RLV_RS00010	SM00470	ParB-like nuclease domain
RLV_RS00025	SM00357	Cold shock protein domain
RLV_RS00070	SM00487	DEAD-like helicases superfamily
RLV_RS00070	SM00491	RLV_RS00070
RLV_RS00075	SM00953	RLV_RS00075
RLV_RS00095	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00125	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00175	SM00481	DNA polymerase alpha chain like domain
RLV_RS00190	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00240	SM00155	Phospholipase D. Active site motifs.
RLV_RS00300	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00315	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS00340	SM00344	helix_turn_helix ASNC type
RLV_RS00355	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS00385	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00390	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00430	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS00540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS00540	SM00895	RLV_RS00540
RLV_RS00560	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS00600	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00605	SM00382	ATPases associated with a variety of cellular activities
RLV_RS00770	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS00770	SM00387	Histidine kinase-like ATPases
RLV_RS00775	SM00448	cheY-homologous receiver domain
RLV_RS00775	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS00885	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RLV_RS00950	SM01209	RLV_RS00950
RLV_RS00965	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS00975	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01030	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01050	SM00344	helix_turn_helix ASNC type
RLV_RS01090	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01105	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS01165	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
RLV_RS01185	SM00893	Electron transfer flavoprotein domain
RLV_RS01190	SM00893	Electron transfer flavoprotein domain
RLV_RS01205	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01260	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01290	SM00825	Beta-ketoacyl synthase
RLV_RS01295	SM01266	RLV_RS01295
RLV_RS01320	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01340	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01370	SM00421	helix_turn_helix, Lux Regulon
RLV_RS01440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS01590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS01590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS01595	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01635	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01655	SM01329	RLV_RS01655
RLV_RS01660	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS01660	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS01670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS01670	SM00866	RLV_RS01670
RLV_RS01690	SM00487	DEAD-like helicases superfamily
RLV_RS01695	SM00470	ParB-like nuclease domain
RLV_RS01735	SM00773	Proposed nucleic acid binding domain
RLV_RS01805	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS01855	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01885	SM00470	ParB-like nuclease domain
RLV_RS01905	SM00857	Resolvase, N terminal domain
RLV_RS01915	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS01950	SM00354	helix_turn _helix lactose operon repressor
RLV_RS01970	SM00640	Glycosyl hydrolases family 32
RLV_RS01975	SM00382	ATPases associated with a variety of cellular activities
RLV_RS01985	SM00966	SpoVT / AbrB like domain 
RLV_RS01995	SM00354	helix_turn _helix lactose operon repressor
RLV_RS02010	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02030	SM00971	Serine acetyltransferase, N-terminal
RLV_RS02065	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS02085	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02085	SM00930	RLV_RS02085
RLV_RS02130	SM00796	Allophanate hydrolase subunit 1
RLV_RS02130	SM00797	Allophanate hydrolase subunit 2
RLV_RS02130	SM00878	Biotin carboxylase C-terminal domain
RLV_RS02145	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02160	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS02180	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02205	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02210	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02230	SM00978	RLV_RS02230
RLV_RS02255	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02265	SM00354	helix_turn _helix lactose operon repressor
RLV_RS02275	SM00028	Tetratricopeptide repeats
RLV_RS02275	SM00267	diguanylate cyclase
RLV_RS02290	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02295	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02325	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02360	SM00354	helix_turn _helix lactose operon repressor
RLV_RS02390	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02395	SM00354	helix_turn _helix lactose operon repressor
RLV_RS02405	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02445	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02500	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02520	SM00563	Phosphate acyltransferases
RLV_RS02535	SM00271	DnaJ molecular chaperone homology domain
RLV_RS02560	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02580	SM00421	helix_turn_helix, Lux Regulon
RLV_RS02655	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02690	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS02700	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02710	SM00822	RLV_RS02710
RLV_RS02715	SM00822	RLV_RS02715
RLV_RS02720	SM00387	Histidine kinase-like ATPases
RLV_RS02720	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS02725	SM00448	cheY-homologous receiver domain
RLV_RS02725	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS02740	SM00421	helix_turn_helix, Lux Regulon
RLV_RS02790	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02815	SM00354	helix_turn _helix lactose operon repressor
RLV_RS02820	SM00028	Tetratricopeptide repeats
RLV_RS02820	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS02840	SM00878	Biotin carboxylase C-terminal domain
RLV_RS02850	SM00796	Allophanate hydrolase subunit 1
RLV_RS02855	SM00797	Allophanate hydrolase subunit 2
RLV_RS02890	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02895	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS02920	SM01119	RLV_RS02920
RLV_RS02940	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02950	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS02970	SM00382	ATPases associated with a variety of cellular activities
RLV_RS02975	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS02980	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS03000	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS03005	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03010	SM00344	helix_turn_helix ASNC type
RLV_RS03015	SM00387	Histidine kinase-like ATPases
RLV_RS03015	SM01049	RLV_RS03015
RLV_RS03020	SM00421	helix_turn_helix, Lux Regulon
RLV_RS03020	SM00448	cheY-homologous receiver domain
RLV_RS03035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS03035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS03050	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03105	SM00829	Enoylreductase
RLV_RS03110	SM00354	helix_turn _helix lactose operon repressor
RLV_RS03120	SM00327	von Willebrand factor (vWF) type A domain
RLV_RS03145	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RLV_RS03150	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03175	SM00881	CoA binding domain
RLV_RS03195	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS03215	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS03220	SM00052	Putative diguanylate phosphodiesterase
RLV_RS03220	SM00267	diguanylate cyclase
RLV_RS03240	SM00903	Flavin reductase like domain
RLV_RS03255	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS03255	SM00866	RLV_RS03255
RLV_RS03260	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS03275	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03290	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS03330	SM00895	RLV_RS03330
RLV_RS03335	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03375	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03430	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS03430	SM01134	RLV_RS03430
RLV_RS03440	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03500	SM00861	Transketolase, pyrimidine binding domain
RLV_RS03520	SM00822	RLV_RS03520
RLV_RS03525	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS03540	SM00878	Biotin carboxylase C-terminal domain
RLV_RS03560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS03560	SM00387	Histidine kinase-like ATPases
RLV_RS03560	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS03565	SM00448	cheY-homologous receiver domain
RLV_RS03565	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS03610	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03615	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03635	SM00354	helix_turn _helix lactose operon repressor
RLV_RS03640	SM00812	Alpha-L-fucosidase
RLV_RS03675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS03675	SM00895	RLV_RS03675
RLV_RS03680	SM01130	RLV_RS03680
RLV_RS03685	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03710	SM00354	helix_turn _helix lactose operon repressor
RLV_RS03715	SM00354	helix_turn _helix lactose operon repressor
RLV_RS03740	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03750	SM00966	SpoVT / AbrB like domain 
RLV_RS03765	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03800	SM00903	Flavin reductase like domain
RLV_RS03815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS03815	SM00895	RLV_RS03815
RLV_RS03825	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS03830	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03870	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS03905	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS03910	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS03915	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS03965	SM00895	RLV_RS03965
RLV_RS03975	SM00382	ATPases associated with a variety of cellular activities
RLV_RS03980	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04000	SM01130	RLV_RS04000
RLV_RS04020	SM00953	RLV_RS04020
RLV_RS04040	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04055	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS04065	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04105	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04110	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04120	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS04120	SM01134	RLV_RS04120
RLV_RS04170	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS04205	SM00895	RLV_RS04205
RLV_RS04265	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04275	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS04285	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS04290	SM00736	Dystroglycan-type cadherin-like domains.
RLV_RS04335	SM00421	helix_turn_helix, Lux Regulon
RLV_RS04365	SM00710	Parallel beta-helix repeats
RLV_RS04435	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04440	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04465	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS04485	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04490	SM00354	helix_turn _helix lactose operon repressor
RLV_RS04505	SM00773	Proposed nucleic acid binding domain
RLV_RS04520	SM00470	ParB-like nuclease domain
RLV_RS04530	SM01130	RLV_RS04530
RLV_RS04535	SM00895	RLV_RS04535
RLV_RS04575	SM00354	helix_turn _helix lactose operon repressor
RLV_RS04595	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS04595	SM01134	RLV_RS04595
RLV_RS04600	SM01133	RLV_RS04600
RLV_RS04610	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04645	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS04645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS04695	SM00054	EF-hand, calcium binding motif
RLV_RS04710	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS04710	SM00091	PAS domain
RLV_RS04710	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS04725	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS04740	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS04760	SM00895	RLV_RS04760
RLV_RS04765	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS04780	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04830	SM00354	helix_turn _helix lactose operon repressor
RLV_RS04840	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04880	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS04880	SM01134	RLV_RS04880
RLV_RS04895	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04930	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS04930	SM01134	RLV_RS04930
RLV_RS04975	SM00382	ATPases associated with a variety of cellular activities
RLV_RS04985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS04985	SM00895	RLV_RS04985
RLV_RS05000	SM01130	RLV_RS05000
RLV_RS05015	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS05025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS05025	SM00895	RLV_RS05025
RLV_RS05035	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05070	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05105	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS05105	SM01134	RLV_RS05105
RLV_RS05115	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS05120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RLV_RS05125	SM00052	Putative diguanylate phosphodiesterase
RLV_RS05125	SM00267	diguanylate cyclase
RLV_RS05130	SM00387	Histidine kinase-like ATPases
RLV_RS05130	SM00911	HWE histidine kinase
RLV_RS05135	SM00354	helix_turn _helix lactose operon repressor
RLV_RS05155	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05200	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS05200	SM00245	tail specific protease
RLV_RS05215	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05225	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS05235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS05240	SM00421	helix_turn_helix, Lux Regulon
RLV_RS05240	SM00448	cheY-homologous receiver domain
RLV_RS05245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS05245	SM00387	Histidine kinase-like ATPases
RLV_RS05255	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05285	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS05335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS05335	SM00895	RLV_RS05335
RLV_RS05360	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS05390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS05410	SM00923	MbtH-like protein
RLV_RS05415	SM01006	Siderophore biosynthesis protein domain
RLV_RS05470	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS05520	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05560	SM00267	diguanylate cyclase
RLV_RS05565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS05565	SM00895	RLV_RS05565
RLV_RS05585	SM01130	RLV_RS05585
RLV_RS05590	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05595	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05600	SM01130	RLV_RS05600
RLV_RS05605	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS05635	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05640	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05675	SM00758	RLV_RS05675
RLV_RS05675	SM01217	RLV_RS05675
RLV_RS05695	SM00872	Alpha mannosidase, middle domain
RLV_RS05725	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS05730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS05730	SM00895	RLV_RS05730
RLV_RS05775	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05780	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS05780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS05790	SM00945	ProQ/FINO family
RLV_RS05835	SM00387	Histidine kinase-like ATPases
RLV_RS05840	SM00421	helix_turn_helix, Lux Regulon
RLV_RS05840	SM00448	cheY-homologous receiver domain
RLV_RS05845	SM00091	PAS domain
RLV_RS05845	SM00387	Histidine kinase-like ATPases
RLV_RS05845	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS05850	SM00448	cheY-homologous receiver domain
RLV_RS05865	SM00829	Enoylreductase
RLV_RS05885	SM00387	Histidine kinase-like ATPases
RLV_RS05935	SM01120	RLV_RS05935
RLV_RS05960	SM00382	ATPases associated with a variety of cellular activities
RLV_RS05990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS05990	SM00895	RLV_RS05990
RLV_RS06015	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS06015	SM00895	RLV_RS06015
RLV_RS06040	SM00344	helix_turn_helix ASNC type
RLV_RS06045	SM01005	Alanine racemase, C-terminal domain
RLV_RS06055	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS06065	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS06105	SM00448	cheY-homologous receiver domain
RLV_RS06165	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS06165	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS06225	SM00382	ATPases associated with a variety of cellular activities
RLV_RS06265	SM00382	ATPases associated with a variety of cellular activities
RLV_RS06315	SM00382	ATPases associated with a variety of cellular activities
RLV_RS06340	SM00773	Proposed nucleic acid binding domain
RLV_RS06350	SM00849	Metallo-beta-lactamase superfamily
RLV_RS06430	SM00318	Staphylococcal nuclease homologues
RLV_RS06470	SM00481	DNA polymerase alpha chain like domain
RLV_RS06475	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS06475	SM00454	Sterile alpha motif.
