locus-tag	class	description
AMC82_RS00005	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AMC82_RS00010	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AMC82_RS00015	COG0424	maF-like protein
AMC82_RS00020	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AMC82_RS00025	COG0237	dephospho-CoA kinase activity
AMC82_RS00030	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMC82_RS00035	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AMC82_RS00050	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AMC82_RS00070	COG2801	Transposase and inactivated derivatives
AMC82_RS00075	COG2963	transposase activity
AMC82_RS00090	COG0435	Glutathione S-transferase
AMC82_RS00115	COG0135	phosphoribosylanthranilate isomerase activity
AMC82_RS00120	COG0133	tryptophan synthase activity
AMC82_RS00125	COG0159	tryptophan synthase activity
AMC82_RS00130	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AMC82_RS00135	COG0285	dihydrofolate synthase activity
AMC82_RS00145	COG1074	ATP-dependent DNA helicase activity
AMC82_RS00150	COG2887	Belongs to the helicase family. UvrD subfamily
AMC82_RS00155	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AMC82_RS00160	COG3178	'Phosphotransferase
AMC82_RS00165	COG2205	protein histidine kinase activity
AMC82_RS00170	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMC82_RS00175	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMC82_RS00180	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AMC82_RS00180	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMC82_RS00190	COG0642	Histidine kinase
AMC82_RS00195	COG0745	RESPONSE REGULATOR receiver
AMC82_RS00200	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AMC82_RS00215	COG1072	(Pantothenic acid kinase))
AMC82_RS00220	COG0140	phosphoribosyl-ATP diphosphatase activity
AMC82_RS00225	COG0107	imidazoleglycerol-phosphate synthase activity
AMC82_RS00230	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AMC82_RS00245	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AMC82_RS00255	COG0131	Imidazoleglycerol-phosphate dehydratase
AMC82_RS00260	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMC82_RS00265	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AMC82_RS00275	COG2124	cytochrome p450
AMC82_RS00280	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AMC82_RS00295	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
AMC82_RS00305	COG1643	Atp-dependent helicase
AMC82_RS00310	COG2423	ornithine cyclodeaminase activity
AMC82_RS00350	COG2197	response regulator
AMC82_RS00360	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS00365	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AMC82_RS00370	COG1215	transferase activity, transferring glycosyl groups
AMC82_RS00390	COG1609	Transcriptional regulator
AMC82_RS00400	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMC82_RS00405	COG0673	inositol 2-dehydrogenase activity
AMC82_RS00420	COG0673	inositol 2-dehydrogenase activity
AMC82_RS00425	COG1309	transcriptional regulator
AMC82_RS00435	COG1175	transmembrane transport
AMC82_RS00440	COG0395	ABC-type sugar transport system, permease component
AMC82_RS00450	COG3842	ATPase activity
AMC82_RS00465	COG0246	Mannitol dehydrogenase
AMC82_RS00470	COG1904	glucuronate isomerase
AMC82_RS00475	COG2900	Belongs to the SlyX family
AMC82_RS00485	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS00490	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AMC82_RS00500	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS00510	COG0539	negative regulation of cytoplasmic translation
AMC82_RS00515	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AMC82_RS00545	COG2954	triphosphatase activity
AMC82_RS00570	COG1566	PFAM secretion protein HlyD family protein
AMC82_RS00585	COG0628	permease
AMC82_RS00610	COG0531	amino acid
AMC82_RS00615	COG1982	Orn Lys Arg decarboxylase major
AMC82_RS00635	COG0531	amino acid
AMC82_RS00660	COG4191	Histidine kinase
AMC82_RS00690	COG0668	transmembrane transport
AMC82_RS00730	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMC82_RS00740	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AMC82_RS00750	COG1185	polyribonucleotide nucleotidyltransferase activity
AMC82_RS00755	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMC82_RS00765	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMC82_RS00770	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMC82_RS00775	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMC82_RS00790	COG0779	Required for maturation of 30S ribosomal subunits
AMC82_RS00795	COG2814	Major facilitator Superfamily
AMC82_RS00810	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMC82_RS00815	COG2258	MOSC domain
AMC82_RS00820	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMC82_RS00825	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMC82_RS00840	COG2816	NAD+ diphosphatase activity
AMC82_RS00845	COG2378	regulation of single-species biofilm formation
AMC82_RS00860	COG1605	Chorismate mutase
AMC82_RS00860	COG0077	Prephenate dehydratase
AMC82_RS00865	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AMC82_RS00870	COG3474	cytochrome
AMC82_RS00875	COG0679	Auxin Efflux Carrier
AMC82_RS00880	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMC82_RS00905	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMC82_RS00910	COG1396	sequence-specific DNA binding
AMC82_RS00920	COG0484	heat shock protein binding
AMC82_RS00925	COG0443	Heat shock 70 kDa protein
AMC82_RS00930	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMC82_RS00945	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMC82_RS00950	COG3300	MHYT domain
AMC82_RS00950	COG5001	Diguanylate cyclase
AMC82_RS00960	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS00960	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS00965	COG1674	ftsk spoiiie
AMC82_RS00970	COG1177	transmembrane transport
AMC82_RS00975	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMC82_RS00980	COG3842	ATPase activity
AMC82_RS00990	COG0583	DNA-binding transcription factor activity
AMC82_RS00995	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMC82_RS00995	COG0456	acetyltransferase
AMC82_RS01000	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AMC82_RS01005	COG3454	Phosphonate metabolism
AMC82_RS01010	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AMC82_RS01015	COG3639	organic phosphonate transmembrane transporter activity
AMC82_RS01020	COG3639	organic phosphonate transmembrane transporter activity
AMC82_RS01030	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AMC82_RS01040	COG4778	phosphonate C-P lyase system protein PhnL
AMC82_RS01045	COG4107	phosphonate C-P lyase system protein PhnK
AMC82_RS01050	COG3627	carbon phosphorus lyase activity
AMC82_RS01055	COG3626	phosphonate metabolism
AMC82_RS01060	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AMC82_RS01065	COG3624	Phosphonate C-P lyase system protein PhnG
AMC82_RS01070	COG2188	Transcriptional regulator
AMC82_RS01075	COG0588	phosphoglycerate mutase activity
AMC82_RS01080	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AMC82_RS01085	COG1132	(ABC) transporter
AMC82_RS01090	COG0837	glucose binding
AMC82_RS01095	COG1803	Methylglyoxal synthase
AMC82_RS01100	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
AMC82_RS01105	COG4166	transmembrane transport
AMC82_RS01110	COG4174	ABC transporter (Permease)
AMC82_RS01115	COG4239	(ABC) transporter, permease
AMC82_RS01120	COG4172	Belongs to the ABC transporter superfamily
AMC82_RS01125	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMC82_RS01135	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMC82_RS01165	COG1744	ABC transporter substrate-binding protein PnrA-like
AMC82_RS01170	COG3845	ABC transporter
AMC82_RS01175	COG1079	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS01180	COG1079	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS01190	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AMC82_RS01195	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMC82_RS01200	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AMC82_RS01210	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMC82_RS01215	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMC82_RS01220	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AMC82_RS01255	COG4964	Belongs to the GSP D family
AMC82_RS01285	COG1280	lysine exporter protein (LysE YggA)
AMC82_RS01295	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMC82_RS01310	COG0154	amidase activity
AMC82_RS01315	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMC82_RS01325	COG0747	negative chemotaxis
AMC82_RS01340	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMC82_RS01350	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMC82_RS01360	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
AMC82_RS01420	COG0481	GTPase activity
AMC82_RS01425	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AMC82_RS01430	COG1396	sequence-specific DNA binding
AMC82_RS01450	COG2137	regulation of response to DNA damage stimulus
AMC82_RS01480	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMC82_RS01485	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AMC82_RS01490	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMC82_RS01495	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMC82_RS01500	COG0072	phenylalanine-tRNA ligase activity
AMC82_RS01500	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMC82_RS01510	COG0667	Aldo Keto reductase
AMC82_RS01520	COG3685	Protein conserved in bacteria
AMC82_RS01535	COG0656	L-ascorbic acid biosynthetic process
AMC82_RS01540	COG2826	transposase and inactivated derivatives, IS30 family
AMC82_RS01575	COG1570	exodeoxyribonuclease VII activity
AMC82_RS01580	COG2249	NAD(P)H dehydrogenase (quinone) activity
AMC82_RS01585	COG1846	Transcriptional regulator
AMC82_RS01590	COG0697	spore germination
AMC82_RS01595	COG2309	aminopeptidase activity
AMC82_RS01600	COG0625	glutathione transferase activity
AMC82_RS01605	COG1846	Transcriptional regulator
AMC82_RS01615	COG1393	Belongs to the ArsC family
AMC82_RS01630	COG4221	oxidoreductase activity
AMC82_RS01640	COG0583	DNA-binding transcription factor activity
AMC82_RS01645	COG2207	Transcriptional regulator
AMC82_RS01650	COG1881	PFAM PEBP family protein
AMC82_RS01660	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMC82_RS01670	COG0519	Catalyzes the synthesis of GMP from XMP
AMC82_RS01670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AMC82_RS01715	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMC82_RS01725	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AMC82_RS01735	COG1968	undecaprenyl-diphosphatase activity
AMC82_RS01750	COG0284	orotidine-5'-phosphate decarboxylase activity
AMC82_RS01760	COG3963	phosphatidate phosphatase activity
AMC82_RS01775	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMC82_RS01780	COG0792	nuclease activity
AMC82_RS01790	COG0189	ligase activity
AMC82_RS01805	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMC82_RS01815	COG0697	spore germination
AMC82_RS01820	COG1522	sequence-specific DNA binding
AMC82_RS01830	COG0756	dUTP diphosphatase activity
AMC82_RS01835	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMC82_RS01865	COG2807	transmembrane transport
AMC82_RS01880	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMC82_RS01890	COG0583	DNA-binding transcription factor activity
AMC82_RS01895	COG2814	Major facilitator Superfamily
AMC82_RS01910	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AMC82_RS01930	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AMC82_RS01935	COG2986	histidine ammonia-lyase
AMC82_RS01940	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMC82_RS01945	COG2226	methyltransferase
AMC82_RS01950	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AMC82_RS01955	COG1024	Enoyl-CoA hydratase
AMC82_RS01960	COG0268	Binds directly to 16S ribosomal RNA
AMC82_RS01965	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMC82_RS01975	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AMC82_RS01980	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMC82_RS01990	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AMC82_RS01995	COG1420	regulation of RNA biosynthetic process
AMC82_RS02000	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMC82_RS02005	COG1957	nucleoside hydrolase
AMC82_RS02010	COG0071	Belongs to the small heat shock protein (HSP20) family
AMC82_RS02020	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AMC82_RS02025	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMC82_RS02030	COG1396	sequence-specific DNA binding
AMC82_RS02035	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AMC82_RS02040	COG1253	flavin adenine dinucleotide binding
AMC82_RS02045	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMC82_RS02050	COG1702	phosphate starvation-inducible protein PhoH
AMC82_RS02055	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMC82_RS02080	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AMC82_RS02090	COG0180	Tryptophanyl-tRNA synthetase
AMC82_RS02120	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMC82_RS02125	COG0280	phosphate acetyltransferase
AMC82_RS02125	COG0281	malic enzyme
AMC82_RS02145	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMC82_RS02150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMC82_RS02155	COG0116	Belongs to the methyltransferase superfamily
AMC82_RS02155	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AMC82_RS02175	COG0776	regulation of translation
AMC82_RS02190	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AMC82_RS02195	COG1137	ATPase activity
AMC82_RS02205	COG0697	spore germination
AMC82_RS02210	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMC82_RS02215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMC82_RS02220	COG0840	transmembrane signaling receptor activity
AMC82_RS02225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMC82_RS02235	COG0840	transmembrane signaling receptor activity
AMC82_RS02240	COG0242	peptide deformylase activity
AMC82_RS02255	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMC82_RS02260	COG0101	tRNA pseudouridine synthase activity
AMC82_RS02270	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AMC82_RS02275	COG2171	N-acyltransferase activity
