RS20025	COG1126	abc transporter atp-binding protein
RLV_RS20030	COG0765	amino acid transport
RLV_RS20050	COG0488	(ABC) transporter
RLV_RS20070	COG0105	UTP biosynthetic process
RLV_RS20090	COG0314	molybdopterin synthase activity
RLV_RS20100	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RLV_RS20105	COG0322	excinuclease ABC activity
RLV_RS20110	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS20125	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
RLV_RS20130	COG0243	molybdopterin cofactor binding
RLV_RS20150	COG3454	Phosphonate metabolism
RLV_RS20155	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
RLV_RS20160	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
RLV_RS20165	COG0628	permease
RLV_RS20175	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
RLV_RS20190	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS20195	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
RLV_RS20200	COG2132	Multicopper oxidase
RLV_RS20210	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
RLV_RS20220	COG1309	transcriptional regulator
RLV_RS20230	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
RLV_RS20240	COG3654	unkown
RLV_RS20245	COG2336	PFAM SpoVT AbrB
RLV_RS20255	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
RLV_RS20265	COG0113	porphobilinogen synthase activity
RLV_RS20285	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
RLV_RS20290	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
RLV_RS20295	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RLV_RS20295	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
RLV_RS20320	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
RLV_RS20325	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RLV_RS20330	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
RLV_RS20355	COG0416	fatty acid biosynthetic process
RLV_RS20360	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RLV_RS20365	COG0776	regulation of translation
RLV_RS20395	COG1215	transferase activity, transferring glycosyl groups
RLV_RS20405	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
RLV_RS20415	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RLV_RS20425	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RLV_RS20450	COG1940	carbohydrate kinase activity
RLV_RS20460	COG0456	acetyltransferase
RLV_RS20460	COG0454	-acetyltransferase
RLV_RS20470	COG1175	transmembrane transport
RLV_RS20475	COG0395	ABC-type sugar transport system, permease component
RLV_RS20490	COG0297	glycogen (starch) synthase activity
RLV_RS20515	COG1612	heme a metabolic process
RLV_RS20525	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
RLV_RS20530	COG0010	Belongs to the arginase family
RLV_RS20540	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
RLV_RS20545	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
RLV_RS20560	COG1024	Enoyl-CoA hydratase
RLV_RS20575	COG1832	CoA-binding protein
RLV_RS20605	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RLV_RS20635	COG5001	Diguanylate cyclase
RLV_RS20645	COG2124	cytochrome p450
RLV_RS20650	COG3706	GGDEF domain
RLV_RS20655	COG0740	serine-type endopeptidase activity
RLV_RS20660	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
RLV_RS20665	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
RLV_RS20670	COG0776	regulation of translation
RLV_RS20675	COG0697	spore germination
RLV_RS20685	COG0667	Aldo Keto reductase
RLV_RS20705	COG0386	Belongs to the glutathione peroxidase family
RLV_RS20735	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS20740	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS20745	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS20750	COG0649	NAD binding
RLV_RS20760	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
RLV_RS20765	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
RLV_RS20770	COG3743	rRNA binding
RLV_RS20770	COG0261	This protein binds to 23S rRNA in the presence of protein L20
RLV_RS20780	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
RLV_RS20785	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS20810	COG1007	ATP synthesis coupled electron transport
RLV_RS20815	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
RLV_RS20815	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
RLV_RS20825	COG0346	lactoylglutathione lyase activity
RLV_RS20840	COG0442	prolyl-tRNA aminoacylation
RLV_RS20850	COG1136	(ABC) transporter
RLV_RS20870	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RLV_RS20890	COG0784	Response regulator, receiver
RLV_RS20900	COG0267	Belongs to the bacterial ribosomal protein bL33 family
RLV_RS20905	COG0477	Major facilitator Superfamily
RLV_RS20915	COG0557	exoribonuclease II activity
RLV_RS20920	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RLV_RS20925	COG0758	DNA mediated transformation
RLV_RS20930	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
RLV_RS20940	COG0540	Belongs to the ATCase OTCase family
RLV_RS20945	COG1960	acyl-CoA dehydrogenase activity
RLV_RS20955	COG1530	ribonuclease E activity
RLV_RS20960	COG0860	N-Acetylmuramoyl-L-alanine amidase
RLV_RS20965	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
RLV_RS20985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
RLV_RS21060	COG0582	viral genome integration into host DNA
RLV_RS21070	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RLV_RS21085	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
RLV_RS21090	COG1086	Polysaccharide biosynthesis protein
RLV_RS21100	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
RLV_RS21110	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
RLV_RS21115	COG0081	regulation of translation
RLV_RS21120	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
RLV_RS21125	COG0222	ribosome binding
RLV_RS21130	COG0085	RNA polymerase activity
RLV_RS21135	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
RLV_RS21145	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
RLV_RS21150	COG0049	tRNA binding
RLV_RS21155	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RLV_RS21160	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
RLV_RS21165	COG0051	transcription antitermination factor activity, RNA binding
RLV_RS21170	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
RLV_RS21175	COG0088	Forms part of the polypeptide exit tunnel
RLV_RS21180	COG0089	rRNA binding
RLV_RS21185	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
RLV_RS21190	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
RLV_RS21195	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
RLV_RS21200	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
RLV_RS21205	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
RLV_RS21210	COG0255	Belongs to the universal ribosomal protein uL29 family
RLV_RS21215	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
RLV_RS21220	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
RLV_RS21225	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
RLV_RS21230	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
RLV_RS21235	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
RLV_RS21240	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
RLV_RS21245	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
RLV_RS21250	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
RLV_RS21255	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
RLV_RS21260	COG1841	ribosomal large subunit assembly
RLV_RS21265	COG0200	Binds to the 23S rRNA
RLV_RS21275	COG0563	adenylate kinase activity
RLV_RS21280	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
RLV_RS21285	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
RLV_RS21290	COG0202	RNA polymerase activity
RLV_RS21295	COG0203	ribosomal protein L17
RLV_RS21300	COG4372	Transposase
RLV_RS21305	COG3436	PFAM IS66 Orf2 family protein
RLV_RS21310	COG2963	transposase activity
RLV_RS21320	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
RLV_RS21325	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RLV_RS21330	COG0129	dihydroxy-acid dehydratase activity
RLV_RS21350	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RLV_RS21375	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS21380	COG0596	Alpha beta hydrolase
RLV_RS21385	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
RLV_RS21390	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS21395	COG0583	DNA-binding transcription factor activity
RLV_RS21410	COG5002	protein histidine kinase activity
RLV_RS21420	COG2271	Major facilitator Superfamily
RLV_RS21425	COG1473	amidohydrolase
RLV_RS21435	COG1609	Transcriptional regulator
RLV_RS21445	COG1024	Enoyl-CoA hydratase
RLV_RS21450	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS21455	COG1653	transport
RLV_RS21460	COG1175	transmembrane transport
RLV_RS21465	COG0395	ABC-type sugar transport system, permease component
RLV_RS21470	COG3842	ATPase activity
RLV_RS21485	COG0673	inositol 2-dehydrogenase activity
RLV_RS21490	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
RLV_RS21520	COG2197	response regulator
RLV_RS21570	COG1522	sequence-specific DNA binding
RLV_RS21575	COG1522	sequence-specific DNA binding
RLV_RS21585	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
RLV_RS21595	COG0625	glutathione transferase activity
RLV_RS21615	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RLV_RS21625	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
RLV_RS21635	COG1546	Belongs to the CinA family
RLV_RS21635	COG1058	Belongs to the CinA family
RLV_RS21640	COG0655	NAD(P)H dehydrogenase (quinone) activity
RLV_RS21655	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RLV_RS21665	COG3706	GGDEF domain
RLV_RS21685	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
RLV_RS21690	COG0583	DNA-binding transcription factor activity
RLV_RS21695	COG0737	Belongs to the 5'-nucleotidase family
RLV_RS21715	COG1522	sequence-specific DNA binding
RLV_RS21720	COG0686	Belongs to the AlaDH PNT family
RLV_RS21730	COG4221	oxidoreductase activity
RLV_RS21760	COG2897	thiosulfate sulfurtransferase activity
RLV_RS21775	COG3806	Anti-sigma factor
RLV_RS21780	COG0300	oxidoreductase activity
RLV_RS21785	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RLV_RS21800	COG0415	Belongs to the DNA photolyase family
RLV_RS21815	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RLV_RS21820	COG0243	molybdopterin cofactor binding
RLV_RS21830	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RLV_RS21840	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS21845	COG3707	response regulator
RLV_RS21865	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS21870	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
RLV_RS21870	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
RLV_RS21875	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
RLV_RS21885	COG0450	alkyl hydroperoxide reductase