RLV_RS06495	SM00448	cheY-homologous receiver domain
RLV_RS06500	SM00448	cheY-homologous receiver domain
RLV_RS06535	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
RLV_RS06600	SM00953	RLV_RS06600
RLV_RS06645	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS06680	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RLV_RS06690	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RLV_RS06710	SM00382	ATPases associated with a variety of cellular activities
RLV_RS06715	SM00382	ATPases associated with a variety of cellular activities
RLV_RS06720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS06720	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS06720	SM01049	RLV_RS06720
RLV_RS06735	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS06765	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS06770	SM00354	helix_turn _helix lactose operon repressor
RLV_RS06780	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RLV_RS06780	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RLV_RS06810	SM00822	RLV_RS06810
RLV_RS06860	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS06875	SM00382	ATPases associated with a variety of cellular activities
RLV_RS06895	SM00344	helix_turn_helix ASNC type
RLV_RS06905	SM01130	RLV_RS06905
RLV_RS06970	SM00861	Transketolase, pyrimidine binding domain
RLV_RS06985	SM00382	ATPases associated with a variety of cellular activities
RLV_RS07030	SM00382	ATPases associated with a variety of cellular activities
RLV_RS07040	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS07070	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS07070	SM00091	PAS domain
RLV_RS07070	SM00911	HWE histidine kinase
RLV_RS07165	SM00382	ATPases associated with a variety of cellular activities
RLV_RS07220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS07220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS07255	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RLV_RS07260	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RLV_RS07290	SM00849	Metallo-beta-lactamase superfamily
RLV_RS07310	SM00822	RLV_RS07310
RLV_RS07325	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RLV_RS07330	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RLV_RS07340	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS07355	SM00822	RLV_RS07355
RLV_RS07360	SM00382	ATPases associated with a variety of cellular activities
RLV_RS07420	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RLV_RS07460	SM01007	Class II Aldolase and Adducin N-terminal domain
RLV_RS07475	SM01329	RLV_RS07475
RLV_RS07540	SM00382	ATPases associated with a variety of cellular activities
RLV_RS07550	SM00829	Enoylreductase
RLV_RS07555	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RLV_RS07555	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RLV_RS07650	SM00822	RLV_RS07650
RLV_RS07670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS07670	SM00895	RLV_RS07670
RLV_RS07720	SM00854	Bacterial capsule synthesis protein PGA_cap
RLV_RS07730	SM01329	RLV_RS07730
RLV_RS07740	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS07750	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS07750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS07760	SM00829	Enoylreductase
RLV_RS07805	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS07810	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS07875	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS07900	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
RLV_RS07930	SM00244	prohibitin homologues
RLV_RS07960	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS08000	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS08080	SM00838	Elongation factor G C-terminus
RLV_RS08080	SM00889	Elongation factor G, domain IV
RLV_RS08125	SM00822	RLV_RS08125
RLV_RS08130	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08135	SM01007	Class II Aldolase and Adducin N-terminal domain
RLV_RS08215	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS08220	SM00354	helix_turn _helix lactose operon repressor
RLV_RS08225	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08300	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
RLV_RS08325	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08385	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08390	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08410	SM01012	RLV_RS08410
RLV_RS08420	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS08455	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RLV_RS08485	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08495	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS08500	SM01217	RLV_RS08500
RLV_RS08590	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS08615	SM00866	RLV_RS08615
RLV_RS08690	SM00947	Carbonic anhydrase
RLV_RS08725	SM00822	RLV_RS08725
RLV_RS08745	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
RLV_RS08750	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
RLV_RS08765	SM00880	RLV_RS08765
RLV_RS08765	SM01118	RLV_RS08765
RLV_RS08820	SM00091	PAS domain
RLV_RS08820	SM00911	HWE histidine kinase
RLV_RS08860	SM00271	DnaJ molecular chaperone homology domain
RLV_RS08895	SM00953	RLV_RS08895
RLV_RS08905	SM00773	Proposed nucleic acid binding domain
RLV_RS08960	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS08985	SM00382	ATPases associated with a variety of cellular activities
RLV_RS08990	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS08990	SM00895	RLV_RS08990
RLV_RS09010	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS09060	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09065	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09080	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS09085	SM00028	Tetratricopeptide repeats
RLV_RS09095	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS09100	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS09115	SM00829	Enoylreductase
RLV_RS09125	SM00267	diguanylate cyclase
RLV_RS09140	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS09160	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09195	SM00893	Electron transfer flavoprotein domain
RLV_RS09200	SM00893	Electron transfer flavoprotein domain
RLV_RS09225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS09225	SM00895	RLV_RS09225
RLV_RS09230	SM01130	RLV_RS09230
RLV_RS09250	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09270	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS09300	SM00052	Putative diguanylate phosphodiesterase
RLV_RS09300	SM00267	diguanylate cyclase
RLV_RS09315	SM00822	RLV_RS09315
RLV_RS09330	SM00344	helix_turn_helix ASNC type
RLV_RS09345	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS09350	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS09355	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS09360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS09360	SM00895	RLV_RS09360
RLV_RS09380	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09385	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS09420	SM00344	helix_turn_helix ASNC type
RLV_RS09425	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09480	SM00354	helix_turn _helix lactose operon repressor
RLV_RS09485	SM01007	Class II Aldolase and Adducin N-terminal domain
RLV_RS09505	SM01329	RLV_RS09505
RLV_RS09560	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09565	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS09615	SM00895	RLV_RS09615
RLV_RS09625	SM00822	RLV_RS09625
RLV_RS09645	SM00883	Chaperonin 10 Kd subunit
RLV_RS09700	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09730	SM00448	cheY-homologous receiver domain
RLV_RS09730	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS09735	SM00387	Histidine kinase-like ATPases
RLV_RS09735	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS09745	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09755	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS09765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS09765	SM00895	RLV_RS09765
RLV_RS09770	SM00354	helix_turn _helix lactose operon repressor
RLV_RS09775	SM00812	Alpha-L-fucosidase
RLV_RS09800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS09800	SM01358	RLV_RS09800
RLV_RS09830	SM00710	Parallel beta-helix repeats
RLV_RS09835	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09850	SM00354	helix_turn _helix lactose operon repressor
RLV_RS09885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS09885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS09905	SM00849	Metallo-beta-lactamase superfamily
RLV_RS09915	SM00642	Alpha-amylase domain
RLV_RS09920	SM00642	Alpha-amylase domain
RLV_RS09925	SM00642	Alpha-amylase domain
RLV_RS09930	SM00382	ATPases associated with a variety of cellular activities
RLV_RS09945	SM00953	RLV_RS09945
RLV_RS09965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS09965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS09965	SM00387	Histidine kinase-like ATPases
RLV_RS09965	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS09965	SM00448	cheY-homologous receiver domain
RLV_RS09970	SM00387	Histidine kinase-like ATPases
RLV_RS09970	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS09970	SM00448	cheY-homologous receiver domain
RLV_RS09975	SM00642	Alpha-amylase domain
RLV_RS10030	SM00421	helix_turn_helix, Lux Regulon
RLV_RS10035	SM00354	helix_turn _helix lactose operon repressor
RLV_RS10040	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS10045	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS10055	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS10075	SM00155	Phospholipase D. Active site motifs.
RLV_RS10100	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS10105	SM00903	Flavin reductase like domain
RLV_RS10145	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10170	SM01133	RLV_RS10170
RLV_RS10185	SM00357	Cold shock protein domain
RLV_RS10215	SM00882	Coenzyme A transferase
RLV_RS10220	SM00822	RLV_RS10220
RLV_RS10230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS10230	SM00866	RLV_RS10230
RLV_RS10265	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10280	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10320	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10340	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10345	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10365	SM01130	RLV_RS10365
RLV_RS10380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS10380	SM00895	RLV_RS10380
RLV_RS10400	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS10410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS10430	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS10435	SM00421	helix_turn_helix, Lux Regulon
RLV_RS10435	SM00448	cheY-homologous receiver domain
RLV_RS10440	SM00448	cheY-homologous receiver domain
RLV_RS10445	SM00421	helix_turn_helix, Lux Regulon
RLV_RS10445	SM00448	cheY-homologous receiver domain
RLV_RS10450	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS10450	SM00091	PAS domain
RLV_RS10450	SM00387	Histidine kinase-like ATPases
RLV_RS10450	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS10490	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS10505	SM00421	helix_turn_helix, Lux Regulon
RLV_RS10505	SM00448	cheY-homologous receiver domain
RLV_RS10510	SM00091	PAS domain
RLV_RS10510	SM00387	Histidine kinase-like ATPases
RLV_RS10510	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS10565	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS10615	SM01118	RLV_RS10615
RLV_RS10640	SM00470	ParB-like nuclease domain
RLV_RS10675	SM00422	helix_turn_helix, mercury resistance
RLV_RS10680	SM00746	metallochaperone-like domain
RLV_RS10685	SM00642	Alpha-amylase domain
RLV_RS10695	SM00223	APPLE domain
RLV_RS10695	SM01359	RLV_RS10695
RLV_RS10695	SM01360	RLV_RS10695
RLV_RS10715	SM00448	cheY-homologous receiver domain
RLV_RS10735	SM00354	helix_turn _helix lactose operon repressor
RLV_RS10740	SM00354	helix_turn _helix lactose operon repressor
RLV_RS10750	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10755	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10770	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS10770	SM00091	PAS domain
RLV_RS10770	SM00387	Histidine kinase-like ATPases
RLV_RS10770	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS10770	SM00448	cheY-homologous receiver domain
RLV_RS10810	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS10850	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10860	SM00984	UDP binding domain
RLV_RS10875	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10910	SM00382	ATPases associated with a variety of cellular activities
RLV_RS10935	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS10965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS10965	SM00895	RLV_RS10965
RLV_RS10970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS10970	SM00895	RLV_RS10970
RLV_RS10980	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS11000	SM00382	ATPases associated with a variety of cellular activities
RLV_RS11055	SM00953	RLV_RS11055
RLV_RS11095	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS11095	SM00454	Sterile alpha motif.