AMC82_RS02295	COG1032	radical SAM domain protein
AMC82_RS02300	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AMC82_RS02300	COG2169	Transcriptional regulator
AMC82_RS02310	COG1304	FMN binding
AMC82_RS02315	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AMC82_RS02320	COG5484	DNA packaging
AMC82_RS02330	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
AMC82_RS02335	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AMC82_RS02340	COG0706	membrane insertase activity
AMC82_RS02345	COG0594	ribonuclease P activity
AMC82_RS02350	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AMC82_RS02400	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AMC82_RS02405	COG0667	Aldo Keto reductase
AMC82_RS02415	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS02420	COG3938	Belongs to the proline racemase family
AMC82_RS02440	COG1309	transcriptional regulator
AMC82_RS02460	COG5001	Diguanylate cyclase
AMC82_RS02460	COG3300	MHYT domain
AMC82_RS02465	COG0604	alcohol dehydrogenase
AMC82_RS02475	COG3546	catalase activity
AMC82_RS02505	COG1072	(Pantothenic acid kinase))
AMC82_RS02510	COG0418	dihydroorotase activity
AMC82_RS02530	COG1309	transcriptional regulator
AMC82_RS02535	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMC82_RS02545	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AMC82_RS02550	COG0166	Belongs to the GPI family
AMC82_RS02555	COG0318	PFAM AMP-dependent synthetase and ligase
AMC82_RS02575	COG1174	glycine betaine transport
AMC82_RS02580	COG1125	glycine betaine transport
AMC82_RS02585	COG1174	glycine betaine transport
AMC82_RS02590	COG1732	Glycine betaine
AMC82_RS02595	COG0583	DNA-binding transcription factor activity
AMC82_RS02600	COG3142	Participates in the control of copper homeostasis
AMC82_RS02605	COG1063	alcohol dehydrogenase
AMC82_RS02610	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS02635	COG2721	sulfolactate sulfo-lyase activity
AMC82_RS02655	COG4178	(ABC) transporter
AMC82_RS02660	COG2814	Major facilitator Superfamily
AMC82_RS02690	COG2326	polyphosphate kinase activity
AMC82_RS02695	COG5002	protein histidine kinase activity
AMC82_RS02700	COG2852	Protein conserved in bacteria
AMC82_RS02705	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AMC82_RS02710	COG0573	inorganic phosphate transmembrane transporter activity
AMC82_RS02720	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AMC82_RS02725	COG0704	Plays a role in the regulation of phosphate uptake
AMC82_RS02730	COG0745	RESPONSE REGULATOR receiver
AMC82_RS02740	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMC82_RS02745	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMC82_RS02760	COG2967	ApaG domain
AMC82_RS02770	COG0717	Belongs to the dCTP deaminase family
AMC82_RS02790	COG0840	transmembrane signaling receptor activity
AMC82_RS02795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMC82_RS02830	COG0167	dihydroorotate dehydrogenase activity
AMC82_RS02835	COG0534	Mate efflux family protein
AMC82_RS02860	COG2801	Transposase and inactivated derivatives
AMC82_RS02860	COG3415	Transposase
AMC82_RS02865	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AMC82_RS02870	COG1959	2 iron, 2 sulfur cluster binding
AMC82_RS02880	COG1201	RNA secondary structure unwinding
AMC82_RS02905	COG0730	response to heat
AMC82_RS02925	COG1960	acyl-CoA dehydrogenase activity
AMC82_RS02930	COG0183	Belongs to the thiolase family
AMC82_RS02935	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMC82_RS02935	COG1024	Enoyl-CoA hydratase
AMC82_RS02940	COG1278	Cold shock
AMC82_RS02970	COG0784	Response regulator, receiver
AMC82_RS02970	COG2198	Histidine kinase
AMC82_RS02970	COG2205	protein histidine kinase activity
AMC82_RS02975	COG1970	mechanosensitive ion channel activity
AMC82_RS02980	COG0436	Aminotransferase
AMC82_RS02990	COG5001	Diguanylate cyclase
AMC82_RS03000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMC82_RS03045	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMC82_RS03055	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AMC82_RS03060	COG5328	Belongs to the UPF0262 family
AMC82_RS03065	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMC82_RS03070	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMC82_RS03075	COG0424	maF-like protein
AMC82_RS03080	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AMC82_RS03140	COG0583	DNA-binding transcription factor activity
AMC82_RS03165	COG0251	oxidation-reduction process
AMC82_RS03170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS03180	COG0444	Belongs to the ABC transporter superfamily
AMC82_RS03185	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS03205	COG2186	Transcriptional regulator
AMC82_RS03210	COG1609	Transcriptional regulator
AMC82_RS03225	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS03235	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AMC82_RS03245	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AMC82_RS03275	COG0346	lactoylglutathione lyase activity
AMC82_RS03280	COG4251	negative regulation of phosphorylation
AMC82_RS03290	COG4251	negative regulation of phosphorylation
AMC82_RS03300	COG2197	response regulator
AMC82_RS03325	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMC82_RS03325	COG4651	solute:proton antiporter activity
AMC82_RS03335	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMC82_RS03340	COG0840	transmembrane signaling receptor activity
AMC82_RS03350	COG0745	RESPONSE REGULATOR receiver
AMC82_RS03355	COG0643	Histidine kinase
AMC82_RS03355	COG2198	Histidine kinase
AMC82_RS03360	COG0835	chemotaxis
AMC82_RS03365	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMC82_RS03370	COG2201	protein-glutamate methylesterase activity
AMC82_RS03375	COG0745	RESPONSE REGULATOR receiver
AMC82_RS03380	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMC82_RS03390	COG1766	The M ring may be actively involved in energy transduction
AMC82_RS03395	COG2771	luxR family
AMC82_RS03410	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMC82_RS03415	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMC82_RS03420	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMC82_RS03425	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMC82_RS03430	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AMC82_RS03435	COG4786	Flagellar basal body rod
AMC82_RS03440	COG1157	protein secretion by the type III secretion system
AMC82_RS03450	COG1815	bacterial-type flagellum-dependent cell motility
AMC82_RS03455	COG1558	bacterial-type flagellum-dependent cell motility
AMC82_RS03460	COG1677	Flagellar hook-basal body complex protein FliE
AMC82_RS03465	COG4786	Flagellar basal body rod
AMC82_RS03470	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
AMC82_RS03475	COG1706	bacterial-type flagellum-dependent cell motility
AMC82_RS03485	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
AMC82_RS03495	COG1338	Plays a role in the flagellum-specific transport system
AMC82_RS03515	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMC82_RS03520	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMC82_RS03530	COG1360	Flagellar Motor Protein
AMC82_RS03555	COG1749	Flagellar hook protein flgE
AMC82_RS03575	COG5443	negative regulation of bacterial-type flagellum assembly
AMC82_RS03585	COG4794	Type iii secretion
AMC82_RS03590	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMC82_RS03595	COG1684	flagellar biosynthetic protein fliR
AMC82_RS03620	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
AMC82_RS03630	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMC82_RS03635	COG1609	Transcriptional regulator
AMC82_RS03640	COG1653	transport
AMC82_RS03645	COG1175	transmembrane transport
AMC82_RS03650	COG0395	ABC-type sugar transport system, permease component
AMC82_RS03655	COG0366	Alpha amylase catalytic
AMC82_RS03660	COG3842	ATPase activity
AMC82_RS03680	COG0129	dihydroxy-acid dehydratase activity
AMC82_RS03685	COG0363	glucosamine-6-phosphate deaminase activity
AMC82_RS03690	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMC82_RS03695	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS03705	COG2081	HI0933 family
AMC82_RS03715	COG2972	Histidine kinase
AMC82_RS03715	COG0840	transmembrane signaling receptor activity
AMC82_RS03720	COG0840	transmembrane signaling receptor activity
AMC82_RS03740	COG2224	Isocitrate lyase
AMC82_RS03750	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AMC82_RS03755	COG3842	ATPase activity
AMC82_RS03760	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMC82_RS03765	COG1177	transmembrane transport
AMC82_RS03775	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMC82_RS03780	COG2205	protein histidine kinase activity
AMC82_RS03820	COG1959	2 iron, 2 sulfur cluster binding
AMC82_RS03825	COG0747	negative chemotaxis
AMC82_RS03830	COG0601	transmembrane transport
AMC82_RS03835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMC82_RS03840	COG0444	Belongs to the ABC transporter superfamily
AMC82_RS03845	COG4608	Belongs to the ABC transporter superfamily
AMC82_RS03850	COG3265	gluconokinase activity
AMC82_RS03855	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS03860	COG1755	Isoprenylcysteine carboxyl methyltransferase
AMC82_RS03890	COG0463	Glycosyl transferase, family 2
AMC82_RS03900	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AMC82_RS03915	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
AMC82_RS03920	COG2089	acid synthase
AMC82_RS03925	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMC82_RS03935	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AMC82_RS03940	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS03960	COG2226	methyltransferase
AMC82_RS03965	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMC82_RS03990	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS04000	COG0248	Ppx GppA phosphatase
AMC82_RS04005	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AMC82_RS04015	COG0477	Major facilitator Superfamily
AMC82_RS04035	COG0583	DNA-binding transcription factor activity
AMC82_RS04040	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS04055	COG0583	DNA-binding transcription factor activity
AMC82_RS04080	COG0306	phosphate transporter
AMC82_RS04090	COG0583	DNA-binding transcription factor activity
AMC82_RS04095	COG0277	FAD linked oxidase domain protein
AMC82_RS04100	COG0277	FAD linked oxidase domain protein
AMC82_RS04105	COG0247	lactate metabolic process
AMC82_RS04120	COG1388	LysM domain
AMC82_RS04120	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS04125	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS04130	COG2818	Glycosylase
AMC82_RS04145	COG0667	Aldo Keto reductase
AMC82_RS04165	COG0124	histidyl-tRNA synthetase
AMC82_RS04170	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AMC82_RS04175	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AMC82_RS04180	COG2259	Doxx family
AMC82_RS04185	COG0625	glutathione transferase activity
AMC82_RS04195	COG0459	protein refolding
AMC82_RS04200	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMC82_RS04210	COG0196	riboflavin kinase activity
AMC82_RS04235	COG0590	tRNA wobble adenosine to inosine editing
AMC82_RS04240	COG1187	pseudouridine synthase activity
AMC82_RS04245	COG0742	ribosomal rna small subunit methyltransferase
AMC82_RS04270	COG0312	modulator of DNA gyrase
AMC82_RS04285	COG1519	Transferase
AMC82_RS04295	COG1663	tetraacyldisaccharide 4'-kinase activity
AMC82_RS04310	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AMC82_RS04315	COG0745	RESPONSE REGULATOR receiver
AMC82_RS04320	COG3300	MHYT domain
AMC82_RS04320	COG5001	Diguanylate cyclase
AMC82_RS04330	COG3386	PFAM SMP-30 Gluconolaconase
AMC82_RS04335	COG0800	Aldolase
AMC82_RS04340	COG3734	2-keto-3-deoxy-galactonokinase
AMC82_RS04345	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS04350	COG1414	Transcriptional regulator
AMC82_RS04355	COG2197	response regulator
AMC82_RS04360	COG0489	protein tyrosine kinase activity
AMC82_RS04365	COG0598	Magnesium transport protein CorA
AMC82_RS04370	COG3158	transport of potassium into the cell
AMC82_RS04385	COG0356	it plays a direct role in the translocation of protons across the membrane
AMC82_RS04395	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMC82_RS04400	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMC82_RS04405	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMC82_RS04425	COG0521	Mo-molybdopterin cofactor biosynthetic process
AMC82_RS04430	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMC82_RS04440	COG0142	geranyltranstransferase activity
AMC82_RS04455	COG1914	H( )-stimulated, divalent metal cation uptake system
AMC82_RS04470	COG0752	glycyl-tRNA synthetase alpha subunit
AMC82_RS04475	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AMC82_RS04485	COG1704	LemA family
AMC82_RS04490	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AMC82_RS04500	COG0151	Belongs to the GarS family
AMC82_RS04510	COG1683	Conserved Protein
AMC82_RS04515	COG0751	glycine-tRNA ligase activity
AMC82_RS04520	COG2183	response to ionizing radiation
AMC82_RS04525	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AMC82_RS04560	COG0009	L-threonylcarbamoyladenylate synthase
AMC82_RS04570	COG4638	Rieske (2fe-2S)
AMC82_RS04590	COG1960	acyl-CoA dehydrogenase activity
AMC82_RS04605	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS04610	COG1733	regulation of RNA biosynthetic process
AMC82_RS04615	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMC82_RS04625	COG0840	transmembrane signaling receptor activity
AMC82_RS04630	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMC82_RS04640	COG1741	Belongs to the pirin family
AMC82_RS04650	COG1722	exodeoxyribonuclease VII activity
AMC82_RS04655	COG0123	including yeast histone deacetylase and acetoin utilization protein
AMC82_RS04665	COG1802	Transcriptional regulator
AMC82_RS04675	COG0318	PFAM AMP-dependent synthetase and ligase
AMC82_RS04690	COG0642	Histidine kinase
AMC82_RS04715	COG0662	Cupin 2, conserved barrel domain protein
AMC82_RS04720	COG0583	DNA-binding transcription factor activity
AMC82_RS04730	COG1268	BioY protein
AMC82_RS04735	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMC82_RS04740	COG1122	ATPase activity