RLV_RS21890	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RLV_RS21895	COG0625	glutathione transferase activity
RLV_RS21920	COG3842	ATPase activity
RLV_RS21925	COG1177	transmembrane transport
RLV_RS21930	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS21940	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
RLV_RS21970	COG0753	catalase activity
RLV_RS22020	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
RLV_RS22030	COG0525	valine-tRNA ligase activity
RLV_RS22055	COG0316	Belongs to the HesB IscA family
RLV_RS22060	COG0232	Belongs to the dGTPase family. Type 2 subfamily
RLV_RS22065	COG0018	arginyl-trna synthetase
RLV_RS22075	COG1472	Belongs to the glycosyl hydrolase 3 family
RLV_RS22080	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
RLV_RS22085	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
RLV_RS22090	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
RLV_RS22095	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
RLV_RS22100	COG0805	protein transport
RLV_RS22105	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
RLV_RS22110	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RLV_RS22115	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
RLV_RS22130	COG1862	Preprotein translocase
RLV_RS22155	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
RLV_RS22185	COG0544	peptidyl-prolyl cis-trans isomerase activity
RLV_RS22195	COG1032	radical SAM domain protein
RLV_RS22210	COG2003	Belongs to the UPF0758 family
RLV_RS22215	COG0024	Methionine aminopeptidase
RLV_RS22230	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
RLV_RS22240	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
RLV_RS22245	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
RLV_RS22250	COG0154	amidase activity
RLV_RS22265	COG3811	Belongs to the UPF0386 family
RLV_RS22280	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
RLV_RS22300	COG4765	Protein conserved in bacteria
RLV_RS22310	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
RLV_RS22320	COG0511	ligase activity, forming carbon-carbon bonds
RLV_RS22325	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RLV_RS22340	COG0436	Aminotransferase
RLV_RS22350	COG3243	poly(R)-hydroxyalkanoic acid synthase
RLV_RS22360	COG0436	Aminotransferase
RLV_RS22375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RLV_RS22415	COG1278	Cold shock
RLV_RS22445	COG3420	alginic acid biosynthetic process
RLV_RS22490	COG1262	PFAM Formylglycine-generating sulfatase enzyme
RLV_RS22540	COG1126	abc transporter atp-binding protein
RLV_RS22545	COG0765	amino acid transport
RLV_RS22550	COG4597	amino acid ABC transporter
RLV_RS22555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS22560	COG0626	cystathionine gamma-synthase activity
RLV_RS22575	COG2267	carboxylic ester hydrolase activity
RLV_RS22595	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
RLV_RS22605	COG0537	adenosine 5'-monophosphoramidase activity
RLV_RS22630	COG0052	Belongs to the universal ribosomal protein uS2 family
RLV_RS22635	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
RLV_RS22640	COG0528	UMP kinase activity
RLV_RS22645	COG0233	cytoplasmic translational termination
RLV_RS22650	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
RLV_RS22660	COG0750	zinc metalloprotease
RLV_RS22665	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RLV_RS22670	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RLV_RS22675	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RLV_RS22680	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RLV_RS22685	COG3494	Protein of unknown function (DUF1009)
RLV_RS22690	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
RLV_RS22705	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RLV_RS22715	COG2877	3-deoxy-8-phosphooctulonate synthase activity
RLV_RS22720	COG0148	phosphopyruvate hydratase activity
RLV_RS22730	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
RLV_RS22735	COG0022	dehydrogenase e1 component
RLV_RS22735	COG0508	dehydrogenase complex catalyzes the overall conversion of
RLV_RS22740	COG0508	dehydrogenase complex catalyzes the overall conversion of
RLV_RS22755	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RLV_RS22770	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
RLV_RS22780	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
RLV_RS22785	COG2867	negative regulation of translational initiation
RLV_RS22790	COG1058	Belongs to the CinA family
RLV_RS22790	COG1546	Belongs to the CinA family
RLV_RS22795	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
RLV_RS22795	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
RLV_RS22810	COG2204	response regulator
RLV_RS22840	COG0667	Aldo Keto reductase
RLV_RS22845	COG5000	phosphorelay sensor kinase activity
RLV_RS22850	COG2204	response regulator
RLV_RS22855	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RLV_RS22860	COG1923	regulation of RNA biosynthetic process
RLV_RS22865	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
RLV_RS22870	COG3956	TIGRFAM MazG family protein
RLV_RS22880	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RLV_RS22880	COG1648	precorrin-2 dehydrogenase activity
RLV_RS22890	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RLV_RS22900	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RLV_RS22905	COG0679	Auxin Efflux Carrier
RLV_RS22910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS22915	COG0785	Cytochrome C biogenesis protein
RLV_RS22935	COG3237	CsbD-like
RLV_RS22945	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RLV_RS23020	COG1653	transport
RLV_RS23025	COG1175	transmembrane transport
RLV_RS23030	COG0395	ABC-type sugar transport system, permease component
RLV_RS23035	COG3842	ATPase activity
RLV_RS23055	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS23060	COG1312	Catalyzes the dehydration of D-mannonate
RLV_RS23065	COG2186	Transcriptional regulator
RLV_RS23075	COG0601	transmembrane transport
RLV_RS23080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS23085	COG0444	Belongs to the ABC transporter superfamily
RLV_RS23090	COG4608	Belongs to the ABC transporter superfamily
RLV_RS23110	COG1175	transmembrane transport
RLV_RS23115	COG0395	ABC-type sugar transport system, permease component
RLV_RS23195	COG1566	PFAM secretion protein HlyD family protein
RLV_RS23200	COG1136	(ABC) transporter
RLV_RS23200	COG0577	efflux transmembrane transporter activity
RLV_RS23205	COG1136	(ABC) transporter
RLV_RS23205	COG0577	efflux transmembrane transporter activity
RLV_RS23225	COG1183	phosphatidylcholine synthase activity
RLV_RS23235	COG3845	ABC transporter
RLV_RS23245	COG1079	Belongs to the binding-protein-dependent transport system permease family
RLV_RS23255	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS23260	COG1129	ABC transporter
RLV_RS23265	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS23270	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS23275	COG2186	Transcriptional regulator
RLV_RS23280	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
RLV_RS23285	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
RLV_RS23295	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RLV_RS23305	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
RLV_RS23320	COG4166	transmembrane transport
RLV_RS23335	COG0174	glutamine synthetase
RLV_RS23340	COG0347	Belongs to the P(II) protein family
RLV_RS23345	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
RLV_RS23345	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
RLV_RS23350	COG2354	Protein conserved in bacteria
RLV_RS23365	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
RLV_RS23370	COG0629	single-stranded DNA binding
RLV_RS23375	COG2095	MarC family integral membrane protein
RLV_RS23380	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
RLV_RS23390	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
RLV_RS23405	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
RLV_RS23410	COG0343	queuine tRNA-ribosyltransferase activity
RLV_RS23420	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RLV_RS23465	COG0612	Peptidase, M16
RLV_RS23490	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
RLV_RS23520	COG0028	Belongs to the TPP enzyme family
RLV_RS23530	COG1609	Transcriptional regulator
RLV_RS23540	COG1129	ABC transporter
RLV_RS23545	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS23550	COG0668	transmembrane transport
RLV_RS23555	COG0596	Alpha beta hydrolase
RLV_RS23570	COG0583	DNA-binding transcription factor activity
RLV_RS23580	COG1984	allophanate hydrolase subunit 2
RLV_RS23590	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
RLV_RS23605	COG3174	membrane
RLV_RS23620	COG0861	Integral membrane protein TerC family
RLV_RS23625	COG0321	lipoyl(octanoyl) transferase activity
RLV_RS23625	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
RLV_RS23630	COG0084	hydrolase, TatD family'
RLV_RS23635	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RLV_RS23640	COG0730	response to heat
RLV_RS23650	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
RLV_RS23705	COG2824	Alkylphosphonate utilization operon protein PhnA
RLV_RS23740	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
RLV_RS23745	COG0134	indole-3-glycerol-phosphate synthase activity
RLV_RS23750	COG0315	cyclic pyranopterin monophosphate synthase activity
RLV_RS23755	COG0303	'Molybdopterin
RLV_RS23770	COG2153	protein acetylation
RLV_RS23775	COG0513	Belongs to the DEAD box helicase family
RLV_RS23790	COG0372	Belongs to the citrate synthase family
RLV_RS23795	COG0372	Belongs to the citrate synthase family
RLV_RS23805	COG0504	CTP synthase activity
RLV_RS23815	COG0149	triose-phosphate isomerase activity
RLV_RS23825	COG0187	DNA topoisomerase II activity
RLV_RS23835	COG0628	permease
RLV_RS23870	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
RLV_RS23880	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
RLV_RS23890	COG0302	gtp cyclohydrolase
RLV_RS23895	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
RLV_RS23900	COG1752	Esterase of the alpha-beta hydrolase superfamily
RLV_RS23925	COG2267	carboxylic ester hydrolase activity
RLV_RS23940	COG1686	Belongs to the peptidase S11 family
RLV_RS23955	COG1760	l-serine dehydratase
RLV_RS23970	COG0698	ribose 5-phosphate isomerase
RLV_RS23990	COG2239	Acts as a magnesium transporter
RLV_RS23995	COG0242	peptide deformylase activity
RLV_RS24015	COG0321	lipoyl(octanoyl) transferase activity
RLV_RS24035	COG4770	biotin carboxylase activity
RLV_RS24040	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
RLV_RS24050	COG1671	Belongs to the UPF0178 family
RLV_RS24060	COG2259	Doxx family
RLV_RS24065	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
RLV_RS24080	COG0546	phosphoglycolate phosphatase activity
RLV_RS24090	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