RLV_RS11120	SM00052	Putative diguanylate phosphodiesterase
RLV_RS11135	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS11150	SM00382	ATPases associated with a variety of cellular activities
RLV_RS11225	SM00271	DnaJ molecular chaperone homology domain
RLV_RS11260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS11260	SM00866	RLV_RS11260
RLV_RS11285	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS11290	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS11290	SM00866	RLV_RS11290
RLV_RS11295	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS11310	SM00382	ATPases associated with a variety of cellular activities
RLV_RS11335	SM00028	Tetratricopeptide repeats
RLV_RS11350	SM00387	Histidine kinase-like ATPases
RLV_RS11350	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS11355	SM00421	helix_turn_helix, Lux Regulon
RLV_RS11355	SM00448	cheY-homologous receiver domain
RLV_RS11360	SM00448	cheY-homologous receiver domain
RLV_RS11365	SM00014	Acid phosphatase homologues
RLV_RS11390	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS11425	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS11450	SM00382	ATPases associated with a variety of cellular activities
RLV_RS11500	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS11500	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS11560	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS11560	SM00091	PAS domain
RLV_RS11560	SM00220	Serine/Threonine protein kinases, catalytic domain
RLV_RS11560	SM00387	Histidine kinase-like ATPases
RLV_RS11560	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS11565	SM00421	helix_turn_helix, Lux Regulon
RLV_RS11565	SM00448	cheY-homologous receiver domain
RLV_RS11570	SM00448	cheY-homologous receiver domain
RLV_RS11605	SM00267	diguanylate cyclase
RLV_RS11655	SM00028	Tetratricopeptide repeats
RLV_RS11670	SM00773	Proposed nucleic acid binding domain
RLV_RS11675	SM00052	Putative diguanylate phosphodiesterase
RLV_RS11675	SM00267	diguanylate cyclase
RLV_RS11675	SM01079	RLV_RS11675
RLV_RS11680	SM00382	ATPases associated with a variety of cellular activities
RLV_RS11685	SM00382	ATPases associated with a variety of cellular activities
RLV_RS11705	SM00813	Alpha-L-arabinofuranosidase C-terminus
RLV_RS11710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS11725	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS11730	SM00882	Coenzyme A transferase
RLV_RS11735	SM00882	Coenzyme A transferase
RLV_RS11755	SM00822	RLV_RS11755
RLV_RS11760	SM00642	Alpha-amylase domain
RLV_RS11795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS11795	SM00387	Histidine kinase-like ATPases
RLV_RS11795	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS11795	SM00448	cheY-homologous receiver domain
RLV_RS11805	SM00986	Uracil DNA glycosylase superfamily
RLV_RS11805	SM00987	UreE urease accessory protein, C-terminal domain 
RLV_RS11810	SM00155	Phospholipase D. Active site motifs.
RLV_RS11820	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
RLV_RS11825	SM00773	Proposed nucleic acid binding domain
RLV_RS11860	SM00849	Metallo-beta-lactamase superfamily
RLV_RS11865	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS11890	SM00831	Cation transporter/ATPase, N-terminus
RLV_RS11935	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS11940	SM00749	bacterial OsmY and nodulation domain
RLV_RS11945	SM00091	PAS domain
RLV_RS11945	SM00387	Histidine kinase-like ATPases
RLV_RS11945	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS11945	SM00448	cheY-homologous receiver domain
RLV_RS11950	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS11950	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS11955	SM00448	cheY-homologous receiver domain
RLV_RS11955	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS11970	SM00749	bacterial OsmY and nodulation domain
RLV_RS11975	SM00849	Metallo-beta-lactamase superfamily
RLV_RS11975	SM01027	Beta-Casp domain
RLV_RS12000	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS12000	SM00749	bacterial OsmY and nodulation domain
RLV_RS12010	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS12025	SM00054	EF-hand, calcium binding motif
RLV_RS12050	SM00448	cheY-homologous receiver domain
RLV_RS12050	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS12055	SM00387	Histidine kinase-like ATPases
RLV_RS12060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS12060	SM00895	RLV_RS12060
RLV_RS12085	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12105	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12135	SM00448	cheY-homologous receiver domain
RLV_RS12135	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS12140	SM00387	Histidine kinase-like ATPases
RLV_RS12140	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS12170	SM00829	Enoylreductase
RLV_RS12225	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12230	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12290	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12300	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS12300	SM01134	RLV_RS12300
RLV_RS12305	SM01007	Class II Aldolase and Adducin N-terminal domain
RLV_RS12335	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS12415	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12420	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12485	SM00912	haemagglutination activity domain
RLV_RS12550	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12575	SM01012	RLV_RS12575
RLV_RS12615	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12645	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS12675	SM00966	SpoVT / AbrB like domain 
RLV_RS12725	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12780	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS12795	SM01119	RLV_RS12795
RLV_RS12840	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS12845	SM00829	Enoylreductase
RLV_RS12850	SM00822	RLV_RS12850
RLV_RS12870	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12875	SM00382	ATPases associated with a variety of cellular activities
RLV_RS12910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS12910	SM00895	RLV_RS12910
RLV_RS12930	SM00479	RLV_RS12930
RLV_RS12935	SM00387	Histidine kinase-like ATPases
RLV_RS12935	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS12940	SM00448	cheY-homologous receiver domain
RLV_RS12940	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS12955	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS12975	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS12990	SM00357	Cold shock protein domain
RLV_RS13055	SM01230	RLV_RS13055
RLV_RS13075	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS13080	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS13165	SM00240	Forkhead associated domain
RLV_RS13200	SM00421	helix_turn_helix, Lux Regulon
RLV_RS13260	SM00220	Serine/Threonine protein kinases, catalytic domain
RLV_RS13265	SM00093	SERine  Proteinase INhibitors
RLV_RS13270	SM00020	Trypsin-like serine protease
RLV_RS13325	SM00115	Caspase, interleukin-1 beta converting enzyme (ICE) homologues
RLV_RS13325	SM00671	Sel1-like repeats.
RLV_RS13330	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS13340	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS13350	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS13370	SM00028	Tetratricopeptide repeats
RLV_RS13370	SM01043	Bacterial transcriptional activator domain
RLV_RS13420	SM00354	helix_turn _helix lactose operon repressor
RLV_RS13480	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS13545	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS13555	SM01091	Transporter associated domain
RLV_RS13570	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS13575	SM00563	Phosphate acyltransferases
RLV_RS13595	SM00932	Scaffold protein Nfu/NifU N terminal
RLV_RS13625	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RLV_RS13635	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
RLV_RS13635	SM00534	ATPase domain of DNA mismatch repair MUTS family
RLV_RS13640	SM00919	Malic enzyme, NAD binding domain
RLV_RS13640	SM01274	RLV_RS13640
RLV_RS13645	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS13655	SM00387	Histidine kinase-like ATPases
RLV_RS13655	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS13655	SM00448	cheY-homologous receiver domain
RLV_RS13665	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RLV_RS13695	SM00411	bacterial (prokaryotic) histone like domain
RLV_RS13715	SM00382	ATPases associated with a variety of cellular activities
RLV_RS13740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS13740	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS13760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS13825	SM00054	EF-hand, calcium binding motif
RLV_RS13835	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS13865	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
RLV_RS13870	SM00387	Histidine kinase-like ATPases
RLV_RS13870	SM00911	HWE histidine kinase
RLV_RS13885	SM00357	Cold shock protein domain
RLV_RS13910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS13910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS13915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS13915	SM00387	Histidine kinase-like ATPases
RLV_RS13990	SM00829	Enoylreductase
RLV_RS14075	SM00052	Putative diguanylate phosphodiesterase
RLV_RS14075	SM00267	diguanylate cyclase
RLV_RS14085	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS14120	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14135	SM00267	diguanylate cyclase
RLV_RS14205	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14245	SM00829	Enoylreductase
RLV_RS14255	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14275	SM00858	RLV_RS14275
RLV_RS14285	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS14285	SM00895	RLV_RS14285
RLV_RS14295	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14300	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS14410	SM00387	Histidine kinase-like ATPases
RLV_RS14410	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS14430	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14440	SM00448	cheY-homologous receiver domain
RLV_RS14440	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS14495	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS14495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS14500	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS14520	SM00421	helix_turn_helix, Lux Regulon
RLV_RS14520	SM00448	cheY-homologous receiver domain
RLV_RS14555	SM00028	Tetratricopeptide repeats
RLV_RS14585	SM00487	DEAD-like helicases superfamily
RLV_RS14585	SM00490	helicase superfamily c-terminal domain
RLV_RS14620	SM00671	Sel1-like repeats.