AMC82_RS04745	COG3214	Protein conserved in bacteria
AMC82_RS04750	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMC82_RS04750	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMC82_RS04755	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AMC82_RS04775	COG0406	alpha-ribazole phosphatase activity
AMC82_RS04780	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AMC82_RS04785	COG0484	heat shock protein binding
AMC82_RS04795	COG0259	pyridoxamine-phosphate oxidase activity
AMC82_RS04805	COG1686	Belongs to the peptidase S11 family
AMC82_RS04815	COG0306	phosphate transporter
AMC82_RS04820	COG1392	Phosphate transport regulator
AMC82_RS04830	COG0312	modulator of DNA gyrase
AMC82_RS04840	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMC82_RS04840	COG1565	acr, cog1565
AMC82_RS04845	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMC82_RS04850	COG0109	protoheme IX farnesyltransferase activity
AMC82_RS04855	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
AMC82_RS04880	COG3346	SURF1 family
AMC82_RS04885	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AMC82_RS04890	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AMC82_RS04895	COG0328	RNA-DNA hybrid ribonuclease activity
AMC82_RS04915	COG1678	Uncharacterized ACR, COG1678
AMC82_RS04925	COG0678	peroxiredoxin activity
AMC82_RS04925	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AMC82_RS04930	COG1121	(ABC) transporter
AMC82_RS04935	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AMC82_RS04940	COG0803	Belongs to the bacterial solute-binding protein 9 family
AMC82_RS04960	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMC82_RS04965	COG0612	Peptidase, M16
AMC82_RS04985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMC82_RS05020	COG2189	Belongs to the N(4) N(6)-methyltransferase family
AMC82_RS05035	COG1194	a g-specific adenine glycosylase
AMC82_RS05070	COG1196	nuclear chromosome segregation
AMC82_RS05100	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMC82_RS05100	COG0574	Belongs to the PEP-utilizing enzyme family
AMC82_RS05160	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AMC82_RS05165	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
AMC82_RS05170	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS05190	COG0204	Acyl-transferase
AMC82_RS05190	COG0318	PFAM AMP-dependent synthetase and ligase
AMC82_RS05200	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMC82_RS05270	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AMC82_RS05275	COG0210	DNA helicase
AMC82_RS05335	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMC82_RS05405	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMC82_RS05515	COG0471	metal ion transport
AMC82_RS05515	COG3273	potassium ion transport
AMC82_RS05525	COG0659	secondary active sulfate transmembrane transporter activity
AMC82_RS05665	COG0640	Transcriptional regulator
AMC82_RS05670	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS05675	COG2329	Antibiotic biosynthesis monooxygenase
AMC82_RS05705	COG1073	alpha beta
AMC82_RS05835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMC82_RS05840	COG1609	Transcriptional regulator
AMC82_RS05845	COG0583	DNA-binding transcription factor activity
AMC82_RS05880	COG0583	DNA-binding transcription factor activity
AMC82_RS05885	COG2223	nitrite transmembrane transporter activity
AMC82_RS05890	COG0583	DNA-binding transcription factor activity
AMC82_RS05910	COG2895	sulfate adenylyltransferase (ATP) activity
AMC82_RS05915	COG0175	sulfate reduction
AMC82_RS05920	COG0175	sulfate reduction
AMC82_RS05925	COG1959	2 iron, 2 sulfur cluster binding
AMC82_RS05950	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
AMC82_RS05955	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS05960	COG1309	transcriptional regulator
AMC82_RS05975	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AMC82_RS05985	COG2226	methyltransferase
AMC82_RS06010	COG1349	DNA-binding transcription factor activity
AMC82_RS06045	COG0583	DNA-binding transcription factor activity
AMC82_RS06050	COG0435	Glutathione S-transferase
AMC82_RS06060	COG1881	PFAM PEBP family protein
AMC82_RS06090	COG0596	Alpha beta hydrolase
AMC82_RS06100	COG1793	dna ligase
AMC82_RS06120	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS06125	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS06130	COG1278	Cold shock
AMC82_RS06140	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AMC82_RS06150	COG1846	Transcriptional regulator
AMC82_RS06155	COG1764	response to oxidative stress
AMC82_RS06160	COG1846	Transcriptional regulator
AMC82_RS06180	COG0488	(ABC) transporter
AMC82_RS06185	COG0488	(ABC) transporter
AMC82_RS06195	COG0433	COG0433 Predicted ATPase
AMC82_RS06205	COG1051	belongs to the nudix hydrolase family
AMC82_RS06215	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMC82_RS06220	COG4106	trans-aconitate 2-methyltransferase activity
AMC82_RS06225	COG1253	flavin adenine dinucleotide binding
AMC82_RS06235	COG1335	isochorismatase
AMC82_RS06245	COG1064	alcohol dehydrogenase
AMC82_RS06250	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMC82_RS06260	COG0583	DNA-binding transcription factor activity
AMC82_RS06285	COG0625	glutathione transferase activity
AMC82_RS06295	COG2814	Major facilitator Superfamily
AMC82_RS06305	COG0730	response to heat
AMC82_RS06320	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AMC82_RS06335	COG1280	lysine exporter protein (LysE YggA)
AMC82_RS06345	COG2910	NAD(P)H-binding
AMC82_RS06355	COG0583	DNA-binding transcription factor activity
AMC82_RS06365	COG2010	Cytochrome c
AMC82_RS06390	COG4993	Dehydrogenase
AMC82_RS06395	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
AMC82_RS06400	COG0477	Major facilitator Superfamily
AMC82_RS06425	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS06440	COG2514	catechol 2,3-dioxygenase activity
AMC82_RS06450	COG1272	protein, Hemolysin III
AMC82_RS06455	COG1247	-acetyltransferase
AMC82_RS06465	COG5425	PFAM Usg family protein
AMC82_RS06470	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMC82_RS06475	COG0459	protein refolding
AMC82_RS06485	COG0438	transferase activity, transferring glycosyl groups
AMC82_RS06500	COG0071	Belongs to the small heat shock protein (HSP20) family
AMC82_RS06505	COG0071	Belongs to the small heat shock protein (HSP20) family
AMC82_RS06515	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMC82_RS06525	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AMC82_RS06525	COG2111	Na H antiporter
AMC82_RS06530	COG2111	Na H antiporter
AMC82_RS06535	COG1006	Multisubunit Na H antiporter MnhC subunit
AMC82_RS06545	COG0651	ATP synthesis coupled electron transport
AMC82_RS06550	COG1863	multisubunit Na H antiporter MnhE subunit
AMC82_RS06555	COG2212	antiporter activity
AMC82_RS06560	COG1320	monovalent cation:proton antiporter activity
AMC82_RS06565	COG4957	zinc ion binding
AMC82_RS06570	COG2166	iron-sulfur cluster assembly
AMC82_RS06580	COG2205	protein histidine kinase activity
AMC82_RS06615	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMC82_RS06620	COG2983	Belongs to the UPF0260 family
AMC82_RS06630	COG4221	oxidoreductase activity
AMC82_RS06635	COG3239	Fatty acid desaturase
AMC82_RS06660	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMC82_RS06675	COG0625	glutathione transferase activity
AMC82_RS06690	COG1309	transcriptional regulator
AMC82_RS06730	COG4235	cytochrome complex assembly
AMC82_RS06735	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AMC82_RS06740	COG1138	Cytochrome C-type biogenesis protein
AMC82_RS06745	COG3088	subunit of a heme lyase
AMC82_RS06750	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMC82_RS06755	COG0745	RESPONSE REGULATOR receiver
AMC82_RS06760	COG2205	protein histidine kinase activity
AMC82_RS06765	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AMC82_RS06770	COG2202	Pas domain
AMC82_RS06770	COG2205	protein histidine kinase activity
AMC82_RS06775	COG0308	aminopeptidase N
AMC82_RS06800	COG0443	Heat shock 70 kDa protein
AMC82_RS06830	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS06845	COG2239	Acts as a magnesium transporter
AMC82_RS06850	COG2814	Major facilitator Superfamily
AMC82_RS06860	COG0174	glutamine synthetase
AMC82_RS06875	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMC82_RS06880	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMC82_RS06885	COG0463	Glycosyl transferase, family 2
AMC82_RS06890	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMC82_RS06900	COG4941	Belongs to the sigma-70 factor family
AMC82_RS06910	COG3795	YCII-related domain
AMC82_RS06915	COG3795	YCII-related domain
AMC82_RS06925	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMC82_RS06945	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMC82_RS06995	COG3718	enzyme involved in inositol metabolism
AMC82_RS07005	COG3962	Belongs to the TPP enzyme family
AMC82_RS07010	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMC82_RS07020	COG0673	inositol 2-dehydrogenase activity
AMC82_RS07050	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS07055	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AMC82_RS07065	COG1758	RNA polymerase activity
AMC82_RS07085	COG0736	holo-[acyl-carrier-protein] synthase activity
AMC82_RS07090	COG0681	Belongs to the peptidase S26 family
AMC82_RS07095	COG0571	ribonuclease III activity
AMC82_RS07100	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMC82_RS07105	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMC82_RS07115	COG1381	Involved in DNA repair and RecF pathway recombination
AMC82_RS07120	COG0656	L-ascorbic acid biosynthetic process
AMC82_RS07130	COG1418	mRNA catabolic process
AMC82_RS07135	COG5001	Diguanylate cyclase
AMC82_RS07135	COG3300	MHYT domain
AMC82_RS07145	COG2032	superoxide dismutase activity
AMC82_RS07150	COG0668	transmembrane transport
AMC82_RS07160	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AMC82_RS07165	COG0354	folic acid binding
AMC82_RS07185	COG1051	belongs to the nudix hydrolase family
AMC82_RS07190	COG1742	UPF0060 membrane protein
AMC82_RS07200	COG1183	phosphatidylcholine synthase activity
AMC82_RS07205	COG0688	phosphatidylethanolamine metabolic process
AMC82_RS07210	COG5265	(ABC) transporter
AMC82_RS07230	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMC82_RS07250	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMC82_RS07275	COG0215	cysteine-tRNA ligase activity
AMC82_RS07285	COG4221	oxidoreductase activity
AMC82_RS07290	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMC82_RS07295	COG1286	toxin biosynthetic process
AMC82_RS07305	COG1280	lysine exporter protein (LysE YggA)
AMC82_RS07310	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMC82_RS07315	COG0305	Participates in initiation and elongation during chromosome replication
AMC82_RS07320	COG0359	binds to the 23S rRNA
AMC82_RS07330	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMC82_RS07335	COG0360	Binds together with S18 to 16S ribosomal RNA
AMC82_RS07340	COG0667	Aldo Keto reductase
AMC82_RS07345	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AMC82_RS07355	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMC82_RS07360	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMC82_RS07365	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AMC82_RS07370	COG1561	YicC-like family, N-terminal region
AMC82_RS07375	COG0194	GDP metabolic process
AMC82_RS07380	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AMC82_RS07385	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AMC82_RS07395	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AMC82_RS07410	COG0671	phosphoesterase, PA-phosphatase related
AMC82_RS07415	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMC82_RS07430	COG1505	serine-type exopeptidase activity
AMC82_RS07435	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMC82_RS07440	COG2079	MmgE PrpD family protein
AMC82_RS07450	COG0765	amino acid transport
AMC82_RS07475	COG0488	(ABC) transporter
AMC82_RS07480	COG3706	GGDEF domain
AMC82_RS07495	COG0105	UTP biosynthetic process
AMC82_RS07515	COG0314	molybdopterin synthase activity
AMC82_RS07525	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMC82_RS07530	COG0322	excinuclease ABC activity
AMC82_RS07535	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS07550	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AMC82_RS07555	COG0243	molybdopterin cofactor binding
AMC82_RS07560	COG0494	nUDIX hydrolase
AMC82_RS07570	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AMC82_RS07575	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AMC82_RS07580	COG0628	permease
AMC82_RS07590	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMC82_RS07595	COG0248	Ppx GppA phosphatase
AMC82_RS07605	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AMC82_RS07610	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AMC82_RS07625	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AMC82_RS07635	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMC82_RS07645	COG3654	unkown
AMC82_RS07660	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
AMC82_RS07670	COG0113	porphobilinogen synthase activity
AMC82_RS07690	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMC82_RS07695	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMC82_RS07700	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMC82_RS07700	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMC82_RS07700	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMC82_RS07700	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMC82_RS07710	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AMC82_RS07715	COG1091	dTDP-4-dehydrorhamnose reductase activity
AMC82_RS07720	COG1088	dTDP-glucose 4,6-dehydratase activity
AMC82_RS07725	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AMC82_RS07785	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AMC82_RS07790	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMC82_RS07795	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AMC82_RS07815	COG0416	fatty acid biosynthetic process
AMC82_RS07820	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMC82_RS07825	COG0776	regulation of translation