RLV_RS24115	COG0509	glycine decarboxylation via glycine cleavage system
RLV_RS24120	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RLV_RS24120	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RLV_RS24145	COG0243	molybdopterin cofactor binding
RLV_RS24155	COG0316	Belongs to the HesB IscA family
RLV_RS24160	COG2151	metal-sulfur cluster biosynthetic enzyme
RLV_RS24165	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RLV_RS24170	COG0719	Fe-S assembly protein
RLV_RS24175	COG0396	ATPase activity
RLV_RS24185	COG0719	Fe-S assembly protein
RLV_RS24190	COG1104	cysteine desulfurase activity
RLV_RS24195	COG2945	thiolester hydrolase activity
RLV_RS24210	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
RLV_RS24215	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
RLV_RS24230	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
RLV_RS24235	COG2833	Protein of unknown function (DUF455)
RLV_RS24240	COG1196	nuclear chromosome segregation
RLV_RS24240	COG0741	lytic transglycosylase activity
RLV_RS24240	COG0739	heme binding
RLV_RS24245	COG0513	Belongs to the DEAD box helicase family
RLV_RS24260	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RLV_RS24285	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
RLV_RS24310	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
RLV_RS24315	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RLV_RS24320	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
RLV_RS24325	COG0047	phosphoribosylformylglycinamidine synthase activity
RLV_RS24340	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RLV_RS24350	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RLV_RS24375	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
RLV_RS24380	COG2814	Major facilitator Superfamily
RLV_RS24385	COG2814	Major facilitator Superfamily
RLV_RS24395	COG0454	-acetyltransferase
RLV_RS24400	COG0483	inositol monophosphate 1-phosphatase activity
RLV_RS24405	COG0483	inositol monophosphate 1-phosphatase activity
RLV_RS24410	COG0037	tRNA processing
RLV_RS24415	COG2066	Belongs to the glutaminase family
RLV_RS24420	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
RLV_RS24430	COG2223	nitrite transmembrane transporter activity
RLV_RS24435	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
RLV_RS24440	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
RLV_RS24455	COG0538	isocitrate dehydrogenase activity
RLV_RS24475	COG1280	lysine exporter protein (LysE YggA)
RLV_RS24480	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
RLV_RS24485	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
RLV_RS24495	COG2313	pseudouridylate synthase activity
RLV_RS24530	COG3106	COG3106 Predicted ATPase
RLV_RS24535	COG3768	UPF0283 membrane protein
RLV_RS24545	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RLV_RS24555	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RLV_RS24565	COG0633	Ferredoxin
RLV_RS24590	COG1686	Belongs to the peptidase S11 family
RLV_RS24610	COG1127	ABC transporter
RLV_RS24620	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS24625	COG2814	Major facilitator Superfamily
RLV_RS24640	COG0588	phosphoglycerate mutase activity
RLV_RS24650	COG0280	phosphate acetyltransferase
RLV_RS24650	COG0281	malic enzyme
RLV_RS24660	COG0328	RNA-DNA hybrid ribonuclease activity
RLV_RS24670	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS24675	COG0384	phenazine biosynthesis protein PhzF
RLV_RS24690	COG0778	Nitroreductase
RLV_RS24695	COG0477	Major facilitator Superfamily
RLV_RS24700	COG0840	transmembrane signaling receptor activity
RLV_RS24710	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
RLV_RS24715	COG0823	Involved in the tonB-independent uptake of proteins
RLV_RS24745	COG1132	(ABC) transporter
RLV_RS24750	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
RLV_RS24775	COG1254	Belongs to the acylphosphatase family
RLV_RS24785	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
RLV_RS24790	COG0546	phosphoglycolate phosphatase activity
RLV_RS24795	COG2989	Protein conserved in bacteria
RLV_RS24800	COG0114	fumarate hydratase activity
RLV_RS24810	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
RLV_RS24810	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
RLV_RS24850	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
RLV_RS24855	COG2226	methyltransferase
RLV_RS24865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RLV_RS24870	COG1120	ATPase activity
RLV_RS24875	COG2390	Transcriptional regulator
RLV_RS24880	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RLV_RS24885	COG3958	Transketolase
RLV_RS24890	COG3959	Transketolase, thiamine diphosphate binding domain
RLV_RS24895	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS24900	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS24910	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS24915	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS24920	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RLV_RS24925	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS24935	COG0746	molybdenum cofactor guanylyltransferase activity
RLV_RS24940	COG1763	Mo-molybdopterin cofactor biosynthetic process
RLV_RS24945	COG4191	Histidine kinase
RLV_RS24945	COG0784	Response regulator, receiver
RLV_RS24950	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
RLV_RS24965	COG0667	Aldo Keto reductase
RLV_RS24980	COG1764	response to oxidative stress
RLV_RS24985	COG2205	protein histidine kinase activity
RLV_RS25010	COG1349	DNA-binding transcription factor activity
RLV_RS25015	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
RLV_RS25020	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS25030	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS25045	COG5425	PFAM Usg family protein
RLV_RS25060	COG0625	glutathione transferase activity
RLV_RS25100	COG1116	anion transmembrane transporter activity
RLV_RS25105	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS25110	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS25120	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS25130	COG2084	Dehydrogenase
RLV_RS25140	COG0583	DNA-binding transcription factor activity
RLV_RS25155	COG1522	sequence-specific DNA binding
RLV_RS25160	COG1573	uracil-dna glycosylase
RLV_RS25170	COG2202	Pas domain
RLV_RS25170	COG2205	protein histidine kinase activity
RLV_RS25180	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
RLV_RS25185	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
RLV_RS25210	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS25215	COG0842	Transport permease protein
RLV_RS25220	COG1131	(ABC) transporter
RLV_RS25225	COG3507	Belongs to the glycosyl hydrolase 43 family
RLV_RS25230	COG0667	Aldo Keto reductase
RLV_RS25255	COG0395	ABC-type sugar transport system, permease component
RLV_RS25260	COG1175	transmembrane transport
RLV_RS25275	COG0495	leucyl-tRNA aminoacylation
RLV_RS25280	COG0583	DNA-binding transcription factor activity
RLV_RS25310	COG3153	acetyltransferase
RLV_RS25320	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
RLV_RS25355	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RLV_RS25365	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RLV_RS25370	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RLV_RS25485	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS25490	COG1492	cobalamin metabolic process
RLV_RS25510	COG0583	DNA-binding transcription factor activity
RLV_RS25525	COG0583	DNA-binding transcription factor activity
RLV_RS25535	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
RLV_RS25555	COG0668	transmembrane transport
RLV_RS25595	COG0745	RESPONSE REGULATOR receiver
RLV_RS25620	COG0640	Transcriptional regulator
RLV_RS25625	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
RLV_RS25635	COG0431	NADPH-dependent FMN reductase
RLV_RS25650	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
RLV_RS25650	COG3264	Mechanosensitive ion channel
RLV_RS25660	COG0745	RESPONSE REGULATOR receiver
RLV_RS25665	COG2814	Major facilitator Superfamily
RLV_RS25680	COG1175	transmembrane transport
RLV_RS25685	COG0395	ABC-type sugar transport system, permease component
RLV_RS25700	COG3842	ATPase activity
RLV_RS25710	COG1461	Dihydroxyacetone kinase
RLV_RS25715	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
RLV_RS25735	COG2376	Dihydroxyacetone kinase
RLV_RS25750	COG2249	NAD(P)H dehydrogenase (quinone) activity
RLV_RS25760	COG0596	Alpha beta hydrolase
RLV_RS25770	COG2186	Transcriptional regulator
RLV_RS25785	COG2375	cellular response to nickel ion
RLV_RS25790	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS25795	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RLV_RS25800	COG0765	amino acid transport
RLV_RS25810	COG1126	abc transporter atp-binding protein
RLV_RS25815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS25825	COG1846	Transcriptional regulator
RLV_RS25830	COG0596	Alpha beta hydrolase
RLV_RS25835	COG0494	nUDIX hydrolase
RLV_RS25845	COG1764	response to oxidative stress
RLV_RS25850	COG2226	methyltransferase
RLV_RS25875	COG1607	acyl-coa hydrolase
RLV_RS25910	COG0667	Aldo Keto reductase
RLV_RS25930	COG2814	Major facilitator Superfamily
RLV_RS25945	COG4221	oxidoreductase activity
RLV_RS25955	COG0583	DNA-binding transcription factor activity
RLV_RS26005	COG3152	Membrane
RLV_RS26025	COG3387	PFAM Glycoside hydrolase 15-related
RLV_RS26040	COG0556	nucleotide-excision repair
RLV_RS26045	COG0456	acetyltransferase
RLV_RS26070	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RLV_RS26075	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RLV_RS26115	COG2755	lipolytic protein G-D-S-L family
RLV_RS26115	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
RLV_RS26135	COG3850	Histidine kinase
RLV_RS26135	COG5002	protein histidine kinase activity
RLV_RS26145	COG0431	NADPH-dependent FMN reductase
RLV_RS26150	COG0842	Transport permease protein
RLV_RS26150	COG1129	ABC transporter
RLV_RS26195	COG0667	Aldo Keto reductase
RLV_RS26215	COG0702	epimerase
RLV_RS26225	COG1522	sequence-specific DNA binding
RLV_RS26230	COG0137	argininosuccinate synthase activity
RLV_RS26240	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
RLV_RS26250	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RLV_RS26260	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
RLV_RS26270	COG1132	(ABC) transporter
RLV_RS26300	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
RLV_RS26330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RLV_RS26345	COG0738	Major facilitator superfamily
RLV_RS26355	COG2814	Major facilitator Superfamily
RLV_RS26360	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
RLV_RS26365	COG3158	transport of potassium into the cell
RLV_RS26370	COG0025	NhaP-type Na H and K H
RLV_RS26390	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RLV_RS26395	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