RLV_RS14665	SM00357	Cold shock protein domain
RLV_RS14670	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS14695	SM00387	Histidine kinase-like ATPases
RLV_RS14695	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS14695	SM00448	cheY-homologous receiver domain
RLV_RS14715	SM00052	Putative diguanylate phosphodiesterase
RLV_RS14715	SM00267	diguanylate cyclase
RLV_RS14780	SM00226	Low molecular weight phosphatase family
RLV_RS14815	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14835	SM00421	helix_turn_helix, Lux Regulon
RLV_RS14850	SM00354	helix_turn _helix lactose operon repressor
RLV_RS14860	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14865	SM00382	ATPases associated with a variety of cellular activities
RLV_RS14875	SM01192	RLV_RS14875
RLV_RS14875	SM01193	RLV_RS14875
RLV_RS14890	SM00829	Enoylreductase
RLV_RS14945	SM00822	RLV_RS14945
RLV_RS14950	SM00382	ATPases associated with a variety of cellular activities
RLV_RS15005	SM01133	RLV_RS15005
RLV_RS15025	SM00822	RLV_RS15025
RLV_RS15030	SM00829	Enoylreductase
RLV_RS15035	SM00354	helix_turn _helix lactose operon repressor
RLV_RS15070	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS15095	SM00710	Parallel beta-helix repeats
RLV_RS15120	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
RLV_RS15125	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
RLV_RS15160	SM00387	Histidine kinase-like ATPases
RLV_RS15160	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS15160	SM00448	cheY-homologous receiver domain
RLV_RS15165	SM00448	cheY-homologous receiver domain
RLV_RS15170	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS15170	SM00091	PAS domain
RLV_RS15170	SM00387	Histidine kinase-like ATPases
RLV_RS15170	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS15175	SM00448	cheY-homologous receiver domain
RLV_RS15180	SM00421	helix_turn_helix, Lux Regulon
RLV_RS15190	SM00387	Histidine kinase-like ATPases
RLV_RS15190	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS15220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS15230	SM00448	cheY-homologous receiver domain
RLV_RS15235	SM00073	Histidine Phosphotransfer domain
RLV_RS15235	SM00260	Two component signalling adaptor domain
RLV_RS15235	SM00387	Histidine kinase-like ATPases
RLV_RS15235	SM01231	RLV_RS15235
RLV_RS15240	SM00260	Two component signalling adaptor domain
RLV_RS15245	SM00138	Methyltransferase, chemotaxis proteins 
RLV_RS15250	SM00448	cheY-homologous receiver domain
RLV_RS15255	SM00448	cheY-homologous receiver domain
RLV_RS15275	SM00421	helix_turn_helix, Lux Regulon
RLV_RS15280	SM00421	helix_turn_helix, Lux Regulon
RLV_RS15320	SM00382	ATPases associated with a variety of cellular activities
RLV_RS15350	SM00858	RLV_RS15350
RLV_RS15430	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS15515	SM00354	helix_turn _helix lactose operon repressor
RLV_RS15535	SM00642	Alpha-amylase domain
RLV_RS15540	SM00382	ATPases associated with a variety of cellular activities
RLV_RS15570	SM01230	RLV_RS15570
RLV_RS15580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS15580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS15585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS15585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS15610	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS15620	SM00382	ATPases associated with a variety of cellular activities
RLV_RS15645	SM00091	PAS domain
RLV_RS15645	SM00387	Histidine kinase-like ATPases
RLV_RS15645	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS15665	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
RLV_RS15725	SM00382	ATPases associated with a variety of cellular activities
RLV_RS15730	SM00382	ATPases associated with a variety of cellular activities
RLV_RS15935	SM00382	ATPases associated with a variety of cellular activities
RLV_RS16010	SM00849	Metallo-beta-lactamase superfamily
RLV_RS16020	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS16020	SM01240	RLV_RS16020
RLV_RS16035	SM00822	RLV_RS16035
RLV_RS16090	SM00996	S-adenosyl-L-homocysteine hydrolase
RLV_RS16090	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RLV_RS16095	SM00829	Enoylreductase
RLV_RS16215	SM00883	Chaperonin 10 Kd subunit
RLV_RS16225	SM00904	Riboflavin kinase
RLV_RS16245	SM00363	S4 RNA-binding domain
RLV_RS16310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS16310	SM00895	RLV_RS16310
RLV_RS16320	SM00382	ATPases associated with a variety of cellular activities
RLV_RS16335	SM00853	MutL C terminal dimerisation domain
RLV_RS16335	SM01340	RLV_RS16335
RLV_RS16340	SM00091	PAS domain
RLV_RS16340	SM00448	cheY-homologous receiver domain
RLV_RS16345	SM00052	Putative diguanylate phosphodiesterase
RLV_RS16345	SM00267	diguanylate cyclase
RLV_RS16375	SM00346	helix_turn_helix isocitrate lyase regulation
RLV_RS16380	SM00421	helix_turn_helix, Lux Regulon
RLV_RS16440	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS16455	SM00852	Probable molybdopterin binding domain
RLV_RS16465	SM00028	Tetratricopeptide repeats
RLV_RS16520	SM01209	RLV_RS16520
RLV_RS16520	SM01210	RLV_RS16520
RLV_RS16535	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS16535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS16535	SM01049	RLV_RS16535
RLV_RS16550	SM00316	Ribosomal protein S1-like RNA-binding domain
RLV_RS16550	SM00732	Likely ribonuclease with RNase H fold.
RLV_RS16560	SM00855	Phosphoglycerate mutase family
RLV_RS16640	SM00363	S4 RNA-binding domain
RLV_RS16650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS16650	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS16660	SM00861	Transketolase, pyrimidine binding domain
RLV_RS16710	SM01329	RLV_RS16710
RLV_RS16740	SM00091	PAS domain
RLV_RS16740	SM00387	Histidine kinase-like ATPases
RLV_RS16740	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS16765	SM00382	ATPases associated with a variety of cellular activities
RLV_RS16785	SM00052	Putative diguanylate phosphodiesterase
RLV_RS16785	SM00267	diguanylate cyclase
RLV_RS16785	SM01079	RLV_RS16785
RLV_RS16795	SM00855	Phosphoglycerate mutase family
RLV_RS16805	SM00271	DnaJ molecular chaperone homology domain
RLV_RS16975	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS17055	SM00382	ATPases associated with a variety of cellular activities
RLV_RS17060	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS17085	SM00382	ATPases associated with a variety of cellular activities
RLV_RS17100	SM00886	Stress responsive A/B Barrel Domain
RLV_RS17130	SM00849	Metallo-beta-lactamase superfamily
RLV_RS17170	SM00052	Putative diguanylate phosphodiesterase
RLV_RS17170	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS17170	SM00267	diguanylate cyclase
RLV_RS17205	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS17205	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS17220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS17250	SM00478	endonuclease III
RLV_RS17335	SM00849	Metallo-beta-lactamase superfamily
RLV_RS17395	SM00563	Phosphate acyltransferases
RLV_RS17435	SM00421	helix_turn_helix, Lux Regulon
RLV_RS17505	SM00421	helix_turn_helix, Lux Regulon
RLV_RS17585	SM00387	Histidine kinase-like ATPases
RLV_RS17585	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS17590	SM00448	cheY-homologous receiver domain
RLV_RS17590	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS17595	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS17625	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS17660	SM00849	Metallo-beta-lactamase superfamily
RLV_RS17670	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS17780	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS17840	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS17860	SM00028	Tetratricopeptide repeats
RLV_RS17895	SM00822	RLV_RS17895
RLV_RS17900	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS17935	SM01007	Class II Aldolase and Adducin N-terminal domain
RLV_RS17945	SM00448	cheY-homologous receiver domain
RLV_RS17950	SM00387	Histidine kinase-like ATPases
RLV_RS17975	SM00829	Enoylreductase
RLV_RS18020	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS18055	SM00382	ATPases associated with a variety of cellular activities
RLV_RS18065	SM00235	Zinc-dependent metalloprotease
RLV_RS18145	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS18150	SM00354	helix_turn _helix lactose operon repressor
RLV_RS18225	SM00829	Enoylreductase
RLV_RS18315	SM00052	Putative diguanylate phosphodiesterase
RLV_RS18315	SM00267	diguanylate cyclase
RLV_RS18320	SM00829	Enoylreductase
RLV_RS18360	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS18360	SM01134	RLV_RS18360
RLV_RS18395	SM00710	Parallel beta-helix repeats
RLV_RS18400	SM00052	Putative diguanylate phosphodiesterase
RLV_RS18400	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS18400	SM00267	diguanylate cyclase
RLV_RS18450	SM00357	Cold shock protein domain
RLV_RS18470	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS18480	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS18500	SM00382	ATPases associated with a variety of cellular activities
RLV_RS18510	SM00382	ATPases associated with a variety of cellular activities
RLV_RS18555	SM01091	Transporter associated domain
RLV_RS18560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS18560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS18605	SM00829	Enoylreductase
RLV_RS18635	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS18740	SM00564	beta-propeller repeat
RLV_RS18890	SM00387	Histidine kinase-like ATPases
RLV_RS18890	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS18900	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS18990	SM00460	Transglutaminase/protease-like homologues
RLV_RS19015	SM00883	Chaperonin 10 Kd subunit
RLV_RS19045	SM00354	helix_turn _helix lactose operon repressor
RLV_RS19050	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS19055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS19095	SM00886	Stress responsive A/B Barrel Domain
RLV_RS19110	SM00448	cheY-homologous receiver domain
RLV_RS19110	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS19115	SM00387	Histidine kinase-like ATPases
RLV_RS19115	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS19150	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS19155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS19160	SM00448	cheY-homologous receiver domain
RLV_RS19160	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS19165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS19165	SM00387	Histidine kinase-like ATPases
RLV_RS19165	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS19180	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS19180	SM00387	Histidine kinase-like ATPases
RLV_RS19180	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS19215	SM00986	Uracil DNA glycosylase superfamily
RLV_RS19215	SM00987	UreE urease accessory protein, C-terminal domain 
RLV_RS19260	SM00344	helix_turn_helix ASNC type
RLV_RS19265	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS19265	SM00924	MgtE intracellular N domain
RLV_RS19270	SM00829	Enoylreductase
RLV_RS19285	SM00046	Diacylglycerol kinase catalytic domain (presumed)
RLV_RS19290	SM01230	RLV_RS19290
RLV_RS19310	SM00858	RLV_RS19310
RLV_RS19375	SM00028	Tetratricopeptide repeats
RLV_RS19505	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS19575	SM00857	Resolvase, N terminal domain
RLV_RS19625	SM01130	RLV_RS19625
RLV_RS19640	SM01409	RLV_RS19640
RLV_RS19645	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RLV_RS19645	SM00954	Region found in RelA / SpoT proteins
RLV_RS19670	SM00358	Double-stranded RNA binding motif
RLV_RS19670	SM00535	Ribonuclease III family
RLV_RS19680	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS19685	SM00448	cheY-homologous receiver domain
RLV_RS19705	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RLV_RS19710	SM00052	Putative diguanylate phosphodiesterase
RLV_RS19710	SM00267	diguanylate cyclase
RLV_RS19785	SM00382	ATPases associated with a variety of cellular activities
RLV_RS19805	SM00917	LeuA allosteric (dimerisation) domain
RLV_RS19835	SM00641	Glycosyl hydrolases family 25
RLV_RS19855	SM00382	ATPases associated with a variety of cellular activities
RLV_RS19865	SM01005	Alanine racemase, C-terminal domain
RLV_RS19870	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS19885	SM00382	ATPases associated with a variety of cellular activities
RLV_RS19920	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
RLV_RS19925	SM00822	RLV_RS19925
RLV_RS19930	SM00823	Phosphopantetheine attachment site
RLV_RS19935	SM00825	Beta-ketoacyl synthase
RLV_RS19950	SM00072	Guanylate kinase homologues.