AMC82_RS07875	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMC82_RS07885	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMC82_RS07905	COG1940	carbohydrate kinase activity
AMC82_RS07925	COG1175	transmembrane transport
AMC82_RS07930	COG0395	ABC-type sugar transport system, permease component
AMC82_RS07945	COG0297	glycogen (starch) synthase activity
AMC82_RS07970	COG1612	heme a metabolic process
AMC82_RS07980	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AMC82_RS07985	COG0010	Belongs to the arginase family
AMC82_RS07990	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AMC82_RS07995	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMC82_RS08025	COG1832	CoA-binding protein
AMC82_RS08055	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS08075	COG5001	Diguanylate cyclase
AMC82_RS08080	COG2124	cytochrome p450
AMC82_RS08085	COG3706	GGDEF domain
AMC82_RS08090	COG0740	serine-type endopeptidase activity
AMC82_RS08095	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMC82_RS08100	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMC82_RS08105	COG0776	regulation of translation
AMC82_RS08110	COG0697	spore germination
AMC82_RS08120	COG0667	Aldo Keto reductase
AMC82_RS08140	COG0386	Belongs to the glutathione peroxidase family
AMC82_RS08160	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS08165	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS08170	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS08175	COG0649	NAD binding
AMC82_RS08185	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
AMC82_RS08190	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AMC82_RS08195	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AMC82_RS08195	COG3743	rRNA binding
AMC82_RS08205	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AMC82_RS08210	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS08220	COG0713	ATP synthesis coupled electron transport
AMC82_RS08235	COG1007	ATP synthesis coupled electron transport
AMC82_RS08250	COG0346	lactoylglutathione lyase activity
AMC82_RS08260	COG0442	prolyl-tRNA aminoacylation
AMC82_RS08270	COG1136	(ABC) transporter
AMC82_RS08290	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMC82_RS08310	COG0784	Response regulator, receiver
AMC82_RS08320	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AMC82_RS08325	COG0477	Major facilitator Superfamily
AMC82_RS08335	COG0557	exoribonuclease II activity
AMC82_RS08340	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMC82_RS08345	COG0758	DNA mediated transformation
AMC82_RS08350	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AMC82_RS08360	COG0540	Belongs to the ATCase OTCase family
AMC82_RS08365	COG1960	acyl-CoA dehydrogenase activity
AMC82_RS08370	COG1530	ribonuclease E activity
AMC82_RS08375	COG0860	N-Acetylmuramoyl-L-alanine amidase
AMC82_RS08380	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMC82_RS08400	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMC82_RS08425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMC82_RS08440	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMC82_RS08445	COG1086	Polysaccharide biosynthesis protein
AMC82_RS08455	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AMC82_RS08465	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMC82_RS08470	COG0081	regulation of translation
AMC82_RS08475	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMC82_RS08480	COG0222	ribosome binding
AMC82_RS08485	COG0085	RNA polymerase activity
AMC82_RS08490	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMC82_RS08500	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMC82_RS08505	COG0049	tRNA binding
AMC82_RS08510	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMC82_RS08515	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMC82_RS08520	COG0051	transcription antitermination factor activity, RNA binding
AMC82_RS08525	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMC82_RS08530	COG0088	Forms part of the polypeptide exit tunnel
AMC82_RS08535	COG0089	rRNA binding
AMC82_RS08540	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMC82_RS08545	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMC82_RS08550	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMC82_RS08555	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMC82_RS08560	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMC82_RS08565	COG0255	Belongs to the universal ribosomal protein uL29 family
AMC82_RS08570	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMC82_RS08575	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMC82_RS08580	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMC82_RS08585	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMC82_RS08590	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMC82_RS08595	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMC82_RS08600	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMC82_RS08605	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMC82_RS08610	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMC82_RS08615	COG1841	ribosomal large subunit assembly
AMC82_RS08620	COG0200	Binds to the 23S rRNA
AMC82_RS08625	COG0201	protein transport
AMC82_RS08630	COG0563	adenylate kinase activity
AMC82_RS08635	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMC82_RS08640	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMC82_RS08645	COG0202	RNA polymerase activity
AMC82_RS08650	COG0203	ribosomal protein L17
AMC82_RS08665	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AMC82_RS08670	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMC82_RS08675	COG0129	dihydroxy-acid dehydratase activity
AMC82_RS08695	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AMC82_RS08715	COG0583	DNA-binding transcription factor activity
AMC82_RS08735	COG5002	protein histidine kinase activity
AMC82_RS08745	COG1609	Transcriptional regulator
AMC82_RS08755	COG1024	Enoyl-CoA hydratase
AMC82_RS08760	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS08765	COG1653	transport
AMC82_RS08770	COG1175	transmembrane transport
AMC82_RS08775	COG0395	ABC-type sugar transport system, permease component
AMC82_RS08780	COG3842	ATPase activity
AMC82_RS08795	COG0673	inositol 2-dehydrogenase activity
AMC82_RS08800	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AMC82_RS08835	COG2197	response regulator
AMC82_RS08840	COG4585	Histidine kinase
AMC82_RS08845	COG2226	methyltransferase
AMC82_RS08890	COG1522	sequence-specific DNA binding
AMC82_RS08895	COG1522	sequence-specific DNA binding
AMC82_RS08905	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
AMC82_RS08915	COG0625	glutathione transferase activity
AMC82_RS08935	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS08940	COG0583	DNA-binding transcription factor activity
AMC82_RS08945	COG1335	isochorismatase
AMC82_RS08950	COG1741	Belongs to the pirin family
AMC82_RS08960	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMC82_RS08965	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AMC82_RS08975	COG1058	Belongs to the CinA family
AMC82_RS08975	COG1546	Belongs to the CinA family
AMC82_RS08995	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AMC82_RS09015	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS09025	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AMC82_RS09030	COG0583	DNA-binding transcription factor activity
AMC82_RS09035	COG0737	Belongs to the 5'-nucleotidase family
AMC82_RS09050	COG1522	sequence-specific DNA binding
AMC82_RS09055	COG0686	Belongs to the AlaDH PNT family
AMC82_RS09070	COG2897	thiosulfate sulfurtransferase activity
AMC82_RS09085	COG3806	Anti-sigma factor
AMC82_RS09090	COG0300	oxidoreductase activity
AMC82_RS09095	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AMC82_RS09110	COG0415	Belongs to the DNA photolyase family
AMC82_RS09120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMC82_RS09125	COG0243	molybdopterin cofactor binding
AMC82_RS09135	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMC82_RS09145	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMC82_RS09160	COG0450	alkyl hydroperoxide reductase
AMC82_RS09245	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AMC82_RS09255	COG0525	valine-tRNA ligase activity
AMC82_RS09280	COG0316	Belongs to the HesB IscA family
AMC82_RS09285	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AMC82_RS09290	COG0018	arginyl-trna synthetase
AMC82_RS09300	COG1472	Belongs to the glycosyl hydrolase 3 family
AMC82_RS09305	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMC82_RS09315	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMC82_RS09320	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMC82_RS09325	COG0805	protein transport
AMC82_RS09330	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMC82_RS09335	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AMC82_RS09340	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AMC82_RS09345	COG0739	heme binding
AMC82_RS09355	COG1862	Preprotein translocase
AMC82_RS09380	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AMC82_RS09410	COG0544	peptidyl-prolyl cis-trans isomerase activity
AMC82_RS09415	COG2801	Transposase and inactivated derivatives
AMC82_RS09420	COG2963	transposase activity
AMC82_RS09430	COG1032	radical SAM domain protein
AMC82_RS09450	COG2003	Belongs to the UPF0758 family
AMC82_RS09455	COG0024	Methionine aminopeptidase
AMC82_RS09470	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMC82_RS09475	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMC82_RS09480	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMC82_RS09485	COG0154	amidase activity
AMC82_RS09495	COG3811	Belongs to the UPF0386 family
AMC82_RS09510	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMC82_RS09530	COG4765	Protein conserved in bacteria
AMC82_RS09540	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AMC82_RS09550	COG0511	ligase activity, forming carbon-carbon bonds
AMC82_RS09555	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AMC82_RS09565	COG0436	Aminotransferase
AMC82_RS09575	COG3243	poly(R)-hydroxyalkanoic acid synthase
AMC82_RS09585	COG0436	Aminotransferase
AMC82_RS09600	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AMC82_RS09630	COG1278	Cold shock
AMC82_RS09660	COG3795	YCII-related domain
AMC82_RS09710	COG1126	abc transporter atp-binding protein
AMC82_RS09715	COG0765	amino acid transport
AMC82_RS09720	COG4597	amino acid ABC transporter
AMC82_RS09725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMC82_RS09730	COG0626	cystathionine gamma-synthase activity
AMC82_RS09745	COG2267	carboxylic ester hydrolase activity
AMC82_RS09750	COG1045	serine acetyltransferase
AMC82_RS09765	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AMC82_RS09775	COG0537	adenosine 5'-monophosphoramidase activity
AMC82_RS09820	COG0052	Belongs to the universal ribosomal protein uS2 family
AMC82_RS09825	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMC82_RS09830	COG0528	UMP kinase activity
AMC82_RS09835	COG0233	cytoplasmic translational termination
AMC82_RS09840	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMC82_RS09850	COG0750	zinc metalloprotease
AMC82_RS09855	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMC82_RS09860	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AMC82_RS09865	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMC82_RS09870	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AMC82_RS09875	COG3494	Protein of unknown function (DUF1009)
AMC82_RS09880	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AMC82_RS09890	COG0658	competence protein
AMC82_RS09890	COG2333	competence protein COMEC
AMC82_RS09895	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMC82_RS09905	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AMC82_RS09910	COG0148	phosphopyruvate hydratase activity
AMC82_RS09920	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AMC82_RS09925	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMC82_RS09925	COG0022	dehydrogenase e1 component
AMC82_RS09935	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMC82_RS09950	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMC82_RS09965	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AMC82_RS09975	COG2867	negative regulation of translational initiation
AMC82_RS09980	COG1546	Belongs to the CinA family
AMC82_RS09980	COG1058	Belongs to the CinA family
AMC82_RS09985	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AMC82_RS09985	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AMC82_RS10000	COG2204	response regulator
AMC82_RS10020	COG3119	arylsulfatase activity
AMC82_RS10025	COG1231	oxidoreductase activity
AMC82_RS10035	COG0667	Aldo Keto reductase
AMC82_RS10040	COG3048	D-serine ammonia-lyase activity
AMC82_RS10050	COG0765	amino acid transport
AMC82_RS10055	COG4597	amino acid ABC transporter
AMC82_RS10060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMC82_RS10065	COG0583	DNA-binding transcription factor activity
AMC82_RS10070	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMC82_RS10075	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMC82_RS10085	COG5000	phosphorelay sensor kinase activity
AMC82_RS10090	COG2204	response regulator
AMC82_RS10095	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMC82_RS10100	COG1923	regulation of RNA biosynthetic process
AMC82_RS10105	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMC82_RS10110	COG3956	TIGRFAM MazG family protein
AMC82_RS10140	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMC82_RS10145	COG0679	Auxin Efflux Carrier
AMC82_RS10150	COG0785	Cytochrome C biogenesis protein
AMC82_RS10210	COG0583	DNA-binding transcription factor activity
AMC82_RS10215	COG5265	(ABC) transporter
AMC82_RS10260	COG1653	transport
AMC82_RS10265	COG1175	transmembrane transport
AMC82_RS10270	COG0395	ABC-type sugar transport system, permease component
AMC82_RS10275	COG3842	ATPase activity
AMC82_RS10280	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS10285	COG1312	Catalyzes the dehydration of D-mannonate
AMC82_RS10290	COG2186	Transcriptional regulator
AMC82_RS10295	COG0747	negative chemotaxis
AMC82_RS10300	COG0601	transmembrane transport
AMC82_RS10305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMC82_RS10310	COG0444	Belongs to the ABC transporter superfamily