RLV_RS26435	COG0697	spore germination
RLV_RS26450	COG0577	efflux transmembrane transporter activity
RLV_RS26450	COG1136	(ABC) transporter
RLV_RS26455	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RLV_RS26465	COG2207	Transcriptional regulator
RLV_RS26465	COG1917	Cupin 2, conserved barrel domain protein
RLV_RS26495	COG0833	amino acid
RLV_RS26520	COG1845	cytochrome c oxidase, subunit III
RLV_RS26525	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
RLV_RS26530	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
RLV_RS26565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RLV_RS26580	COG3453	Protein conserved in bacteria
RLV_RS26580	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS26600	COG2201	protein-glutamate methylesterase activity
RLV_RS26630	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RLV_RS26635	COG0667	Aldo Keto reductase
RLV_RS26680	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RLV_RS26705	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS26750	COG0662	Cupin 2, conserved barrel domain protein
RLV_RS26755	COG0583	DNA-binding transcription factor activity
RLV_RS26760	COG3300	MHYT domain
RLV_RS26760	COG5001	Diguanylate cyclase
RLV_RS26770	COG2226	methyltransferase
RLV_RS26775	COG2208	phosphoserine phosphatase activity
RLV_RS26805	COG0501	Belongs to the peptidase M48B family
RLV_RS26835	COG0395	ABC-type sugar transport system, permease component
RLV_RS26850	COG1846	Transcriptional regulator
RLV_RS26850	COG1940	carbohydrate kinase activity
RLV_RS26865	COG2329	Antibiotic biosynthesis monooxygenase
RLV_RS26870	COG0697	spore germination
RLV_RS26875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RLV_RS26880	COG0840	transmembrane signaling receptor activity
RLV_RS26890	COG2204	response regulator
RLV_RS26895	COG5002	protein histidine kinase activity
RLV_RS26900	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RLV_RS26930	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RLV_RS26940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS26970	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS27095	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RLV_RS27100	COG1121	(ABC) transporter
RLV_RS27110	COG0523	cobalamin synthesis protein
RLV_RS27130	COG1253	flavin adenine dinucleotide binding
RLV_RS27165	COG0384	phenazine biosynthesis protein PhzF
RLV_RS27185	COG3842	ATPase activity
RLV_RS27190	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS27200	COG0667	Aldo Keto reductase
RLV_RS27205	COG5634	Uncharacterized conserved protein (DUF2278)
RLV_RS27210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RLV_RS27215	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RLV_RS27240	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
RLV_RS27255	COG2207	Transcriptional regulator
RLV_RS27260	COG1064	alcohol dehydrogenase
RLV_RS27275	COG1252	NADH dehydrogenase
RLV_RS27280	COG1522	sequence-specific DNA binding
RLV_RS27285	COG1794	racemase activity, acting on amino acids and derivatives
RLV_RS27290	COG1846	Transcriptional regulator
RLV_RS27290	COG0456	acetyltransferase
RLV_RS27295	COG1309	transcriptional regulator
RLV_RS27300	COG2814	Major facilitator Superfamily
RLV_RS27305	COG1733	regulation of RNA biosynthetic process
RLV_RS27315	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
RLV_RS27325	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RLV_RS27355	COG0668	transmembrane transport
RLV_RS27365	COG1846	Transcriptional regulator
RLV_RS27425	COG0656	L-ascorbic acid biosynthetic process
RLV_RS27435	COG0440	acetolactate synthase activity
RLV_RS27440	COG0028	Belongs to the TPP enzyme family
RLV_RS27450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS27465	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
RLV_RS27470	COG0560	Phosphoserine phosphatase
RLV_RS27480	COG0330	HflC and HflK could
RLV_RS27485	COG0330	HflC and HflK could
RLV_RS27495	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
RLV_RS27530	COG0277	FAD linked oxidase domain protein
RLV_RS27535	COG0667	Aldo Keto reductase
RLV_RS27540	COG0583	DNA-binding transcription factor activity
RLV_RS27545	COG3180	Ammonia monooxygenase
RLV_RS27560	COG2885	chlorophyll binding
RLV_RS27565	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RLV_RS27570	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RLV_RS27585	COG2719	SpoVR family
RLV_RS27590	COG2718	Belongs to the UPF0229 family
RLV_RS27595	COG2766	serine protein kinase
RLV_RS27620	COG1335	isochorismatase
RLV_RS27645	COG0006	proline dipeptidase activity
RLV_RS27650	COG2264	protein methyltransferase activity
RLV_RS27655	COG1999	signal sequence binding
RLV_RS27665	COG0835	chemotaxis
RLV_RS27685	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
RLV_RS27700	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
RLV_RS27710	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RLV_RS27715	COG0849	cell division
RLV_RS27720	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
RLV_RS27725	COG1181	Belongs to the D-alanine--D-alanine ligase family
RLV_RS27730	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
RLV_RS27735	COG0477	Major facilitator Superfamily
RLV_RS27745	COG0812	UDP-N-acetylmuramate dehydrogenase activity
RLV_RS27750	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
RLV_RS27755	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
RLV_RS27765	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
RLV_RS27770	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RLV_RS27780	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RLV_RS27795	COG0275	rRNA processing
RLV_RS27800	COG2001	Belongs to the MraZ family
RLV_RS27825	COG3023	N-Acetylmuramoyl-L-alanine amidase
RLV_RS27830	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
RLV_RS27840	COG1280	lysine exporter protein (LysE YggA)
RLV_RS27865	COG3757	hydrolase, family 25
RLV_RS27905	COG0697	spore germination
RLV_RS27910	COG1804	L-carnitine dehydratase bile acid-inducible protein F
RLV_RS27915	COG0028	Belongs to the TPP enzyme family
RLV_RS27920	COG0251	oxidation-reduction process
RLV_RS27935	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS27940	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS27945	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS27950	COG1116	anion transmembrane transporter activity
RLV_RS27955	COG1192	Involved in chromosome partitioning
RLV_RS27970	COG0174	glutamine synthetase
RLV_RS28000	COG2011	ABC-type metal ion transport system permease component
RLV_RS28005	COG3842	ATPase activity
RLV_RS28020	COG0673	inositol 2-dehydrogenase activity
RLV_RS28025	COG0395	ABC-type sugar transport system, permease component
RLV_RS28030	COG1175	transmembrane transport
RLV_RS28040	COG2971	BadF BadG BcrA BcrD
RLV_RS28045	COG2188	Transcriptional regulator
RLV_RS28065	COG4702	Belongs to the UPF0303 family
RLV_RS28070	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
RLV_RS28080	COG0395	ABC-type sugar transport system, permease component
RLV_RS28085	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS28095	COG3842	ATPase activity
RLV_RS28215	COG2968	Membrane
RLV_RS28230	COG0432	Pfam Uncharacterised protein family UPF0047
RLV_RS28235	COG5507	3-demethylubiquinone-9 3-methyltransferase
RLV_RS28285	COG0072	phenylalanine-tRNA ligase activity
RLV_RS28285	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RLV_RS28295	COG2207	Transcriptional regulator
RLV_RS28295	COG1917	Cupin 2, conserved barrel domain protein
RLV_RS28325	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RLV_RS28335	COG1063	alcohol dehydrogenase
RLV_RS28345	COG2226	methyltransferase
RLV_RS28350	COG0514	ATP-dependent DNA helicase (RecQ)
RLV_RS28355	COG0358	DNA primase activity
RLV_RS28375	COG0505	Belongs to the CarA family
RLV_RS28385	COG0534	Mate efflux family protein
RLV_RS28395	COG0583	DNA-binding transcription factor activity
RLV_RS28400	COG0667	Aldo Keto reductase
RLV_RS28405	COG2321	neutral zinc metallopeptidase
RLV_RS28425	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
RLV_RS28430	COG1573	uracil-dna glycosylase
RLV_RS28450	COG1301	dicarboxylic acid transport
RLV_RS28455	COG4191	Histidine kinase
RLV_RS28460	COG2204	response regulator
RLV_RS28465	COG1522	sequence-specific DNA binding
RLV_RS28470	COG0492	ferredoxin-NADP+ reductase activity
RLV_RS28475	COG0583	DNA-binding transcription factor activity
RLV_RS28485	COG2814	Major facilitator Superfamily
RLV_RS28490	COG1902	pentaerythritol trinitrate reductase activity
RLV_RS28505	COG0583	DNA-binding transcription factor activity
RLV_RS28510	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
RLV_RS28510	COG0456	acetyltransferase
RLV_RS28520	COG0387	Pfam Sodium calcium exchanger
RLV_RS28530	COG1442	glycosyl transferase family 8
RLV_RS28550	COG2133	pyrroloquinoline quinone binding
RLV_RS28565	COG1278	Cold shock
RLV_RS28580	COG1733	regulation of RNA biosynthetic process
RLV_RS28590	COG0745	RESPONSE REGULATOR receiver
RLV_RS28595	COG1846	Transcriptional regulator
RLV_RS28615	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS28620	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RLV_RS28640	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
RLV_RS28665	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
RLV_RS28680	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
RLV_RS28685	COG3300	MHYT domain
RLV_RS28685	COG5001	Diguanylate cyclase
RLV_RS28695	COG0193	aminoacyl-tRNA hydrolase activity
RLV_RS28705	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
RLV_RS28730	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
RLV_RS28735	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
RLV_RS28735	COG2857	Cytochrome c1
RLV_RS28755	COG1132	(ABC) transporter
RLV_RS28765	COG1132	(ABC) transporter
RLV_RS28770	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
RLV_RS28785	COG0408	coproporphyrinogen oxidase activity
RLV_RS28800	COG0617	tRNA 3'-terminal CCA addition
RLV_RS28815	COG0714	Associated with various cellular activities
RLV_RS28835	COG0454	-acetyltransferase
RLV_RS28845	COG0435	Glutathione S-transferase
RLV_RS28880	COG1733	regulation of RNA biosynthetic process
RLV_RS28885	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RLV_RS28890	COG3135	benzoate transporter
RLV_RS28895	COG0740	serine-type endopeptidase activity
RLV_RS28900	COG3416	Protein conserved in bacteria
RLV_RS28905	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
RLV_RS28910	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
RLV_RS28930	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
RLV_RS28930	COG0512	Glutamine amidotransferase of anthranilate synthase
RLV_RS28935	COG1629	transport
RLV_RS28935	COG4771	TonB-dependent receptor
RLV_RS28950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RLV_RS28965	COG2759	Belongs to the formate--tetrahydrofolate ligase family