RLV_RS19955	SM00650	Ribosomal RNA adenine dimethylases
RLV_RS19985	SM00014	Acid phosphatase homologues
RLV_RS20025	SM00382	ATPases associated with a variety of cellular activities
RLV_RS20040	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS20050	SM00382	ATPases associated with a variety of cellular activities
RLV_RS20055	SM00267	diguanylate cyclase
RLV_RS20070	SM00562	RLV_RS20070
RLV_RS20105	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RLV_RS20105	SM00465	GIY-YIG type nucleases (URI domain)
RLV_RS20130	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RLV_RS20195	SM00474	3'-5' exonuclease
RLV_RS20230	SM00434	DNA Topoisomerase IV
RLV_RS20245	SM00966	SpoVT / AbrB like domain 
RLV_RS20265	SM01004	Delta-aminolevulinic acid dehydratase
RLV_RS20275	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS20365	SM00411	bacterial (prokaryotic) histone like domain
RLV_RS20370	SM00422	helix_turn_helix, mercury resistance
RLV_RS20375	SM00448	cheY-homologous receiver domain
RLV_RS20380	SM00387	Histidine kinase-like ATPases
RLV_RS20380	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS20380	SM00448	cheY-homologous receiver domain
RLV_RS20525	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RLV_RS20575	SM00881	CoA binding domain
RLV_RS20635	SM00052	Putative diguanylate phosphodiesterase
RLV_RS20635	SM00267	diguanylate cyclase
RLV_RS20650	SM00267	diguanylate cyclase
RLV_RS20660	SM00382	ATPases associated with a variety of cellular activities
RLV_RS20660	SM00994	ClpX C4-type zinc finger
RLV_RS20660	SM01086	C-terminal, D2-small domain, of ClpB protein
RLV_RS20665	SM00382	ATPases associated with a variety of cellular activities
RLV_RS20665	SM00464	Found in ATP-dependent protease La (LON)
RLV_RS20670	SM00411	bacterial (prokaryotic) histone like domain
RLV_RS20765	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RLV_RS20775	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RLV_RS20820	SM00849	Metallo-beta-lactamase superfamily
RLV_RS20850	SM00382	ATPases associated with a variety of cellular activities
RLV_RS20860	SM00481	DNA polymerase alpha chain like domain
RLV_RS20890	SM00448	cheY-homologous receiver domain
RLV_RS20895	SM00267	diguanylate cyclase
RLV_RS20895	SM00448	cheY-homologous receiver domain
RLV_RS20915	SM00316	Ribosomal protein S1-like RNA-binding domain
RLV_RS20915	SM00955	RLV_RS20915
RLV_RS20920	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
RLV_RS20920	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
RLV_RS20920	SM00493	RLV_RS20920
RLV_RS20930	SM01207	RLV_RS20930
RLV_RS20960	SM00646	RLV_RS20960
RLV_RS21070	SM00967	RNA 2'-O ribose methyltransferase substrate binding
RLV_RS21105	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
RLV_RS21105	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RLV_RS21110	SM00649	Ribosomal protein L11/L12
RLV_RS21135	SM00663	RNA polymerase I subunit A N-terminus
RLV_RS21155	SM00838	Elongation factor G C-terminus
RLV_RS21155	SM00889	Elongation factor G, domain IV
RLV_RS21165	SM01403	RLV_RS21165
RLV_RS21185	SM01382	RLV_RS21185
RLV_RS21185	SM01383	RLV_RS21185
RLV_RS21200	SM00322	K homology RNA-binding domain
RLV_RS21220	SM01374	RLV_RS21220
RLV_RS21225	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
RLV_RS21290	SM00662	RNA polymerases D
RLV_RS21345	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS21350	SM00382	ATPases associated with a variety of cellular activities
RLV_RS21375	SM01130	RLV_RS21375
RLV_RS21410	SM00091	PAS domain
RLV_RS21410	SM00387	Histidine kinase-like ATPases
RLV_RS21410	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS21415	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS21435	SM00354	helix_turn _helix lactose operon repressor
RLV_RS21440	SM00882	Coenzyme A transferase
RLV_RS21470	SM00382	ATPases associated with a variety of cellular activities
RLV_RS21520	SM00421	helix_turn_helix, Lux Regulon
RLV_RS21520	SM00448	cheY-homologous receiver domain
RLV_RS21525	SM00387	Histidine kinase-like ATPases
RLV_RS21570	SM00344	helix_turn_helix ASNC type
RLV_RS21575	SM00344	helix_turn_helix ASNC type
RLV_RS21635	SM00852	Probable molybdopterin binding domain
RLV_RS21665	SM00267	diguanylate cyclase
RLV_RS21715	SM00344	helix_turn_helix ASNC type
RLV_RS21720	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RLV_RS21720	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RLV_RS21725	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS21730	SM00822	RLV_RS21730
RLV_RS21735	SM00903	Flavin reductase like domain
RLV_RS21760	SM00450	Rhodanese Homology Domain
RLV_RS21765	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RLV_RS21820	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RLV_RS21845	SM00448	cheY-homologous receiver domain
RLV_RS21845	SM01012	RLV_RS21845
RLV_RS21855	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS21920	SM00382	ATPases associated with a variety of cellular activities
RLV_RS21970	SM01060	RLV_RS21970
RLV_RS22045	SM00671	Sel1-like repeats.
RLV_RS22060	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RLV_RS22065	SM00836	DALR anticodon binding domain
RLV_RS22065	SM01016	Arginyl tRNA synthetase N terminal dom
RLV_RS22120	SM00257	Lysin motif
RLV_RS22130	SM01323	RLV_RS22130
RLV_RS22195	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS22230	SM00732	Likely ribonuclease with RNase H fold.
RLV_RS22240	SM00849	Metallo-beta-lactamase superfamily
RLV_RS22280	SM00845	GatB domain
RLV_RS22315	SM00878	Biotin carboxylase C-terminal domain
RLV_RS22415	SM00357	Cold shock protein domain
RLV_RS22445	SM00710	Parallel beta-helix repeats
RLV_RS22540	SM00382	ATPases associated with a variety of cellular activities
RLV_RS22555	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS22580	SM00971	Serine acetyltransferase, N-terminal
RLV_RS22600	SM00382	ATPases associated with a variety of cellular activities
RLV_RS22600	SM01086	C-terminal, D2-small domain, of ClpB protein
RLV_RS22660	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS22720	SM01192	RLV_RS22720
RLV_RS22720	SM01193	RLV_RS22720
RLV_RS22735	SM00861	Transketolase, pyrimidine binding domain
RLV_RS22770	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS22805	SM00387	Histidine kinase-like ATPases
RLV_RS22805	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS22810	SM00382	ATPases associated with a variety of cellular activities
RLV_RS22810	SM00448	cheY-homologous receiver domain
RLV_RS22825	SM00054	EF-hand, calcium binding motif
RLV_RS22845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS22845	SM00387	Histidine kinase-like ATPases
RLV_RS22845	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS22850	SM00382	ATPases associated with a variety of cellular activities
RLV_RS22850	SM00448	cheY-homologous receiver domain
RLV_RS22910	SM00849	Metallo-beta-lactamase superfamily
RLV_RS22970	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS22995	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS23035	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23055	SM01130	RLV_RS23055
RLV_RS23065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS23065	SM00895	RLV_RS23065
RLV_RS23085	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23090	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23095	SM00354	helix_turn _helix lactose operon repressor
RLV_RS23120	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23200	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS23215	SM00895	RLV_RS23215
RLV_RS23230	SM00829	Enoylreductase
RLV_RS23235	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23260	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23275	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS23275	SM00895	RLV_RS23275
RLV_RS23295	SM00487	DEAD-like helicases superfamily
RLV_RS23295	SM00490	helicase superfamily c-terminal domain
RLV_RS23305	SM00487	DEAD-like helicases superfamily
RLV_RS23305	SM00490	helicase superfamily c-terminal domain
RLV_RS23305	SM00982	RLV_RS23305
RLV_RS23305	SM01058	CarD-like/TRCF domain
RLV_RS23330	SM00992	Hemimethylated DNA-binding protein YccV like
RLV_RS23335	SM01230	RLV_RS23335
RLV_RS23340	SM00938	Nitrogen regulatory protein P-II
RLV_RS23380	SM00434	DNA Topoisomerase IV
RLV_RS23420	SM00825	Beta-ketoacyl synthase
RLV_RS23475	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS23490	SM01207	RLV_RS23490
RLV_RS23495	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS23515	SM00028	Tetratricopeptide repeats
RLV_RS23515	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS23530	SM00354	helix_turn _helix lactose operon repressor
RLV_RS23540	SM00382	ATPases associated with a variety of cellular activities
RLV_RS23580	SM00797	Allophanate hydrolase subunit 2
RLV_RS23585	SM00796	Allophanate hydrolase subunit 1
RLV_RS23625	SM00849	Metallo-beta-lactamase superfamily
RLV_RS23655	SM00936	Penicillin-binding protein 5, C-terminal domain 
RLV_RS23710	SM00460	Transglutaminase/protease-like homologues
RLV_RS23715	SM00460	Transglutaminase/protease-like homologues
RLV_RS23755	SM00852	Probable molybdopterin binding domain
RLV_RS23775	SM00487	DEAD-like helicases superfamily
RLV_RS23775	SM00490	helicase superfamily c-terminal domain
RLV_RS23780	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS23780	SM01080	RLV_RS23780
RLV_RS23825	SM00387	Histidine kinase-like ATPases
RLV_RS23825	SM00433	TopoisomeraseII
RLV_RS23855	SM00903	Flavin reductase like domain
RLV_RS23870	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RLV_RS23880	SM01234	RLV_RS23880
RLV_RS23905	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS23985	SM00422	helix_turn_helix, mercury resistance
RLV_RS23990	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS23990	SM00924	MgtE intracellular N domain
RLV_RS24035	SM00878	Biotin carboxylase C-terminal domain
RLV_RS24140	SM00641	Glycosyl hydrolases family 25
RLV_RS24175	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24245	SM00487	DEAD-like helicases superfamily
RLV_RS24245	SM00490	helicase superfamily c-terminal domain
RLV_RS24260	SM00903	Flavin reductase like domain
RLV_RS24285	SM00998	Adenylosuccinate lyase C-terminus
RLV_RS24305	SM00052	Putative diguanylate phosphodiesterase
RLV_RS24305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS24305	SM00091	PAS domain
RLV_RS24305	SM00267	diguanylate cyclase
RLV_RS24325	SM01211	RLV_RS24325
RLV_RS24340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS24420	SM00363	S4 RNA-binding domain
RLV_RS24420	SM01390	RLV_RS24420
RLV_RS24425	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24455	SM01329	RLV_RS24455
RLV_RS24470	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS24470	SM00871	Bacterial transcription activator, effector binding domain
RLV_RS24480	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
RLV_RS24485	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24500	SM00091	PAS domain
RLV_RS24500	SM00387	Histidine kinase-like ATPases
RLV_RS24500	SM00448	cheY-homologous receiver domain
RLV_RS24525	SM00855	Phosphoglycerate mutase family
RLV_RS24550	SM00905	Dihydroneopterin aldolase
RLV_RS24595	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS24595	SM00267	diguanylate cyclase
RLV_RS24610	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24620	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS24640	SM00855	Phosphoglycerate mutase family
RLV_RS24650	SM00919	Malic enzyme, NAD binding domain
RLV_RS24650	SM01274	RLV_RS24650
RLV_RS24670	SM00822	RLV_RS24670
RLV_RS24680	SM00014	Acid phosphatase homologues
RLV_RS24700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS24700	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS24745	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24820	SM00267	diguanylate cyclase