AMC82_RS10315	COG4608	Belongs to the ABC transporter superfamily
AMC82_RS10320	COG0431	NADPH-dependent FMN reductase
AMC82_RS10325	COG1609	Transcriptional regulator
AMC82_RS10340	COG1175	transmembrane transport
AMC82_RS10345	COG0395	ABC-type sugar transport system, permease component
AMC82_RS10375	COG1136	(ABC) transporter
AMC82_RS10375	COG0577	efflux transmembrane transporter activity
AMC82_RS10380	COG1136	(ABC) transporter
AMC82_RS10380	COG0577	efflux transmembrane transporter activity
AMC82_RS10395	COG1183	phosphatidylcholine synthase activity
AMC82_RS10405	COG3845	ABC transporter
AMC82_RS10415	COG1079	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS10425	COG1879	ABC-type sugar transport system periplasmic component
AMC82_RS10430	COG1129	ABC transporter
AMC82_RS10435	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS10440	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS10445	COG2186	Transcriptional regulator
AMC82_RS10450	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMC82_RS10455	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMC82_RS10465	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMC82_RS10475	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMC82_RS10490	COG0456	acetyltransferase
AMC82_RS10490	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMC82_RS10500	COG4166	transmembrane transport
AMC82_RS10515	COG0174	glutamine synthetase
AMC82_RS10520	COG0347	Belongs to the P(II) protein family
AMC82_RS10525	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMC82_RS10525	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AMC82_RS10540	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AMC82_RS10545	COG0629	single-stranded DNA binding
AMC82_RS10550	COG2095	MarC family integral membrane protein
AMC82_RS10555	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMC82_RS10565	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMC82_RS10580	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AMC82_RS10585	COG0343	queuine tRNA-ribosyltransferase activity
AMC82_RS10600	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMC82_RS10615	COG0483	inositol monophosphate 1-phosphatase activity
AMC82_RS10620	COG3842	ATPase activity
AMC82_RS10630	COG1840	ABC-type Fe3 transport system, periplasmic component
AMC82_RS10635	COG1840	ABC-type Fe3 transport system, periplasmic component
AMC82_RS10645	COG0784	Response regulator, receiver
AMC82_RS10645	COG4191	Histidine kinase
AMC82_RS10675	COG1175	transmembrane transport
AMC82_RS10690	COG1609	Transcriptional regulator
AMC82_RS10695	COG0612	Peptidase, M16
AMC82_RS10735	COG1802	Transcriptional regulator
AMC82_RS10750	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AMC82_RS10755	COG0405	Gamma-glutamyltransferase
AMC82_RS10770	COG0668	transmembrane transport
AMC82_RS10775	COG1522	sequence-specific DNA binding
AMC82_RS10780	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AMC82_RS10805	COG0861	Integral membrane protein TerC family
AMC82_RS10810	COG0321	lipoyl(octanoyl) transferase activity
AMC82_RS10810	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AMC82_RS10815	COG0084	hydrolase, TatD family'
AMC82_RS10820	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMC82_RS10825	COG0730	response to heat
AMC82_RS10835	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMC82_RS10870	COG2814	Major facilitator Superfamily
AMC82_RS10875	COG0583	DNA-binding transcription factor activity
AMC82_RS10880	COG2824	Alkylphosphonate utilization operon protein PhnA
AMC82_RS10915	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMC82_RS10920	COG0134	indole-3-glycerol-phosphate synthase activity
AMC82_RS10925	COG0315	cyclic pyranopterin monophosphate synthase activity
AMC82_RS10940	COG0513	Belongs to the DEAD box helicase family
AMC82_RS10955	COG0372	Belongs to the citrate synthase family
AMC82_RS10960	COG0372	Belongs to the citrate synthase family
AMC82_RS10965	COG0504	CTP synthase activity
AMC82_RS10975	COG0149	triose-phosphate isomerase activity
AMC82_RS10985	COG0187	DNA topoisomerase II activity
AMC82_RS10995	COG0628	permease
AMC82_RS11030	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMC82_RS11040	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AMC82_RS11045	COG0822	iron-sulfur transferase activity
AMC82_RS11050	COG0302	gtp cyclohydrolase
AMC82_RS11055	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AMC82_RS11060	COG1752	Esterase of the alpha-beta hydrolase superfamily
AMC82_RS11085	COG2267	carboxylic ester hydrolase activity
AMC82_RS11100	COG1686	Belongs to the peptidase S11 family
AMC82_RS11115	COG1760	l-serine dehydratase
AMC82_RS11135	COG2239	Acts as a magnesium transporter
AMC82_RS11140	COG0242	peptide deformylase activity
AMC82_RS11165	COG0321	lipoyl(octanoyl) transferase activity
AMC82_RS11180	COG4770	biotin carboxylase activity
AMC82_RS11185	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
AMC82_RS11190	COG2153	protein acetylation
AMC82_RS11195	COG1671	Belongs to the UPF0178 family
AMC82_RS11205	COG2259	Doxx family
AMC82_RS11210	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMC82_RS11225	COG0546	phosphoglycolate phosphatase activity
AMC82_RS11235	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMC82_RS11255	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AMC82_RS11260	COG0509	glycine decarboxylation via glycine cleavage system
AMC82_RS11265	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMC82_RS11265	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMC82_RS11280	COG0316	Belongs to the HesB IscA family
AMC82_RS11285	COG2151	metal-sulfur cluster biosynthetic enzyme
AMC82_RS11290	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMC82_RS11295	COG0719	Fe-S assembly protein
AMC82_RS11300	COG0396	ATPase activity
AMC82_RS11310	COG0719	Fe-S assembly protein
AMC82_RS11315	COG1104	cysteine desulfurase activity
AMC82_RS11320	COG2945	thiolester hydrolase activity
AMC82_RS11335	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AMC82_RS11340	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMC82_RS11360	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AMC82_RS11365	COG2833	Protein of unknown function (DUF455)
AMC82_RS11370	COG1196	nuclear chromosome segregation
AMC82_RS11370	COG0741	lytic transglycosylase activity
AMC82_RS11370	COG0739	heme binding
AMC82_RS11375	COG0513	Belongs to the DEAD box helicase family
AMC82_RS11390	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMC82_RS11415	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMC82_RS11445	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AMC82_RS11450	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMC82_RS11455	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
AMC82_RS11460	COG0047	phosphoribosylformylglycinamidine synthase activity
AMC82_RS11475	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMC82_RS11485	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMC82_RS11510	COG2814	Major facilitator Superfamily
AMC82_RS11515	COG2814	Major facilitator Superfamily
AMC82_RS11525	COG0483	inositol monophosphate 1-phosphatase activity
AMC82_RS11530	COG0483	inositol monophosphate 1-phosphatase activity
AMC82_RS11535	COG0037	tRNA processing
AMC82_RS11540	COG2066	Belongs to the glutaminase family
AMC82_RS11545	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMC82_RS11555	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AMC82_RS11560	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AMC82_RS11575	COG0538	isocitrate dehydrogenase activity
AMC82_RS11600	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMC82_RS11605	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMC82_RS11615	COG2313	pseudouridylate synthase activity
AMC82_RS11650	COG3106	COG3106 Predicted ATPase
AMC82_RS11655	COG3768	UPF0283 membrane protein
AMC82_RS11665	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AMC82_RS11675	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMC82_RS11685	COG0633	Ferredoxin
AMC82_RS11705	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AMC82_RS11710	COG1686	Belongs to the peptidase S11 family
AMC82_RS11730	COG1127	ABC transporter
AMC82_RS11740	COG4948	Mandelate Racemase Muconate Lactonizing
AMC82_RS11745	COG2814	Major facilitator Superfamily
AMC82_RS11765	COG0281	malic enzyme
AMC82_RS11765	COG0280	phosphate acetyltransferase
AMC82_RS11770	COG0328	RNA-DNA hybrid ribonuclease activity
AMC82_RS11780	COG0778	Nitroreductase
AMC82_RS11785	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMC82_RS11800	COG0823	Involved in the tonB-independent uptake of proteins
AMC82_RS11820	COG1132	(ABC) transporter
AMC82_RS11825	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AMC82_RS11845	COG1254	Belongs to the acylphosphatase family
AMC82_RS11855	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMC82_RS11860	COG0546	phosphoglycolate phosphatase activity
AMC82_RS11865	COG2989	Protein conserved in bacteria
AMC82_RS11870	COG0114	fumarate hydratase activity
AMC82_RS11875	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMC82_RS11885	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AMC82_RS11885	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AMC82_RS11895	COG3706	GGDEF domain
AMC82_RS11910	COG1846	Transcriptional regulator
AMC82_RS11925	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMC82_RS11930	COG2226	methyltransferase
AMC82_RS11940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMC82_RS11945	COG1120	ATPase activity
AMC82_RS11950	COG2390	Transcriptional regulator
AMC82_RS11955	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMC82_RS11960	COG3958	Transketolase
AMC82_RS11965	COG3959	Transketolase, thiamine diphosphate binding domain
AMC82_RS11970	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS11975	COG1879	ABC-type sugar transport system periplasmic component
AMC82_RS11985	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS11990	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS12005	COG0746	molybdenum cofactor guanylyltransferase activity
AMC82_RS12010	COG1763	Mo-molybdopterin cofactor biosynthetic process
AMC82_RS12020	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
AMC82_RS12035	COG0667	Aldo Keto reductase
AMC82_RS12045	COG1764	response to oxidative stress
AMC82_RS12050	COG2205	protein histidine kinase activity
AMC82_RS12060	COG0596	Alpha beta hydrolase
AMC82_RS12080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMC82_RS12085	COG4215	(ABC) transporter
AMC82_RS12095	COG5425	PFAM Usg family protein
AMC82_RS12115	COG0640	Transcriptional regulator
AMC82_RS12150	COG2084	Dehydrogenase
AMC82_RS12160	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AMC82_RS12180	COG1522	sequence-specific DNA binding
AMC82_RS12185	COG1573	uracil-dna glycosylase
AMC82_RS12195	COG2202	Pas domain
AMC82_RS12195	COG2205	protein histidine kinase activity
AMC82_RS12205	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AMC82_RS12210	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AMC82_RS12225	COG2814	Major facilitator Superfamily
AMC82_RS12240	COG0583	DNA-binding transcription factor activity
AMC82_RS12245	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS12250	COG0842	Transport permease protein
AMC82_RS12255	COG1131	(ABC) transporter
AMC82_RS12265	COG3507	Belongs to the glycosyl hydrolase 43 family
AMC82_RS12270	COG0667	Aldo Keto reductase
AMC82_RS12295	COG0395	ABC-type sugar transport system, permease component
AMC82_RS12300	COG1175	transmembrane transport
AMC82_RS12330	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMC82_RS12365	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMC82_RS12375	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AMC82_RS12380	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMC82_RS12465	COG1492	cobalamin metabolic process
AMC82_RS12485	COG0583	DNA-binding transcription factor activity
AMC82_RS12500	COG0583	DNA-binding transcription factor activity
AMC82_RS12505	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMC82_RS12510	COG1285	pathogenesis
AMC82_RS12525	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMC82_RS12560	COG0745	RESPONSE REGULATOR receiver
AMC82_RS12565	COG0640	Transcriptional regulator
AMC82_RS12575	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AMC82_RS12580	COG1393	Belongs to the ArsC family
AMC82_RS12590	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AMC82_RS12590	COG3264	Mechanosensitive ion channel
AMC82_RS12600	COG0745	RESPONSE REGULATOR receiver
AMC82_RS12605	COG2814	Major facilitator Superfamily
AMC82_RS12625	COG0596	Alpha beta hydrolase
AMC82_RS12645	COG1846	Transcriptional regulator
AMC82_RS12660	COG1764	response to oxidative stress
AMC82_RS12685	COG1607	acyl-coa hydrolase
AMC82_RS12710	COG2226	methyltransferase
AMC82_RS12715	COG0702	epimerase
AMC82_RS12770	COG0556	nucleotide-excision repair
AMC82_RS12810	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMC82_RS12815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMC82_RS12850	COG5002	protein histidine kinase activity
AMC82_RS12885	COG2354	Protein conserved in bacteria
AMC82_RS12895	COG0702	epimerase
AMC82_RS12905	COG0137	argininosuccinate synthase activity
AMC82_RS12915	COG2941	Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol
AMC82_RS12950	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AMC82_RS12965	COG2207	Transcriptional regulator
AMC82_RS12965	COG1917	Cupin 2, conserved barrel domain protein
AMC82_RS12975	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMC82_RS12990	COG0025	NhaP-type Na H and K H
AMC82_RS12995	COG3158	transport of potassium into the cell
AMC82_RS13050	COG1136	(ABC) transporter
AMC82_RS13060	COG2207	Transcriptional regulator
AMC82_RS13060	COG1917	Cupin 2, conserved barrel domain protein
AMC82_RS13075	COG1845	cytochrome c oxidase, subunit III
AMC82_RS13080	COG1845	cytochrome c oxidase, subunit III
AMC82_RS13085	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AMC82_RS13090	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AMC82_RS13110	COG3453	Protein conserved in bacteria
AMC82_RS13110	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMC82_RS13120	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMC82_RS13135	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS13210	COG5001	Diguanylate cyclase