RLV_RS28970	COG2862	Uncharacterized protein family, UPF0114
RLV_RS28980	COG2197	response regulator
RLV_RS29000	COG1435	thymidine kinase activity
RLV_RS29015	COG4175	Glycine betaine
RLV_RS29030	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
RLV_RS29045	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
RLV_RS29050	COG0366	Alpha amylase catalytic
RLV_RS29060	COG0601	transmembrane transport
RLV_RS29065	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS29075	COG4608	Belongs to the ABC transporter superfamily
RLV_RS29085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS29095	COG0174	glutamine synthetase
RLV_RS29110	COG1846	Transcriptional regulator
RLV_RS29115	COG1160	GTP binding
RLV_RS29135	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
RLV_RS29150	COG0024	Methionine aminopeptidase
RLV_RS29165	COG4941	Belongs to the sigma-70 factor family
RLV_RS29170	COG3795	YCII-related domain
RLV_RS29175	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
RLV_RS29180	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS29190	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RLV_RS29205	COG0583	DNA-binding transcription factor activity
RLV_RS29220	COG0402	S-adenosylhomocysteine deaminase activity
RLV_RS29245	COG2267	carboxylic ester hydrolase activity
RLV_RS29250	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RLV_RS29265	COG2268	Band 7 protein
RLV_RS29275	COG2351	hydroxyisourate hydrolase activity
RLV_RS29280	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
RLV_RS29290	COG3195	allantoin biosynthetic process
RLV_RS29290	COG3648	Uricase
RLV_RS29305	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS29310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS29310	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
RLV_RS29315	COG0784	Response regulator, receiver
RLV_RS29315	COG2205	protein histidine kinase activity
RLV_RS29315	COG5002	protein histidine kinase activity
RLV_RS29325	COG0477	Major facilitator Superfamily
RLV_RS29330	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS29340	COG4335	DNA alkylation repair
RLV_RS29345	COG0513	Belongs to the DEAD box helicase family
RLV_RS29355	COG2308	Evidence 4 Homologs of previously reported genes of
RLV_RS29370	COG0129	dihydroxy-acid dehydratase activity
RLV_RS29385	COG4214	carbohydrate transport
RLV_RS29415	COG0673	inositol 2-dehydrogenase activity
RLV_RS29425	COG4213	ABC transporter substrate-binding protein
RLV_RS29430	COG4214	carbohydrate transport
RLV_RS29435	COG1129	ABC transporter
RLV_RS29455	COG3108	Peptidase M15
RLV_RS29470	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS29485	COG1216	Glycosyl transferase, family 2
RLV_RS29485	COG1442	glycosyl transferase family 8
RLV_RS29490	COG1132	(ABC) transporter
RLV_RS29495	COG1215	transferase activity, transferring glycosyl groups
RLV_RS29530	COG1396	sequence-specific DNA binding
RLV_RS29535	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RLV_RS29585	COG0463	Glycosyl transferase, family 2
RLV_RS29590	COG1215	transferase activity, transferring glycosyl groups
RLV_RS29615	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RLV_RS29620	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
RLV_RS29640	COG0489	protein tyrosine kinase activity
RLV_RS29640	COG3206	protein involved in exopolysaccharide biosynthesis
RLV_RS29665	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
RLV_RS29670	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RLV_RS29685	COG0400	carboxylic ester hydrolase activity
RLV_RS29690	COG0346	lactoylglutathione lyase activity
RLV_RS29695	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
RLV_RS29700	COG0662	Cupin 2, conserved barrel domain protein
RLV_RS29700	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
RLV_RS29715	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RLV_RS29730	COG1309	transcriptional regulator
RLV_RS29735	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RLV_RS29740	COG1131	(ABC) transporter
RLV_RS29745	COG0842	Transport permease protein
RLV_RS29750	COG0842	Transport permease protein
RLV_RS29770	COG0673	inositol 2-dehydrogenase activity
RLV_RS29780	COG2076	Multidrug Resistance protein
RLV_RS29790	COG2346	COG2346, Truncated hemoglobins
RLV_RS29840	COG4558	Periplasmic binding protein
RLV_RS29845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RLV_RS29850	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
RLV_RS29875	COG0784	Response regulator, receiver
RLV_RS29885	COG0493	'glutamate synthase
RLV_RS29895	COG4977	sequence-specific DNA binding
RLV_RS29910	COG0583	DNA-binding transcription factor activity
RLV_RS29920	COG4251	negative regulation of phosphorylation
RLV_RS29925	COG1309	transcriptional regulator
RLV_RS29955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS29960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS29965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS29985	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
RLV_RS30000	COG3706	GGDEF domain
RLV_RS30010	COG0804	urea catabolic process
RLV_RS30015	COG1442	glycosyl transferase family 8
RLV_RS30020	COG3755	Protein conserved in bacteria
RLV_RS30025	COG0832	Belongs to the urease beta subunit family
RLV_RS30030	COG3813	Protein conserved in bacteria
RLV_RS30050	COG0411	ABC transporter
RLV_RS30075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS30075	COG2205	protein histidine kinase activity
RLV_RS30090	COG0683	leucine binding
RLV_RS30115	COG0559	Belongs to the binding-protein-dependent transport system permease family
RLV_RS30200	COG0564	pseudouridine synthase activity
RLV_RS30205	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RLV_RS30215	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
RLV_RS30235	COG0129	dihydroxy-acid dehydratase activity
RLV_RS30240	COG2084	Dehydrogenase
RLV_RS30255	COG0657	acetylesterase activity
RLV_RS30265	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS30270	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS30285	COG2094	Belongs to the DNA glycosylase MPG family
RLV_RS30305	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RLV_RS30315	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
RLV_RS30325	COG1959	2 iron, 2 sulfur cluster binding
RLV_RS30330	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS30335	COG3622	Belongs to the hyi family
RLV_RS30350	COG3842	ATPase activity
RLV_RS30355	COG0395	ABC-type sugar transport system, permease component
RLV_RS30360	COG1175	transmembrane transport
RLV_RS30365	COG1653	transport
RLV_RS30370	COG1940	carbohydrate kinase activity
RLV_RS30370	COG1846	Transcriptional regulator
RLV_RS30375	COG1653	transport
RLV_RS30410	COG2244	polysaccharide biosynthetic process
RLV_RS30415	COG0438	transferase activity, transferring glycosyl groups
RLV_RS30435	COG0489	protein tyrosine kinase activity
RLV_RS30445	COG1596	polysaccharide export
RLV_RS30480	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
RLV_RS30500	COG4993	Dehydrogenase
RLV_RS30505	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS30510	COG1376	ErfK ybiS ycfS ynhG family protein
RLV_RS30535	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS30540	COG2186	Transcriptional regulator
RLV_RS30550	COG0702	epimerase
RLV_RS30555	COG1129	ABC transporter
RLV_RS30560	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS30620	COG0471	metal ion transport
RLV_RS30620	COG3273	potassium ion transport
RLV_RS30625	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
RLV_RS30630	COG1309	transcriptional regulator
RLV_RS30635	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RLV_RS30640	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
RLV_RS30660	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
RLV_RS30665	COG1473	amidohydrolase
RLV_RS30695	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
RLV_RS30720	COG3300	MHYT domain
RLV_RS30720	COG5001	Diguanylate cyclase
RLV_RS30725	COG0306	phosphate transporter
RLV_RS30730	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
RLV_RS30755	COG0683	leucine binding
RLV_RS30765	COG0559	Belongs to the binding-protein-dependent transport system permease family
RLV_RS30790	COG0482	sulfurtransferase activity
RLV_RS30795	COG5001	Diguanylate cyclase
RLV_RS30805	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
RLV_RS30825	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RLV_RS30830	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RLV_RS30835	COG0037	tRNA processing
RLV_RS30845	COG2885	chlorophyll binding
RLV_RS30850	COG0823	Involved in the tonB-independent uptake of proteins
RLV_RS30860	COG0848	biopolymer transport protein
RLV_RS30870	COG0824	Thioesterase
RLV_RS30885	COG1090	epimerase
RLV_RS30900	COG1692	metallophosphoesterase
RLV_RS30915	COG0217	transcriptional regulatory protein
RLV_RS30920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
RLV_RS30925	COG0840	transmembrane signaling receptor activity
RLV_RS30930	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
RLV_RS30935	COG0632	four-way junction helicase activity
RLV_RS30950	COG2255	four-way junction helicase activity
RLV_RS30955	COG1408	metallophosphoesterase
RLV_RS30960	COG0494	nUDIX hydrolase
RLV_RS30975	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
RLV_RS30975	COG0392	lysyltransferase activity
RLV_RS30985	COG0668	transmembrane transport
RLV_RS30990	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
RLV_RS31060	COG0126	phosphoglycerate kinase activity
RLV_RS31065	COG3588	fructose-bisphosphate aldolase
RLV_RS31070	COG0384	phenazine biosynthesis protein PhzF
RLV_RS31090	COG0254	rRNA binding
RLV_RS31095	COG1132	(ABC) transporter
RLV_RS31110	COG3422	double-strand break repair
RLV_RS31135	COG0483	inositol monophosphate 1-phosphatase activity
RLV_RS31140	COG1309	transcriptional regulator
RLV_RS31145	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS31150	COG2201	protein-glutamate methylesterase activity
RLV_RS31160	COG0835	chemotaxis
RLV_RS31170	COG0840	transmembrane signaling receptor activity
RLV_RS31175	COG0840	transmembrane signaling receptor activity
RLV_RS31180	COG0835	chemotaxis
RLV_RS31185	COG2198	Histidine kinase
RLV_RS31185	COG0643	Histidine kinase
RLV_RS31220	COG0640	Transcriptional regulator
RLV_RS31235	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
RLV_RS31240	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
RLV_RS31245	COG0257	Belongs to the bacterial ribosomal protein bL36 family
RLV_RS31250	COG0457	Tetratricopeptide repeat
RLV_RS31260	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS31280	COG4221	oxidoreductase activity
RLV_RS31295	COG0583	DNA-binding transcription factor activity
RLV_RS31300	COG1942	4-Oxalocrotonate Tautomerase
RLV_RS31315	COG1280	lysine exporter protein (LysE YggA)
RLV_RS31320	COG0469	pyruvate kinase activity
RLV_RS31340	COG3750	Belongs to the UPF0335 family