RLV_RS24835	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS24850	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS24870	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24885	SM00861	Transketolase, pyrimidine binding domain
RLV_RS24905	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24925	SM00822	RLV_RS24925
RLV_RS24945	SM00387	Histidine kinase-like ATPases
RLV_RS24945	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS24945	SM00448	cheY-homologous receiver domain
RLV_RS24950	SM00382	ATPases associated with a variety of cellular activities
RLV_RS24985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS24985	SM00387	Histidine kinase-like ATPases
RLV_RS24985	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS24990	SM00448	cheY-homologous receiver domain
RLV_RS24990	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS25010	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS25010	SM01134	RLV_RS25010
RLV_RS25015	SM01133	RLV_RS25015
RLV_RS25030	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS25030	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RLV_RS25055	SM00028	Tetratricopeptide repeats
RLV_RS25065	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS25095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS25100	SM00382	ATPases associated with a variety of cellular activities
RLV_RS25120	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS25155	SM00344	helix_turn_helix ASNC type
RLV_RS25160	SM00986	Uracil DNA glycosylase superfamily
RLV_RS25160	SM00987	UreE urease accessory protein, C-terminal domain 
RLV_RS25165	SM00318	Staphylococcal nuclease homologues
RLV_RS25170	SM00387	Histidine kinase-like ATPases
RLV_RS25170	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS25220	SM00382	ATPases associated with a variety of cellular activities
RLV_RS25250	SM00382	ATPases associated with a variety of cellular activities
RLV_RS25270	SM00354	helix_turn _helix lactose operon repressor
RLV_RS25320	SM01350	RLV_RS25320
RLV_RS25325	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS25350	SM00829	Enoylreductase
RLV_RS25355	SM00825	Beta-ketoacyl synthase
RLV_RS25375	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS25375	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS25430	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS25445	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS25460	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS25480	SM00421	helix_turn_helix, Lux Regulon
RLV_RS25485	SM00822	RLV_RS25485
RLV_RS25575	SM00487	DEAD-like helicases superfamily
RLV_RS25585	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS25590	SM00267	diguanylate cyclase
RLV_RS25590	SM00448	cheY-homologous receiver domain
RLV_RS25595	SM00448	cheY-homologous receiver domain
RLV_RS25620	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS25660	SM00387	Histidine kinase-like ATPases
RLV_RS25660	SM00448	cheY-homologous receiver domain
RLV_RS25695	SM00382	ATPases associated with a variety of cellular activities
RLV_RS25700	SM00382	ATPases associated with a variety of cellular activities
RLV_RS25705	SM01120	RLV_RS25705
RLV_RS25710	SM01120	RLV_RS25710
RLV_RS25770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS25770	SM00895	RLV_RS25770
RLV_RS25810	SM00382	ATPases associated with a variety of cellular activities
RLV_RS25815	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS25820	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS25825	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS25870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS25870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS25870	SM01049	RLV_RS25870
RLV_RS25940	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS25945	SM00822	RLV_RS25945
RLV_RS25970	SM00448	cheY-homologous receiver domain
RLV_RS25985	SM00248	ankyrin repeats
RLV_RS25995	SM00028	Tetratricopeptide repeats
RLV_RS26000	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS26040	SM00487	DEAD-like helicases superfamily
RLV_RS26040	SM00490	helicase superfamily c-terminal domain
RLV_RS26050	SM00112	Cadherin repeats.
RLV_RS26055	SM00112	Cadherin repeats.
RLV_RS26065	SM00357	Cold shock protein domain
RLV_RS26075	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS26135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS26135	SM00387	Histidine kinase-like ATPases
RLV_RS26135	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS26140	SM00448	cheY-homologous receiver domain
RLV_RS26140	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS26150	SM00382	ATPases associated with a variety of cellular activities
RLV_RS26225	SM00344	helix_turn_helix ASNC type
RLV_RS26270	SM00382	ATPases associated with a variety of cellular activities
RLV_RS26325	SM00226	Low molecular weight phosphatase family
RLV_RS26360	SM00363	S4 RNA-binding domain
RLV_RS26420	SM00710	Parallel beta-helix repeats
RLV_RS26420	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
RLV_RS26425	SM00710	Parallel beta-helix repeats
RLV_RS26450	SM00382	ATPases associated with a variety of cellular activities
RLV_RS26465	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS26500	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS26575	SM00671	Sel1-like repeats.
RLV_RS26580	SM00849	Metallo-beta-lactamase superfamily
RLV_RS26595	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS26595	SM00911	HWE histidine kinase
RLV_RS26600	SM00448	cheY-homologous receiver domain
RLV_RS26625	SM00028	Tetratricopeptide repeats
RLV_RS26625	SM01043	Bacterial transcriptional activator domain
RLV_RS26650	SM00448	cheY-homologous receiver domain
RLV_RS26650	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS26655	SM00387	Histidine kinase-like ATPases
RLV_RS26680	SM00864	Tubulin/FtsZ family, GTPase domain
RLV_RS26680	SM00865	Tubulin/FtsZ family, C-terminal domain
RLV_RS26700	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS26760	SM00052	Putative diguanylate phosphodiesterase
RLV_RS26760	SM00267	diguanylate cyclase
RLV_RS26775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS26775	SM00331	Sigma factor PP2C-like phosphatases
RLV_RS26790	SM00344	helix_turn_helix ASNC type
RLV_RS26830	SM00382	ATPases associated with a variety of cellular activities
RLV_RS26875	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS26880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS26880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS26890	SM00448	cheY-homologous receiver domain
RLV_RS26895	SM00387	Histidine kinase-like ATPases
RLV_RS26895	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS26945	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS26965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS26970	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS27035	SM00028	Tetratricopeptide repeats
RLV_RS27040	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS27040	SM01080	RLV_RS27040
RLV_RS27100	SM00382	ATPases associated with a variety of cellular activities
RLV_RS27110	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS27130	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS27130	SM01091	Transporter associated domain
RLV_RS27140	SM00450	Rhodanese Homology Domain
RLV_RS27185	SM00382	ATPases associated with a variety of cellular activities
RLV_RS27255	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS27260	SM00829	Enoylreductase
RLV_RS27270	SM00889	Elongation factor G, domain IV
RLV_RS27280	SM00344	helix_turn_helix ASNC type
RLV_RS27290	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS27320	SM00421	helix_turn_helix, Lux Regulon
RLV_RS27320	SM00422	helix_turn_helix, mercury resistance
RLV_RS27355	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS27365	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS27450	SM01130	RLV_RS27450
RLV_RS27460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS27475	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS27480	SM00244	prohibitin homologues
RLV_RS27485	SM00244	prohibitin homologues
RLV_RS27550	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS27595	SM00763	PrkA AAA domain
RLV_RS27665	SM00260	Two component signalling adaptor domain
RLV_RS27675	SM00479	RLV_RS27675
RLV_RS27685	SM00278	Helix-hairpin-helix DNA-binding motif class 1
RLV_RS27685	SM00292	breast cancer carboxy-terminal domain
RLV_RS27685	SM00532	Ligase N family
RLV_RS27710	SM00864	Tubulin/FtsZ family, GTPase domain
RLV_RS27710	SM00865	Tubulin/FtsZ family, C-terminal domain
RLV_RS27715	SM00842	Cell division protein FtsA
RLV_RS27825	SM00644	RLV_RS27825
RLV_RS27830	SM00271	DnaJ molecular chaperone homology domain
RLV_RS27865	SM00641	Glycosyl hydrolases family 25
RLV_RS27885	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS27890	SM00382	ATPases associated with a variety of cellular activities
RLV_RS27940	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS27950	SM00382	ATPases associated with a variety of cellular activities
RLV_RS27970	SM01230	RLV_RS27970
RLV_RS28005	SM00382	ATPases associated with a variety of cellular activities
RLV_RS28015	SM00382	ATPases associated with a variety of cellular activities
RLV_RS28045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS28045	SM00866	RLV_RS28045
RLV_RS28050	SM01018	B12 binding domain
RLV_RS28070	SM00903	Flavin reductase like domain
RLV_RS28095	SM00382	ATPases associated with a variety of cellular activities
RLV_RS28100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS28100	SM00895	RLV_RS28100
RLV_RS28135	SM00421	helix_turn_helix, Lux Regulon
RLV_RS28150	SM00448	cheY-homologous receiver domain
RLV_RS28255	SM00829	Enoylreductase
RLV_RS28265	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS28285	SM00873	B3/4 domain
RLV_RS28295	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS28335	SM00829	Enoylreductase
RLV_RS28350	SM00341	Helicase and RNase D C-terminal
RLV_RS28350	SM00487	DEAD-like helicases superfamily
RLV_RS28350	SM00490	helicase superfamily c-terminal domain
RLV_RS28350	SM00956	RLV_RS28350
RLV_RS28355	SM00400	zinc finger
RLV_RS28355	SM00493	RLV_RS28355
RLV_RS28375	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
RLV_RS28410	SM00869	Autotransporter beta-domain
RLV_RS28420	SM00850	LytTr DNA-binding domain
RLV_RS28425	SM00851	MGS-like domain
RLV_RS28425	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
RLV_RS28430	SM00986	Uracil DNA glycosylase superfamily
RLV_RS28430	SM00987	UreE urease accessory protein, C-terminal domain 
RLV_RS28435	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS28455	SM00387	Histidine kinase-like ATPases
RLV_RS28455	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS28460	SM00382	ATPases associated with a variety of cellular activities
RLV_RS28460	SM00448	cheY-homologous receiver domain
RLV_RS28465	SM00344	helix_turn_helix ASNC type
RLV_RS28480	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS28540	SM00327	von Willebrand factor (vWF) type A domain
RLV_RS28540	SM00609	Vault protein Inter-alpha-Trypsin domain
RLV_RS28565	SM00357	Cold shock protein domain
RLV_RS28575	SM00822	RLV_RS28575
RLV_RS28585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS28585	SM00387	Histidine kinase-like ATPases
RLV_RS28585	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS28590	SM00448	cheY-homologous receiver domain
RLV_RS28590	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS28595	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS28615	SM00849	Metallo-beta-lactamase superfamily
RLV_RS28665	SM01400	RLV_RS28665
RLV_RS28685	SM00052	Putative diguanylate phosphodiesterase
RLV_RS28685	SM00091	PAS domain
RLV_RS28685	SM00267	diguanylate cyclase
RLV_RS28685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS28690	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS28755	SM00382	ATPases associated with a variety of cellular activities
RLV_RS28765	SM00382	ATPases associated with a variety of cellular activities
RLV_RS28875	SM00829	Enoylreductase
RLV_RS28885	SM00917	LeuA allosteric (dimerisation) domain
RLV_RS28980	SM00421	helix_turn_helix, Lux Regulon
RLV_RS29015	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29025	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS29035	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
RLV_RS29050	SM00642	Alpha-amylase domain
RLV_RS29070	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29075	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29095	SM01230	RLV_RS29095
RLV_RS29110	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS29185	SM01092	CO dehydrogenase flavoprotein C-terminal domain
RLV_RS29190	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
RLV_RS29265	SM00244	prohibitin homologues
RLV_RS29315	SM00091	PAS domain
RLV_RS29315	SM00387	Histidine kinase-like ATPases
RLV_RS29315	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS29315	SM00448	cheY-homologous receiver domain
RLV_RS29330	SM01130	RLV_RS29330
RLV_RS29335	SM00354	helix_turn _helix lactose operon repressor
RLV_RS29345	SM00487	DEAD-like helicases superfamily
RLV_RS29345	SM00490	helicase superfamily c-terminal domain
RLV_RS29365	SM00460	Transglutaminase/protease-like homologues
RLV_RS29390	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29435	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29460	SM00028	Tetratricopeptide repeats
RLV_RS29460	SM00450	Rhodanese Homology Domain
RLV_RS29490	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29530	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS29550	SM00633	Glycosyl hydrolase family 10
RLV_RS29620	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29625	SM00710	Parallel beta-helix repeats
RLV_RS29625	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
RLV_RS29665	SM00984	UDP binding domain
RLV_RS29695	SM00986	Uracil DNA glycosylase superfamily
RLV_RS29695	SM00987	UreE urease accessory protein, C-terminal domain 
RLV_RS29740	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29765	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS29850	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29875	SM00448	cheY-homologous receiver domain
RLV_RS29880	SM00911	HWE histidine kinase
RLV_RS29895	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS29900	SM00450	Rhodanese Homology Domain
RLV_RS29905	SM00829	Enoylreductase
RLV_RS29920	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS29920	SM00448	cheY-homologous receiver domain
RLV_RS29920	SM00911	HWE histidine kinase
RLV_RS29950	SM00382	ATPases associated with a variety of cellular activities
RLV_RS29980	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS29980	SM00419	helix_turn_helix, cAMP Regulatory protein
RLV_RS29995	SM00988	UreE urease accessory protein, N-terminal domain
RLV_RS30000	SM00267	diguanylate cyclase
RLV_RS30045	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30050	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30070	SM00014	Acid phosphatase homologues
RLV_RS30075	SM00387	Histidine kinase-like ATPases
RLV_RS30075	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS30075	SM00448	cheY-homologous receiver domain
RLV_RS30080	SM00421	helix_turn_helix, Lux Regulon
RLV_RS30080	SM00448	cheY-homologous receiver domain
RLV_RS30100	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30105	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30165	SM00448	cheY-homologous receiver domain
RLV_RS30165	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS30170	SM00448	cheY-homologous receiver domain
RLV_RS30200	SM00363	S4 RNA-binding domain
RLV_RS30215	SM00788	Adenylosuccinate synthetase
RLV_RS30230	SM00052	Putative diguanylate phosphodiesterase
RLV_RS30230	SM00267	diguanylate cyclase
RLV_RS30265	SM00822	RLV_RS30265
RLV_RS30270	SM00822	RLV_RS30270
RLV_RS30300	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS30350	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30400	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30500	SM00564	beta-propeller repeat
RLV_RS30540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS30540	SM00895	RLV_RS30540
RLV_RS30555	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30610	SM00363	S4 RNA-binding domain
RLV_RS30650	SM00354	helix_turn _helix lactose operon repressor
RLV_RS30685	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30685	SM00448	cheY-homologous receiver domain
RLV_RS30690	SM00387	Histidine kinase-like ATPases
RLV_RS30690	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS30715	SM00855	Phosphoglycerate mutase family
RLV_RS30720	SM00052	Putative diguanylate phosphodiesterase
RLV_RS30720	SM00267	diguanylate cyclase
RLV_RS30745	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS30770	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30775	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30795	SM00052	Putative diguanylate phosphodiesterase
RLV_RS30795	SM00091	PAS domain
RLV_RS30795	SM00267	diguanylate cyclase
RLV_RS30830	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS30925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS30940	SM00966	SpoVT / AbrB like domain 
RLV_RS30950	SM00382	ATPases associated with a variety of cellular activities
RLV_RS30990	SM01350	RLV_RS30990
RLV_RS31000	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS31005	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS31035	SM00861	Transketolase, pyrimidine binding domain
RLV_RS31040	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
RLV_RS31055	SM01091	Transporter associated domain
RLV_RS31095	SM00382	ATPases associated with a variety of cellular activities
RLV_RS31145	SM00822	RLV_RS31145
RLV_RS31150	SM00448	cheY-homologous receiver domain
RLV_RS31155	SM00138	Methyltransferase, chemotaxis proteins 
RLV_RS31160	SM00260	Two component signalling adaptor domain
RLV_RS31165	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS31165	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS31170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS31170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS31175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS31175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS31180	SM00260	Two component signalling adaptor domain
RLV_RS31185	SM00073	Histidine Phosphotransfer domain
RLV_RS31185	SM00260	Two component signalling adaptor domain
RLV_RS31185	SM00387	Histidine kinase-like ATPases
RLV_RS31185	SM01231	RLV_RS31185
RLV_RS31190	SM00448	cheY-homologous receiver domain
RLV_RS31205	SM00671	Sel1-like repeats.
RLV_RS31220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS31235	SM01001	AIR carboxylase
RLV_RS31250	SM00028	Tetratricopeptide repeats
RLV_RS31265	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS31285	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS31350	SM00382	ATPases associated with a variety of cellular activities
RLV_RS31350	SM00448	cheY-homologous receiver domain
RLV_RS31395	SM00257	Lysin motif
RLV_RS31405	SM00244	prohibitin homologues
RLV_RS31415	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS31490	SM00448	cheY-homologous receiver domain
RLV_RS31570	SM00028	Tetratricopeptide repeats
RLV_RS31575	SM00448	cheY-homologous receiver domain
RLV_RS31575	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS31580	SM00387	Histidine kinase-like ATPases
RLV_RS31580	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS31585	SM00460	Transglutaminase/protease-like homologues
RLV_RS31595	SM00460	Transglutaminase/protease-like homologues
RLV_RS31610	SM00642	Alpha-amylase domain
RLV_RS31630	SM00642	Alpha-amylase domain
RLV_RS31675	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS31675	SM01080	RLV_RS31675
RLV_RS31680	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS31690	SM00028	Tetratricopeptide repeats
RLV_RS31695	SM00911	HWE histidine kinase
RLV_RS31715	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
RLV_RS31715	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
RLV_RS31735	SM00052	Putative diguanylate phosphodiesterase
RLV_RS31735	SM00091	PAS domain
RLV_RS31735	SM00267	diguanylate cyclase
RLV_RS31765	SM00354	helix_turn _helix lactose operon repressor
RLV_RS31770	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS31780	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS31785	SM00320	WD40 repeats
RLV_RS31795	SM00971	Serine acetyltransferase, N-terminal
RLV_RS31800	SM00267	diguanylate cyclase
RLV_RS31855	SM01118	RLV_RS31855
RLV_RS31860	SM00880	RLV_RS31860
RLV_RS31870	SM00450	Rhodanese Homology Domain
RLV_RS31875	SM00052	Putative diguanylate phosphodiesterase
RLV_RS31875	SM00267	diguanylate cyclase
RLV_RS31910	SM00382	ATPases associated with a variety of cellular activities
RLV_RS31915	SM00354	helix_turn _helix lactose operon repressor
RLV_RS31930	SM00354	helix_turn _helix lactose operon repressor
RLV_RS31950	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS31950	SM00871	Bacterial transcription activator, effector binding domain
RLV_RS31990	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32020	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS32020	SM00387	Histidine kinase-like ATPases
RLV_RS32020	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS32025	SM00448	cheY-homologous receiver domain
RLV_RS32025	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS32045	SM00028	Tetratricopeptide repeats
RLV_RS32050	SM00849	Metallo-beta-lactamase superfamily
RLV_RS32080	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS32090	SM00478	endonuclease III
RLV_RS32130	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32190	SM00822	RLV_RS32190
RLV_RS32205	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS32215	SM00895	RLV_RS32215
RLV_RS32220	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
RLV_RS32230	SM00822	RLV_RS32230
RLV_RS32235	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS32240	SM00354	helix_turn _helix lactose operon repressor
RLV_RS32250	SM00822	RLV_RS32250
RLV_RS32270	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32295	SM00354	helix_turn _helix lactose operon repressor
RLV_RS32305	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32325	SM00354	helix_turn _helix lactose operon repressor
RLV_RS32345	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
RLV_RS32375	SM00422	helix_turn_helix, mercury resistance
RLV_RS32445	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS32445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
RLV_RS32455	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS32465	SM01068	Putative carbohydrate binding domain
RLV_RS32545	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RLV_RS32550	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RLV_RS32550	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RLV_RS32555	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS32605	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32605	SM01086	C-terminal, D2-small domain, of ClpB protein
RLV_RS32620	SM00937	RLV_RS32620
RLV_RS32625	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
RLV_RS32700	SM00957	SecA DEAD-like domain
RLV_RS32700	SM00958	SecA preprotein cross-linking domain
RLV_RS32760	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS32780	SM00507	HNH nucleases
RLV_RS32785	SM00478	endonuclease III
RLV_RS32825	SM00893	Electron transfer flavoprotein domain
RLV_RS32830	SM00893	Electron transfer flavoprotein domain
RLV_RS32870	SM00448	cheY-homologous receiver domain
RLV_RS32885	SM00382	ATPases associated with a variety of cellular activities
RLV_RS32900	SM00563	Phosphate acyltransferases
RLV_RS32935	SM00849	Metallo-beta-lactamase superfamily
RLV_RS32975	SM00327	von Willebrand factor (vWF) type A domain
RLV_RS32985	SM00271	DnaJ molecular chaperone homology domain
RLV_RS32995	SM00116	Domain in cystathionine beta-synthase and other proteins.
RLV_RS32995	SM01091	Transporter associated domain
RLV_RS33035	SM00833	Cobalamin synthesis protein cobW C-terminal domain
RLV_RS33095	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33120	SM00354	helix_turn _helix lactose operon repressor
RLV_RS33145	SM00344	helix_turn_helix ASNC type
RLV_RS33165	SM00260	Two component signalling adaptor domain
RLV_RS33170	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
RLV_RS33170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
RLV_RS33185	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
RLV_RS33185	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
RLV_RS33190	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
RLV_RS33205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
RLV_RS33210	SM00822	RLV_RS33210
RLV_RS33215	SM00422	helix_turn_helix, mercury resistance
RLV_RS33235	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33265	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33290	SM00487	DEAD-like helicases superfamily
RLV_RS33290	SM00490	helicase superfamily c-terminal domain
RLV_RS33295	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33300	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS33325	SM00895	RLV_RS33325
RLV_RS33345	SM01130	RLV_RS33345
RLV_RS33355	SM00563	Phosphate acyltransferases
RLV_RS33400	SM00822	RLV_RS33400
RLV_RS33425	SM00861	Transketolase, pyrimidine binding domain
RLV_RS33430	SM00881	CoA binding domain
RLV_RS33500	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33525	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS33580	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33585	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33610	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS33610	SM00895	RLV_RS33610
RLV_RS33615	SM00895	RLV_RS33615
RLV_RS33620	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS33630	SM01130	RLV_RS33630
RLV_RS33640	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33730	SM01152	RLV_RS33730
RLV_RS33780	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS33785	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS33790	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS33800	SM00822	RLV_RS33800
RLV_RS33825	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33865	SM00226	Low molecular weight phosphatase family
RLV_RS33880	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33915	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33950	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33950	SM00962	SRP54-type protein, GTPase domain
RLV_RS33950	SM00963	SRP54-type protein, helical bundle domain
RLV_RS33955	SM00729	Elongator protein 3, MiaB family, Radical SAM
RLV_RS33975	SM00382	ATPases associated with a variety of cellular activities
RLV_RS33975	SM00962	SRP54-type protein, GTPase domain
RLV_RS33975	SM00963	SRP54-type protein, helical bundle domain
RLV_RS33980	SM00830	Chorismate mutase type II
RLV_RS34005	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS34005	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
RLV_RS34040	SM00448	cheY-homologous receiver domain
RLV_RS34040	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS34045	SM00100	Cyclic nucleotide-monophosphate binding domain
RLV_RS34060	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34060	SM00843	RLV_RS34060
RLV_RS34070	SM00938	Nitrogen regulatory protein P-II
RLV_RS34090	SM00464	Found in ATP-dependent protease La (LON)
RLV_RS34140	SM00857	Resolvase, N terminal domain
RLV_RS34185	SM00822	RLV_RS34185
RLV_RS34205	SM00849	Metallo-beta-lactamase superfamily
RLV_RS34240	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS34250	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS34250	SM00895	RLV_RS34250
RLV_RS34280	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34290	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34315	SM01150	RLV_RS34315
RLV_RS34385	SM00841	Elongation factor P, C-terminal
RLV_RS34385	SM01185	RLV_RS34385
RLV_RS34390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS34390	SM00895	RLV_RS34390
RLV_RS34395	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS34405	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34430	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS34430	SM00866	RLV_RS34430
RLV_RS34455	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34460	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
RLV_RS34465	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS34485	SM01058	CarD-like/TRCF domain
RLV_RS34495	SM00363	S4 RNA-binding domain
RLV_RS34500	SM00490	helicase superfamily c-terminal domain
RLV_RS34515	SM00822	RLV_RS34515
RLV_RS34595	SM00420	helix_turn_helix, Deoxyribose operon repressor
RLV_RS34595	SM01134	RLV_RS34595
RLV_RS34605	SM00062	Bacterial periplasmic substrate-binding proteins
RLV_RS34615	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34630	SM00878	Biotin carboxylase C-terminal domain
RLV_RS34635	SM00421	helix_turn_helix, Lux Regulon
RLV_RS34640	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34675	SM01068	Putative carbohydrate binding domain
RLV_RS34685	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34690	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34720	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34805	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
RLV_RS34830	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34855	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
RLV_RS34855	SM00245	tail specific protease
RLV_RS34880	SM00481	DNA polymerase alpha chain like domain
RLV_RS34925	SM01329	RLV_RS34925
RLV_RS34930	SM00014	Acid phosphatase homologues
RLV_RS34945	SM00382	ATPases associated with a variety of cellular activities
RLV_RS34955	SM00098	Alkaline phosphatase homologues
RLV_RS34965	SM00859	Semialdehyde dehydrogenase, NAD binding domain
RLV_RS34975	SM00267	diguanylate cyclase
RLV_RS34980	SM00947	Carbonic anhydrase
RLV_RS35010	SM00798	AICARFT/IMPCHase bienzyme
RLV_RS35010	SM00851	MGS-like domain
RLV_RS35075	SM00470	ParB-like nuclease domain
RLV_RS35090	SM01228	RLV_RS35090
RLV_RS35095	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35100	SM00357	Cold shock protein domain
RLV_RS35100	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35100	SM00959	Rho termination factor, N-terminal domain
RLV_RS35140	SM00479	RLV_RS35140
RLV_RS35155	SM00978	RLV_RS35155
RLV_RS35160	SM00925	MltA specific insert domain
RLV_RS35165	SM00463	Small MutS-related domain
RLV_RS35170	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS35175	SM00387	Histidine kinase-like ATPases
RLV_RS35175	SM00433	TopoisomeraseII
RLV_RS35265	SM00091	PAS domain
RLV_RS35265	SM00387	Histidine kinase-like ATPases
RLV_RS35265	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS35270	SM00996	S-adenosyl-L-homocysteine hydrolase
RLV_RS35270	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
RLV_RS35290	SM00387	Histidine kinase-like ATPases
RLV_RS35290	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS35295	SM00448	cheY-homologous receiver domain
RLV_RS35295	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS35370	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35370	SM01086	C-terminal, D2-small domain, of ClpB protein
RLV_RS35400	SM00448	cheY-homologous receiver domain
RLV_RS35405	SM00387	Histidine kinase-like ATPases
RLV_RS35405	SM00388	His Kinase A (phosphoacceptor) domain
RLV_RS35410	SM00487	DEAD-like helicases superfamily
RLV_RS35410	SM00490	helicase superfamily c-terminal domain
RLV_RS35410	SM00847	Helicase associated domain (HA2)  Add an annotation
RLV_RS35465	SM00028	Tetratricopeptide repeats
RLV_RS35480	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35500	SM00421	helix_turn_helix, Lux Regulon
RLV_RS35540	SM00354	helix_turn _helix lactose operon repressor
RLV_RS35600	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35650	SM00422	helix_turn_helix, mercury resistance
RLV_RS35650	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS35655	SM00474	3'-5' exonuclease
RLV_RS35665	SM00316	Ribosomal protein S1-like RNA-binding domain
RLV_RS35735	SM00825	Beta-ketoacyl synthase
RLV_RS35750	SM00316	Ribosomal protein S1-like RNA-binding domain
RLV_RS35750	SM00322	K homology RNA-binding domain
RLV_RS35755	SM01387	RLV_RS35755
RLV_RS35785	SM00316	Ribosomal protein S1-like RNA-binding domain
RLV_RS35785	SM00322	K homology RNA-binding domain
RLV_RS35810	SM00493	RLV_RS35810
RLV_RS35825	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35885	SM00287	Bacterial SH3 domain homologues
RLV_RS35905	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35910	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS35920	SM00271	DnaJ molecular chaperone homology domain
RLV_RS35940	SM00287	Bacterial SH3 domain homologues
RLV_RS35950	SM00052	Putative diguanylate phosphodiesterase
RLV_RS35950	SM00267	diguanylate cyclase
RLV_RS35960	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS35970	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
RLV_RS35970	SM00474	3'-5' exonuclease
RLV_RS35970	SM00475	5'-3' exonuclease
RLV_RS35970	SM00479	RLV_RS35970
RLV_RS35970	SM00482	DNA polymerase A domain
RLV_RS35975	SM00382	ATPases associated with a variety of cellular activities
RLV_RS35975	SM00843	RLV_RS35975
RLV_RS35985	SM00072	Guanylate kinase homologues.
RLV_RS36015	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36025	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36030	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS36055	SM00866	RLV_RS36055
RLV_RS36060	SM00855	Phosphoglycerate mutase family
RLV_RS36070	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36080	SM00851	MGS-like domain
RLV_RS36105	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36140	SM00344	helix_turn_helix ASNC type
RLV_RS36160	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36185	SM01133	RLV_RS36185
RLV_RS36190	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
RLV_RS36240	SM00858	RLV_RS36240
RLV_RS36290	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS36395	SM01266	RLV_RS36395
RLV_RS36425	SM00530	Helix-turn-helix XRE-family like proteins 
RLV_RS36495	SM00873	B3/4 domain
RLV_RS36495	SM00874	tRNA synthetase B5 domain
RLV_RS36495	SM00896	Ferredoxin-fold anticodon binding domain
RLV_RS36580	SM00347	helix_turn_helix multiple antibiotic resistance protein
RLV_RS36635	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS36650	SM00342	helix_turn_helix, arabinose operon control protein
RLV_RS36650	SM00871	Bacterial transcription activator, effector binding domain
RLV_RS36665	SM00822	RLV_RS36665
RLV_RS36755	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
RLV_RS36775	SM00480	DNA polymerase III beta subunit
RLV_RS36795	SM00354	helix_turn _helix lactose operon repressor
RLV_RS36805	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36820	SM00382	ATPases associated with a variety of cellular activities
RLV_RS36850	SM00344	helix_turn_helix ASNC type
RLV_RS36890	SM00344	helix_turn_helix ASNC type
RLV_RS36910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
RLV_RS36910	SM00895	RLV_RS36910
RLV_RS36925	SM00822	RLV_RS36925
RLV_RS36995	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
RLV_RS36995	SM01232	RLV_RS36995
RLV_RS37015	SM00470	ParB-like nuclease domain
RLV_RS37035	SM00470	ParB-like nuclease domain
RLV_RS37090	SM00448	cheY-homologous receiver domain
RLV_RS37090	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS37095	SM00387	Histidine kinase-like ATPases
RLV_RS37195	SM00382	ATPases associated with a variety of cellular activities
RLV_RS37460	SM00448	cheY-homologous receiver domain
RLV_RS37460	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS37555	SM00448	cheY-homologous receiver domain
RLV_RS37555	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS37770	SM00857	Resolvase, N terminal domain
RLV_RS37910	SM00448	cheY-homologous receiver domain
RLV_RS37910	SM00862	Transcriptional regulatory protein, C terminal
RLV_RS37995	SM00448	cheY-homologous receiver domain
RLV_RS37995	SM00862	Transcriptional regulatory protein, C terminal