AMC82_RS13210	COG3300	MHYT domain
AMC82_RS13225	COG2208	phosphoserine phosphatase activity
AMC82_RS13250	COG1280	lysine exporter protein (LysE YggA)
AMC82_RS13260	COG5001	Diguanylate cyclase
AMC82_RS13260	COG3300	MHYT domain
AMC82_RS13310	COG0395	ABC-type sugar transport system, permease component
AMC82_RS13325	COG1940	carbohydrate kinase activity
AMC82_RS13325	COG1846	Transcriptional regulator
AMC82_RS13335	COG2204	response regulator
AMC82_RS13340	COG5002	protein histidine kinase activity
AMC82_RS13345	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AMC82_RS13380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMC82_RS13385	COG0583	DNA-binding transcription factor activity
AMC82_RS13405	COG1120	ATPase activity
AMC82_RS13410	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMC82_RS13415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMC82_RS13425	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AMC82_RS13510	COG0179	Fumarylacetoacetate (FAA) hydrolase
AMC82_RS13550	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AMC82_RS13555	COG1121	(ABC) transporter
AMC82_RS13590	COG1253	flavin adenine dinucleotide binding
AMC82_RS13635	COG0384	phenazine biosynthesis protein PhzF
AMC82_RS13650	COG3842	ATPase activity
AMC82_RS13655	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMC82_RS13670	COG1846	Transcriptional regulator
AMC82_RS13675	COG0667	Aldo Keto reductase
AMC82_RS13680	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMC82_RS13705	COG1260	myo-inositol-1-phosphate synthase
AMC82_RS13730	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AMC82_RS13745	COG1069	ribulokinase activity
AMC82_RS13750	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMC82_RS13765	COG1175	transmembrane transport
AMC82_RS13790	COG0463	Glycosyl transferase, family 2
AMC82_RS13795	COG2207	Transcriptional regulator
AMC82_RS13800	COG1064	alcohol dehydrogenase
AMC82_RS13810	COG1252	NADH dehydrogenase
AMC82_RS13825	COG1522	sequence-specific DNA binding
AMC82_RS13830	COG1794	racemase activity, acting on amino acids and derivatives
AMC82_RS13835	COG1846	Transcriptional regulator
AMC82_RS13835	COG0456	acetyltransferase
AMC82_RS13840	COG1309	transcriptional regulator
AMC82_RS13845	COG2814	Major facilitator Superfamily
AMC82_RS13850	COG1733	regulation of RNA biosynthetic process
AMC82_RS13865	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AMC82_RS13875	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AMC82_RS13895	COG0668	transmembrane transport
AMC82_RS13950	COG0656	L-ascorbic acid biosynthetic process
AMC82_RS13960	COG0028	Belongs to the TPP enzyme family
AMC82_RS13970	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS13985	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMC82_RS13990	COG3830	Belongs to the UPF0237 family
AMC82_RS13990	COG0560	Phosphoserine phosphatase
AMC82_RS13995	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMC82_RS14000	COG0330	HflC and HflK could
AMC82_RS14005	COG0330	HflC and HflK could
AMC82_RS14015	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMC82_RS14045	COG0277	FAD linked oxidase domain protein
AMC82_RS14050	COG0667	Aldo Keto reductase
AMC82_RS14055	COG0583	DNA-binding transcription factor activity
AMC82_RS14060	COG3180	Ammonia monooxygenase
AMC82_RS14065	COG0640	Transcriptional regulator
AMC82_RS14075	COG0740	serine-type endopeptidase activity
AMC82_RS14090	COG2885	chlorophyll binding
AMC82_RS14095	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMC82_RS14100	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMC82_RS14115	COG2719	SpoVR family
AMC82_RS14120	COG2718	Belongs to the UPF0229 family
AMC82_RS14125	COG2766	serine protein kinase
AMC82_RS14150	COG1335	isochorismatase
AMC82_RS14180	COG0006	proline dipeptidase activity
AMC82_RS14185	COG2264	protein methyltransferase activity
AMC82_RS14190	COG1999	signal sequence binding
AMC82_RS14195	COG2972	Histidine kinase
AMC82_RS14195	COG0840	transmembrane signaling receptor activity
AMC82_RS14200	COG0835	chemotaxis
AMC82_RS14220	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMC82_RS14235	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMC82_RS14245	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMC82_RS14250	COG0849	cell division
AMC82_RS14255	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AMC82_RS14260	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMC82_RS14270	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AMC82_RS14275	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMC82_RS14280	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMC82_RS14290	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMC82_RS14295	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMC82_RS14305	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMC82_RS14320	COG0275	rRNA processing
AMC82_RS14325	COG2001	Belongs to the MraZ family
AMC82_RS14350	COG3023	N-Acetylmuramoyl-L-alanine amidase
AMC82_RS14355	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AMC82_RS14365	COG1280	lysine exporter protein (LysE YggA)
AMC82_RS14390	COG3757	hydrolase, family 25
AMC82_RS14405	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AMC82_RS14430	COG0697	spore germination
AMC82_RS14435	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AMC82_RS14440	COG0028	Belongs to the TPP enzyme family
AMC82_RS14445	COG0251	oxidation-reduction process
AMC82_RS14460	COG1376	ErfK ybiS ycfS ynhG family protein
AMC82_RS14465	COG1192	Involved in chromosome partitioning
AMC82_RS14480	COG0174	glutamine synthetase
AMC82_RS14510	COG2011	ABC-type metal ion transport system permease component
AMC82_RS14515	COG3842	ATPase activity
AMC82_RS14525	COG0673	inositol 2-dehydrogenase activity
AMC82_RS14530	COG0395	ABC-type sugar transport system, permease component
AMC82_RS14535	COG1175	transmembrane transport
AMC82_RS14545	COG2971	BadF BadG BcrA BcrD
AMC82_RS14550	COG2188	Transcriptional regulator
AMC82_RS14565	COG4702	Belongs to the UPF0303 family
AMC82_RS14570	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AMC82_RS14580	COG0395	ABC-type sugar transport system, permease component
AMC82_RS14585	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMC82_RS14595	COG3842	ATPase activity
AMC82_RS14660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMC82_RS14680	COG2968	Membrane
AMC82_RS14695	COG0432	Pfam Uncharacterised protein family UPF0047
AMC82_RS14715	COG0072	phenylalanine-tRNA ligase activity
AMC82_RS14715	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMC82_RS14725	COG2207	Transcriptional regulator
AMC82_RS14725	COG1917	Cupin 2, conserved barrel domain protein
AMC82_RS14745	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMC82_RS14755	COG1063	alcohol dehydrogenase
AMC82_RS14765	COG0514	ATP-dependent DNA helicase (RecQ)
AMC82_RS14770	COG0358	DNA primase activity
AMC82_RS14785	COG0505	Belongs to the CarA family
AMC82_RS14790	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMC82_RS14805	COG0534	Mate efflux family protein
AMC82_RS14815	COG0667	Aldo Keto reductase
AMC82_RS14820	COG2321	neutral zinc metallopeptidase
AMC82_RS14835	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AMC82_RS14840	COG1573	uracil-dna glycosylase
AMC82_RS14850	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMC82_RS14860	COG1301	dicarboxylic acid transport
AMC82_RS14865	COG4191	Histidine kinase
AMC82_RS14870	COG2204	response regulator
AMC82_RS14875	COG1522	sequence-specific DNA binding
AMC82_RS14880	COG0492	ferredoxin-NADP+ reductase activity
AMC82_RS14885	COG0583	DNA-binding transcription factor activity
AMC82_RS14895	COG1902	pentaerythritol trinitrate reductase activity
AMC82_RS14910	COG0583	DNA-binding transcription factor activity
AMC82_RS14915	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMC82_RS14915	COG0456	acetyltransferase
AMC82_RS14925	COG0387	Pfam Sodium calcium exchanger
AMC82_RS14935	COG1442	glycosyl transferase family 8
AMC82_RS14960	COG2133	pyrroloquinoline quinone binding
AMC82_RS14975	COG1278	Cold shock
AMC82_RS14990	COG1733	regulation of RNA biosynthetic process
AMC82_RS15000	COG0745	RESPONSE REGULATOR receiver
AMC82_RS15005	COG1846	Transcriptional regulator
AMC82_RS15020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMC82_RS15025	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMC82_RS15045	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMC82_RS15055	COG1496	oxidoreductase activity
AMC82_RS15070	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMC82_RS15080	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
AMC82_RS15085	COG5001	Diguanylate cyclase
AMC82_RS15085	COG3300	MHYT domain
AMC82_RS15095	COG0193	aminoacyl-tRNA hydrolase activity
AMC82_RS15105	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AMC82_RS15130	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMC82_RS15135	COG2857	Cytochrome c1
AMC82_RS15135	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AMC82_RS15155	COG1132	(ABC) transporter
AMC82_RS15165	COG1132	(ABC) transporter
AMC82_RS15170	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AMC82_RS15185	COG0408	coproporphyrinogen oxidase activity
AMC82_RS15200	COG0617	tRNA 3'-terminal CCA addition
AMC82_RS15215	COG0714	Associated with various cellular activities
AMC82_RS15235	COG0454	-acetyltransferase
AMC82_RS15245	COG0435	Glutathione S-transferase
AMC82_RS15275	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMC82_RS15280	COG3135	benzoate transporter
AMC82_RS15285	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS15290	COG0740	serine-type endopeptidase activity
AMC82_RS15295	COG3416	Protein conserved in bacteria
AMC82_RS15300	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AMC82_RS15305	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AMC82_RS15320	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMC82_RS15320	COG0512	Glutamine amidotransferase of anthranilate synthase
AMC82_RS15325	COG1629	transport
AMC82_RS15325	COG4771	TonB-dependent receptor
AMC82_RS15335	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AMC82_RS15340	COG2862	Uncharacterized protein family, UPF0114
AMC82_RS15350	COG2197	response regulator
AMC82_RS15365	COG1435	thymidine kinase activity
AMC82_RS15380	COG4175	Glycine betaine
AMC82_RS15395	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AMC82_RS15410	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AMC82_RS15425	COG0366	Alpha amylase catalytic
AMC82_RS15435	COG0601	transmembrane transport
AMC82_RS15440	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMC82_RS15450	COG4608	Belongs to the ABC transporter superfamily
AMC82_RS15460	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMC82_RS15470	COG0174	glutamine synthetase
AMC82_RS15490	COG1160	GTP binding
AMC82_RS15510	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AMC82_RS15530	COG0024	Methionine aminopeptidase
AMC82_RS15545	COG4941	Belongs to the sigma-70 factor family
AMC82_RS15550	COG3795	YCII-related domain
AMC82_RS15555	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMC82_RS15560	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS15570	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMC82_RS15585	COG0583	DNA-binding transcription factor activity
AMC82_RS15605	COG0402	S-adenosylhomocysteine deaminase activity
AMC82_RS15620	COG0671	phosphoesterase, PA-phosphatase related
AMC82_RS15620	COG2453	phosphatase
AMC82_RS15625	COG2267	carboxylic ester hydrolase activity
AMC82_RS15630	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMC82_RS15645	COG2268	Band 7 protein
AMC82_RS15655	COG2351	hydroxyisourate hydrolase activity
AMC82_RS15660	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
AMC82_RS15670	COG3648	Uricase
AMC82_RS15670	COG3195	allantoin biosynthetic process
AMC82_RS15685	COG2022	thiamine diphosphate biosynthetic process
AMC82_RS15685	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS15690	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AMC82_RS15690	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS15695	COG0784	Response regulator, receiver
AMC82_RS15695	COG5002	protein histidine kinase activity
AMC82_RS15695	COG2205	protein histidine kinase activity
AMC82_RS15705	COG2814	Major facilitator Superfamily
AMC82_RS15710	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS15715	COG1609	Transcriptional regulator
AMC82_RS15720	COG4335	DNA alkylation repair
AMC82_RS15725	COG0513	Belongs to the DEAD box helicase family
AMC82_RS15735	COG2308	Evidence 4 Homologs of previously reported genes of
AMC82_RS15760	COG0129	dihydroxy-acid dehydratase activity
AMC82_RS15765	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS15775	COG4214	carbohydrate transport
AMC82_RS15805	COG0673	inositol 2-dehydrogenase activity
AMC82_RS15815	COG4213	ABC transporter substrate-binding protein
AMC82_RS15820	COG4214	carbohydrate transport
AMC82_RS15825	COG1129	ABC transporter
AMC82_RS15850	COG0798	PFAM Bile acid sodium symporter
AMC82_RS15860	COG0431	NADPH-dependent FMN reductase
AMC82_RS15870	COG0640	Transcriptional regulator
AMC82_RS15885	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMC82_RS15900	COG0438	transferase activity, transferring glycosyl groups
AMC82_RS15915	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AMC82_RS15915	COG2755	lipolytic protein G-D-S-L family
AMC82_RS15920	COG0456	acetyltransferase
AMC82_RS15920	COG0454	-acetyltransferase
AMC82_RS15925	COG3108	Peptidase M15
AMC82_RS15945	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS15950	COG1129	ABC transporter
AMC82_RS15975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS15985	COG0500	methyltransferase
AMC82_RS15990	COG1216	Glycosyl transferase, family 2
AMC82_RS15990	COG0463	Glycosyl transferase, family 2
AMC82_RS15995	COG1132	(ABC) transporter
AMC82_RS16000	COG1216	Glycosyl transferase, family 2
AMC82_RS16000	COG1442	glycosyl transferase family 8
AMC82_RS16040	COG1396	sequence-specific DNA binding
AMC82_RS16045	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMC82_RS16065	COG0438	transferase activity, transferring glycosyl groups
AMC82_RS16075	COG1216	Glycosyl transferase, family 2