RLV_RS31345	COG3108	Peptidase M15
RLV_RS31350	COG2204	response regulator
RLV_RS31380	COG5310	Homospermidine synthase
RLV_RS31395	COG0737	Belongs to the 5'-nucleotidase family
RLV_RS31400	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
RLV_RS31405	COG0330	HflC and HflK could
RLV_RS31425	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RLV_RS31430	COG2951	lytic endotransglycosylase activity
RLV_RS31450	COG0070	glutamate synthase
RLV_RS31450	COG0069	glutamate synthase activity
RLV_RS31450	COG0067	glutamate synthase
RLV_RS31470	COG0071	Belongs to the small heat shock protein (HSP20) family
RLV_RS31565	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
RLV_RS31590	COG2308	Evidence 4 Homologs of previously reported genes of
RLV_RS31590	COG2307	Protein conserved in bacteria
RLV_RS31605	COG0058	SHG alpha-glucan phosphorylase activity
RLV_RS31610	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
RLV_RS31615	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
RLV_RS31620	COG0297	glycogen (starch) synthase activity
RLV_RS31625	COG0033	Phosphoglucomutase
RLV_RS31630	COG1523	belongs to the glycosyl hydrolase 13 family
RLV_RS31650	COG0446	pyridine nucleotide-disulphide oxidoreductase
RLV_RS31650	COG0404	The glycine cleavage system catalyzes the degradation of glycine
RLV_RS31665	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS31685	COG0828	Belongs to the bacterial ribosomal protein bS21 family
RLV_RS31695	COG3920	Histidine kinase
RLV_RS31695	COG2202	Pas domain
RLV_RS31735	COG5001	Diguanylate cyclase
RLV_RS31740	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
RLV_RS31750	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
RLV_RS31755	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
RLV_RS31760	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS31765	COG1609	Transcriptional regulator
RLV_RS31770	COG1846	Transcriptional regulator
RLV_RS31780	COG0523	cobalamin synthesis protein
RLV_RS31800	COG3706	GGDEF domain
RLV_RS31820	COG0583	DNA-binding transcription factor activity
RLV_RS31850	COG0800	Aldolase
RLV_RS31855	COG2954	triphosphatase activity
RLV_RS31870	COG1054	Belongs to the UPF0176 family
RLV_RS31890	COG0673	inositol 2-dehydrogenase activity
RLV_RS31900	COG1879	ABC-type sugar transport system periplasmic component
RLV_RS31905	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS31910	COG1129	ABC transporter
RLV_RS31915	COG1609	Transcriptional regulator
RLV_RS31920	COG2115	Belongs to the xylose isomerase family
RLV_RS31925	COG1070	Carbohydrate kinase
RLV_RS31930	COG1609	Transcriptional regulator
RLV_RS31955	COG1253	flavin adenine dinucleotide binding
RLV_RS31960	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RLV_RS31965	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
RLV_RS31980	COG0583	DNA-binding transcription factor activity
RLV_RS31985	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
RLV_RS31990	COG3842	ATPase activity
RLV_RS31995	COG1176	ABC-type spermidine putrescine transport system, permease component I
RLV_RS32000	COG1177	transmembrane transport
RLV_RS32055	COG1595	DNA-templated transcription, initiation
RLV_RS32070	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RLV_RS32090	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
RLV_RS32160	COG1940	carbohydrate kinase activity
RLV_RS32185	COG1764	response to oxidative stress
RLV_RS32190	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS32205	COG1129	ABC transporter
RLV_RS32215	COG2186	Transcriptional regulator
RLV_RS32220	COG4948	Mandelate Racemase Muconate Lactonizing
RLV_RS32230	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS32235	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
RLV_RS32250	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS32260	COG3386	PFAM SMP-30 Gluconolaconase
RLV_RS32275	COG0395	ABC-type sugar transport system, permease component
RLV_RS32280	COG1175	transmembrane transport
RLV_RS32285	COG1653	transport
RLV_RS32295	COG1609	Transcriptional regulator
RLV_RS32305	COG3842	ATPase activity
RLV_RS32310	COG0395	ABC-type sugar transport system, permease component
RLV_RS32315	COG1175	transmembrane transport
RLV_RS32320	COG1653	transport
RLV_RS32325	COG1609	Transcriptional regulator
RLV_RS32330	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
RLV_RS32335	COG0720	synthase
RLV_RS32340	COG0602	queuosine metabolic process
RLV_RS32350	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RLV_RS32360	COG1780	Probably involved in ribonucleotide reductase function
RLV_RS32365	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
RLV_RS32380	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RLV_RS32380	COG0493	'glutamate synthase
RLV_RS32385	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RLV_RS32395	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS32405	COG0693	protein deglycase activity
RLV_RS32415	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS32420	COG0387	Pfam Sodium calcium exchanger
RLV_RS32445	COG0840	transmembrane signaling receptor activity
RLV_RS32445	COG2972	Histidine kinase
RLV_RS32450	COG4178	(ABC) transporter
RLV_RS32455	COG0516	GMP reductase activity
RLV_RS32455	COG0517	IMP dehydrogenase activity
RLV_RS32460	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
RLV_RS32465	COG3459	Glycosyltransferase 36 associated
RLV_RS32475	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
RLV_RS32490	COG0713	ATP synthesis coupled electron transport
RLV_RS32495	COG0651	ATP synthesis coupled electron transport
RLV_RS32505	COG0651	ATP synthesis coupled electron transport
RLV_RS32525	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS32530	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS32535	COG0649	NAD binding
RLV_RS32560	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
RLV_RS32565	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
RLV_RS32605	COG0542	response to heat
RLV_RS32615	COG2890	protein-(glutamine-N5) methyltransferase activity
RLV_RS32620	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
RLV_RS32630	COG0527	aspartate kinase activity
RLV_RS32635	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
RLV_RS32645	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS32660	COG2226	methyltransferase
RLV_RS32675	COG0494	nUDIX hydrolase
RLV_RS32680	COG0456	acetyltransferase
RLV_RS32685	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
RLV_RS32695	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RLV_RS32700	COG0653	protein targeting
RLV_RS32715	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RLV_RS32720	COG0667	Aldo Keto reductase
RLV_RS32760	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
RLV_RS32760	COG4651	solute:proton antiporter activity
RLV_RS32790	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
RLV_RS32800	COG0300	oxidoreductase activity
RLV_RS32825	COG2086	electron transfer activity
RLV_RS32830	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
RLV_RS32835	COG1250	3-hydroxyacyl-CoA dehydrogenase
RLV_RS32840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RLV_RS32845	COG0165	Argininosuccinate lyase
RLV_RS32885	COG2884	Cell division ATP-binding protein ftsE
RLV_RS32905	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
RLV_RS32920	COG0287	Prephenate dehydrogenase
RLV_RS32925	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RLV_RS32930	COG2226	methyltransferase
RLV_RS32935	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS32955	COG0227	Belongs to the bacterial ribosomal protein bL28 family
RLV_RS32965	COG0563	adenylate kinase activity
RLV_RS32995	COG4536	flavin adenine dinucleotide binding
RLV_RS33000	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
RLV_RS33005	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RLV_RS33015	COG4974	Belongs to the 'phage' integrase family
RLV_RS33020	COG0825	malonyl-CoA metabolic process
RLV_RS33025	COG3034	peptidoglycan biosynthetic process
RLV_RS33035	COG0523	cobalamin synthesis protein
RLV_RS33040	COG1686	Belongs to the peptidase S11 family
RLV_RS33055	COG4303	Ethanolamine ammonia lyase large subunit
RLV_RS33060	COG4302	ethanolamine ammonia-lyase activity
RLV_RS33065	COG0531	amino acid
RLV_RS33090	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
RLV_RS33105	COG0395	ABC-type sugar transport system, permease component
RLV_RS33110	COG1175	transmembrane transport
RLV_RS33125	COG0156	8-amino-7-oxononanoate synthase activity
RLV_RS33135	COG0729	surface antigen
RLV_RS33150	COG0010	Belongs to the arginase family
RLV_RS33155	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RLV_RS33165	COG0835	chemotaxis
RLV_RS33180	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
RLV_RS33185	COG3383	formate dehydrogenase (NAD+) activity
RLV_RS33200	COG0583	DNA-binding transcription factor activity
RLV_RS33205	COG0640	Transcriptional regulator
RLV_RS33210	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS33230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RLV_RS33235	COG1116	anion transmembrane transporter activity
RLV_RS33240	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RLV_RS33255	COG0355	proton-transporting ATP synthase activity, rotational mechanism
RLV_RS33265	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
RLV_RS33270	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
RLV_RS33275	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
RLV_RS33280	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
RLV_RS33295	COG4608	Belongs to the ABC transporter superfamily
RLV_RS33300	COG0444	Belongs to the ABC transporter superfamily
RLV_RS33305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS33310	COG0601	transmembrane transport
RLV_RS33320	COG3664	PFAM glycoside hydrolase family 39
RLV_RS33330	COG0673	inositol 2-dehydrogenase activity
RLV_RS33335	COG0129	dihydroxy-acid dehydratase activity
RLV_RS33345	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS33360	COG4974	Belongs to the 'phage' integrase family
RLV_RS33375	COG3038	cytochrome b561
RLV_RS33395	COG1280	lysine exporter protein (LysE YggA)
RLV_RS33400	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS33415	COG0508	dehydrogenase complex catalyzes the overall conversion of
RLV_RS33430	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
RLV_RS33440	COG0045	succinate-CoA ligase (ADP-forming) activity
RLV_RS33445	COG0039	L-malate dehydrogenase activity
RLV_RS33450	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
RLV_RS33455	COG2845	Protein of unknown function (DUF459)
RLV_RS33500	COG3842	ATPase activity
RLV_RS33505	COG4149	molybdate abc transporter
RLV_RS33525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS33530	COG0765	amino acid transport
RLV_RS33535	COG0765	amino acid transport
RLV_RS33540	COG2423	ornithine cyclodeaminase activity
RLV_RS33560	COG0747	negative chemotaxis
RLV_RS33570	COG0601	transmembrane transport
RLV_RS33595	COG2986	histidine ammonia-lyase
RLV_RS33615	COG2186	Transcriptional regulator
RLV_RS33625	COG0765	amino acid transport
RLV_RS33630	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
RLV_RS33640	COG1126	abc transporter atp-binding protein
RLV_RS33680	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
RLV_RS33685	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
RLV_RS33690	COG0181	hydroxymethylbilane synthase activity
RLV_RS33715	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RLV_RS33715	COG0519	Catalyzes the synthesis of GMP from XMP
RLV_RS33730	COG1872	DUF167
RLV_RS33735	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
RLV_RS33745	COG1217	gtp-binding protein TYPA
RLV_RS33750	COG0339	signal peptide processing
RLV_RS33800	COG4221	oxidoreductase activity
RLV_RS33805	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS33810	COG0137	argininosuccinate synthase activity
RLV_RS33830	COG4120	Belongs to the binding-protein-dependent transport system permease family
RLV_RS33840	COG0820	rRNA (adenine-C2-)-methyltransferase activity
RLV_RS33850	COG1595	DNA-templated transcription, initiation
RLV_RS33860	COG2154	pterin-4-alpha-carbinolamine dehydratase
RLV_RS33865	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RLV_RS33870	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
RLV_RS33880	COG4181	ATPase activity
RLV_RS33890	COG0670	Belongs to the BI1 family
RLV_RS33910	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
RLV_RS33915	COG4133	protoheme IX ABC transporter activity
RLV_RS33920	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RLV_RS33925	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
RLV_RS33945	COG2917	probably involved in intracellular septation
RLV_RS33950	COG0552	protein localization to endoplasmic reticulum
RLV_RS33955	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RLV_RS33960	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
RLV_RS33975	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
RLV_RS33980	COG1605	Chorismate mutase
RLV_RS33980	COG0287	Prephenate dehydrogenase
RLV_RS33985	COG0228	four-way junction DNA binding
RLV_RS33990	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
RLV_RS33995	COG0336	Belongs to the RNA methyltransferase TrmD family
RLV_RS34000	COG0335	large ribosomal subunit rRNA binding
RLV_RS34005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS34010	COG0765	amino acid transport
RLV_RS34020	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
RLV_RS34040	COG0745	RESPONSE REGULATOR receiver
RLV_RS34055	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
RLV_RS34060	COG1674	ftsk spoiiie
RLV_RS34065	COG0004	ammonium transporteR
RLV_RS34070	COG0347	Belongs to the P(II) protein family
RLV_RS34075	COG1946	Acyl-CoA thioesterase
RLV_RS34080	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
RLV_RS34085	COG2835	tetraacyldisaccharide 4'-kinase activity
RLV_RS34095	COG3118	belongs to the thioredoxin family
RLV_RS34140	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
RLV_RS34175	COG0582	viral genome integration into host DNA
RLV_RS34185	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS34190	COG0583	DNA-binding transcription factor activity
RLV_RS34205	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RLV_RS34255	COG4166	transmembrane transport
RLV_RS34260	COG0601	transmembrane transport
RLV_RS34265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS34270	COG0405	Gamma-glutamyltransferase
RLV_RS34280	COG4172	Belongs to the ABC transporter superfamily
RLV_RS34290	COG3842	ATPase activity
RLV_RS34305	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS34310	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS34315	COG5383	Protein conserved in bacteria
RLV_RS34330	COG0438	transferase activity, transferring glycosyl groups
RLV_RS34360	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
RLV_RS34370	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RLV_RS34385	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
RLV_RS34400	COG0765	amino acid transport
RLV_RS34405	COG1126	abc transporter atp-binding protein
RLV_RS34410	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RLV_RS34415	COG4821	SIS domain
RLV_RS34420	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
RLV_RS34425	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
RLV_RS34430	COG2188	Transcriptional regulator
RLV_RS34440	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
RLV_RS34445	COG4178	(ABC) transporter
RLV_RS34455	COG0488	(ABC) transporter
RLV_RS34480	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RLV_RS34485	COG1329	Transcriptional regulator
RLV_RS34490	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
RLV_RS34515	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS34520	COG0183	Belongs to the thiolase family
RLV_RS34525	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
RLV_RS34540	COG0333	Belongs to the bacterial ribosomal protein bL32 family
RLV_RS34555	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
RLV_RS34560	COG0142	geranyltranstransferase activity
RLV_RS34585	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
RLV_RS34590	COG2223	nitrite transmembrane transporter activity
RLV_RS34600	COG0697	spore germination
RLV_RS34605	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RLV_RS34610	COG0765	amino acid transport
RLV_RS34615	COG1126	abc transporter atp-binding protein
RLV_RS34625	COG0431	NADPH-dependent FMN reductase
RLV_RS34630	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
RLV_RS34640	COG1132	(ABC) transporter
RLV_RS34675	COG3459	Glycosyltransferase 36 associated
RLV_RS34685	COG4608	Belongs to the ABC transporter superfamily
RLV_RS34690	COG0444	Belongs to the ABC transporter superfamily
RLV_RS34695	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS34700	COG0601	transmembrane transport
RLV_RS34715	COG4211	Belongs to the binding-protein-dependent transport system permease family
RLV_RS34720	COG1129	ABC transporter
RLV_RS34775	COG0261	This protein binds to 23S rRNA in the presence of protein L20
RLV_RS34780	COG0211	Belongs to the bacterial ribosomal protein bL27 family
RLV_RS34800	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
RLV_RS34805	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
RLV_RS34810	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
RLV_RS34815	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
RLV_RS34820	COG0725	ABC transporter, periplasmic molybdate-binding protein
RLV_RS34825	COG4149	molybdate abc transporter
RLV_RS34830	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
RLV_RS34840	COG0799	negative regulation of ribosome biogenesis
RLV_RS34845	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
RLV_RS34855	COG0793	Belongs to the peptidase S41A family
RLV_RS34865	COG0494	nUDIX hydrolase
RLV_RS34880	COG0587	DNA-directed DNA polymerase activity
RLV_RS34915	COG0066	3-isopropylmalate dehydratase activity
RLV_RS34925	COG0473	3-isopropylmalate dehydrogenase activity
RLV_RS34930	COG0671	phosphoesterase, PA-phosphatase related
RLV_RS34945	COG1136	(ABC) transporter
RLV_RS34955	COG1785	Belongs to the alkaline phosphatase family
RLV_RS34965	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RLV_RS34975	COG4251	negative regulation of phosphorylation
RLV_RS34975	COG3706	GGDEF domain
RLV_RS34975	COG2203	Gaf domain
RLV_RS34975	COG5001	Diguanylate cyclase
RLV_RS34980	COG0288	reversible hydration of carbon dioxide
RLV_RS34995	COG2902	Dehydrogenase
RLV_RS35000	COG2270	Major facilitator Superfamily
RLV_RS35010	COG0138	bifunctional purine biosynthesis protein purh
RLV_RS35025	COG0501	Belongs to the peptidase M48B family
RLV_RS35035	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
RLV_RS35055	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
RLV_RS35060	COG0495	leucyl-tRNA aminoacylation
RLV_RS35085	COG0357	Ribosomal RNA small subunit methyltransferase G
RLV_RS35090	COG0445	tRNA wobble uridine modification
RLV_RS35095	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
RLV_RS35100	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
RLV_RS35105	COG1981	membrane
RLV_RS35110	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
RLV_RS35120	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
RLV_RS35125	COG0424	maF-like protein
RLV_RS35130	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
RLV_RS35135	COG0237	dephospho-CoA kinase activity
RLV_RS35145	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
RLV_RS35150	COG3030	protein affecting phage T7 exclusion by the F plasmid
RLV_RS35160	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
RLV_RS35190	COG0435	Glutathione S-transferase
RLV_RS35215	COG0135	phosphoribosylanthranilate isomerase activity
RLV_RS35220	COG0133	tryptophan synthase activity
RLV_RS35225	COG0159	tryptophan synthase activity
RLV_RS35230	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
RLV_RS35235	COG0285	dihydrofolate synthase activity
RLV_RS35245	COG1074	ATP-dependent DNA helicase activity
RLV_RS35250	COG2887	Belongs to the helicase family. UvrD subfamily
RLV_RS35255	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
RLV_RS35260	COG3178	'Phosphotransferase
RLV_RS35265	COG2205	protein histidine kinase activity
RLV_RS35270	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
RLV_RS35275	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RLV_RS35280	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RLV_RS35280	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
RLV_RS35290	COG0642	Histidine kinase
RLV_RS35295	COG0745	RESPONSE REGULATOR receiver
RLV_RS35300	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
RLV_RS35315	COG1072	(Pantothenic acid kinase))
RLV_RS35320	COG0140	phosphoribosyl-ATP diphosphatase activity
RLV_RS35325	COG0107	imidazoleglycerol-phosphate synthase activity
RLV_RS35330	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
RLV_RS35345	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
RLV_RS35355	COG0131	Imidazoleglycerol-phosphate dehydratase
RLV_RS35360	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
RLV_RS35370	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
RLV_RS35380	COG2124	cytochrome p450
RLV_RS35400	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
RLV_RS35410	COG1643	Atp-dependent helicase
RLV_RS35415	COG2423	ornithine cyclodeaminase activity
RLV_RS35500	COG2197	response regulator
RLV_RS35515	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RLV_RS35520	COG1215	transferase activity, transferring glycosyl groups
RLV_RS35535	COG2182	Extracellular solute-binding protein
RLV_RS35550	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RLV_RS35555	COG0673	inositol 2-dehydrogenase activity
RLV_RS35570	COG0673	inositol 2-dehydrogenase activity