AMC82_RS16085	COG1215	transferase activity, transferring glycosyl groups
AMC82_RS16095	COG2244	polysaccharide biosynthetic process
AMC82_RS16105	COG1215	transferase activity, transferring glycosyl groups
AMC82_RS16135	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMC82_RS16140	COG4618	COG4618 ABC-type protease lipase transport system, ATPase and permease components
AMC82_RS16160	COG3206	protein involved in exopolysaccharide biosynthesis
AMC82_RS16160	COG0489	protein tyrosine kinase activity
AMC82_RS16185	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AMC82_RS16205	COG0400	carboxylic ester hydrolase activity
AMC82_RS16210	COG0346	lactoylglutathione lyase activity
AMC82_RS16215	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMC82_RS16220	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMC82_RS16225	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
AMC82_RS16225	COG0662	Cupin 2, conserved barrel domain protein
AMC82_RS16240	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS16255	COG1309	transcriptional regulator
AMC82_RS16260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMC82_RS16265	COG1131	(ABC) transporter
AMC82_RS16270	COG0842	Transport permease protein
AMC82_RS16275	COG0842	Transport permease protein
AMC82_RS16300	COG2076	Multidrug Resistance protein
AMC82_RS16310	COG2346	COG2346, Truncated hemoglobins
AMC82_RS16350	COG3720	iron ion transport
AMC82_RS16355	COG4558	Periplasmic binding protein
AMC82_RS16360	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMC82_RS16365	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AMC82_RS16390	COG0784	Response regulator, receiver
AMC82_RS16400	COG0493	'glutamate synthase
AMC82_RS16420	COG3321	synthase
AMC82_RS16420	COG0604	alcohol dehydrogenase
AMC82_RS16420	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS16425	COG0583	DNA-binding transcription factor activity
AMC82_RS16435	COG4251	negative regulation of phosphorylation
AMC82_RS16440	COG1309	transcriptional regulator
AMC82_RS16470	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMC82_RS16475	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMC82_RS16480	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMC82_RS16495	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AMC82_RS16500	COG0830	nickel cation binding
AMC82_RS16505	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
AMC82_RS16510	COG3706	GGDEF domain
AMC82_RS16520	COG0804	urea catabolic process
AMC82_RS16525	COG1442	glycosyl transferase family 8
AMC82_RS16530	COG3755	Protein conserved in bacteria
AMC82_RS16535	COG0832	Belongs to the urease beta subunit family
AMC82_RS16540	COG3813	Protein conserved in bacteria
AMC82_RS16545	COG0831	urea catabolic process
AMC82_RS16550	COG0829	nickel cation binding
AMC82_RS16590	COG0784	Response regulator, receiver
AMC82_RS16590	COG2205	protein histidine kinase activity
AMC82_RS16590	COG2198	Histidine kinase
AMC82_RS16600	COG0683	leucine binding
AMC82_RS16625	COG0559	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS16700	COG0564	pseudouridine synthase activity
AMC82_RS16705	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMC82_RS16715	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMC82_RS16735	COG0129	dihydroxy-acid dehydratase activity
AMC82_RS16750	COG0657	acetylesterase activity
AMC82_RS16760	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS16775	COG2094	Belongs to the DNA glycosylase MPG family
AMC82_RS16800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMC82_RS16810	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AMC82_RS16820	COG1959	2 iron, 2 sulfur cluster binding
AMC82_RS16825	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS16830	COG3622	Belongs to the hyi family
AMC82_RS16845	COG3842	ATPase activity
AMC82_RS16850	COG0395	ABC-type sugar transport system, permease component
AMC82_RS16855	COG1175	transmembrane transport
AMC82_RS16860	COG1653	transport
AMC82_RS16865	COG1940	carbohydrate kinase activity
AMC82_RS16865	COG1846	Transcriptional regulator
AMC82_RS16870	COG1653	transport
AMC82_RS16890	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMC82_RS16900	COG0839	Belongs to the complex I subunit 6 family
AMC82_RS16905	COG0713	ATP synthesis coupled electron transport
AMC82_RS16910	COG0651	ATP synthesis coupled electron transport
AMC82_RS16920	COG0651	ATP synthesis coupled electron transport
AMC82_RS16940	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS16945	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS16950	COG0649	NAD binding
AMC82_RS16975	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMC82_RS16980	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AMC82_RS17035	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMC82_RS17040	COG0471	metal ion transport
AMC82_RS17040	COG3273	potassium ion transport
AMC82_RS17045	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AMC82_RS17050	COG1309	transcriptional regulator
AMC82_RS17055	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMC82_RS17060	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMC82_RS17080	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMC82_RS17085	COG1177	transmembrane transport
AMC82_RS17100	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AMC82_RS17105	COG1473	amidohydrolase
AMC82_RS17135	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMC82_RS17160	COG5001	Diguanylate cyclase
AMC82_RS17160	COG3300	MHYT domain
AMC82_RS17165	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMC82_RS17170	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AMC82_RS17175	COG0590	tRNA wobble adenosine to inosine editing
AMC82_RS17190	COG0683	leucine binding
AMC82_RS17200	COG0559	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS17225	COG0482	sulfurtransferase activity
AMC82_RS17235	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMC82_RS17250	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMC82_RS17255	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMC82_RS17260	COG0037	tRNA processing
AMC82_RS17270	COG2885	chlorophyll binding
AMC82_RS17275	COG0823	Involved in the tonB-independent uptake of proteins
AMC82_RS17295	COG0824	Thioesterase
AMC82_RS17320	COG1692	metallophosphoesterase
AMC82_RS17335	COG0217	transcriptional regulatory protein
AMC82_RS17340	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AMC82_RS17345	COG0840	transmembrane signaling receptor activity
AMC82_RS17350	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AMC82_RS17365	COG0632	four-way junction helicase activity
AMC82_RS17370	COG2255	four-way junction helicase activity
AMC82_RS17375	COG1408	metallophosphoesterase
AMC82_RS17380	COG0494	nUDIX hydrolase
AMC82_RS17385	COG2318	DinB family
AMC82_RS17395	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMC82_RS17395	COG0392	lysyltransferase activity
AMC82_RS17405	COG0668	transmembrane transport
AMC82_RS17410	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AMC82_RS17430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMC82_RS17475	COG0126	phosphoglycerate kinase activity
AMC82_RS17480	COG3588	fructose-bisphosphate aldolase
AMC82_RS17485	COG0384	phenazine biosynthesis protein PhzF
AMC82_RS17505	COG0254	rRNA binding
AMC82_RS17510	COG1132	(ABC) transporter
AMC82_RS17520	COG3422	double-strand break repair
AMC82_RS17545	COG0483	inositol monophosphate 1-phosphatase activity
AMC82_RS17555	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AMC82_RS17560	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AMC82_RS17565	COG4770	biotin carboxylase activity
AMC82_RS17570	COG2201	protein-glutamate methylesterase activity
AMC82_RS17580	COG0835	chemotaxis
AMC82_RS17585	COG0840	transmembrane signaling receptor activity
AMC82_RS17590	COG3290	protein histidine kinase activity
AMC82_RS17590	COG0840	transmembrane signaling receptor activity
AMC82_RS17600	COG0835	chemotaxis
AMC82_RS17605	COG2198	Histidine kinase
AMC82_RS17605	COG0643	Histidine kinase
AMC82_RS17640	COG0640	Transcriptional regulator
AMC82_RS17655	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMC82_RS17660	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AMC82_RS17665	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AMC82_RS17670	COG0457	Tetratricopeptide repeat
AMC82_RS17690	COG0583	DNA-binding transcription factor activity
AMC82_RS17695	COG1942	4-Oxalocrotonate Tautomerase
AMC82_RS17715	COG0469	pyruvate kinase activity
AMC82_RS17735	COG3750	Belongs to the UPF0335 family
AMC82_RS17740	COG0456	acetyltransferase
AMC82_RS17745	COG3108	Peptidase M15
AMC82_RS17750	COG2204	response regulator
AMC82_RS17775	COG5310	Homospermidine synthase
AMC82_RS17790	COG0737	Belongs to the 5'-nucleotidase family
AMC82_RS17795	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AMC82_RS17800	COG0330	HflC and HflK could
AMC82_RS17820	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AMC82_RS17825	COG2951	lytic endotransglycosylase activity
AMC82_RS17845	COG0069	glutamate synthase activity
AMC82_RS17845	COG0070	glutamate synthase
AMC82_RS17845	COG0067	glutamate synthase
AMC82_RS17865	COG0071	Belongs to the small heat shock protein (HSP20) family
AMC82_RS17980	COG2308	Evidence 4 Homologs of previously reported genes of
AMC82_RS17980	COG2307	Protein conserved in bacteria
AMC82_RS17995	COG0058	SHG alpha-glucan phosphorylase activity
AMC82_RS18000	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMC82_RS18005	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AMC82_RS18010	COG0297	glycogen (starch) synthase activity
AMC82_RS18015	COG0033	Phosphoglucomutase
AMC82_RS18020	COG1523	belongs to the glycosyl hydrolase 13 family
AMC82_RS18040	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AMC82_RS18040	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMC82_RS18050	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS18070	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AMC82_RS18080	COG2202	Pas domain
AMC82_RS18080	COG3920	Histidine kinase
AMC82_RS18115	COG5001	Diguanylate cyclase
AMC82_RS18130	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
AMC82_RS18140	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AMC82_RS18145	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMC82_RS18150	COG1609	Transcriptional regulator
AMC82_RS18155	COG1846	Transcriptional regulator
AMC82_RS18165	COG0523	cobalamin synthesis protein
AMC82_RS18180	COG1045	serine acetyltransferase
AMC82_RS18200	COG0583	DNA-binding transcription factor activity
AMC82_RS18230	COG0800	Aldolase
AMC82_RS18235	COG2954	triphosphatase activity
AMC82_RS18245	COG1054	Belongs to the UPF0176 family
AMC82_RS18265	COG0673	inositol 2-dehydrogenase activity
AMC82_RS18275	COG1879	ABC-type sugar transport system periplasmic component
AMC82_RS18280	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS18285	COG1129	ABC transporter
AMC82_RS18290	COG1609	Transcriptional regulator
AMC82_RS18295	COG2115	Belongs to the xylose isomerase family
AMC82_RS18300	COG1070	Carbohydrate kinase
AMC82_RS18305	COG1609	Transcriptional regulator
AMC82_RS18330	COG1253	flavin adenine dinucleotide binding
AMC82_RS18335	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMC82_RS18340	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AMC82_RS18350	COG0583	DNA-binding transcription factor activity
AMC82_RS18355	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AMC82_RS18360	COG3842	ATPase activity
AMC82_RS18365	COG1176	ABC-type spermidine putrescine transport system, permease component I
AMC82_RS18370	COG1177	transmembrane transport
AMC82_RS18395	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AMC82_RS18420	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMC82_RS18425	COG1309	transcriptional regulator
AMC82_RS18470	COG1175	transmembrane transport
AMC82_RS18490	COG1940	carbohydrate kinase activity
AMC82_RS18515	COG1764	response to oxidative stress
AMC82_RS18520	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS18545	COG2186	Transcriptional regulator
AMC82_RS18550	COG4948	Mandelate Racemase Muconate Lactonizing
AMC82_RS18560	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS18580	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS18585	COG3386	PFAM SMP-30 Gluconolaconase
AMC82_RS18595	COG3842	ATPase activity
AMC82_RS18600	COG0395	ABC-type sugar transport system, permease component
AMC82_RS18605	COG1175	transmembrane transport
AMC82_RS18610	COG1653	transport
AMC82_RS18615	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AMC82_RS18620	COG0720	synthase
AMC82_RS18625	COG0602	queuosine metabolic process
AMC82_RS18645	COG1780	Probably involved in ribonucleotide reductase function
AMC82_RS18650	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AMC82_RS18660	COG0789	Transcriptional regulator
AMC82_RS18680	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS18690	COG0693	protein deglycase activity
AMC82_RS18700	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS18705	COG0387	Pfam Sodium calcium exchanger
AMC82_RS18740	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS18745	COG1129	ABC transporter
AMC82_RS18755	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS18795	COG0542	response to heat
AMC82_RS18805	COG2890	protein-(glutamine-N5) methyltransferase activity
AMC82_RS18810	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMC82_RS18820	COG0527	aspartate kinase activity
AMC82_RS18825	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMC82_RS18835	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMC82_RS18850	COG2226	methyltransferase
AMC82_RS18865	COG0494	nUDIX hydrolase
AMC82_RS18870	COG0456	acetyltransferase
AMC82_RS18875	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AMC82_RS18880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMC82_RS18885	COG0653	protein targeting
AMC82_RS18900	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMC82_RS18905	COG0667	Aldo Keto reductase
AMC82_RS18910	COG2264	protein methyltransferase activity
AMC82_RS18940	COG4651	solute:proton antiporter activity
AMC82_RS18940	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMC82_RS18970	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMC82_RS18980	COG0300	oxidoreductase activity
AMC82_RS18990	COG2096	Adenosyltransferase
AMC82_RS19000	COG2086	electron transfer activity