RLV_RS35575	COG1309	transcriptional regulator
RLV_RS35585	COG1175	transmembrane transport
RLV_RS35590	COG0395	ABC-type sugar transport system, permease component
RLV_RS35595	COG0673	inositol 2-dehydrogenase activity
RLV_RS35600	COG3842	ATPase activity
RLV_RS35615	COG0246	Mannitol dehydrogenase
RLV_RS35620	COG1904	glucuronate isomerase
RLV_RS35635	COG2900	Belongs to the SlyX family
RLV_RS35640	COG1012	belongs to the aldehyde dehydrogenase family
RLV_RS35645	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
RLV_RS35665	COG0539	negative regulation of cytoplasmic translation
RLV_RS35670	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
RLV_RS35675	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
RLV_RS35730	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
RLV_RS35740	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
RLV_RS35745	COG2813	Specifically methylates the guanine in position
RLV_RS35750	COG1185	polyribonucleotide nucleotidyltransferase activity
RLV_RS35755	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
RLV_RS35760	COG2267	carboxylic ester hydrolase activity
RLV_RS35765	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
RLV_RS35770	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
RLV_RS35775	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
RLV_RS35790	COG0779	Required for maturation of 30S ribosomal subunits
RLV_RS35795	COG2814	Major facilitator Superfamily
RLV_RS35805	COG2951	lytic endotransglycosylase activity
RLV_RS35810	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
RLV_RS35815	COG2258	MOSC domain
RLV_RS35820	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
RLV_RS35825	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
RLV_RS35840	COG2816	NAD+ diphosphatase activity
RLV_RS35845	COG2378	regulation of single-species biofilm formation
RLV_RS35860	COG1605	Chorismate mutase
RLV_RS35860	COG0077	Prephenate dehydratase
RLV_RS35865	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
RLV_RS35870	COG3474	cytochrome
RLV_RS35880	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RLV_RS35905	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
RLV_RS35910	COG1396	sequence-specific DNA binding
RLV_RS35920	COG0484	heat shock protein binding
RLV_RS35925	COG0443	Heat shock 70 kDa protein
RLV_RS35930	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
RLV_RS35945	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RLV_RS35950	COG5001	Diguanylate cyclase
RLV_RS35950	COG3300	MHYT domain
RLV_RS35970	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RLV_RS35970	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RLV_RS35975	COG1674	ftsk spoiiie
RLV_RS35980	COG0456	acetyltransferase
RLV_RS35980	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
RLV_RS35985	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
RLV_RS35990	COG3454	Phosphonate metabolism
RLV_RS35995	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
RLV_RS36000	COG3639	organic phosphonate transmembrane transporter activity
RLV_RS36005	COG3639	organic phosphonate transmembrane transporter activity
RLV_RS36015	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
RLV_RS36025	COG4778	phosphonate C-P lyase system protein PhnL
RLV_RS36030	COG4107	phosphonate C-P lyase system protein PhnK
RLV_RS36035	COG3627	carbon phosphorus lyase activity
RLV_RS36040	COG3626	phosphonate metabolism
RLV_RS36045	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
RLV_RS36050	COG3624	Phosphonate C-P lyase system protein PhnG
RLV_RS36055	COG2188	Transcriptional regulator
RLV_RS36060	COG0588	phosphoglycerate mutase activity
RLV_RS36065	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
RLV_RS36070	COG1132	(ABC) transporter
RLV_RS36075	COG0837	glucose binding
RLV_RS36080	COG1803	Methylglyoxal synthase
RLV_RS36085	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
RLV_RS36090	COG4166	transmembrane transport
RLV_RS36095	COG4174	ABC transporter (Permease)
RLV_RS36100	COG4239	(ABC) transporter, permease
RLV_RS36105	COG4172	Belongs to the ABC transporter superfamily
RLV_RS36120	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
RLV_RS36140	COG1522	sequence-specific DNA binding
RLV_RS36155	COG1744	ABC transporter substrate-binding protein PnrA-like
RLV_RS36160	COG3845	ABC transporter
RLV_RS36165	COG4603	Belongs to the binding-protein-dependent transport system permease family
RLV_RS36170	COG1079	Belongs to the binding-protein-dependent transport system permease family
RLV_RS36180	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
RLV_RS36185	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
RLV_RS36190	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
RLV_RS36200	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
RLV_RS36205	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
RLV_RS36210	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
RLV_RS36245	COG4964	Belongs to the GSP D family
RLV_RS36275	COG1280	lysine exporter protein (LysE YggA)
RLV_RS36285	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
RLV_RS36300	COG0154	amidase activity
RLV_RS36305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RLV_RS36315	COG0747	negative chemotaxis
RLV_RS36335	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
RLV_RS36345	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
RLV_RS36355	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
RLV_RS36390	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
RLV_RS36415	COG0481	GTPase activity
RLV_RS36445	COG2137	regulation of response to DNA damage stimulus
RLV_RS36470	COG0596	Alpha beta hydrolase
RLV_RS36470	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
RLV_RS36475	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
RLV_RS36480	COG0291	Belongs to the bacterial ribosomal protein bL35 family
RLV_RS36485	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
RLV_RS36490	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
RLV_RS36495	COG0072	phenylalanine-tRNA ligase activity
RLV_RS36495	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RLV_RS36505	COG0667	Aldo Keto reductase
RLV_RS36515	COG3685	Protein conserved in bacteria
RLV_RS36560	COG1570	exodeoxyribonuclease VII activity
RLV_RS36565	COG2249	NAD(P)H dehydrogenase (quinone) activity
RLV_RS36570	COG2309	aminopeptidase activity
RLV_RS36575	COG0625	glutathione transferase activity
RLV_RS36590	COG1393	Belongs to the ArsC family
RLV_RS36600	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RLV_RS36605	COG4221	oxidoreductase activity
RLV_RS36610	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS36620	COG0583	DNA-binding transcription factor activity
RLV_RS36635	COG2207	Transcriptional regulator
RLV_RS36640	COG1881	PFAM PEBP family protein
RLV_RS36655	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RLV_RS36660	COG0583	DNA-binding transcription factor activity
RLV_RS36665	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS36675	COG0519	Catalyzes the synthesis of GMP from XMP
RLV_RS36675	COG0518	GMP synthase (glutamine-hydrolyzing) activity
RLV_RS36715	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RLV_RS36715	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
RLV_RS36720	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
RLV_RS36730	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RLV_RS36740	COG1968	undecaprenyl-diphosphatase activity
RLV_RS36755	COG0284	orotidine-5'-phosphate decarboxylase activity
RLV_RS36765	COG3963	phosphatidate phosphatase activity
RLV_RS36780	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
RLV_RS36785	COG0792	nuclease activity
RLV_RS36795	COG1609	Transcriptional regulator
RLV_RS36810	COG1172	Belongs to the binding-protein-dependent transport system permease family
RLV_RS36815	COG0189	ligase activity
RLV_RS36820	COG0606	chelatase, subunit chli
RLV_RS36840	COG0783	Belongs to the Dps family
RLV_RS36845	COG0697	spore germination
RLV_RS36850	COG1522	sequence-specific DNA binding
RLV_RS36860	COG0756	dUTP diphosphatase activity
RLV_RS36865	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
RLV_RS36875	COG0583	DNA-binding transcription factor activity
RLV_RS36905	COG2807	transmembrane transport
RLV_RS36920	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
RLV_RS36925	COG1028	Short-chain dehydrogenase reductase Sdr
RLV_RS36935	COG0583	DNA-binding transcription factor activity
RLV_RS36945	COG2814	Major facilitator Superfamily
RLV_RS36955	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
RLV_RS36975	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
RLV_RS36980	COG2986	histidine ammonia-lyase
RLV_RS36985	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
RLV_RS36990	COG2226	methyltransferase
RLV_RS36995	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
RLV_RS37000	COG1024	Enoyl-CoA hydratase
RLV_RS37005	COG0268	Binds directly to 16S ribosomal RNA
RLV_RS37010	COG1192	Involved in chromosome partitioning
RLV_RS37015	COG1475	DNA binding
RLV_RS37020	COG0640	Transcriptional regulator
RLV_RS37095	COG2205	protein histidine kinase activity
RLV_RS37150	COG3415	Transposase
RLV_RS37200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
RLV_RS37230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RLV_RS37290	COG1192	Involved in chromosome partitioning
RLV_RS37380	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RLV_RS37415	COG3415	Transposase
RLV_RS37505	COG0739	heme binding
RLV_RS37505	COG1196	nuclear chromosome segregation
RLV_RS37505	COG0741	lytic transglycosylase activity
RLV_RS37550	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
RLV_RS37580	COG2801	Transposase and inactivated derivatives
RLV_RS37650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS37655	COG4959	Type IV secretory pathway protease TraF
RLV_RS37660	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RLV_RS37685	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RLV_RS37705	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RLV_RS37710	COG4959	Type IV secretory pathway protease TraF
RLV_RS37745	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RLV_RS37800	COG0640	Transcriptional regulator
RLV_RS37870	COG3505	Type IV secretory pathway VirD4
RLV_RS37885	COG2801	Transposase and inactivated derivatives
RLV_RS37900	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RLV_RS37915	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
RLV_RS37945	COG1196	nuclear chromosome segregation
RLV_RS37945	COG0741	lytic transglycosylase activity
RLV_RS37945	COG0739	heme binding
RLV_RS37990	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
RLV_RS38020	COG2801	Transposase and inactivated derivatives
RLV_RS38040	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RLV_RS38055	COG4467	Involved in initiation control of chromosome replication