AMC82_RS19010	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMC82_RS19015	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMC82_RS19020	COG0165	Argininosuccinate lyase
AMC82_RS19045	COG0037	tRNA processing
AMC82_RS19045	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMC82_RS19055	COG2884	Cell division ATP-binding protein ftsE
AMC82_RS19075	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AMC82_RS19090	COG0287	Prephenate dehydrogenase
AMC82_RS19095	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMC82_RS19100	COG2226	methyltransferase
AMC82_RS19105	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMC82_RS19125	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AMC82_RS19135	COG0563	adenylate kinase activity
AMC82_RS19165	COG4536	flavin adenine dinucleotide binding
AMC82_RS19170	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMC82_RS19175	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AMC82_RS19180	COG4974	Belongs to the 'phage' integrase family
AMC82_RS19185	COG0825	malonyl-CoA metabolic process
AMC82_RS19190	COG3034	peptidoglycan biosynthetic process
AMC82_RS19205	COG0523	cobalamin synthesis protein
AMC82_RS19210	COG1686	Belongs to the peptidase S11 family
AMC82_RS19335	COG0582	viral genome integration into host DNA
AMC82_RS19385	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AMC82_RS19400	COG0395	ABC-type sugar transport system, permease component
AMC82_RS19405	COG1175	transmembrane transport
AMC82_RS19420	COG0156	8-amino-7-oxononanoate synthase activity
AMC82_RS19430	COG0729	surface antigen
AMC82_RS19445	COG0010	Belongs to the arginase family
AMC82_RS19450	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMC82_RS19455	COG0835	chemotaxis
AMC82_RS19475	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AMC82_RS19480	COG3383	formate dehydrogenase (NAD+) activity
AMC82_RS19495	COG0583	DNA-binding transcription factor activity
AMC82_RS19500	COG0640	Transcriptional regulator
AMC82_RS19505	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS19510	COG0789	Transcriptional regulator
AMC82_RS19520	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMC82_RS19530	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AMC82_RS19545	COG2801	Transposase and inactivated derivatives
AMC82_RS19550	COG2963	transposase activity
AMC82_RS19555	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AMC82_RS19565	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMC82_RS19570	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMC82_RS19575	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMC82_RS19580	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMC82_RS19595	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMC82_RS19610	COG4974	Belongs to the 'phage' integrase family
AMC82_RS19620	COG3038	cytochrome b561
AMC82_RS19630	COG1028	Short-chain dehydrogenase reductase Sdr
AMC82_RS19645	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMC82_RS19660	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AMC82_RS19670	COG0045	succinate-CoA ligase (ADP-forming) activity
AMC82_RS19675	COG0039	L-malate dehydrogenase activity
AMC82_RS19680	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AMC82_RS19685	COG2845	Protein of unknown function (DUF459)
AMC82_RS19745	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AMC82_RS19750	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMC82_RS19755	COG0181	hydroxymethylbilane synthase activity
AMC82_RS19780	COG0519	Catalyzes the synthesis of GMP from XMP
AMC82_RS19780	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AMC82_RS19795	COG1872	DUF167
AMC82_RS19800	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMC82_RS19810	COG1217	gtp-binding protein TYPA
AMC82_RS19815	COG0339	signal peptide processing
AMC82_RS19830	COG1511	domain protein
AMC82_RS19830	COG3264	Mechanosensitive ion channel
AMC82_RS19835	COG0137	argininosuccinate synthase activity
AMC82_RS19855	COG4120	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS19865	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AMC82_RS19875	COG1595	DNA-templated transcription, initiation
AMC82_RS19885	COG2154	pterin-4-alpha-carbinolamine dehydratase
AMC82_RS19895	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AMC82_RS19905	COG4181	ATPase activity
AMC82_RS19915	COG0670	Belongs to the BI1 family
AMC82_RS19935	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AMC82_RS19940	COG4133	protoheme IX ABC transporter activity
AMC82_RS19945	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMC82_RS19950	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMC82_RS19970	COG2917	probably involved in intracellular septation
AMC82_RS19975	COG0552	protein localization to endoplasmic reticulum
AMC82_RS19980	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMC82_RS19985	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMC82_RS19995	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMC82_RS20000	COG0287	Prephenate dehydrogenase
AMC82_RS20000	COG1605	Chorismate mutase
AMC82_RS20005	COG0228	four-way junction DNA binding
AMC82_RS20010	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMC82_RS20015	COG0336	Belongs to the RNA methyltransferase TrmD family
AMC82_RS20020	COG0335	large ribosomal subunit rRNA binding
AMC82_RS20030	COG0765	amino acid transport
AMC82_RS20035	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AMC82_RS20045	COG0656	L-ascorbic acid biosynthetic process
AMC82_RS20055	COG0745	RESPONSE REGULATOR receiver
AMC82_RS20070	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AMC82_RS20075	COG1674	ftsk spoiiie
AMC82_RS20080	COG0004	ammonium transporteR
AMC82_RS20085	COG0347	Belongs to the P(II) protein family
AMC82_RS20090	COG1946	Acyl-CoA thioesterase
AMC82_RS20095	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AMC82_RS20100	COG2835	tetraacyldisaccharide 4'-kinase activity
AMC82_RS20170	COG1129	ABC transporter
AMC82_RS20175	COG4211	Belongs to the binding-protein-dependent transport system permease family
AMC82_RS20190	COG0601	transmembrane transport
AMC82_RS20195	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AMC82_RS20200	COG0444	Belongs to the ABC transporter superfamily
AMC82_RS20205	COG4608	Belongs to the ABC transporter superfamily
AMC82_RS20215	COG3459	Glycosyltransferase 36 associated
AMC82_RS20230	COG1132	(ABC) transporter
AMC82_RS20240	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AMC82_RS20245	COG0431	NADPH-dependent FMN reductase
AMC82_RS20250	COG1126	abc transporter atp-binding protein
AMC82_RS20255	COG0765	amino acid transport
AMC82_RS20260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMC82_RS20270	COG0738	Major facilitator superfamily
AMC82_RS20275	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AMC82_RS20280	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMC82_RS20285	COG0142	geranyltranstransferase activity
AMC82_RS20290	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AMC82_RS20305	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AMC82_RS20315	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
AMC82_RS20320	COG0183	Belongs to the thiolase family
AMC82_RS20350	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AMC82_RS20355	COG1329	Transcriptional regulator
AMC82_RS20360	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMC82_RS20370	COG0477	Major facilitator Superfamily
AMC82_RS20385	COG0488	(ABC) transporter
AMC82_RS20390	COG4178	(ABC) transporter
AMC82_RS20395	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AMC82_RS20405	COG2188	Transcriptional regulator
AMC82_RS20410	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMC82_RS20415	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AMC82_RS20420	COG4821	SIS domain
AMC82_RS20425	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS20430	COG1126	abc transporter atp-binding protein
AMC82_RS20435	COG0765	amino acid transport
AMC82_RS20450	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMC82_RS20455	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
AMC82_RS20460	COG1509	lysine 2,3-aminomutase activity
AMC82_RS20465	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMC82_RS20475	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMC82_RS20515	COG5383	Protein conserved in bacteria
AMC82_RS20520	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMC82_RS20525	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS20540	COG3842	ATPase activity
AMC82_RS20560	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AMC82_RS20565	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AMC82_RS20585	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMC82_RS20590	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMC82_RS20595	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AMC82_RS20600	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMC82_RS20605	COG0725	ABC transporter, periplasmic molybdate-binding protein
AMC82_RS20610	COG4149	molybdate abc transporter
AMC82_RS20615	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AMC82_RS20625	COG0799	negative regulation of ribosome biogenesis
AMC82_RS20630	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMC82_RS20640	COG0793	Belongs to the peptidase S41A family
AMC82_RS20650	COG0494	nUDIX hydrolase
AMC82_RS20665	COG0587	DNA-directed DNA polymerase activity
AMC82_RS20705	COG0066	3-isopropylmalate dehydratase activity
AMC82_RS20715	COG0473	3-isopropylmalate dehydrogenase activity
AMC82_RS20720	COG0671	phosphoesterase, PA-phosphatase related
AMC82_RS20735	COG1136	(ABC) transporter
AMC82_RS20745	COG1785	Belongs to the alkaline phosphatase family
AMC82_RS20755	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMC82_RS20765	COG2203	Gaf domain
AMC82_RS20765	COG4251	negative regulation of phosphorylation
AMC82_RS20765	COG5001	Diguanylate cyclase
AMC82_RS20765	COG3706	GGDEF domain
AMC82_RS20770	COG0288	reversible hydration of carbon dioxide
AMC82_RS20780	COG2902	Dehydrogenase
AMC82_RS20785	COG2270	Major facilitator Superfamily
AMC82_RS20790	COG0138	bifunctional purine biosynthesis protein purh
AMC82_RS20800	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMC82_RS20800	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMC82_RS20805	COG0501	Belongs to the peptidase M48B family
AMC82_RS20815	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMC82_RS20840	COG0495	leucyl-tRNA aminoacylation
AMC82_RS20865	COG0357	Ribosomal RNA small subunit methyltransferase G
AMC82_RS20870	COG0445	tRNA wobble uridine modification
AMC82_RS20875	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AMC82_RS20880	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AMC82_RS20885	COG1981	membrane
AMC82_RS21000	COG0133	tryptophan synthase activity
AMC82_RS21110	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AMC82_RS21260	COG1215	transferase activity, transferring glycosyl groups
AMC82_RS21395	COG1012	belongs to the aldehyde dehydrogenase family
AMC82_RS21695	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMC82_RS21700	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMC82_RS21975	COG3454	Phosphonate metabolism
AMC82_RS22330	COG0481	GTPase activity
AMC82_RS22425	COG0667	Aldo Keto reductase
AMC82_RS22560	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMC82_RS22670	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMC82_RS22915	COG0673	inositol 2-dehydrogenase activity
AMC82_RS23190	COG0668	transmembrane transport
AMC82_RS23275	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMC82_RS23415	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMC82_RS23460	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS23460	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS23470	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS23470	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS23475	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS23475	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS23925	COG0481	GTPase activity
AMC82_RS24130	COG0519	Catalyzes the synthesis of GMP from XMP
AMC82_RS24130	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AMC82_RS24400	COG1024	Enoyl-CoA hydratase
AMC82_RS24500	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMC82_RS24545	COG0237	dephospho-CoA kinase activity
AMC82_RS25090	COG0628	permease
AMC82_RS25430	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS25430	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMC82_RS25490	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AMC82_RS25550	COG3626	phosphonate metabolism
AMC82_RS25555	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AMC82_RS25815	COG0481	GTPase activity
AMC82_RS26195	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMC82_RS26360	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AMC82_RS26630	COG2801	Transposase and inactivated derivatives
AMC82_RS26775	COG0642	Histidine kinase
AMC82_RS26850	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AMC82_RS26970	COG2197	response regulator
AMC82_RS27120	COG0246	Mannitol dehydrogenase
AMC82_RS27320	COG4191	Histidine kinase
AMC82_RS28405	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMC82_RS28570	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AMC82_RS29300	COG0534	Mate efflux family protein
AMC82_RS29410	COG1024	Enoyl-CoA hydratase
AMC82_RS29410	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMC82_RS29655	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AMC82_RS29865	COG1706	bacterial-type flagellum-dependent cell motility
AMC82_RS29895	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AMC82_RS30160	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMC82_RS30175	COG2205	protein histidine kinase activity
AMC82_RS30245	COG0747	negative chemotaxis
AMC82_RS30250	COG0747	negative chemotaxis
AMC82_RS30595	COG0196	riboflavin kinase activity
AMC82_RS30750	COG0489	protein tyrosine kinase activity
AMC82_RS30970	COG0277	FAD linked oxidase domain protein
AMC82_RS31015	COG1960	acyl-CoA dehydrogenase activity
AMC82_RS31530	COG0574	Belongs to the PEP-utilizing enzyme family
AMC82_RS31530	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMC82_RS31590	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity