locus-tag class description AMK01_RS00010 PF03618 Kinase/pyrophosphorylase AMK01_RS00015 PF02545 Maf-like protein AMK01_RS00020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMK01_RS00020 PF01488 Shikimate / quinate 5-dehydrogenase AMK01_RS00020 PF08501 Shikimate dehydrogenase substrate binding domain AMK01_RS00025 PF01121 Dephospho-CoA kinase AMK01_RS00030 PF00929 Exonuclease AMK01_RS00035 PF02556 Preprotein translocase subunit SecB AMK01_RS00040 PF04186 FxsA cytoplasmic membrane protein AMK01_RS00050 PF03562 MltA specific insert domain AMK01_RS00050 PF06725 3D domain AMK01_RS00065 PF00204 DNA gyrase B AMK01_RS00065 PF00986 DNA gyrase B subunit, carboxyl terminus AMK01_RS00065 PF01751 Toprim domain AMK01_RS00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS00080 PF13409 Glutathione S-transferase, N-terminal domain AMK01_RS00085 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK01_RS00105 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AMK01_RS00110 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS00115 PF00290 Tryptophan synthase alpha chain AMK01_RS00120 PF01039 Carboxyl transferase domain AMK01_RS00125 PF08245 Mur ligase middle domain AMK01_RS00130 PF00085 Thioredoxin AMK01_RS00135 PF12705 PD-(D/E)XK nuclease superfamily AMK01_RS00135 PF00580 UvrD/REP helicase N-terminal domain AMK01_RS00135 PF13361 UvrD-like helicase C-terminal domain AMK01_RS00140 PF12705 PD-(D/E)XK nuclease superfamily AMK01_RS00145 PF12804 MobA-like NTP transferase domain AMK01_RS00150 PF01636 Phosphotransferase enzyme family AMK01_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS00155 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS00160 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMK01_RS00160 PF05221 S-adenosyl-L-homocysteine hydrolase AMK01_RS00165 PF00381 PTS HPr component phosphorylation site AMK01_RS00170 PF03610 PTS system fructose IIA component AMK01_RS00170 PF03830 PTS system sorbose subfamily IIB component AMK01_RS00180 PF13756 Stimulus-sensing domain AMK01_RS00180 PF13755 Sensor N-terminal transmembrane domain AMK01_RS00180 PF00672 HAMP domain AMK01_RS00180 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS00185 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS00185 PF00072 Response regulator receiver domain AMK01_RS00190 PF01293 Phosphoenolpyruvate carboxykinase AMK01_RS00195 PF00472 RF-1 domain AMK01_RS00200 PF13532 2OG-Fe(II) oxygenase superfamily AMK01_RS00205 PF00485 Phosphoribulokinase / Uridine kinase family AMK01_RS00210 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AMK01_RS00215 PF00977 Histidine biosynthesis protein AMK01_RS00220 PF00977 Histidine biosynthesis protein AMK01_RS00235 PF00117 Glutamine amidotransferase class-I AMK01_RS00245 PF00475 Imidazoleglycerol-phosphate dehydratase AMK01_RS00250 PF00227 Proteasome subunit AMK01_RS00255 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS00255 PF10431 C-terminal, D2-small domain, of ClpB protein AMK01_RS00255 PF07724 AAA domain (Cdc48 subfamily) AMK01_RS00265 PF00067 Cytochrome P450 AMK01_RS00270 PF01274 Malate synthase AMK01_RS00285 PF00072 Response regulator receiver domain AMK01_RS00290 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS00290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS00295 PF00270 DEAD/DEAH box helicase AMK01_RS00295 PF04408 Helicase associated domain (HA2) AMK01_RS00295 PF08482 ATP-dependent helicase C-terminal AMK01_RS00295 PF00271 Helicase conserved C-terminal domain AMK01_RS00300 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMK01_RS00345 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS00345 PF00072 Response regulator receiver domain AMK01_RS00355 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS00360 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS00365 PF00535 Glycosyl transferase family 2 AMK01_RS00365 PF03552 Cellulose synthase AMK01_RS00365 PF07238 PilZ domain AMK01_RS00380 PF13416 Bacterial extracellular solute-binding protein AMK01_RS00385 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS00395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK01_RS00395 PF01842 ACT domain AMK01_RS00395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK01_RS00400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS00400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS00415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS00415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS00420 PF17938 Tetracyclin repressor-like, C-terminal domain AMK01_RS00420 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS00430 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS00440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS00440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS00445 PF00005 ABC transporter AMK01_RS00445 PF03459 TOBE domain AMK01_RS00445 PF17912 MalK OB fold domain AMK01_RS00455 PF16350 FAD dependent oxidoreductase central domain AMK01_RS00455 PF01571 Aminomethyltransferase folate-binding domain AMK01_RS00455 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK01_RS00455 PF01266 FAD dependent oxidoreductase AMK01_RS00460 PF08125 Mannitol dehydrogenase C-terminal domain AMK01_RS00460 PF01232 Mannitol dehydrogenase Rossmann domain AMK01_RS00465 PF02614 Glucuronate isomerase AMK01_RS00470 PF04102 SlyX AMK01_RS00475 PF00171 Aldehyde dehydrogenase family AMK01_RS00480 PF00202 Aminotransferase class-III AMK01_RS00500 PF00575 S1 RNA binding domain AMK01_RS00505 PF02224 Cytidylate kinase AMK01_RS00535 PF01555 DNA methylase AMK01_RS00555 PF00239 Resolvase, N terminal domain AMK01_RS00555 PF02796 Helix-turn-helix domain of resolvase AMK01_RS00635 PF00589 Phage integrase family AMK01_RS00635 PF14659 Phage integrase, N-terminal SAM-like domain AMK01_RS00650 PF06912 Protein of unknown function (DUF1275) AMK01_RS00665 PF03458 UPF0126 domain AMK01_RS00675 PF07977 FabA-like domain AMK01_RS00680 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK01_RS00680 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK01_RS00700 PF05175 Methyltransferase small domain AMK01_RS00700 PF08468 Methyltransferase small domain N-terminal AMK01_RS00705 PF03725 3' exoribonuclease family, domain 2 AMK01_RS00705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AMK01_RS00705 PF00013 KH domain AMK01_RS00705 PF00575 S1 RNA binding domain AMK01_RS00705 PF01138 3' exoribonuclease family, domain 1 AMK01_RS00710 PF00312 Ribosomal protein S15 AMK01_RS00715 PF00561 alpha/beta hydrolase fold AMK01_RS00720 PF16198 tRNA pseudouridylate synthase B C-terminal domain AMK01_RS00720 PF01509 TruB family pseudouridylate synthase (N terminal domain) AMK01_RS00720 PF09157 Pseudouridine synthase II TruB, C-terminal AMK01_RS00725 PF02033 Ribosome-binding factor A AMK01_RS00730 PF11987 Translation-initiation factor 2 AMK01_RS00730 PF04760 Translation initiation factor IF-2, N-terminal region AMK01_RS00730 PF08364 Bacterial translation initiation factor IF-2 associated region AMK01_RS00730 PF00009 Elongation factor Tu GTP binding domain AMK01_RS00740 PF13184 NusA-like KH domain AMK01_RS00740 PF08529 NusA N-terminal domain AMK01_RS00740 PF00575 S1 RNA binding domain AMK01_RS00745 PF17384 RimP C-terminal SH3 domain AMK01_RS00745 PF02576 RimP N-terminal domain AMK01_RS00750 PF05977 Transmembrane secretion effector AMK01_RS00765 PF13662 Toprim domain AMK01_RS00765 PF02132 RecR protein AMK01_RS00770 PF03473 MOSC domain AMK01_RS00775 PF02575 YbaB/EbfC DNA-binding family AMK01_RS00780 PF12169 DNA polymerase III subunits gamma and tau domain III AMK01_RS00780 PF12170 DNA polymerase III tau subunit V interacting with alpha AMK01_RS00780 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AMK01_RS00790 PF01230 HIT domain AMK01_RS00795 PF00293 NUDIX domain AMK01_RS00795 PF09297 NADH pyrophosphatase zinc ribbon domain AMK01_RS00800 PF13280 WYL domain AMK01_RS00800 PF08279 HTH domain AMK01_RS00815 PF00800 Prephenate dehydratase AMK01_RS00815 PF01817 Chorismate mutase type II AMK01_RS00820 PF02348 Cytidylyltransferase AMK01_RS00825 PF00034 Cytochrome c AMK01_RS00830 PF03547 Membrane transport protein AMK01_RS00835 PF00294 pfkB family carbohydrate kinase AMK01_RS00845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK01_RS00845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK01_RS00855 PF00581 Rhodanese-like domain AMK01_RS00855 PF00899 ThiF family AMK01_RS00860 PF02463 RecF/RecN/SMC N terminal domain AMK01_RS00865 PF01381 Helix-turn-helix AMK01_RS00875 PF01556 DnaJ C terminal domain AMK01_RS00875 PF00684 DnaJ central domain AMK01_RS00875 PF00226 DnaJ domain AMK01_RS00880 PF00012 Hsp70 protein AMK01_RS00885 PF00905 Penicillin binding protein transpeptidase domain AMK01_RS00885 PF00912 Transglycosylase AMK01_RS00895 PF07687 Peptidase dimerisation domain AMK01_RS00895 PF01546 Peptidase family M20/M25/M40 AMK01_RS00900 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS00900 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS00900 PF00563 EAL domain AMK01_RS00900 PF13188 PAS domain AMK01_RS00910 PF01367 5'-3' exonuclease, C-terminal SAM fold AMK01_RS00910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AMK01_RS00910 PF00476 DNA polymerase family A AMK01_RS00910 PF01612 3'-5' exonuclease AMK01_RS00915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMK01_RS00915 PF17854 FtsK alpha domain AMK01_RS00915 PF09397 Ftsk gamma domain AMK01_RS00915 PF01580 FtsK/SpoIIIE family AMK01_RS00920 PF04229 GrpB protein AMK01_RS00920 PF13673 Acetyltransferase (GNAT) domain AMK01_RS00925 PF00625 Guanylate kinase AMK01_RS00930 PF07969 Amidohydrolase family AMK01_RS00935 PF06299 Protein of unknown function (DUF1045) AMK01_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS00945 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS00955 PF00005 ABC transporter AMK01_RS00965 PF00005 ABC transporter AMK01_RS00970 PF00005 ABC transporter AMK01_RS00975 PF06007 Phosphonate metabolism protein PhnJ AMK01_RS00980 PF05861 Bacterial phosphonate metabolism protein (PhnI) AMK01_RS00985 PF05845 Bacterial phosphonate metabolism protein (PhnH) AMK01_RS00990 PF06754 Phosphonate metabolism protein PhnG AMK01_RS00995 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS00995 PF07702 UTRA domain AMK01_RS01000 PF00300 Histidine phosphatase superfamily (branch 1) AMK01_RS01005 PF01113 Dihydrodipicolinate reductase, N-terminus AMK01_RS01005 PF05173 Dihydrodipicolinate reductase, C-terminus AMK01_RS01010 PF00005 ABC transporter AMK01_RS01010 PF00664 ABC transporter transmembrane region AMK01_RS01015 PF02685 Glucokinase AMK01_RS01020 PF02142 MGS-like domain AMK01_RS01025 PF03411 Penicillin-insensitive murein endopeptidase AMK01_RS01030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS01035 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS01040 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK01_RS01040 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS01045 PF00005 ABC transporter AMK01_RS01050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK01_RS01060 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AMK01_RS01060 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AMK01_RS01090 PF02608 ABC transporter substrate-binding protein PnrA-like AMK01_RS01095 PF00005 ABC transporter AMK01_RS01100 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS01105 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS01110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK01_RS01115 PF01048 Phosphorylase superfamily AMK01_RS01120 PF01791 DeoC/LacD family aldolase AMK01_RS01125 PF02885 Glycosyl transferase family, helical bundle domain AMK01_RS01125 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AMK01_RS01125 PF00591 Glycosyl transferase family, a/b domain AMK01_RS01140 PF00962 Adenosine/AMP deaminase AMK01_RS01145 PF01676 Metalloenzyme superfamily AMK01_RS01180 PF04972 BON domain AMK01_RS01180 PF00263 Bacterial type II and III secretion system protein AMK01_RS01180 PF13629 Pilus formation protein N terminal region AMK01_RS01195 PF00437 Type II/IV secretion system protein AMK01_RS01210 PF01810 LysE type translocator AMK01_RS01220 PF00883 Cytosol aminopeptidase family, catalytic domain AMK01_RS01220 PF02789 Cytosol aminopeptidase family, N-terminal domain AMK01_RS01230 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AMK01_RS01230 PF00877 NlpC/P60 family AMK01_RS01235 PF01425 Amidase AMK01_RS01240 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK01_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS01245 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS01250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS01255 PF03576 Peptidase family S58 AMK01_RS01265 PF00202 Aminotransferase class-III AMK01_RS01270 PF00551 Formyl transferase AMK01_RS01275 PF01757 Acyltransferase family AMK01_RS01285 PF00150 Cellulase (glycosyl hydrolase family 5) AMK01_RS01300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS01305 PF00535 Glycosyl transferase family 2 AMK01_RS01310 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AMK01_RS01320 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS01325 PF00483 Nucleotidyl transferase AMK01_RS01335 PF03102 NeuB family AMK01_RS01335 PF08666 SAF domain AMK01_RS01340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK01_RS01340 PF00205 Thiamine pyrophosphate enzyme, central domain AMK01_RS01340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK01_RS01345 PF07977 FabA-like domain AMK01_RS01365 PF00501 AMP-binding enzyme AMK01_RS01365 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS01415 PF00009 Elongation factor Tu GTP binding domain AMK01_RS01415 PF03144 Elongation factor Tu domain 2 AMK01_RS01415 PF00679 Elongation factor G C-terminus AMK01_RS01415 PF06421 GTP-binding protein LepA C-terminus AMK01_RS01425 PF07883 Cupin domain AMK01_RS01425 PF01381 Helix-turn-helix AMK01_RS01440 PF00850 Histone deacetylase domain AMK01_RS01445 PF02631 RecX family AMK01_RS01450 PF00892 EamA-like transporter family AMK01_RS01475 PF12697 Alpha/beta hydrolase family AMK01_RS01480 PF05198 Translation initiation factor IF-3, N-terminal domain AMK01_RS01480 PF00707 Translation initiation factor IF-3, C-terminal domain AMK01_RS01485 PF01632 Ribosomal protein L35 AMK01_RS01490 PF00453 Ribosomal protein L20 AMK01_RS01495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AMK01_RS01495 PF01409 tRNA synthetases class II core domain (F) AMK01_RS01500 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMK01_RS01500 PF03483 B3/4 domain AMK01_RS01500 PF03484 tRNA synthetase B5 domain AMK01_RS01500 PF03147 Ferredoxin-fold anticodon binding domain AMK01_RS01500 PF01588 Putative tRNA binding domain AMK01_RS01510 PF00248 Aldo/keto reductase family AMK01_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS01515 PF03466 LysR substrate binding domain AMK01_RS01520 PF05974 Domain of unknown function (DUF892) AMK01_RS01530 PF13673 Acetyltransferase (GNAT) domain AMK01_RS01535 PF00248 Aldo/keto reductase family AMK01_RS01540 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS01540 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS01565 PF02601 Exonuclease VII, large subunit AMK01_RS01565 PF13742 OB-fold nucleic acid binding domain AMK01_RS01570 PF02525 Flavodoxin-like fold AMK01_RS01575 PF01047 MarR family AMK01_RS01580 PF00892 EamA-like transporter family AMK01_RS01585 PF02073 Thermophilic metalloprotease (M29) AMK01_RS01590 PF13417 Glutathione S-transferase, N-terminal domain AMK01_RS01590 PF14497 Glutathione S-transferase, C-terminal domain AMK01_RS01600 PF04073 Aminoacyl-tRNA editing domain AMK01_RS01605 PF03960 ArsC family AMK01_RS01615 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK01_RS01615 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMK01_RS01620 PF00106 short chain dehydrogenase AMK01_RS01625 PF00106 short chain dehydrogenase AMK01_RS01635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS01635 PF03466 LysR substrate binding domain AMK01_RS01640 PF12833 Helix-turn-helix domain AMK01_RS01645 PF01161 Phosphatidylethanolamine-binding protein AMK01_RS01655 PF01872 RibD C-terminal domain AMK01_RS01670 PF00117 Glutamine amidotransferase class-I AMK01_RS01670 PF00958 GMP synthase C terminal domain AMK01_RS01710 PF01029 NusB family AMK01_RS01710 PF01189 16S rRNA methyltransferase RsmB/F AMK01_RS01715 PF03330 Lytic transglycolase AMK01_RS01725 PF08331 Domain of unknown function (DUF1730) AMK01_RS01730 PF00043 Glutathione S-transferase, C-terminal domain AMK01_RS01730 PF13417 Glutathione S-transferase, N-terminal domain AMK01_RS01735 PF02673 Bacitracin resistance protein BacA AMK01_RS01755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AMK01_RS01765 PF13649 Methyltransferase domain AMK01_RS01775 PF02768 DNA polymerase III beta subunit, C-terminal domain AMK01_RS01775 PF00712 DNA polymerase III beta subunit, N-terminal domain AMK01_RS01775 PF02767 DNA polymerase III beta subunit, central domain AMK01_RS01780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK01_RS01785 PF02021 Uncharacterised protein family UPF0102 AMK01_RS01795 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AMK01_RS01795 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AMK01_RS01800 PF01078 Magnesium chelatase, subunit ChlI AMK01_RS01800 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMK01_RS01810 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS01815 PF01810 LysE type translocator AMK01_RS01820 PF00892 EamA-like transporter family AMK01_RS01825 PF01037 Lrp/AsnC ligand binding domain AMK01_RS01835 PF00692 dUTPase AMK01_RS01840 PF16658 Class II release factor RF3, C-terminal domain AMK01_RS01840 PF00009 Elongation factor Tu GTP binding domain AMK01_RS01840 PF03144 Elongation factor Tu domain 2 AMK01_RS01845 PF00529 HlyD membrane-fusion protein of T1SS AMK01_RS01850 PF00664 ABC transporter transmembrane region AMK01_RS01850 PF00005 ABC transporter AMK01_RS01870 PF07690 Major Facilitator Superfamily AMK01_RS01885 PF02441 Flavoprotein AMK01_RS01885 PF04127 DNA / pantothenate metabolism flavoprotein AMK01_RS01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS01895 PF03466 LysR substrate binding domain AMK01_RS01900 PF07690 Major Facilitator Superfamily AMK01_RS01905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS01910 PF01175 Urocanase Rossmann-like domain AMK01_RS01910 PF17392 Urocanase C-terminal domain AMK01_RS01910 PF17391 Urocanase N-terminal domain AMK01_RS01925 PF01546 Peptidase family M20/M25/M40 AMK01_RS01930 PF01979 Amidohydrolase family AMK01_RS01935 PF00221 Aromatic amino acid lyase AMK01_RS01940 PF03109 ABC1 family AMK01_RS01945 PF01209 ubiE/COQ5 methyltransferase family AMK01_RS01950 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AMK01_RS01950 PF06827 Zinc finger found in FPG and IleRS AMK01_RS01950 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AMK01_RS01955 PF00378 Enoyl-CoA hydratase/isomerase AMK01_RS01960 PF01649 Ribosomal protein S20 AMK01_RS01965 PF00308 Bacterial dnaA protein AMK01_RS01965 PF08299 Bacterial dnaA protein helix-turn-helix AMK01_RS01965 PF11638 DnaA N-terminal domain AMK01_RS01975 PF06969 HemN C-terminal domain AMK01_RS01975 PF04055 Radical SAM superfamily AMK01_RS01980 PF01725 Ham1 family AMK01_RS01990 PF01138 3' exoribonuclease family, domain 1 AMK01_RS01990 PF03725 3' exoribonuclease family, domain 2 AMK01_RS01995 PF01628 HrcA protein C terminal domain AMK01_RS02000 PF01025 GrpE AMK01_RS02005 PF01156 Inosine-uridine preferring nucleoside hydrolase AMK01_RS02010 PF00011 Hsp20/alpha crystallin family AMK01_RS02035 PF02390 Putative methyltransferase AMK01_RS02040 PF00438 S-adenosylmethionine synthetase, N-terminal domain AMK01_RS02040 PF02772 S-adenosylmethionine synthetase, central domain AMK01_RS02040 PF02773 S-adenosylmethionine synthetase, C-terminal domain AMK01_RS02050 PF01381 Helix-turn-helix AMK01_RS02055 PF00795 Carbon-nitrogen hydrolase AMK01_RS02060 PF00571 CBS domain AMK01_RS02060 PF03471 Transporter associated domain AMK01_RS02065 PF02130 Uncharacterized protein family UPF0054 AMK01_RS02070 PF02562 PhoH-like protein AMK01_RS02075 PF04055 Radical SAM superfamily AMK01_RS02075 PF00919 Uncharacterized protein family UPF0004 AMK01_RS02075 PF01938 TRAM domain AMK01_RS02085 PF01475 Ferric uptake regulator family AMK01_RS02095 PF00814 Glycoprotease family AMK01_RS02100 PF01106 NifU-like domain AMK01_RS02110 PF00579 tRNA synthetases class I (W and Y) AMK01_RS02125 PF03023 Lipid II flippase MurJ AMK01_RS02130 PF01909 Nucleotidyltransferase domain AMK01_RS02130 PF01966 HD domain AMK01_RS02130 PF01842 ACT domain AMK01_RS02130 PF08335 GlnD PII-uridylyltransferase AMK01_RS02140 PF05192 MutS domain III AMK01_RS02140 PF05190 MutS family domain IV AMK01_RS02140 PF01624 MutS domain I AMK01_RS02140 PF00488 MutS domain V AMK01_RS02140 PF05188 MutS domain II AMK01_RS02145 PF03949 Malic enzyme, NAD binding domain AMK01_RS02145 PF00390 Malic enzyme, N-terminal domain AMK01_RS02145 PF01515 Phosphate acetyl/butaryl transferase AMK01_RS02155 PF00072 Response regulator receiver domain AMK01_RS02155 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS02155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK01_RS02155 PF00672 HAMP domain AMK01_RS02155 PF01627 Hpt domain AMK01_RS02160 PF01252 Signal peptidase (SPase) II AMK01_RS02165 PF00588 SpoU rRNA Methylase family AMK01_RS02170 PF01170 Putative RNA methylase family UPF0020 AMK01_RS02170 PF02926 THUMP domain AMK01_RS02170 PF10672 S-adenosylmethionine-dependent methyltransferase AMK01_RS02195 PF00216 Bacterial DNA-binding protein AMK01_RS02200 PF01343 Peptidase family S49 AMK01_RS02200 PF06965 Na+/H+ antiporter 1 AMK01_RS02210 PF03968 OstA-like protein AMK01_RS02215 PF00005 ABC transporter AMK01_RS02220 PF00309 Sigma-54 factor, Activator interacting domain (AID) AMK01_RS02220 PF04552 Sigma-54, DNA binding domain AMK01_RS02220 PF04963 Sigma-54 factor, core binding domain AMK01_RS02225 PF00892 EamA-like transporter family AMK01_RS02230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AMK01_RS02230 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AMK01_RS02235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AMK01_RS02240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS02240 PF00672 HAMP domain AMK01_RS02245 PF00294 pfkB family carbohydrate kinase AMK01_RS02255 PF00672 HAMP domain AMK01_RS02255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS02260 PF01327 Polypeptide deformylase AMK01_RS02270 PF01850 PIN domain AMK01_RS02275 PF00551 Formyl transferase AMK01_RS02275 PF02911 Formyl transferase, C-terminal domain AMK01_RS02280 PF01416 tRNA pseudouridine synthase AMK01_RS02290 PF01546 Peptidase family M20/M25/M40 AMK01_RS02290 PF07687 Peptidase dimerisation domain AMK01_RS02295 PF14602 Hexapeptide repeat of succinyl-transferase AMK01_RS02295 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS02295 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AMK01_RS02315 PF12833 Helix-turn-helix domain AMK01_RS02315 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMK01_RS02315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK01_RS02315 PF02805 Metal binding domain of Ada AMK01_RS02325 PF01070 FMN-dependent dehydrogenase AMK01_RS02340 PF00696 Amino acid kinase family AMK01_RS02345 PF10668 Phage terminase small subunit AMK01_RS02355 PF02469 Fasciclin domain AMK01_RS02360 PF01926 50S ribosome-binding GTPase AMK01_RS02365 PF14849 YidC periplasmic domain AMK01_RS02365 PF02096 60Kd inner membrane protein AMK01_RS02370 PF00825 Ribonuclease P AMK01_RS02375 PF00468 Ribosomal protein L34 AMK01_RS02380 PF00672 HAMP domain AMK01_RS02380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS02385 PF00989 PAS fold AMK01_RS02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS02385 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS02430 PF00398 Ribosomal RNA adenine dimethylase AMK01_RS02435 PF00248 Aldo/keto reductase family AMK01_RS02445 PF01266 FAD dependent oxidoreductase AMK01_RS02450 PF05544 Proline racemase AMK01_RS02470 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS02475 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS02490 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS02490 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS02490 PF13188 PAS domain AMK01_RS02490 PF00563 EAL domain AMK01_RS02495 PF00107 Zinc-binding dehydrogenase AMK01_RS02495 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS02505 PF05067 Manganese containing catalase AMK01_RS02515 PF00480 ROK family AMK01_RS02520 PF13407 Periplasmic binding protein domain AMK01_RS02525 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS02530 PF00005 ABC transporter AMK01_RS02535 PF00485 Phosphoribulokinase / Uridine kinase family AMK01_RS02540 PF01979 Amidohydrolase family AMK01_RS02545 PF17151 Periplasmic sensor domain AMK01_RS02545 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS02555 PF08361 MAATS-type transcriptional repressor, C-terminal region AMK01_RS02555 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS02560 PF00156 Phosphoribosyl transferase domain AMK01_RS02565 PF00294 pfkB family carbohydrate kinase AMK01_RS02570 PF00982 Glycosyltransferase family 20 AMK01_RS02575 PF00342 Phosphoglucose isomerase AMK01_RS02580 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS02580 PF00501 AMP-binding enzyme AMK01_RS02595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS02600 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS02605 PF00005 ABC transporter AMK01_RS02610 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS02615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMK01_RS02620 PF03466 LysR substrate binding domain AMK01_RS02620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS02625 PF03932 CutC family AMK01_RS02630 PF00107 Zinc-binding dehydrogenase AMK01_RS02630 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS02635 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS02640 PF00005 ABC transporter AMK01_RS02650 PF05025 RbsD / FucU transport protein family AMK01_RS02655 PF00248 Aldo/keto reductase family AMK01_RS02660 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AMK01_RS02660 PF08666 SAF domain AMK01_RS02665 PF07729 FCD domain AMK01_RS02665 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS02670 PF06472 ABC transporter transmembrane region 2 AMK01_RS02670 PF00005 ABC transporter AMK01_RS02675 PF07690 Major Facilitator Superfamily AMK01_RS02685 PF01757 Acyltransferase family AMK01_RS02705 PF03976 Polyphosphate kinase 2 (PPK2) AMK01_RS02710 PF00989 PAS fold AMK01_RS02710 PF16736 Single Cache-like AMK01_RS02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS02710 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS02715 PF12849 PBP superfamily domain AMK01_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS02725 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS02730 PF00005 ABC transporter AMK01_RS02735 PF01895 PhoU domain AMK01_RS02740 PF00072 Response regulator receiver domain AMK01_RS02740 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS02750 PF00202 Aminotransferase class-III AMK01_RS02755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMK01_RS02755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMK01_RS02760 PF01430 Hsp33 protein AMK01_RS02765 PF04379 ApaG domain AMK01_RS02770 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK01_RS02775 PF00692 dUTPase AMK01_RS02795 PF00873 AcrB/AcrD/AcrF family AMK01_RS02800 PF00106 short chain dehydrogenase AMK01_RS02815 PF00672 HAMP domain AMK01_RS02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS02825 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS02840 PF01726 LexA DNA binding domain AMK01_RS02840 PF00717 Peptidase S24-like AMK01_RS02845 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS02845 PF00072 Response regulator receiver domain AMK01_RS02860 PF01180 Dihydroorotate dehydrogenase AMK01_RS02865 PF01554 MatE AMK01_RS02890 PF02627 Carboxymuconolactone decarboxylase family AMK01_RS02895 PF02082 Transcriptional regulator AMK01_RS02905 PF00271 Helicase conserved C-terminal domain AMK01_RS02905 PF08494 DEAD/H associated AMK01_RS02905 PF00270 DEAD/DEAH box helicase AMK01_RS02925 PF08360 QacR-like protein, C-terminal region AMK01_RS02925 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS02940 PF01925 Sulfite exporter TauE/SafE AMK01_RS02955 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK01_RS02955 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMK01_RS02955 PF02770 Acyl-CoA dehydrogenase, middle domain AMK01_RS02955 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK01_RS02960 PF02803 Thiolase, C-terminal domain AMK01_RS02960 PF00108 Thiolase, N-terminal domain AMK01_RS02965 PF00378 Enoyl-CoA hydratase/isomerase AMK01_RS02965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMK01_RS02965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMK01_RS02970 PF00313 'Cold-shock' DNA-binding domain AMK01_RS03000 PF00072 Response regulator receiver domain AMK01_RS03000 PF00672 HAMP domain AMK01_RS03000 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS03000 PF01627 Hpt domain AMK01_RS03000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS03005 PF01741 Large-conductance mechanosensitive channel, MscL AMK01_RS03010 PF00155 Aminotransferase class I and II AMK01_RS03015 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS03020 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS03020 PF08447 PAS fold AMK01_RS03020 PF00563 EAL domain AMK01_RS03020 PF08448 PAS fold AMK01_RS03030 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMK01_RS03030 PF00753 Metallo-beta-lactamase superfamily AMK01_RS03035 PF13361 UvrD-like helicase C-terminal domain AMK01_RS03035 PF00580 UvrD/REP helicase N-terminal domain AMK01_RS03075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMK01_RS03085 PF00815 Histidinol dehydrogenase AMK01_RS03090 PF06793 Uncharacterised protein family (UPF0262) AMK01_RS03095 PF01451 Low molecular weight phosphotyrosine protein phosphatase AMK01_RS03100 PF01176 Translation initiation factor 1A / IF-1 AMK01_RS03105 PF02545 Maf-like protein AMK01_RS03110 PF03884 DNA gyrase inhibitor YacG AMK01_RS03125 PF06965 Na+/H+ antiporter 1 AMK01_RS03135 PF00797 N-acetyltransferase AMK01_RS03160 PF05114 Protein of unknown function (DUF692) AMK01_RS03175 PF00107 Zinc-binding dehydrogenase AMK01_RS03175 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS03185 PF03600 Citrate transporter AMK01_RS03200 PF01042 Endoribonuclease L-PSP AMK01_RS03205 PF00701 Dihydrodipicolinate synthetase family AMK01_RS03210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS03210 PF00005 ABC transporter AMK01_RS03215 PF00005 ABC transporter AMK01_RS03215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS03220 PF00701 Dihydrodipicolinate synthetase family AMK01_RS03225 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03230 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS03240 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS03240 PF07729 FCD domain AMK01_RS03245 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS03250 PF13407 Periplasmic binding protein domain AMK01_RS03255 PF00005 ABC transporter AMK01_RS03260 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS03270 PF02735 Ku70/Ku80 beta-barrel domain AMK01_RS03275 PF01068 ATP dependent DNA ligase domain AMK01_RS03275 PF13298 DNA polymerase Ligase (LigD) AMK01_RS03275 PF04679 ATP dependent DNA ligase C terminal region AMK01_RS03280 PF02735 Ku70/Ku80 beta-barrel domain AMK01_RS03310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS03315 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS03315 PF01590 GAF domain AMK01_RS03315 PF00360 Phytochrome region AMK01_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS03315 PF08446 PAS fold AMK01_RS03320 PF00072 Response regulator receiver domain AMK01_RS03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS03325 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS03325 PF08446 PAS fold AMK01_RS03325 PF00360 Phytochrome region AMK01_RS03325 PF01590 GAF domain AMK01_RS03335 PF03472 Autoinducer binding domain AMK01_RS03335 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS03350 PF07549 SecD/SecF GG Motif AMK01_RS03350 PF02355 Protein export membrane protein AMK01_RS03360 PF02254 TrkA-N domain AMK01_RS03360 PF00999 Sodium/hydrogen exchanger family AMK01_RS03370 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMK01_RS03375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS03385 PF00072 Response regulator receiver domain AMK01_RS03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS03390 PF01584 CheW-like domain AMK01_RS03390 PF02895 Signal transducing histidine kinase, homodimeric domain AMK01_RS03390 PF01627 Hpt domain AMK01_RS03395 PF01584 CheW-like domain AMK01_RS03400 PF03705 CheR methyltransferase, all-alpha domain AMK01_RS03400 PF01739 CheR methyltransferase, SAM binding domain AMK01_RS03405 PF01339 CheB methylesterase AMK01_RS03405 PF00072 Response regulator receiver domain AMK01_RS03410 PF00072 Response regulator receiver domain AMK01_RS03415 PF03975 CheD chemotactic sensory transduction AMK01_RS03425 PF08345 Flagellar M-ring protein C-terminal AMK01_RS03425 PF01514 Secretory protein of YscJ/FliF family AMK01_RS03430 PF03472 Autoinducer binding domain AMK01_RS03430 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS03445 PF01312 FlhB HrpN YscU SpaS Family AMK01_RS03450 PF14842 FliG N-terminal domain AMK01_RS03450 PF14841 FliG middle domain AMK01_RS03450 PF01706 FliG C-terminal domain AMK01_RS03455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMK01_RS03460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AMK01_RS03465 PF01618 MotA/TolQ/ExbB proton channel family AMK01_RS03470 PF00460 Flagella basal body rod protein AMK01_RS03470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK01_RS03475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK01_RS03475 PF18269 T3SS EscN ATPase C-terminal domain AMK01_RS03485 PF00460 Flagella basal body rod protein AMK01_RS03490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK01_RS03495 PF02049 Flagellar hook-basal body complex protein FliE AMK01_RS03500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK01_RS03500 PF00460 Flagella basal body rod protein AMK01_RS03505 PF13144 Chaperone for flagella basal body P-ring formation AMK01_RS03510 PF02119 Flagellar P-ring protein AMK01_RS03520 PF02107 Flagellar L-ring protein AMK01_RS03530 PF00813 FliP family AMK01_RS03540 PF01037 Lrp/AsnC ligand binding domain AMK01_RS03550 PF00700 Bacterial flagellin C-terminal helical region AMK01_RS03550 PF00669 Bacterial flagellin N-terminal helical region AMK01_RS03555 PF00700 Bacterial flagellin C-terminal helical region AMK01_RS03555 PF00669 Bacterial flagellin N-terminal helical region AMK01_RS03560 PF00700 Bacterial flagellin C-terminal helical region AMK01_RS03560 PF00669 Bacterial flagellin N-terminal helical region AMK01_RS03565 PF00669 Bacterial flagellin N-terminal helical region AMK01_RS03565 PF00700 Bacterial flagellin C-terminal helical region AMK01_RS03575 PF13677 Membrane MotB of proton-channel complex MotA/MotB AMK01_RS03575 PF00691 OmpA family AMK01_RS03585 PF02120 Flagellar hook-length control protein FliK AMK01_RS03595 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS03600 PF07559 Flagellar basal body protein FlaE AMK01_RS03600 PF00460 Flagella basal body rod protein AMK01_RS03600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK01_RS03605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK01_RS03605 PF00460 Flagella basal body rod protein AMK01_RS03620 PF07378 Flagellar protein FlbT AMK01_RS03630 PF01313 Bacterial export proteins, family 3 AMK01_RS03635 PF00771 FHIPEP family AMK01_RS03640 PF01311 Bacterial export proteins, family 1 AMK01_RS03665 PF03808 Glycosyl transferase WecB/TagA/CpsF family AMK01_RS03675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMK01_RS03675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMK01_RS03680 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS03685 PF01547 Bacterial extracellular solute-binding protein AMK01_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03695 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03700 PF00128 Alpha amylase, catalytic domain AMK01_RS03705 PF00005 ABC transporter AMK01_RS03705 PF03459 TOBE domain AMK01_RS03705 PF17912 MalK OB fold domain AMK01_RS03715 PF00920 Dehydratase family AMK01_RS03720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AMK01_RS03725 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMK01_RS03725 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMK01_RS03730 PF01266 FAD dependent oxidoreductase AMK01_RS03735 PF00120 Glutamine synthetase, catalytic domain AMK01_RS03735 PF03951 Glutamine synthetase, beta-Grasp domain AMK01_RS03745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS03745 PF00672 HAMP domain AMK01_RS03750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS03750 PF00672 HAMP domain AMK01_RS03770 PF00463 Isocitrate lyase family AMK01_RS03775 PF06114 IrrE N-terminal-like domain AMK01_RS03775 PF09856 Predicted transcriptional regulator (DUF2083) AMK01_RS03775 PF01381 Helix-turn-helix AMK01_RS03780 PF13416 Bacterial extracellular solute-binding protein AMK01_RS03785 PF08402 TOBE domain AMK01_RS03785 PF00005 ABC transporter AMK01_RS03790 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03795 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03805 PF00501 AMP-binding enzyme AMK01_RS03805 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS03810 PF13188 PAS domain AMK01_RS03810 PF00989 PAS fold AMK01_RS03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS03810 PF13426 PAS domain AMK01_RS03810 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS03825 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AMK01_RS03825 PF08548 Peptidase M10 serralysin C terminal AMK01_RS03845 PF00171 Aldehyde dehydrogenase family AMK01_RS03850 PF02082 Transcriptional regulator AMK01_RS03855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS03860 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03865 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS03865 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK01_RS03870 PF00005 ABC transporter AMK01_RS03870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS03875 PF00005 ABC transporter AMK01_RS03875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS03885 PF01266 FAD dependent oxidoreductase AMK01_RS03890 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AMK01_RS03895 PF00195 Chalcone and stilbene synthases, N-terminal domain AMK01_RS03895 PF02797 Chalcone and stilbene synthases, C-terminal domain AMK01_RS03905 PF04542 Sigma-70 region 2 AMK01_RS03905 PF08281 Sigma-70, region 4 AMK01_RS03915 PF00535 Glycosyl transferase family 2 AMK01_RS03920 PF00483 Nucleotidyl transferase AMK01_RS03930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS03940 PF00005 ABC transporter AMK01_RS03940 PF14524 Wzt C-terminal domain AMK01_RS03945 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS03950 PF00483 Nucleotidyl transferase AMK01_RS03955 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS03960 PF06463 Molybdenum Cofactor Synthesis C AMK01_RS03960 PF04055 Radical SAM superfamily AMK01_RS03965 PF08666 SAF domain AMK01_RS03965 PF03102 NeuB family AMK01_RS03970 PF02348 Cytidylyltransferase AMK01_RS03985 PF02585 GlcNAc-PI de-N-acetylase AMK01_RS04000 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS04015 PF03407 Nucleotide-diphospho-sugar transferase AMK01_RS04020 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS04025 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS04030 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS04035 PF00891 O-methyltransferase domain AMK01_RS04045 PF02541 Ppx/GppA phosphatase family AMK01_RS04050 PF01728 FtsJ-like methyltransferase AMK01_RS04060 PF07690 Major Facilitator Superfamily AMK01_RS04070 PF00478 IMP dehydrogenase / GMP reductase domain AMK01_RS04070 PF00571 CBS domain AMK01_RS04090 PF03466 LysR substrate binding domain AMK01_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS04105 PF04107 Glutamate-cysteine ligase family 2(GCS2) AMK01_RS04110 PF04452 RNA methyltransferase AMK01_RS04115 PF01384 Phosphate transporter family AMK01_RS04125 PF03466 LysR substrate binding domain AMK01_RS04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS04130 PF01565 FAD binding domain AMK01_RS04130 PF02913 FAD linked oxidases, C-terminal domain AMK01_RS04135 PF01565 FAD binding domain AMK01_RS04140 PF13183 4Fe-4S dicluster domain AMK01_RS04140 PF02754 Cysteine-rich domain AMK01_RS04155 PF01476 LysM domain AMK01_RS04155 PF17969 L,D-transpeptidase C-terminal domain AMK01_RS04155 PF03734 L,D-transpeptidase catalytic domain AMK01_RS04160 PF03734 L,D-transpeptidase catalytic domain AMK01_RS04160 PF17969 L,D-transpeptidase C-terminal domain AMK01_RS04165 PF03352 Methyladenine glycosylase AMK01_RS04180 PF00248 Aldo/keto reductase family AMK01_RS04200 PF03129 Anticodon binding domain AMK01_RS04200 PF13393 Histidyl-tRNA synthetase AMK01_RS04205 PF13393 Histidyl-tRNA synthetase AMK01_RS04210 PF01634 ATP phosphoribosyltransferase AMK01_RS04215 PF07681 DoxX AMK01_RS04220 PF02798 Glutathione S-transferase, N-terminal domain AMK01_RS04220 PF00043 Glutathione S-transferase, C-terminal domain AMK01_RS04230 PF00118 TCP-1/cpn60 chaperonin family AMK01_RS04235 PF00166 Chaperonin 10 Kd subunit AMK01_RS04245 PF01687 Riboflavin kinase AMK01_RS04245 PF06574 FAD synthetase AMK01_RS04250 PF00133 tRNA synthetases class I (I, L, M and V) AMK01_RS04250 PF08264 Anticodon-binding domain of tRNA AMK01_RS04260 PF14437 MafB19-like deaminase AMK01_RS04265 PF00849 RNA pseudouridylate synthase AMK01_RS04265 PF01479 S4 domain AMK01_RS04275 PF01734 Patatin-like phospholipase AMK01_RS04280 PF01878 EVE domain AMK01_RS04290 PF02254 TrkA-N domain AMK01_RS04290 PF00999 Sodium/hydrogen exchanger family AMK01_RS04295 PF01523 Putative modulator of DNA gyrase AMK01_RS04300 PF00459 Inositol monophosphatase family AMK01_RS04310 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AMK01_RS04320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AMK01_RS04330 PF01119 DNA mismatch repair protein, C-terminal domain AMK01_RS04330 PF08676 MutL C terminal dimerisation domain AMK01_RS04335 PF00072 Response regulator receiver domain AMK01_RS04335 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS04340 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS04340 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS04340 PF00563 EAL domain AMK01_RS04340 PF13188 PAS domain AMK01_RS04350 PF08450 SMP-30/Gluconolactonase/LRE-like region AMK01_RS04355 PF01081 KDPG and KHG aldolase AMK01_RS04360 PF05035 2-keto-3-deoxy-galactonokinase AMK01_RS04370 PF01614 Bacterial transcriptional regulator AMK01_RS04370 PF09339 IclR helix-turn-helix domain AMK01_RS04375 PF03472 Autoinducer binding domain AMK01_RS04375 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS04380 PF10609 NUBPL iron-transfer P-loop NTPase AMK01_RS04380 PF01883 Iron-sulfur cluster assembly protein AMK01_RS04385 PF01544 CorA-like Mg2+ transporter protein AMK01_RS04390 PF02705 K+ potassium transporter AMK01_RS04400 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter AMK01_RS04405 PF00119 ATP synthase A chain AMK01_RS04410 PF00137 ATP synthase subunit C AMK01_RS04415 PF00430 ATP synthase B/B' CF(0) AMK01_RS04420 PF00430 ATP synthase B/B' CF(0) AMK01_RS04425 PF01351 Ribonuclease HII AMK01_RS04445 PF00994 Probable molybdopterin binding domain AMK01_RS04450 PF08544 GHMP kinases C terminal AMK01_RS04450 PF00288 GHMP kinases N terminal domain AMK01_RS04460 PF00348 Polyprenyl synthetase AMK01_RS04475 PF01566 Natural resistance-associated macrophage protein AMK01_RS04480 PF01343 Peptidase family S49 AMK01_RS04480 PF06965 Na+/H+ antiporter 1 AMK01_RS04490 PF02091 Glycyl-tRNA synthetase alpha subunit AMK01_RS04495 PF01202 Shikimate kinase AMK01_RS04500 PF04011 LemA family AMK01_RS04505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AMK01_RS04515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMK01_RS04515 PF02843 Phosphoribosylglycinamide synthetase, C domain AMK01_RS04515 PF02844 Phosphoribosylglycinamide synthetase, N domain AMK01_RS04525 PF08269 Cache domain AMK01_RS04525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS04530 PF04463 Protein of unknown function (DUF523) AMK01_RS04535 PF05746 DALR anticodon binding domain AMK01_RS04535 PF02092 Glycyl-tRNA synthetase beta subunit AMK01_RS04540 PF16921 Tex protein YqgF-like domain AMK01_RS04540 PF09371 Tex-like protein N-terminal domain AMK01_RS04540 PF17674 HHH domain AMK01_RS04540 PF00575 S1 RNA binding domain AMK01_RS04550 PF00300 Histidine phosphatase superfamily (branch 1) AMK01_RS04560 PF01040 UbiA prenyltransferase family AMK01_RS04575 PF02913 FAD linked oxidases, C-terminal domain AMK01_RS04575 PF01565 FAD binding domain AMK01_RS04580 PF03481 Putative GTP-binding controlling metal-binding AMK01_RS04580 PF01300 Telomere recombination AMK01_RS04590 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AMK01_RS04590 PF00355 Rieske [2Fe-2S] domain AMK01_RS04595 PF07886 BA14K-like protein AMK01_RS04610 PF02770 Acyl-CoA dehydrogenase, middle domain AMK01_RS04610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK01_RS04610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK01_RS04610 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMK01_RS04620 PF12706 Beta-lactamase superfamily domain AMK01_RS04625 PF00106 short chain dehydrogenase AMK01_RS04630 PF01638 HxlR-like helix-turn-helix AMK01_RS04635 PF05958 tRNA (Uracil-5-)-methyltransferase AMK01_RS04640 PF01728 FtsJ-like methyltransferase AMK01_RS04640 PF01479 S4 domain AMK01_RS04645 PF00672 HAMP domain AMK01_RS04645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS04650 PF02779 Transketolase, pyrimidine binding domain AMK01_RS04650 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AMK01_RS04650 PF02780 Transketolase, C-terminal domain AMK01_RS04660 PF05726 Pirin C-terminal cupin domain AMK01_RS04660 PF02678 Pirin AMK01_RS04670 PF02609 Exonuclease VII small subunit AMK01_RS04675 PF00850 Histone deacetylase domain AMK01_RS04685 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS04685 PF07729 FCD domain AMK01_RS04695 PF00501 AMP-binding enzyme AMK01_RS04695 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS04705 PF06339 Ectoine synthase AMK01_RS04710 PF03466 LysR substrate binding domain AMK01_RS04710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS04720 PF01757 Acyltransferase family AMK01_RS04725 PF02632 BioY family AMK01_RS04730 PF02361 Cobalt transport protein AMK01_RS04735 PF00005 ABC transporter AMK01_RS04740 PF06224 Winged helix DNA-binding domain AMK01_RS04745 PF00925 GTP cyclohydrolase II AMK01_RS04745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AMK01_RS04750 PF01264 Chorismate synthase AMK01_RS04770 PF00300 Histidine phosphatase superfamily (branch 1) AMK01_RS04780 PF01556 DnaJ C terminal domain AMK01_RS04780 PF00226 DnaJ domain AMK01_RS04780 PF00684 DnaJ central domain AMK01_RS04790 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AMK01_RS04790 PF01243 Pyridoxamine 5'-phosphate oxidase AMK01_RS04800 PF07943 Penicillin-binding protein 5, C-terminal domain AMK01_RS04800 PF00768 D-alanyl-D-alanine carboxypeptidase AMK01_RS04810 PF01384 Phosphate transporter family AMK01_RS04815 PF01865 Protein of unknown function DUF47 AMK01_RS04825 PF00583 Acetyltransferase (GNAT) family AMK01_RS04830 PF01523 Putative modulator of DNA gyrase AMK01_RS04845 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMK01_RS04845 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AMK01_RS04850 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMK01_RS04855 PF01040 UbiA prenyltransferase family AMK01_RS04860 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AMK01_RS04865 PF00510 Cytochrome c oxidase subunit III AMK01_RS04870 PF02660 Glycerol-3-phosphate acyltransferase AMK01_RS04885 PF02104 SURF1 family AMK01_RS04890 PF02401 LytB protein AMK01_RS04895 PF01636 Phosphotransferase enzyme family AMK01_RS04900 PF00075 RNase H AMK01_RS04910 PF15887 Putative zinc-binding metallo-peptidase AMK01_RS04910 PF10005 zinc-ribbon domain AMK01_RS04920 PF02622 Uncharacterized ACR, COG1678 AMK01_RS04930 PF08534 Redoxin AMK01_RS04930 PF00462 Glutaredoxin AMK01_RS04940 PF00005 ABC transporter AMK01_RS04945 PF00950 ABC 3 transport family AMK01_RS04950 PF01297 Zinc-uptake complex component A periplasmic AMK01_RS04965 PF00563 EAL domain AMK01_RS04965 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS04965 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS04970 PF13302 Acetyltransferase (GNAT) domain AMK01_RS04975 PF05193 Peptidase M16 inactive domain AMK01_RS04975 PF00675 Insulinase (Peptidase family M16) AMK01_RS04980 PF14821 Threonine synthase N terminus AMK01_RS04980 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS04990 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS04995 PF07690 Major Facilitator Superfamily AMK01_RS05000 PF03466 LysR substrate binding domain AMK01_RS05000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS05040 PF18755 Restriction Enzyme Adenine Methylase Associated AMK01_RS05040 PF01555 DNA methylase AMK01_RS05055 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK01_RS05055 PF14815 NUDIX domain AMK01_RS05080 PF02463 RecF/RecN/SMC N terminal domain AMK01_RS05085 PF00043 Glutathione S-transferase, C-terminal domain AMK01_RS05085 PF02798 Glutathione S-transferase, N-terminal domain AMK01_RS05090 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AMK01_RS05090 PF02896 PEP-utilising enzyme, TIM barrel domain AMK01_RS05090 PF00391 PEP-utilising enzyme, mobile domain AMK01_RS05150 PF14338 Mrr N-terminal domain AMK01_RS05150 PF04471 Restriction endonuclease AMK01_RS05160 PF01420 Type I restriction modification DNA specificity domain AMK01_RS05170 PF02384 N-6 DNA Methylase AMK01_RS05175 PF00271 Helicase conserved C-terminal domain AMK01_RS05175 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AMK01_RS05175 PF04851 Type III restriction enzyme, res subunit AMK01_RS05175 PF08463 EcoEI R protein C-terminal AMK01_RS05190 PF00106 short chain dehydrogenase AMK01_RS05195 PF02661 Fic/DOC family AMK01_RS05195 PF13784 Fic/DOC family N-terminal AMK01_RS05215 PF00501 AMP-binding enzyme AMK01_RS05215 PF01553 Acyltransferase AMK01_RS05220 PF07690 Major Facilitator Superfamily AMK01_RS05225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK01_RS05225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK01_RS05245 PF01638 HxlR-like helix-turn-helix AMK01_RS05250 PF05368 NmrA-like family AMK01_RS05310 PF03472 Autoinducer binding domain AMK01_RS05310 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS05325 PF00672 HAMP domain AMK01_RS05325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS05325 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS05330 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS05330 PF00072 Response regulator receiver domain AMK01_RS05335 PF01022 Bacterial regulatory protein, arsR family AMK01_RS05355 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS05370 PF00106 short chain dehydrogenase AMK01_RS05375 PF06719 AraC-type transcriptional regulator N-terminus AMK01_RS05375 PF12833 Helix-turn-helix domain AMK01_RS05390 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS05415 PF00484 Carbonic anhydrase AMK01_RS05420 PF01740 STAS domain AMK01_RS05420 PF00916 Sulfate permease family AMK01_RS05425 PF14492 Elongation Factor G, domain II AMK01_RS05425 PF00679 Elongation factor G C-terminus AMK01_RS05425 PF03764 Elongation factor G, domain IV AMK01_RS05425 PF00009 Elongation factor Tu GTP binding domain AMK01_RS05465 PF01022 Bacterial regulatory protein, arsR family AMK01_RS05480 PF01022 Bacterial regulatory protein, arsR family AMK01_RS05515 PF02522 Aminoglycoside 3-N-acetyltransferase AMK01_RS05645 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS05695 PF08889 WbqC-like protein family AMK01_RS05710 PF00535 Glycosyl transferase family 2 AMK01_RS05715 PF13649 Methyltransferase domain AMK01_RS05740 PF00483 Nucleotidyl transferase AMK01_RS05745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS05755 PF13180 PDZ domain AMK01_RS05760 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AMK01_RS05760 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS05765 PF03466 LysR substrate binding domain AMK01_RS05765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS05775 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS05775 PF00107 Zinc-binding dehydrogenase AMK01_RS05785 PF00912 Transglycosylase AMK01_RS05785 PF17092 Penicillin-binding protein OB-like domain AMK01_RS05785 PF00905 Penicillin binding protein transpeptidase domain AMK01_RS05805 PF00009 Elongation factor Tu GTP binding domain AMK01_RS05810 PF01507 Phosphoadenosine phosphosulfate reductase family AMK01_RS05815 PF01507 Phosphoadenosine phosphosulfate reductase family AMK01_RS05820 PF02082 Transcriptional regulator AMK01_RS05825 PF00732 GMC oxidoreductase AMK01_RS05825 PF05199 GMC oxidoreductase AMK01_RS05830 PF00171 Aldehyde dehydrogenase family AMK01_RS05835 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS05835 PF13977 BetI-type transcriptional repressor, C-terminal AMK01_RS05850 PF12792 CSS motif domain associated with EAL AMK01_RS05850 PF00563 EAL domain AMK01_RS05855 PF00550 Phosphopantetheine attachment site AMK01_RS05855 PF08659 KR domain AMK01_RS05855 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK01_RS05855 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK01_RS05855 PF16197 Ketoacyl-synthetase C-terminal extension AMK01_RS05855 PF14765 Polyketide synthase dehydratase AMK01_RS05855 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS05855 PF00698 Acyl transferase domain AMK01_RS05855 PF00107 Zinc-binding dehydrogenase AMK01_RS05860 PF07690 Major Facilitator Superfamily AMK01_RS05870 PF07690 Major Facilitator Superfamily AMK01_RS05885 PF00455 DeoR C terminal sensor domain AMK01_RS05885 PF08220 DeoR-like helix-turn-helix domain AMK01_RS05895 PF02798 Glutathione S-transferase, N-terminal domain AMK01_RS05895 PF00043 Glutathione S-transferase, C-terminal domain AMK01_RS05910 PF00005 ABC transporter AMK01_RS05940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS05940 PF03466 LysR substrate binding domain AMK01_RS05945 PF13409 Glutathione S-transferase, N-terminal domain AMK01_RS05955 PF01161 Phosphatidylethanolamine-binding protein AMK01_RS05965 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS05965 PF00563 EAL domain AMK01_RS05965 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS05970 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS05970 PF13191 AAA ATPase domain AMK01_RS05980 PF13426 PAS domain AMK01_RS05980 PF08447 PAS fold AMK01_RS05980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS05985 PF03009 Glycerophosphoryl diester phosphodiesterase family AMK01_RS05990 PF00561 alpha/beta hydrolase fold AMK01_RS06000 PF04679 ATP dependent DNA ligase C terminal region AMK01_RS06000 PF01068 ATP dependent DNA ligase domain AMK01_RS06000 PF04675 DNA ligase N terminus AMK01_RS06010 PF03734 L,D-transpeptidase catalytic domain AMK01_RS06010 PF17969 L,D-transpeptidase C-terminal domain AMK01_RS06015 PF17969 L,D-transpeptidase C-terminal domain AMK01_RS06015 PF03734 L,D-transpeptidase catalytic domain AMK01_RS06020 PF00313 'Cold-shock' DNA-binding domain AMK01_RS06030 PF01165 Ribosomal protein S21 AMK01_RS06040 PF01047 MarR family AMK01_RS06045 PF02566 OsmC-like protein AMK01_RS06065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS06065 PF18029 Glyoxalase-like domain AMK01_RS06070 PF16326 ABC transporter C-terminal domain AMK01_RS06070 PF12848 ABC transporter AMK01_RS06070 PF00005 ABC transporter AMK01_RS06075 PF00005 ABC transporter AMK01_RS06075 PF16326 ABC transporter C-terminal domain AMK01_RS06075 PF12848 ABC transporter AMK01_RS06085 PF05872 Bacterial protein of unknown function (DUF853) AMK01_RS06095 PF00293 NUDIX domain AMK01_RS06105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AMK01_RS06105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AMK01_RS06110 PF13649 Methyltransferase domain AMK01_RS06115 PF03471 Transporter associated domain AMK01_RS06115 PF00571 CBS domain AMK01_RS06115 PF01595 Cyclin M transmembrane N-terminal domain AMK01_RS06130 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS06130 PF00107 Zinc-binding dehydrogenase AMK01_RS06135 PF01063 Amino-transferase class IV AMK01_RS06140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS06140 PF03466 LysR substrate binding domain AMK01_RS06145 PF13533 Biotin-lipoyl like AMK01_RS06150 PF07690 Major Facilitator Superfamily AMK01_RS06160 PF02540 NAD synthase AMK01_RS06165 PF02798 Glutathione S-transferase, N-terminal domain AMK01_RS06165 PF00043 Glutathione S-transferase, C-terminal domain AMK01_RS06175 PF07690 Major Facilitator Superfamily AMK01_RS06185 PF01925 Sulfite exporter TauE/SafE AMK01_RS06190 PF08241 Methyltransferase domain AMK01_RS06200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AMK01_RS06200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AMK01_RS06215 PF01810 LysE type translocator AMK01_RS06235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS06235 PF03466 LysR substrate binding domain AMK01_RS06240 PF01322 Cytochrome C' AMK01_RS06245 PF00034 Cytochrome c AMK01_RS06260 PF02583 Metal-sensitive transcriptional repressor AMK01_RS06280 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS06285 PF01011 PQQ enzyme repeat AMK01_RS06290 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AMK01_RS06295 PF07690 Major Facilitator Superfamily AMK01_RS06305 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMK01_RS06305 PF00326 Prolyl oligopeptidase family AMK01_RS06335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS06345 PF03006 Haemolysin-III related AMK01_RS06360 PF06233 Usg-like family AMK01_RS06365 PF00166 Chaperonin 10 Kd subunit AMK01_RS06370 PF00118 TCP-1/cpn60 chaperonin family AMK01_RS06380 PF13439 Glycosyltransferase Family 4 AMK01_RS06395 PF00011 Hsp20/alpha crystallin family AMK01_RS06400 PF00011 Hsp20/alpha crystallin family AMK01_RS06410 PF13673 Acetyltransferase (GNAT) domain AMK01_RS06410 PF03352 Methyladenine glycosylase AMK01_RS06410 PF00958 GMP synthase C terminal domain AMK01_RS06410 PF13302 Acetyltransferase (GNAT) domain AMK01_RS06410 PF00117 Glutamine amidotransferase class-I AMK01_RS06415 PF01641 SelR domain AMK01_RS06425 PF05443 ROS/MUCR transcriptional regulator protein AMK01_RS06430 PF02657 Fe-S metabolism associated domain AMK01_RS06435 PF17264 Family of unknown function (DUF5330) AMK01_RS06440 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS06450 PF12729 Four helix bundle sensory module for signal transduction AMK01_RS06450 PF00672 HAMP domain AMK01_RS06450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS06475 PF00905 Penicillin binding protein transpeptidase domain AMK01_RS06475 PF00912 Transglycosylase AMK01_RS06480 PF03692 Putative zinc- or iron-chelating domain AMK01_RS06490 PF00106 short chain dehydrogenase AMK01_RS06510 PF00155 Aminotransferase class I and II AMK01_RS06510 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS06520 PF03466 LysR substrate binding domain AMK01_RS06520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS06525 PF02798 Glutathione S-transferase, N-terminal domain AMK01_RS06540 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS06565 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS06565 PF00072 Response regulator receiver domain AMK01_RS06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS06585 PF03100 CcmE AMK01_RS06590 PF01578 Cytochrome C assembly protein AMK01_RS06590 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AMK01_RS06595 PF03918 Cytochrome C biogenesis protein AMK01_RS06605 PF13180 PDZ domain AMK01_RS06610 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS06610 PF00072 Response regulator receiver domain AMK01_RS06615 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS06615 PF00672 HAMP domain AMK01_RS06620 PF03710 Glutamate-ammonia ligase adenylyltransferase AMK01_RS06620 PF08335 GlnD PII-uridylyltransferase AMK01_RS06625 PF00989 PAS fold AMK01_RS06625 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS06625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS06630 PF01433 Peptidase family M1 domain AMK01_RS06630 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AMK01_RS06630 PF11940 Domain of unknown function (DUF3458) Ig-like fold AMK01_RS06655 PF00012 Hsp70 protein AMK01_RS06660 PF00873 AcrB/AcrD/AcrF family AMK01_RS06665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK01_RS06685 PF17969 L,D-transpeptidase C-terminal domain AMK01_RS06685 PF03734 L,D-transpeptidase catalytic domain AMK01_RS06685 PF01476 LysM domain AMK01_RS06695 PF01037 Lrp/AsnC ligand binding domain AMK01_RS06700 PF00571 CBS domain AMK01_RS06700 PF03448 MgtE intracellular N domain AMK01_RS06700 PF01769 Divalent cation transporter AMK01_RS06705 PF07690 Major Facilitator Superfamily AMK01_RS06710 PF00781 Diacylglycerol kinase catalytic domain AMK01_RS06715 PF00120 Glutamine synthetase, catalytic domain AMK01_RS06720 PF00202 Aminotransferase class-III AMK01_RS06725 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMK01_RS06730 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMK01_RS06735 PF00535 Glycosyl transferase family 2 AMK01_RS06740 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AMK01_RS06750 PF04542 Sigma-70 region 2 AMK01_RS06750 PF08281 Sigma-70, region 4 AMK01_RS06760 PF03795 YCII-related domain AMK01_RS06765 PF03795 YCII-related domain AMK01_RS06775 PF01048 Phosphorylase superfamily AMK01_RS06775 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AMK01_RS06800 PF00155 Aminotransferase class I and II AMK01_RS06845 PF04962 KduI/IolB family AMK01_RS06850 PF01261 Xylose isomerase-like TIM barrel AMK01_RS06855 PF00205 Thiamine pyrophosphate enzyme, central domain AMK01_RS06855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK01_RS06855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK01_RS06860 PF00294 pfkB family carbohydrate kinase AMK01_RS06870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS06870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS06875 PF14759 Reductase C-terminal AMK01_RS06875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS06885 PF02530 Porin subfamily AMK01_RS06890 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS06895 PF02706 Chain length determinant protein AMK01_RS06895 PF13614 AAA domain AMK01_RS06895 PF13807 G-rich domain on putative tyrosine kinase AMK01_RS06900 PF00534 Glycosyl transferases group 1 AMK01_RS06900 PF08323 Starch synthase catalytic domain AMK01_RS06910 PF00535 Glycosyl transferase family 2 AMK01_RS06940 PF02397 Bacterial sugar transferase AMK01_RS06945 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS06960 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS06960 PF00072 Response regulator receiver domain AMK01_RS06965 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS06970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS06970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS06975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS06985 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS06990 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS07010 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS07010 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK01_RS07020 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK01_RS07020 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS07030 PF00005 ABC transporter AMK01_RS07030 PF03412 Peptidase C39 family AMK01_RS07030 PF00664 ABC transporter transmembrane region AMK01_RS07050 PF00701 Dihydrodipicolinate synthetase family AMK01_RS07055 PF01668 SmpB protein AMK01_RS07065 PF01192 RNA polymerase Rpb6 AMK01_RS07070 PF02824 TGS domain AMK01_RS07070 PF04607 Region found in RelA / SpoT proteins AMK01_RS07070 PF13291 ACT domain AMK01_RS07085 PF01648 4'-phosphopantetheinyl transferase superfamily AMK01_RS07090 PF10502 Signal peptidase, peptidase S26 AMK01_RS07095 PF00035 Double-stranded RNA binding motif AMK01_RS07095 PF14622 Ribonuclease-III-like AMK01_RS07100 PF01926 50S ribosome-binding GTPase AMK01_RS07100 PF07650 KH domain AMK01_RS07105 PF00027 Cyclic nucleotide-binding domain AMK01_RS07105 PF13545 Crp-like helix-turn-helix domain AMK01_RS07115 PF02565 Recombination protein O C terminal AMK01_RS07115 PF11967 Recombination protein O N terminal AMK01_RS07120 PF00248 Aldo/keto reductase family AMK01_RS07130 PF01966 HD domain AMK01_RS07135 PF00563 EAL domain AMK01_RS07135 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS07135 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS07135 PF13188 PAS domain AMK01_RS07145 PF00080 Copper/zinc superoxide dismutase (SODC) AMK01_RS07150 PF00924 Mechanosensitive ion channel AMK01_RS07150 PF05552 Conserved TM helix AMK01_RS07160 PF01966 HD domain AMK01_RS07165 PF01571 Aminomethyltransferase folate-binding domain AMK01_RS07185 PF00293 NUDIX domain AMK01_RS07190 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AMK01_RS07200 PF01066 CDP-alcohol phosphatidyltransferase AMK01_RS07205 PF02666 Phosphatidylserine decarboxylase AMK01_RS07210 PF01022 Bacterial regulatory protein, arsR family AMK01_RS07220 PF00574 Clp protease AMK01_RS07225 PF00664 ABC transporter transmembrane region AMK01_RS07225 PF00005 ABC transporter AMK01_RS07235 PF03641 Possible lysine decarboxylase AMK01_RS07240 PF03466 LysR substrate binding domain AMK01_RS07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS07245 PF00753 Metallo-beta-lactamase superfamily AMK01_RS07260 PF00892 EamA-like transporter family AMK01_RS07265 PF00682 HMGL-like AMK01_RS07265 PF08502 LeuA allosteric (dimerisation) domain AMK01_RS07270 PF00561 alpha/beta hydrolase fold AMK01_RS07290 PF04480 Protein of unknown function (DUF559) AMK01_RS07295 PF01406 tRNA synthetases class I (C) catalytic domain AMK01_RS07300 PF01183 Glycosyl hydrolases family 25 AMK01_RS07305 PF00106 short chain dehydrogenase AMK01_RS07310 PF13537 Glutamine amidotransferase domain AMK01_RS07310 PF00156 Phosphoribosyl transferase domain AMK01_RS07315 PF02674 Colicin V production protein AMK01_RS07320 PF06745 KaiC AMK01_RS07320 PF18073 Rubredoxin metal binding domain AMK01_RS07325 PF01810 LysE type translocator AMK01_RS07330 PF00842 Alanine racemase, C-terminal domain AMK01_RS07330 PF01168 Alanine racemase, N-terminal domain AMK01_RS07335 PF12852 Cupin AMK01_RS07335 PF12833 Helix-turn-helix domain AMK01_RS07350 PF00772 DnaB-like helicase N terminal domain AMK01_RS07350 PF03796 DnaB-like helicase C terminal domain AMK01_RS07355 PF01281 Ribosomal protein L9, N-terminal domain AMK01_RS07355 PF03948 Ribosomal protein L9, C-terminal domain AMK01_RS07365 PF01084 Ribosomal protein S18 AMK01_RS07370 PF01250 Ribosomal protein S6 AMK01_RS07375 PF00248 Aldo/keto reductase family AMK01_RS07385 PF00698 Acyl transferase domain AMK01_RS07395 PF00550 Phosphopantetheine attachment site AMK01_RS07400 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK01_RS07400 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK01_RS07405 PF02618 YceG-like family AMK01_RS07410 PF03755 YicC-like family, N-terminal region AMK01_RS07410 PF08340 Domain of unknown function (DUF1732) AMK01_RS07415 PF00625 Guanylate kinase AMK01_RS07420 PF00398 Ribosomal RNA adenine dimethylase AMK01_RS07425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AMK01_RS07435 PF04453 LPS transport system D AMK01_RS07435 PF03968 OstA-like protein AMK01_RS07450 PF01569 PAP2 superfamily AMK01_RS07455 PF00883 Cytosol aminopeptidase family, catalytic domain AMK01_RS07455 PF02789 Cytosol aminopeptidase family, N-terminal domain AMK01_RS07465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS07470 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AMK01_RS07470 PF00326 Prolyl oligopeptidase family AMK01_RS07475 PF01522 Polysaccharide deacetylase AMK01_RS07480 PF00005 ABC transporter AMK01_RS07480 PF12848 ABC transporter AMK01_RS07485 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS07485 PF00072 Response regulator receiver domain AMK01_RS07500 PF00334 Nucleoside diphosphate kinase AMK01_RS07520 PF02391 MoaE protein AMK01_RS07530 PF01066 CDP-alcohol phosphatidyltransferase AMK01_RS07535 PF08459 UvrC Helix-hairpin-helix N-terminal AMK01_RS07535 PF01541 GIY-YIG catalytic domain AMK01_RS07535 PF02151 UvrB/uvrC motif AMK01_RS07535 PF12826 Helix-hairpin-helix motif AMK01_RS07545 PF13505 Outer membrane protein beta-barrel domain AMK01_RS07555 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AMK01_RS07560 PF01568 Molydopterin dinucleotide binding domain AMK01_RS07560 PF00384 Molybdopterin oxidoreductase AMK01_RS07560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK01_RS07565 PF00293 NUDIX domain AMK01_RS07570 PF07969 Amidohydrolase family AMK01_RS07575 PF00551 Formyl transferase AMK01_RS07580 PF00586 AIR synthase related protein, N-terminal domain AMK01_RS07580 PF02769 AIR synthase related protein, C-terminal domain AMK01_RS07585 PF01594 AI-2E family transporter AMK01_RS07595 PF17941 Polyphosphate kinase C-terminal domain 1 AMK01_RS07595 PF13089 Polyphosphate kinase N-terminal domain AMK01_RS07595 PF13090 Polyphosphate kinase C-terminal domain 2 AMK01_RS07595 PF02503 Polyphosphate kinase middle domain AMK01_RS07610 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS07615 PF00570 HRDC domain AMK01_RS07615 PF01612 3'-5' exonuclease AMK01_RS07620 PF07732 Multicopper oxidase AMK01_RS07620 PF00394 Multicopper oxidase AMK01_RS07620 PF07731 Multicopper oxidase AMK01_RS07625 PF01336 OB-fold nucleic acid binding domain AMK01_RS07625 PF00152 tRNA synthetases class II (D, K and N) AMK01_RS07625 PF02938 GAD domain AMK01_RS07635 PF03989 DNA gyrase C-terminal domain, beta-propeller AMK01_RS07635 PF00521 DNA gyrase/topoisomerase IV, subunit A AMK01_RS07655 PF04377 Arginine-tRNA-protein transferase, C terminus AMK01_RS07655 PF04376 Arginine-tRNA-protein transferase, N terminus AMK01_RS07665 PF00490 Delta-aminolevulinic acid dehydratase AMK01_RS07685 PF00464 Serine hydroxymethyltransferase AMK01_RS07690 PF03477 ATP cone domain AMK01_RS07695 PF01872 RibD C-terminal domain AMK01_RS07695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AMK01_RS07700 PF00677 Lumazine binding domain AMK01_RS07705 PF00958 GMP synthase C terminal domain AMK01_RS07705 PF00117 Glutamine amidotransferase class-I AMK01_RS07705 PF03352 Methyladenine glycosylase AMK01_RS07705 PF13673 Acetyltransferase (GNAT) domain AMK01_RS07705 PF13302 Acetyltransferase (GNAT) domain AMK01_RS07720 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMK01_RS07725 PF01029 NusB family AMK01_RS07730 PF03030 Inorganic H+ pyrophosphatase AMK01_RS07750 PF02504 Fatty acid synthesis protein AMK01_RS07755 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AMK01_RS07755 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AMK01_RS07760 PF00216 Bacterial DNA-binding protein AMK01_RS07765 PF13411 MerR HTH family regulatory protein AMK01_RS07775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS07775 PF00072 Response regulator receiver domain AMK01_RS07775 PF08448 PAS fold AMK01_RS07775 PF13188 PAS domain AMK01_RS07775 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS07790 PF03552 Cellulose synthase AMK01_RS07790 PF00535 Glycosyl transferase family 2 AMK01_RS07790 PF07238 PilZ domain AMK01_RS07800 PF01270 Glycosyl hydrolases family 8 AMK01_RS07810 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS07850 PF00480 ROK family AMK01_RS07870 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS07885 PF02397 Bacterial sugar transferase AMK01_RS07890 PF13439 Glycosyltransferase Family 4 AMK01_RS07890 PF00534 Glycosyl transferases group 1 AMK01_RS07900 PF02706 Chain length determinant protein AMK01_RS07915 PF02628 Cytochrome oxidase assembly protein AMK01_RS07925 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK01_RS07930 PF00491 Arginase family AMK01_RS07935 PF07690 Major Facilitator Superfamily AMK01_RS07940 PF00380 Ribosomal protein S9/S16 AMK01_RS07945 PF00572 Ribosomal protein L13 AMK01_RS07950 PF00378 Enoyl-CoA hydratase/isomerase AMK01_RS07965 PF13380 CoA binding domain AMK01_RS07970 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK01_RS08005 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS08005 PF13188 PAS domain AMK01_RS08005 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS08005 PF00563 EAL domain AMK01_RS08010 PF00067 Cytochrome P450 AMK01_RS08015 PF17151 Periplasmic sensor domain AMK01_RS08015 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS08020 PF00574 Clp protease AMK01_RS08025 PF07724 AAA domain (Cdc48 subfamily) AMK01_RS08025 PF10431 C-terminal, D2-small domain, of ClpB protein AMK01_RS08025 PF06689 ClpX C4-type zinc finger AMK01_RS08030 PF02190 ATP-dependent protease La (LON) substrate-binding domain AMK01_RS08030 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS08030 PF05362 Lon protease (S16) C-terminal proteolytic domain AMK01_RS08035 PF00216 Bacterial DNA-binding protein AMK01_RS08040 PF00892 EamA-like transporter family AMK01_RS08045 PF00248 Aldo/keto reductase family AMK01_RS08065 PF00255 Glutathione peroxidase AMK01_RS08090 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMK01_RS08095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMK01_RS08100 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMK01_RS08105 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMK01_RS08120 PF10531 SLBB domain AMK01_RS08120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK01_RS08120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMK01_RS08125 PF00829 Ribosomal prokaryotic L21 protein AMK01_RS08130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMK01_RS08130 PF00384 Molybdopterin oxidoreductase AMK01_RS08130 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AMK01_RS08135 PF00146 NADH dehydrogenase AMK01_RS08140 PF12838 4Fe-4S dicluster domain AMK01_RS08145 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMK01_RS08150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMK01_RS08155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AMK01_RS08155 PF00361 Proton-conducting membrane transporter AMK01_RS08160 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMK01_RS08160 PF00361 Proton-conducting membrane transporter AMK01_RS08165 PF00361 Proton-conducting membrane transporter AMK01_RS08170 PF02237 Biotin protein ligase C terminal domain AMK01_RS08170 PF03099 Biotin/lipoate A/B protein ligase family AMK01_RS08170 PF08279 HTH domain AMK01_RS08175 PF17770 Ribonuclease J C-terminal domain AMK01_RS08175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AMK01_RS08175 PF12706 Beta-lactamase superfamily domain AMK01_RS08190 PF03129 Anticodon binding domain AMK01_RS08190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK01_RS08195 PF12704 MacB-like periplasmic core domain AMK01_RS08195 PF02687 FtsX-like permease family AMK01_RS08200 PF00005 ABC transporter AMK01_RS08210 PF14579 Helix-hairpin-helix motif AMK01_RS08210 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMK01_RS08210 PF02811 PHP domain AMK01_RS08210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMK01_RS08220 PF11799 impB/mucB/samB family C-terminal domain AMK01_RS08220 PF00817 impB/mucB/samB family AMK01_RS08240 PF00072 Response regulator receiver domain AMK01_RS08245 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS08245 PF00072 Response regulator receiver domain AMK01_RS08250 PF00471 Ribosomal protein L33 AMK01_RS08255 PF07690 Major Facilitator Superfamily AMK01_RS08265 PF00773 RNB domain AMK01_RS08265 PF17876 Cold shock domain AMK01_RS08265 PF08206 Ribonuclease B OB domain AMK01_RS08265 PF08461 Ribonuclease R winged-helix domain AMK01_RS08265 PF00575 S1 RNA binding domain AMK01_RS08270 PF13368 Topoisomerase C-terminal repeat AMK01_RS08270 PF01396 Topoisomerase DNA binding C4 zinc finger AMK01_RS08270 PF01751 Toprim domain AMK01_RS08270 PF01131 DNA topoisomerase AMK01_RS08275 PF02481 DNA recombination-mediator protein A AMK01_RS08275 PF17782 DprA winged helix domain AMK01_RS08280 PF02660 Glycerol-3-phosphate acyltransferase AMK01_RS08285 PF01979 Amidohydrolase family AMK01_RS08290 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMK01_RS08290 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMK01_RS08295 PF18158 Adaptive response protein AidB N-terminal domain AMK01_RS08295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK01_RS08295 PF02770 Acyl-CoA dehydrogenase, middle domain AMK01_RS08300 PF00575 S1 RNA binding domain AMK01_RS08300 PF10150 Ribonuclease E/G family AMK01_RS08300 PF12111 Polyribonucleotide phosphorylase C terminal AMK01_RS08305 PF01520 N-acetylmuramoyl-L-alanine amidase AMK01_RS08305 PF11741 AMIN domain AMK01_RS08310 PF00912 Transglycosylase AMK01_RS08310 PF00905 Penicillin binding protein transpeptidase domain AMK01_RS08310 PF17092 Penicillin-binding protein OB-like domain AMK01_RS08315 PF00472 RF-1 domain AMK01_RS08315 PF03462 PCRF domain AMK01_RS08330 PF01513 ATP-NAD kinase AMK01_RS08350 PF08032 RNA 2'-O ribose methyltransferase substrate binding AMK01_RS08350 PF00588 SpoU rRNA Methylase family AMK01_RS08365 PF03144 Elongation factor Tu domain 2 AMK01_RS08365 PF00009 Elongation factor Tu GTP binding domain AMK01_RS08365 PF03143 Elongation factor Tu C-terminal domain AMK01_RS08370 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS08380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AMK01_RS08385 PF00467 KOW motif AMK01_RS08385 PF02357 Transcription termination factor nusG AMK01_RS08390 PF00298 Ribosomal protein L11, RNA binding domain AMK01_RS08390 PF03946 Ribosomal protein L11, N-terminal domain AMK01_RS08395 PF00687 Ribosomal protein L1p/L10e family AMK01_RS08400 PF00466 Ribosomal protein L10 AMK01_RS08405 PF00542 Ribosomal protein L7/L12 C-terminal domain AMK01_RS08405 PF16320 Ribosomal protein L7/L12 dimerisation domain AMK01_RS08410 PF00562 RNA polymerase Rpb2, domain 6 AMK01_RS08410 PF04560 RNA polymerase Rpb2, domain 7 AMK01_RS08410 PF04563 RNA polymerase beta subunit AMK01_RS08410 PF04561 RNA polymerase Rpb2, domain 2 AMK01_RS08410 PF04565 RNA polymerase Rpb2, domain 3 AMK01_RS08410 PF10385 RNA polymerase beta subunit external 1 domain AMK01_RS08415 PF00623 RNA polymerase Rpb1, domain 2 AMK01_RS08415 PF04983 RNA polymerase Rpb1, domain 3 AMK01_RS08415 PF05000 RNA polymerase Rpb1, domain 4 AMK01_RS08415 PF04998 RNA polymerase Rpb1, domain 5 AMK01_RS08415 PF04997 RNA polymerase Rpb1, domain 1 AMK01_RS08425 PF00164 Ribosomal protein S12/S23 AMK01_RS08430 PF00177 Ribosomal protein S7p/S5e AMK01_RS08435 PF00679 Elongation factor G C-terminus AMK01_RS08435 PF03144 Elongation factor Tu domain 2 AMK01_RS08435 PF00009 Elongation factor Tu GTP binding domain AMK01_RS08435 PF03764 Elongation factor G, domain IV AMK01_RS08435 PF14492 Elongation Factor G, domain II AMK01_RS08440 PF03143 Elongation factor Tu C-terminal domain AMK01_RS08440 PF00009 Elongation factor Tu GTP binding domain AMK01_RS08440 PF03144 Elongation factor Tu domain 2 AMK01_RS08445 PF00338 Ribosomal protein S10p/S20e AMK01_RS08450 PF00297 Ribosomal protein L3 AMK01_RS08455 PF00573 Ribosomal protein L4/L1 family AMK01_RS08460 PF00276 Ribosomal protein L23 AMK01_RS08465 PF03947 Ribosomal Proteins L2, C-terminal domain AMK01_RS08465 PF00181 Ribosomal Proteins L2, RNA binding domain AMK01_RS08470 PF00203 Ribosomal protein S19 AMK01_RS08475 PF00237 Ribosomal protein L22p/L17e AMK01_RS08480 PF00189 Ribosomal protein S3, C-terminal domain AMK01_RS08480 PF07650 KH domain AMK01_RS08485 PF00252 Ribosomal protein L16p/L10e AMK01_RS08490 PF00831 Ribosomal L29 protein AMK01_RS08495 PF00366 Ribosomal protein S17 AMK01_RS08500 PF00238 Ribosomal protein L14p/L23e AMK01_RS08505 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AMK01_RS08505 PF00467 KOW motif AMK01_RS08510 PF00673 ribosomal L5P family C-terminus AMK01_RS08510 PF00281 Ribosomal protein L5 AMK01_RS08515 PF00253 Ribosomal protein S14p/S29e AMK01_RS08520 PF00410 Ribosomal protein S8 AMK01_RS08525 PF00347 Ribosomal protein L6 AMK01_RS08530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AMK01_RS08535 PF03719 Ribosomal protein S5, C-terminal domain AMK01_RS08535 PF00333 Ribosomal protein S5, N-terminal domain AMK01_RS08540 PF00327 Ribosomal protein L30p/L7e AMK01_RS08545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AMK01_RS08550 PF00344 SecY translocase AMK01_RS08555 PF05191 Adenylate kinase, active site lid AMK01_RS08560 PF00416 Ribosomal protein S13/S18 AMK01_RS08565 PF00411 Ribosomal protein S11 AMK01_RS08570 PF01000 RNA polymerase Rpb3/RpoA insert domain AMK01_RS08570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AMK01_RS08570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AMK01_RS08575 PF01196 Ribosomal protein L17 AMK01_RS08585 PF01794 Ferric reductase like transmembrane component AMK01_RS08590 PF00174 Oxidoreductase molybdopterin binding domain AMK01_RS08595 PF00920 Dehydratase family AMK01_RS08610 PF00595 PDZ domain AMK01_RS08615 PF12002 MgsA AAA+ ATPase C terminal AMK01_RS08615 PF16193 AAA C-terminal domain AMK01_RS08615 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS08625 PF02558 Ketopantoate reductase PanE/ApbA AMK01_RS08625 PF08546 Ketopantoate reductase PanE/ApbA C terminal AMK01_RS08630 PF00106 short chain dehydrogenase AMK01_RS08635 PF03466 LysR substrate binding domain AMK01_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS08645 PF07859 alpha/beta hydrolase fold AMK01_RS08655 PF16736 Single Cache-like AMK01_RS08655 PF00989 PAS fold AMK01_RS08655 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS08660 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS08665 PF01144 Coenzyme A transferase AMK01_RS08670 PF00378 Enoyl-CoA hydratase/isomerase AMK01_RS08675 PF00171 Aldehyde dehydrogenase family AMK01_RS08680 PF01547 Bacterial extracellular solute-binding protein AMK01_RS08685 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS08690 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS08695 PF17912 MalK OB fold domain AMK01_RS08695 PF00005 ABC transporter AMK01_RS08700 PF00732 GMC oxidoreductase AMK01_RS08700 PF05199 GMC oxidoreductase AMK01_RS08705 PF05199 GMC oxidoreductase AMK01_RS08705 PF00732 GMC oxidoreductase AMK01_RS08710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS08710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS08715 PF00890 FAD binding domain AMK01_RS08715 PF02910 Fumarate reductase flavoprotein C-term AMK01_RS08745 PF00072 Response regulator receiver domain AMK01_RS08745 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS08750 PF05384 Sensor protein DegS AMK01_RS08750 PF07730 Histidine kinase AMK01_RS08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS08755 PF01209 ubiE/COQ5 methyltransferase family AMK01_RS08790 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AMK01_RS08795 PF01037 Lrp/AsnC ligand binding domain AMK01_RS08800 PF01037 Lrp/AsnC ligand binding domain AMK01_RS08805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS08810 PF04209 homogentisate 1,2-dioxygenase AMK01_RS08820 PF02798 Glutathione S-transferase, N-terminal domain AMK01_RS08820 PF14497 Glutathione S-transferase, C-terminal domain AMK01_RS08855 PF00300 Histidine phosphatase superfamily (branch 1) AMK01_RS08860 PF08471 Class II vitamin B12-dependent ribonucleotide reductase AMK01_RS08860 PF02867 Ribonucleotide reductase, barrel domain AMK01_RS08865 PF00156 Phosphoribosyl transferase domain AMK01_RS08875 PF00994 Probable molybdopterin binding domain AMK01_RS08875 PF18146 Damage-inducible protein CinA KH domain AMK01_RS08875 PF02464 Competence-damaged protein AMK01_RS08890 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS08890 PF00585 C-terminal regulatory domain of Threonine dehydratase AMK01_RS08900 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS08900 PF05230 MASE2 domain AMK01_RS08915 PF02525 Flavodoxin-like fold AMK01_RS08920 PF03466 LysR substrate binding domain AMK01_RS08920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS08925 PF00149 Calcineurin-like phosphoesterase AMK01_RS08925 PF02872 5'-nucleotidase, C-terminal domain AMK01_RS08940 PF01037 Lrp/AsnC ligand binding domain AMK01_RS08945 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK01_RS08945 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK01_RS08960 PF00581 Rhodanese-like domain AMK01_RS08965 PF01411 tRNA synthetases class II (A) AMK01_RS08965 PF02272 DHHA1 domain AMK01_RS08965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK01_RS08970 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS08975 PF12973 ChrR Cupin-like domain AMK01_RS08980 PF00106 short chain dehydrogenase AMK01_RS08990 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS08995 PF01568 Molydopterin dinucleotide binding domain AMK01_RS08995 PF04324 BFD-like [2Fe-2S] binding domain AMK01_RS08995 PF00384 Molybdopterin oxidoreductase AMK01_RS08995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK01_RS09005 PF04324 BFD-like [2Fe-2S] binding domain AMK01_RS09005 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AMK01_RS09005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AMK01_RS09005 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS09005 PF18267 Rubredoxin NAD+ reductase C-terminal domain AMK01_RS09010 PF07690 Major Facilitator Superfamily AMK01_RS09020 PF08376 Nitrate and nitrite sensing AMK01_RS09020 PF03861 ANTAR domain AMK01_RS09025 PF00578 AhpC/TSA family AMK01_RS09025 PF10417 C-terminal domain of 1-Cys peroxiredoxin AMK01_RS09040 PF05161 MOFRL family AMK01_RS09040 PF13660 Domain of unknown function (DUF4147) AMK01_RS09080 PF05532 CsbD-like AMK01_RS09140 PF00133 tRNA synthetases class I (I, L, M and V) AMK01_RS09140 PF10458 Valyl tRNA synthetase tRNA binding arm AMK01_RS09140 PF08264 Anticodon-binding domain of tRNA AMK01_RS09155 PF08238 Sel1 repeat AMK01_RS09165 PF01521 Iron-sulphur cluster biosynthesis AMK01_RS09170 PF01966 HD domain AMK01_RS09170 PF13286 Phosphohydrolase-associated domain AMK01_RS09175 PF00750 tRNA synthetases class I (R) AMK01_RS09175 PF05746 DALR anticodon binding domain AMK01_RS09175 PF03485 Arginyl tRNA synthetase N terminal domain AMK01_RS09185 PF00933 Glycosyl hydrolase family 3 N terminal domain AMK01_RS09190 PF02616 Segregation and condensation protein ScpA AMK01_RS09195 PF04079 Segregation and condensation complex subunit ScpB AMK01_RS09200 PF02416 mttA/Hcf106 family AMK01_RS09205 PF02416 mttA/Hcf106 family AMK01_RS09210 PF00902 Sec-independent protein translocase protein (TatC) AMK01_RS09215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK01_RS09215 PF02403 Seryl-tRNA synthetase N-terminal domain AMK01_RS09220 PF01975 Survival protein SurE AMK01_RS09245 PF01551 Peptidase family M23 AMK01_RS09245 PF01476 LysM domain AMK01_RS09245 PF08525 Opacity-associated protein A N-terminal motif AMK01_RS09255 PF02699 Preprotein translocase subunit AMK01_RS09260 PF02355 Protein export membrane protein AMK01_RS09260 PF07549 SecD/SecF GG Motif AMK01_RS09280 PF01134 Glucose inhibited division protein A AMK01_RS09310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AMK01_RS09310 PF05698 Bacterial trigger factor protein (TF) C-terminus AMK01_RS09310 PF05697 Bacterial trigger factor protein (TF) AMK01_RS09320 PF13282 Domain of unknown function (DUF4070) AMK01_RS09320 PF04055 Radical SAM superfamily AMK01_RS09320 PF02310 B12 binding domain AMK01_RS09330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK01_RS09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS09335 PF01070 FMN-dependent dehydrogenase AMK01_RS09345 PF04002 RadC-like JAB domain AMK01_RS09350 PF00557 Metallopeptidase family M24 AMK01_RS09365 PF03652 Holliday junction resolvase AMK01_RS09375 PF02686 Glu-tRNAGln amidotransferase C subunit AMK01_RS09380 PF01425 Amidase AMK01_RS09425 PF02637 GatB domain AMK01_RS09425 PF02934 GatB/GatE catalytic domain AMK01_RS09445 PF09923 Uncharacterized protein conserved in bacteria (DUF2155) AMK01_RS09455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AMK01_RS09460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK01_RS09460 PF00289 Biotin carboxylase, N-terminal domain AMK01_RS09460 PF02785 Biotin carboxylase C-terminal domain AMK01_RS09465 PF00364 Biotin-requiring enzyme AMK01_RS09470 PF01220 Dehydroquinase class II AMK01_RS09480 PF00155 Aminotransferase class I and II AMK01_RS09490 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AMK01_RS09500 PF00155 Aminotransferase class I and II AMK01_RS09505 PF03447 Homoserine dehydrogenase, NAD binding domain AMK01_RS09505 PF01842 ACT domain AMK01_RS09505 PF00742 Homoserine dehydrogenase AMK01_RS09515 PF17768 RecJ OB domain AMK01_RS09515 PF02272 DHHA1 domain AMK01_RS09515 PF01368 DHH family AMK01_RS09540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS09545 PF00313 'Cold-shock' DNA-binding domain AMK01_RS09585 PF00005 ABC transporter AMK01_RS09590 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS09600 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS09605 PF01053 Cys/Met metabolism PLP-dependent enzyme AMK01_RS09610 PF01494 FAD binding domain AMK01_RS09620 PF00561 alpha/beta hydrolase fold AMK01_RS09625 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS09625 PF06426 Serine acetyltransferase, N-terminal AMK01_RS09640 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMK01_RS09645 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS09645 PF07724 AAA domain (Cdc48 subfamily) AMK01_RS09645 PF17871 AAA lid domain AMK01_RS09645 PF02861 Clp amino terminal domain, pathogenicity island component AMK01_RS09645 PF10431 C-terminal, D2-small domain, of ClpB protein AMK01_RS09650 PF01230 HIT domain AMK01_RS09675 PF05816 Toxic anion resistance protein (TelA) AMK01_RS09695 PF00318 Ribosomal protein S2 AMK01_RS09700 PF00889 Elongation factor TS AMK01_RS09705 PF00696 Amino acid kinase family AMK01_RS09710 PF01765 Ribosome recycling factor AMK01_RS09715 PF01255 Putative undecaprenyl diphosphate synthase AMK01_RS09725 PF17820 PDZ domain AMK01_RS09725 PF02163 Peptidase family M50 AMK01_RS09730 PF01103 Surface antigen AMK01_RS09730 PF07244 Surface antigen variable number repeat AMK01_RS09735 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AMK01_RS09735 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS09740 PF07977 FabA-like domain AMK01_RS09745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AMK01_RS09745 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS09750 PF17930 LpxI N-terminal domain AMK01_RS09750 PF06230 LpxI C-terminal domain AMK01_RS09755 PF02684 Lipid-A-disaccharide synthetase AMK01_RS09760 PF00285 Citrate synthase, C-terminal domain AMK01_RS09770 PF00717 Peptidase S24-like AMK01_RS09770 PF01726 LexA DNA binding domain AMK01_RS09780 PF00793 DAHP synthetase I family AMK01_RS09785 PF00113 Enolase, C-terminal TIM barrel domain AMK01_RS09785 PF03952 Enolase, N-terminal domain AMK01_RS09795 PF00676 Dehydrogenase E1 component AMK01_RS09800 PF02779 Transketolase, pyrimidine binding domain AMK01_RS09800 PF00364 Biotin-requiring enzyme AMK01_RS09800 PF02780 Transketolase, C-terminal domain AMK01_RS09805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMK01_RS09805 PF00364 Biotin-requiring enzyme AMK01_RS09805 PF02817 e3 binding domain AMK01_RS09820 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS09820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK01_RS09835 PF04055 Radical SAM superfamily AMK01_RS09835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AMK01_RS09845 PF03364 Polyketide cyclase / dehydrase and lipid transport AMK01_RS09850 PF02464 Competence-damaged protein AMK01_RS09855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AMK01_RS09855 PF02542 YgbB family AMK01_RS09860 PF01207 Dihydrouridine synthase (Dus) AMK01_RS09865 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS09870 PF00158 Sigma-54 interaction domain AMK01_RS09870 PF02954 Bacterial regulatory protein, Fis family AMK01_RS09870 PF00072 Response regulator receiver domain AMK01_RS09875 PF01593 Flavin containing amine oxidoreductase AMK01_RS09885 PF00107 Zinc-binding dehydrogenase AMK01_RS09885 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS09895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS09895 PF03466 LysR substrate binding domain AMK01_RS09900 PF07690 Major Facilitator Superfamily AMK01_RS09905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS09905 PF03466 LysR substrate binding domain AMK01_RS09910 PF00155 Aminotransferase class I and II AMK01_RS09915 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS09920 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS09930 PF00005 ABC transporter AMK01_RS09935 PF13462 Thioredoxin AMK01_RS09940 PF00248 Aldo/keto reductase family AMK01_RS09945 PF13458 Periplasmic binding protein AMK01_RS09950 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS09960 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK01_RS09960 PF00005 ABC transporter AMK01_RS09965 PF00005 ABC transporter AMK01_RS09970 PF00155 Aminotransferase class I and II AMK01_RS09975 PF03466 LysR substrate binding domain AMK01_RS09975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS09980 PF05378 Hydantoinase/oxoprolinase N-terminal region AMK01_RS09980 PF01968 Hydantoinase/oxoprolinase AMK01_RS09995 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK01_RS10000 PF00672 HAMP domain AMK01_RS10000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS10000 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS10000 PF00989 PAS fold AMK01_RS10005 PF02954 Bacterial regulatory protein, Fis family AMK01_RS10005 PF00072 Response regulator receiver domain AMK01_RS10005 PF00158 Sigma-54 interaction domain AMK01_RS10010 PF01063 Amino-transferase class IV AMK01_RS10015 PF17209 Hfq protein AMK01_RS10020 PF16360 GTP-binding GTPase Middle Region AMK01_RS10020 PF13167 GTP-binding GTPase N-terminal AMK01_RS10020 PF01926 50S ribosome-binding GTPase AMK01_RS10025 PF03819 MazG nucleotide pyrophosphohydrolase domain AMK01_RS10035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK01_RS10035 PF10414 Sirohaem synthase dimerisation region AMK01_RS10035 PF14824 Sirohaem biosynthesis protein central AMK01_RS10055 PF01494 FAD binding domain AMK01_RS10060 PF03547 Membrane transport protein AMK01_RS10065 PF02683 Cytochrome C biogenesis protein transmembrane region AMK01_RS10110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMK01_RS10110 PF02811 PHP domain AMK01_RS10110 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMK01_RS10110 PF14579 Helix-hairpin-helix motif AMK01_RS10125 PF04679 ATP dependent DNA ligase C terminal region AMK01_RS10125 PF13298 DNA polymerase Ligase (LigD) AMK01_RS10125 PF01068 ATP dependent DNA ligase domain AMK01_RS10160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AMK01_RS10160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AMK01_RS10225 PF00092 von Willebrand factor type A domain AMK01_RS10250 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS10250 PF17862 AAA+ lid domain AMK01_RS10250 PF01434 Peptidase family M41 AMK01_RS10265 PF02899 Phage integrase, N-terminal SAM-like domain AMK01_RS10265 PF00589 Phage integrase family AMK01_RS10270 PF05717 IS66 Orf2 like protein AMK01_RS10275 PF13817 IS66 C-terminal element AMK01_RS10275 PF13007 Transposase C of IS166 homeodomain AMK01_RS10275 PF03050 Transposase IS66 family AMK01_RS10275 PF13005 zinc-finger binding domain of transposase IS66 AMK01_RS10355 PF01494 FAD binding domain AMK01_RS10375 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS10380 PF00005 ABC transporter AMK01_RS10380 PF00664 ABC transporter transmembrane region AMK01_RS10420 PF03928 Haem-degrading AMK01_RS10425 PF12833 Helix-turn-helix domain AMK01_RS10435 PF01042 Endoribonuclease L-PSP AMK01_RS10440 PF02525 Flavodoxin-like fold AMK01_RS10450 PF07969 Amidohydrolase family AMK01_RS10460 PF00005 ABC transporter AMK01_RS10475 PF02633 Creatinine amidohydrolase AMK01_RS10500 PF01547 Bacterial extracellular solute-binding protein AMK01_RS10505 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10510 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10515 PF03459 TOBE domain AMK01_RS10515 PF17912 MalK OB fold domain AMK01_RS10515 PF00005 ABC transporter AMK01_RS10525 PF07729 FCD domain AMK01_RS10525 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS10535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AMK01_RS10540 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10545 PF00571 CBS domain AMK01_RS10545 PF00005 ABC transporter AMK01_RS10550 PF00701 Dihydrodipicolinate synthetase family AMK01_RS10555 PF03786 D-mannonate dehydratase (UxuA) AMK01_RS10560 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS10560 PF07729 FCD domain AMK01_RS10565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS10570 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10575 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK01_RS10580 PF00005 ABC transporter AMK01_RS10580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS10585 PF00005 ABC transporter AMK01_RS10585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS10590 PF03358 NADPH-dependent FMN reductase AMK01_RS10595 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS10610 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10615 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10620 PF00005 ABC transporter AMK01_RS10620 PF17912 MalK OB fold domain AMK01_RS10645 PF00005 ABC transporter AMK01_RS10645 PF02687 FtsX-like permease family AMK01_RS10645 PF12704 MacB-like periplasmic core domain AMK01_RS10650 PF00005 ABC transporter AMK01_RS10650 PF12704 MacB-like periplasmic core domain AMK01_RS10650 PF02687 FtsX-like permease family AMK01_RS10660 PF00970 Oxidoreductase FAD-binding domain AMK01_RS10660 PF00175 Oxidoreductase NAD-binding domain AMK01_RS10675 PF00107 Zinc-binding dehydrogenase AMK01_RS10675 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS10680 PF00005 ABC transporter AMK01_RS10690 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS10695 PF02608 ABC transporter substrate-binding protein PnrA-like AMK01_RS10700 PF13407 Periplasmic binding protein domain AMK01_RS10705 PF00005 ABC transporter AMK01_RS10710 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS10715 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS10720 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS10720 PF07729 FCD domain AMK01_RS10725 PF12804 MobA-like NTP transferase domain AMK01_RS10725 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS10730 PF01380 SIS domain AMK01_RS10740 PF00271 Helicase conserved C-terminal domain AMK01_RS10740 PF17191 RecG wedge domain AMK01_RS10740 PF00270 DEAD/DEAH box helicase AMK01_RS10750 PF00270 DEAD/DEAH box helicase AMK01_RS10750 PF17757 UvrB interaction domain AMK01_RS10750 PF02559 CarD-like/TRCF domain AMK01_RS10750 PF03461 TRCF domain AMK01_RS10750 PF00271 Helicase conserved C-terminal domain AMK01_RS10760 PF01121 Dephospho-CoA kinase AMK01_RS10760 PF04229 GrpB protein AMK01_RS10770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS10785 PF03951 Glutamine synthetase, beta-Grasp domain AMK01_RS10785 PF00120 Glutamine synthetase, catalytic domain AMK01_RS10790 PF00543 Nitrogen regulatory protein P-II AMK01_RS10800 PF01256 Carbohydrate kinase AMK01_RS10800 PF03853 YjeF-related protein N-terminus AMK01_RS10810 PF17760 UvrA interaction domain AMK01_RS10810 PF17755 UvrA DNA-binding domain AMK01_RS10815 PF00436 Single-strand binding protein family AMK01_RS10825 PF01914 MarC family integral membrane protein AMK01_RS10830 PF00521 DNA gyrase/topoisomerase IV, subunit A AMK01_RS10830 PF03989 DNA gyrase C-terminal domain, beta-propeller AMK01_RS10845 PF01467 Cytidylyltransferase-like AMK01_RS10850 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMK01_RS10855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AMK01_RS10860 PF02547 Queuosine biosynthesis protein AMK01_RS10865 PF01702 Queuine tRNA-ribosyltransferase AMK01_RS10875 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK01_RS10875 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK01_RS10880 PF01638 HxlR-like helix-turn-helix AMK01_RS10890 PF00459 Inositol monophosphatase family AMK01_RS10895 PF08402 TOBE domain AMK01_RS10895 PF00005 ABC transporter AMK01_RS10900 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10915 PF00072 Response regulator receiver domain AMK01_RS10915 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS10920 PF00072 Response regulator receiver domain AMK01_RS10920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS10920 PF13426 PAS domain AMK01_RS10960 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS10965 PF00005 ABC transporter AMK01_RS10970 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS10980 PF07729 FCD domain AMK01_RS10980 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS10985 PF00491 Arginase family AMK01_RS10990 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS10995 PF00202 Aminotransferase class-III AMK01_RS11005 PF00171 Aldehyde dehydrogenase family AMK01_RS11010 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS11010 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS11010 PF00563 EAL domain AMK01_RS11025 PF00924 Mechanosensitive ion channel AMK01_RS11040 PF03741 Integral membrane protein TerC family AMK01_RS11045 PF03099 Biotin/lipoate A/B protein ligase family AMK01_RS11045 PF12706 Beta-lactamase superfamily domain AMK01_RS11050 PF01026 TatD related DNase AMK01_RS11055 PF09334 tRNA synthetases class I (M) AMK01_RS11055 PF08264 Anticodon-binding domain of tRNA AMK01_RS11060 PF01925 Sulfite exporter TauE/SafE AMK01_RS11065 PF09115 DNA polymerase III, delta subunit, C terminal AMK01_RS11070 PF02223 Thymidylate kinase AMK01_RS11080 PF03330 Lytic transglycolase AMK01_RS11080 PF05036 Sporulation related domain AMK01_RS11140 PF00591 Glycosyl transferase family, a/b domain AMK01_RS11140 PF02885 Glycosyl transferase family, helical bundle domain AMK01_RS11145 PF00218 Indole-3-glycerol phosphate synthase AMK01_RS11150 PF01967 MoaC family AMK01_RS11155 PF00994 Probable molybdopterin binding domain AMK01_RS11155 PF03453 MoeA N-terminal region (domain I and II) AMK01_RS11155 PF03454 MoeA C-terminal region (domain IV) AMK01_RS11170 PF00271 Helicase conserved C-terminal domain AMK01_RS11170 PF00270 DEAD/DEAH box helicase AMK01_RS11170 PF03880 DbpA RNA binding domain AMK01_RS11185 PF00285 Citrate synthase, C-terminal domain AMK01_RS11190 PF00285 Citrate synthase, C-terminal domain AMK01_RS11195 PF00117 Glutamine amidotransferase class-I AMK01_RS11195 PF06418 CTP synthase N-terminus AMK01_RS11200 PF03840 Preprotein translocase SecG subunit AMK01_RS11205 PF00121 Triosephosphate isomerase AMK01_RS11215 PF01751 Toprim domain AMK01_RS11215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS11215 PF00204 DNA gyrase B AMK01_RS11215 PF00986 DNA gyrase B subunit, carboxyl terminus AMK01_RS11225 PF01594 AI-2E family transporter AMK01_RS11230 PF00583 Acetyltransferase (GNAT) family AMK01_RS11260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK01_RS11260 PF03129 Anticodon binding domain AMK01_RS11260 PF02824 TGS domain AMK01_RS11260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AMK01_RS11270 PF01809 Putative membrane protein insertion efficiency factor AMK01_RS11275 PF01592 NifU-like N terminal domain AMK01_RS11280 PF01227 GTP cyclohydrolase I AMK01_RS11285 PF01502 Phosphoribosyl-AMP cyclohydrolase AMK01_RS11290 PF01734 Patatin-like phospholipase AMK01_RS11315 PF00561 alpha/beta hydrolase fold AMK01_RS11330 PF00768 D-alanyl-D-alanine carboxypeptidase AMK01_RS11330 PF07943 Penicillin-binding protein 5, C-terminal domain AMK01_RS11345 PF03315 Serine dehydratase beta chain AMK01_RS11345 PF03313 Serine dehydratase alpha chain AMK01_RS11360 PF00376 MerR family regulatory protein AMK01_RS11360 PF09278 MerR, DNA binding AMK01_RS11365 PF03448 MgtE intracellular N domain AMK01_RS11365 PF01769 Divalent cation transporter AMK01_RS11365 PF00571 CBS domain AMK01_RS11370 PF01327 Polypeptide deformylase AMK01_RS11395 PF03099 Biotin/lipoate A/B protein ligase family AMK01_RS11410 PF18140 Propionyl-coenzyme A carboxylase BT domain AMK01_RS11410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK01_RS11410 PF00364 Biotin-requiring enzyme AMK01_RS11410 PF00289 Biotin carboxylase, N-terminal domain AMK01_RS11410 PF02785 Biotin carboxylase C-terminal domain AMK01_RS11415 PF00107 Zinc-binding dehydrogenase AMK01_RS11415 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS11420 PF13673 Acetyltransferase (GNAT) domain AMK01_RS11425 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AMK01_RS11430 PF00893 Small Multidrug Resistance protein AMK01_RS11435 PF07681 DoxX AMK01_RS11440 PF01039 Carboxyl transferase domain AMK01_RS11455 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS11460 PF01479 S4 domain AMK01_RS11460 PF00849 RNA pseudouridylate synthase AMK01_RS11465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AMK01_RS11485 PF01571 Aminomethyltransferase folate-binding domain AMK01_RS11485 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK01_RS11490 PF01597 Glycine cleavage H-protein AMK01_RS11495 PF02347 Glycine cleavage system P-protein AMK01_RS11500 PF01183 Glycosyl hydrolases family 25 AMK01_RS11505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AMK01_RS11505 PF07559 Flagellar basal body protein FlaE AMK01_RS11505 PF00460 Flagella basal body rod protein AMK01_RS11510 PF01521 Iron-sulphur cluster biosynthesis AMK01_RS11515 PF01883 Iron-sulfur cluster assembly protein AMK01_RS11520 PF00266 Aminotransferase class-V AMK01_RS11525 PF01458 Uncharacterized protein family (UPF0051) AMK01_RS11530 PF00005 ABC transporter AMK01_RS11540 PF01458 Uncharacterized protein family (UPF0051) AMK01_RS11545 PF00266 Aminotransferase class-V AMK01_RS11550 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AMK01_RS11560 PF03702 Anhydro-N-acetylmuramic acid kinase AMK01_RS11565 PF01479 S4 domain AMK01_RS11565 PF00579 tRNA synthetases class I (W and Y) AMK01_RS11575 PF16657 Maltogenic Amylase, C-terminal domain AMK01_RS11575 PF00128 Alpha amylase, catalytic domain AMK01_RS11585 PF00578 AhpC/TSA family AMK01_RS11590 PF04305 Protein of unknown function (DUF455) AMK01_RS11595 PF10145 Phage-related minor tail protein AMK01_RS11595 PF01464 Transglycosylase SLT domain AMK01_RS11595 PF01551 Peptidase family M23 AMK01_RS11600 PF00271 Helicase conserved C-terminal domain AMK01_RS11600 PF00270 DEAD/DEAH box helicase AMK01_RS11605 PF03099 Biotin/lipoate A/B protein ligase family AMK01_RS11605 PF00293 NUDIX domain AMK01_RS11615 PF01613 Flavin reductase like domain AMK01_RS11625 PF00834 Ribulose-phosphate 3 epimerase family AMK01_RS11640 PF00206 Lyase AMK01_RS11640 PF10397 Adenylosuccinate lyase C-terminus AMK01_RS11665 PF00563 EAL domain AMK01_RS11665 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS11665 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS11670 PF01259 SAICAR synthetase AMK01_RS11675 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AMK01_RS11680 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AMK01_RS11700 PF07729 FCD domain AMK01_RS11700 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS11710 PF00586 AIR synthase related protein, N-terminal domain AMK01_RS11710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AMK01_RS11710 PF02769 AIR synthase related protein, C-terminal domain AMK01_RS11720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS11720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS11725 PF01220 Dehydroquinase class II AMK01_RS11735 PF08501 Shikimate dehydrogenase substrate binding domain AMK01_RS11735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AMK01_RS11740 PF00005 ABC transporter AMK01_RS11745 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS11750 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS11755 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS11770 PF04444 Catechol dioxygenase N terminus AMK01_RS11770 PF00775 Dioxygenase AMK01_RS11775 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK01_RS11780 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK01_RS11800 PF00462 Glutaredoxin AMK01_RS11805 PF07690 Major Facilitator Superfamily AMK01_RS11810 PF07690 Major Facilitator Superfamily AMK01_RS11820 PF00459 Inositol monophosphatase family AMK01_RS11825 PF00459 Inositol monophosphatase family AMK01_RS11830 PF01171 PP-loop family AMK01_RS11835 PF04960 Glutaminase AMK01_RS11840 PF01479 S4 domain AMK01_RS11840 PF00163 Ribosomal protein S4/S9 N-terminal domain AMK01_RS11850 PF01177 Asp/Glu/Hydantoin racemase AMK01_RS11855 PF00588 SpoU rRNA Methylase family AMK01_RS11870 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK01_RS11895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AMK01_RS11895 PF02272 DHHA1 domain AMK01_RS11895 PF01411 tRNA synthetases class II (A) AMK01_RS11900 PF00154 recA bacterial DNA recombination protein AMK01_RS11910 PF04227 Indigoidine synthase A like protein AMK01_RS11915 PF00072 Response regulator receiver domain AMK01_RS11915 PF13188 PAS domain AMK01_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS11915 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS11915 PF08448 PAS fold AMK01_RS11930 PF01258 Prokaryotic dksA/traR C4-type zinc finger AMK01_RS11940 PF04317 YcjX-like family, DUF463 AMK01_RS11945 PF05128 Domain of unknown function (DUF697) AMK01_RS11955 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AMK01_RS11965 PF00809 Pterin binding enzyme AMK01_RS11975 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK01_RS12000 PF00768 D-alanyl-D-alanine carboxypeptidase AMK01_RS12000 PF07943 Penicillin-binding protein 5, C-terminal domain AMK01_RS12015 PF00005 ABC transporter AMK01_RS12020 PF02405 Permease MlaE AMK01_RS12025 PF13378 Enolase C-terminal domain-like AMK01_RS12025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMK01_RS12030 PF12832 MFS_1 like family AMK01_RS12050 PF01565 FAD binding domain AMK01_RS12050 PF08031 Berberine and berberine like AMK01_RS12055 PF00390 Malic enzyme, N-terminal domain AMK01_RS12055 PF01515 Phosphate acetyl/butaryl transferase AMK01_RS12055 PF03949 Malic enzyme, NAD binding domain AMK01_RS12060 PF00075 RNase H AMK01_RS12070 PF04542 Sigma-70 region 2 AMK01_RS12070 PF08281 Sigma-70, region 4 AMK01_RS12075 PF03795 YCII-related domain AMK01_RS12085 PF00881 Nitroreductase family AMK01_RS12090 PF00793 DAHP synthetase I family AMK01_RS12095 PF07676 WD40-like Beta Propeller Repeat AMK01_RS12100 PF00795 Carbon-nitrogen hydrolase AMK01_RS12100 PF02540 NAD synthase AMK01_RS12115 PF00664 ABC transporter transmembrane region AMK01_RS12115 PF00005 ABC transporter AMK01_RS12120 PF01474 Class-II DAHP synthetase family AMK01_RS12130 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS12130 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK01_RS12140 PF00708 Acylphosphatase AMK01_RS12150 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AMK01_RS12155 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS12160 PF03734 L,D-transpeptidase catalytic domain AMK01_RS12165 PF00206 Lyase AMK01_RS12165 PF10415 Fumarase C C-terminus AMK01_RS12170 PF17803 Bacterial cadherin-like domain AMK01_RS12175 PF05683 Fumarase C-terminus AMK01_RS12175 PF05681 Fumarate hydratase (Fumerase) AMK01_RS12180 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS12180 PF17158 Membrane-associated sensor, integral membrane domain AMK01_RS12195 PF01047 MarR family AMK01_RS12200 PF06772 Bacterial low temperature requirement A protein (LtrA) AMK01_RS12210 PF04055 Radical SAM superfamily AMK01_RS12210 PF06463 Molybdenum Cofactor Synthesis C AMK01_RS12215 PF01209 ubiE/COQ5 methyltransferase family AMK01_RS12225 PF01032 FecCD transport family AMK01_RS12230 PF00005 ABC transporter AMK01_RS12235 PF04198 Putative sugar-binding domain AMK01_RS12240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMK01_RS12240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMK01_RS12245 PF02779 Transketolase, pyrimidine binding domain AMK01_RS12245 PF02780 Transketolase, C-terminal domain AMK01_RS12250 PF00456 Transketolase, thiamine diphosphate binding domain AMK01_RS12255 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS12260 PF13407 Periplasmic binding protein domain AMK01_RS12265 PF00005 ABC transporter AMK01_RS12290 PF12804 MobA-like NTP transferase domain AMK01_RS12295 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AMK01_RS12300 PF03466 LysR substrate binding domain AMK01_RS12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS12310 PF00248 Aldo/keto reductase family AMK01_RS12315 PF13417 Glutathione S-transferase, N-terminal domain AMK01_RS12320 PF02566 OsmC-like protein AMK01_RS12325 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS12325 PF00672 HAMP domain AMK01_RS12325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS12330 PF00072 Response regulator receiver domain AMK01_RS12330 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS12340 PF17991 Thioredoxin like C-terminal domain AMK01_RS12340 PF02683 Cytochrome C biogenesis protein transmembrane region AMK01_RS12340 PF00578 AhpC/TSA family AMK01_RS12350 PF00691 OmpA family AMK01_RS12350 PF01389 OmpA-like transmembrane domain AMK01_RS12355 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS12360 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS12365 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS12370 PF06233 Usg-like family AMK01_RS12380 PF08241 Methyltransferase domain AMK01_RS12425 PF00296 Luciferase-like monooxygenase AMK01_RS12435 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AMK01_RS12435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK01_RS12450 PF00571 CBS domain AMK01_RS12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS12455 PF03466 LysR substrate binding domain AMK01_RS12460 PF02530 Porin subfamily AMK01_RS12465 PF01037 Lrp/AsnC ligand binding domain AMK01_RS12470 PF03167 Uracil DNA glycosylase superfamily AMK01_RS12480 PF00989 PAS fold AMK01_RS12480 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS12485 PF01219 Prokaryotic diacylglycerol kinase AMK01_RS12490 PF02277 Phosphoribosyltransferase AMK01_RS12495 PF02654 Cobalamin-5-phosphate synthase AMK01_RS12510 PF07690 Major Facilitator Superfamily AMK01_RS12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS12520 PF03466 LysR substrate binding domain AMK01_RS12530 PF01061 ABC-2 type transporter AMK01_RS12535 PF00005 ABC transporter AMK01_RS12545 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AMK01_RS12545 PF04616 Glycosyl hydrolases family 43 AMK01_RS12550 PF00248 Aldo/keto reductase family AMK01_RS12570 PF03459 TOBE domain AMK01_RS12570 PF17912 MalK OB fold domain AMK01_RS12570 PF00005 ABC transporter AMK01_RS12575 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS12580 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS12585 PF01547 Bacterial extracellular solute-binding protein AMK01_RS12605 PF01820 D-ala D-ala ligase N-terminus AMK01_RS12605 PF07478 D-ala D-ala ligase C-terminus AMK01_RS12620 PF01565 FAD binding domain AMK01_RS12620 PF08031 Berberine and berberine like AMK01_RS12625 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMK01_RS12625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK01_RS12630 PF12833 Helix-turn-helix domain AMK01_RS12655 PF00107 Zinc-binding dehydrogenase AMK01_RS12655 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS12660 PF00109 Beta-ketoacyl synthase, N-terminal domain AMK01_RS12660 PF02801 Beta-ketoacyl synthase, C-terminal domain AMK01_RS12670 PF07977 FabA-like domain AMK01_RS12675 PF00550 Phosphopantetheine attachment site AMK01_RS12680 PF13545 Crp-like helix-turn-helix domain AMK01_RS12680 PF00027 Cyclic nucleotide-binding domain AMK01_RS12695 PF03186 CobD/Cbib protein AMK01_RS12700 PF00155 Aminotransferase class I and II AMK01_RS12705 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS12705 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMK01_RS12710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AMK01_RS12715 PF01156 Inosine-uridine preferring nucleoside hydrolase AMK01_RS12720 PF01890 Cobalamin synthesis G C-terminus AMK01_RS12725 PF01925 Sulfite exporter TauE/SafE AMK01_RS12730 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AMK01_RS12735 PF02514 CobN/Magnesium Chelatase AMK01_RS12740 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS12740 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK01_RS12745 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AMK01_RS12750 PF00654 Voltage gated chloride channel AMK01_RS12755 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS12755 PF00672 HAMP domain AMK01_RS12760 PF07685 CobB/CobQ-like glutamine amidotransferase domain AMK01_RS12780 PF03466 LysR substrate binding domain AMK01_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS12785 PF01810 LysE type translocator AMK01_RS12790 PF03466 LysR substrate binding domain AMK01_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS12800 PF03449 Transcription elongation factor, N-terminal AMK01_RS12800 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK01_RS12805 PF02308 MgtC family AMK01_RS12825 PF13533 Biotin-lipoyl like AMK01_RS12840 PF00924 Mechanosensitive ion channel AMK01_RS12875 PF01965 DJ-1/PfpI family AMK01_RS12875 PF12833 Helix-turn-helix domain AMK01_RS12880 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS12880 PF00072 Response regulator receiver domain AMK01_RS12885 PF00072 Response regulator receiver domain AMK01_RS12910 PF00230 Major intrinsic protein AMK01_RS12915 PF03960 ArsC family AMK01_RS12920 PF03358 NADPH-dependent FMN reductase AMK01_RS12935 PF12794 Mechanosensitive ion channel inner membrane domain 1 AMK01_RS12935 PF12795 Mechanosensitive ion channel porin domain AMK01_RS12935 PF00924 Mechanosensitive ion channel AMK01_RS12945 PF00072 Response regulator receiver domain AMK01_RS12945 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS12950 PF07690 Major Facilitator Superfamily AMK01_RS12960 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS12965 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS12975 PF17912 MalK OB fold domain AMK01_RS12975 PF00005 ABC transporter AMK01_RS12980 PF00005 ABC transporter AMK01_RS12980 PF08402 TOBE domain AMK01_RS12985 PF02734 DAK2 domain AMK01_RS12985 PF02733 Dak1 domain AMK01_RS12990 PF02734 DAK2 domain AMK01_RS12995 PF03610 PTS system fructose IIA component AMK01_RS13005 PF05524 PEP-utilising enzyme, N-terminal AMK01_RS13005 PF02896 PEP-utilising enzyme, TIM barrel domain AMK01_RS13005 PF00391 PEP-utilising enzyme, mobile domain AMK01_RS13015 PF02733 Dak1 domain AMK01_RS13025 PF01047 MarR family AMK01_RS13030 PF00293 NUDIX domain AMK01_RS13040 PF02566 OsmC-like protein AMK01_RS13045 PF08241 Methyltransferase domain AMK01_RS13050 PF01494 FAD binding domain AMK01_RS13070 PF08269 Cache domain AMK01_RS13070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS13070 PF08269 Cache domain AMK01_RS13070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS13080 PF03061 Thioesterase superfamily AMK01_RS13100 PF08241 Methyltransferase domain AMK01_RS13105 PF05368 NmrA-like family AMK01_RS13110 PF03466 LysR substrate binding domain AMK01_RS13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS13120 PF00072 Response regulator receiver domain AMK01_RS13125 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMK01_RS13140 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS13145 PF05656 Protein of unknown function (DUF805) AMK01_RS13155 PF00271 Helicase conserved C-terminal domain AMK01_RS13155 PF04851 Type III restriction enzyme, res subunit AMK01_RS13155 PF02151 UvrB/uvrC motif AMK01_RS13155 PF12344 Ultra-violet resistance protein B AMK01_RS13155 PF17757 UvrB interaction domain AMK01_RS13170 PF02586 SOS response associated peptidase (SRAP) AMK01_RS13175 PF00583 Acetyltransferase (GNAT) family AMK01_RS13175 PF13508 Acetyltransferase (GNAT) domain AMK01_RS13190 PF00313 'Cold-shock' DNA-binding domain AMK01_RS13195 PF01207 Dihydrouridine synthase (Dus) AMK01_RS13200 PF13180 PDZ domain AMK01_RS13205 PF00561 alpha/beta hydrolase fold AMK01_RS13215 PF07886 BA14K-like protein AMK01_RS13230 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS13230 PF00672 HAMP domain AMK01_RS13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS13235 PF00072 Response regulator receiver domain AMK01_RS13235 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS13245 PF01638 HxlR-like helix-turn-helix AMK01_RS13260 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS13270 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS13285 PF05661 Protein of unknown function (DUF808) AMK01_RS13295 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS13300 PF00764 Arginosuccinate synthase AMK01_RS13325 PF02423 Ornithine cyclodeaminase/mu-crystallin family AMK01_RS13330 PF00583 Acetyltransferase (GNAT) family AMK01_RS13340 PF12833 Helix-turn-helix domain AMK01_RS13340 PF02311 AraC-like ligand binding domain AMK01_RS13365 PF00999 Sodium/hydrogen exchanger family AMK01_RS13370 PF02705 K+ potassium transporter AMK01_RS13385 PF17803 Bacterial cadherin-like domain AMK01_RS13400 PF00005 ABC transporter AMK01_RS13410 PF12833 Helix-turn-helix domain AMK01_RS13410 PF02311 AraC-like ligand binding domain AMK01_RS13425 PF00510 Cytochrome c oxidase subunit III AMK01_RS13430 PF00510 Cytochrome c oxidase subunit III AMK01_RS13435 PF00115 Cytochrome C and Quinol oxidase polypeptide I AMK01_RS13440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AMK01_RS13445 PF00034 Cytochrome c AMK01_RS13460 PF04273 Putative phosphatase (DUF442) AMK01_RS13460 PF00753 Metallo-beta-lactamase superfamily AMK01_RS13485 PF00091 Tubulin/FtsZ family, GTPase domain AMK01_RS13485 PF12327 FtsZ family, C-terminal domain AMK01_RS13565 PF13407 Periplasmic binding protein domain AMK01_RS13570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS13570 PF14759 Reductase C-terminal AMK01_RS13580 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS13580 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS13580 PF13188 PAS domain AMK01_RS13580 PF00563 EAL domain AMK01_RS13590 PF01209 ubiE/COQ5 methyltransferase family AMK01_RS13595 PF07228 Stage II sporulation protein E (SpoIIE) AMK01_RS13595 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AMK01_RS13620 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS13620 PF17754 MftR C-terminal domain AMK01_RS13630 PF00107 Zinc-binding dehydrogenase AMK01_RS13630 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS13640 PF08533 Beta-galactosidase C-terminal domain AMK01_RS13640 PF08532 Beta-galactosidase trimerisation domain AMK01_RS13640 PF02449 Beta-galactosidase AMK01_RS13645 PF17912 MalK OB fold domain AMK01_RS13645 PF00005 ABC transporter AMK01_RS13650 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS13655 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS13665 PF00480 ROK family AMK01_RS13685 PF00892 EamA-like transporter family AMK01_RS13690 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS13690 PF00155 Aminotransferase class I and II AMK01_RS13695 PF00158 Sigma-54 interaction domain AMK01_RS13695 PF00072 Response regulator receiver domain AMK01_RS13695 PF02954 Bacterial regulatory protein, Fis family AMK01_RS13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS13700 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS13740 PF00296 Luciferase-like monooxygenase AMK01_RS13745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS13745 PF03466 LysR substrate binding domain AMK01_RS13760 PF00672 HAMP domain AMK01_RS13760 PF02743 Cache domain AMK01_RS13760 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS13780 PF00885 6,7-dimethyl-8-ribityllumazine synthase AMK01_RS13795 PF03466 LysR substrate binding domain AMK01_RS13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS13820 PF00072 Response regulator receiver domain AMK01_RS13820 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS13850 PF01557 Fumarylacetoacetate (FAA) hydrolase family AMK01_RS13855 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS13895 PF00950 ABC 3 transport family AMK01_RS13900 PF00005 ABC transporter AMK01_RS13905 PF01297 Zinc-uptake complex component A periplasmic AMK01_RS13910 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS13910 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK01_RS13925 PF03471 Transporter associated domain AMK01_RS13925 PF00571 CBS domain AMK01_RS13925 PF01595 Cyclin M transmembrane N-terminal domain AMK01_RS13930 PF02417 Chromate transporter AMK01_RS13935 PF09828 Chromate resistance exported protein AMK01_RS13955 PF02567 Phenazine biosynthesis-like protein AMK01_RS13975 PF00005 ABC transporter AMK01_RS13975 PF08402 TOBE domain AMK01_RS13980 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS13995 PF01047 MarR family AMK01_RS14000 PF00248 Aldo/keto reductase family AMK01_RS14005 PF10042 Uncharacterized conserved protein (DUF2278) AMK01_RS14010 PF00155 Aminotransferase class I and II AMK01_RS14015 PF01063 Amino-transferase class IV AMK01_RS14045 PF07995 Glucose / Sorbosone dehydrogenase AMK01_RS14065 PF01658 Myo-inositol-1-phosphate synthase AMK01_RS14090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AMK01_RS14090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AMK01_RS14105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMK01_RS14105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMK01_RS14110 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS14115 PF03009 Glycerophosphoryl diester phosphodiesterase family AMK01_RS14120 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14125 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14130 PF13416 Bacterial extracellular solute-binding protein AMK01_RS14135 PF08402 TOBE domain AMK01_RS14135 PF00005 ABC transporter AMK01_RS14150 PF00535 Glycosyl transferase family 2 AMK01_RS14155 PF06719 AraC-type transcriptional regulator N-terminus AMK01_RS14155 PF12833 Helix-turn-helix domain AMK01_RS14160 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS14160 PF00107 Zinc-binding dehydrogenase AMK01_RS14165 PF00679 Elongation factor G C-terminus AMK01_RS14165 PF00009 Elongation factor Tu GTP binding domain AMK01_RS14165 PF03764 Elongation factor G, domain IV AMK01_RS14175 PF01037 Lrp/AsnC ligand binding domain AMK01_RS14180 PF01177 Asp/Glu/Hydantoin racemase AMK01_RS14185 PF00583 Acetyltransferase (GNAT) family AMK01_RS14185 PF01047 MarR family AMK01_RS14190 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS14195 PF07690 Major Facilitator Superfamily AMK01_RS14200 PF01638 HxlR-like helix-turn-helix AMK01_RS14210 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AMK01_RS14215 PF13411 MerR HTH family regulatory protein AMK01_RS14220 PF13538 UvrD-like helicase C-terminal domain AMK01_RS14220 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AMK01_RS14220 PF14490 Helix-hairpin-helix containing domain AMK01_RS14225 PF03466 LysR substrate binding domain AMK01_RS14225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS14245 PF00924 Mechanosensitive ion channel AMK01_RS14260 PF04542 Sigma-70 region 2 AMK01_RS14260 PF08281 Sigma-70, region 4 AMK01_RS14275 PF02211 Nitrile hydratase beta subunit AMK01_RS14280 PF02979 Nitrile hydratase, alpha chain AMK01_RS14295 PF01810 LysE type translocator AMK01_RS14300 PF00248 Aldo/keto reductase family AMK01_RS14305 PF10369 Small subunit of acetolactate synthase AMK01_RS14305 PF01842 ACT domain AMK01_RS14310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK01_RS14310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK01_RS14310 PF00205 Thiamine pyrophosphate enzyme, central domain AMK01_RS14320 PF00701 Dihydrodipicolinate synthetase family AMK01_RS14330 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS14330 PF00155 Aminotransferase class I and II AMK01_RS14345 PF13180 PDZ domain AMK01_RS14345 PF17820 PDZ domain AMK01_RS14350 PF01145 SPFH domain / Band 7 family AMK01_RS14355 PF01145 SPFH domain / Band 7 family AMK01_RS14360 PF00186 Dihydrofolate reductase AMK01_RS14365 PF00303 Thymidylate synthase AMK01_RS14395 PF02913 FAD linked oxidases, C-terminal domain AMK01_RS14395 PF01565 FAD binding domain AMK01_RS14400 PF00248 Aldo/keto reductase family AMK01_RS14410 PF05145 Transition state regulatory protein AbrB AMK01_RS14425 PF13488 Glycine zipper AMK01_RS14425 PF00691 OmpA family AMK01_RS14430 PF00700 Bacterial flagellin C-terminal helical region AMK01_RS14430 PF00669 Bacterial flagellin N-terminal helical region AMK01_RS14435 PF00873 AcrB/AcrD/AcrF family AMK01_RS14440 PF13533 Biotin-lipoyl like AMK01_RS14445 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS14450 PF04293 SpoVR like protein AMK01_RS14455 PF04285 Protein of unknown function (DUF444) AMK01_RS14460 PF06798 PrkA serine protein kinase C-terminal domain AMK01_RS14460 PF08298 PrkA AAA domain AMK01_RS14470 PF00580 UvrD/REP helicase N-terminal domain AMK01_RS14470 PF13361 UvrD-like helicase C-terminal domain AMK01_RS14480 PF00857 Isochorismatase family AMK01_RS14505 PF00557 Metallopeptidase family M24 AMK01_RS14505 PF01321 Creatinase/Prolidase N-terminal domain AMK01_RS14525 PF02630 SCO1/SenC AMK01_RS14530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS14530 PF00672 HAMP domain AMK01_RS14535 PF01584 CheW-like domain AMK01_RS14555 PF01653 NAD-dependent DNA ligase adenylation domain AMK01_RS14555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AMK01_RS14555 PF03120 NAD-dependent DNA ligase OB-fold domain AMK01_RS14555 PF00533 BRCA1 C Terminus (BRCT) domain AMK01_RS14555 PF12826 Helix-hairpin-helix motif AMK01_RS14565 PF02463 RecF/RecN/SMC N terminal domain AMK01_RS14570 PF13525 Outer membrane lipoprotein AMK01_RS14575 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AMK01_RS14580 PF00091 Tubulin/FtsZ family, GTPase domain AMK01_RS14580 PF12327 FtsZ family, C-terminal domain AMK01_RS14585 PF02491 SHS2 domain inserted in FTSA AMK01_RS14590 PF03799 Cell division protein FtsQ AMK01_RS14590 PF08478 POTRA domain, FtsQ-type AMK01_RS14595 PF07478 D-ala D-ala ligase C-terminus AMK01_RS14595 PF01820 D-ala D-ala ligase N-terminus AMK01_RS14600 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS14605 PF01565 FAD binding domain AMK01_RS14605 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AMK01_RS14610 PF08245 Mur ligase middle domain AMK01_RS14610 PF02875 Mur ligase family, glutamate ligase domain AMK01_RS14610 PF01225 Mur ligase family, catalytic domain AMK01_RS14615 PF03033 Glycosyltransferase family 28 N-terminal domain AMK01_RS14615 PF04101 Glycosyltransferase family 28 C-terminal domain AMK01_RS14620 PF01098 Cell cycle protein AMK01_RS14625 PF08245 Mur ligase middle domain AMK01_RS14630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AMK01_RS14630 PF00953 Glycosyl transferase family 4 AMK01_RS14635 PF08245 Mur ligase middle domain AMK01_RS14635 PF02875 Mur ligase family, glutamate ligase domain AMK01_RS14635 PF01225 Mur ligase family, catalytic domain AMK01_RS14640 PF02875 Mur ligase family, glutamate ligase domain AMK01_RS14640 PF08245 Mur ligase middle domain AMK01_RS14640 PF01225 Mur ligase family, catalytic domain AMK01_RS14645 PF03717 Penicillin-binding Protein dimerisation domain AMK01_RS14645 PF00905 Penicillin binding protein transpeptidase domain AMK01_RS14655 PF01795 MraW methylase family AMK01_RS14660 PF02381 MraZ protein, putative antitoxin-like AMK01_RS14685 PF01510 N-acetylmuramoyl-L-alanine amidase AMK01_RS14690 PF00226 DnaJ domain AMK01_RS14690 PF05099 Tellurite resistance protein TerB AMK01_RS14695 PF00365 Phosphofructokinase AMK01_RS14700 PF01810 LysE type translocator AMK01_RS14725 PF01183 Glycosyl hydrolases family 25 AMK01_RS14740 PF02219 Methylenetetrahydrofolate reductase AMK01_RS14745 PF13847 Methyltransferase domain AMK01_RS14745 PF03551 Transcriptional regulator PadR-like family AMK01_RS14750 PF00005 ABC transporter AMK01_RS14750 PF12848 ABC transporter AMK01_RS14760 PF08386 TAP-like protein AMK01_RS14760 PF00561 alpha/beta hydrolase fold AMK01_RS14765 PF00892 EamA-like transporter family AMK01_RS14770 PF02515 CoA-transferase family III AMK01_RS14775 PF00205 Thiamine pyrophosphate enzyme, central domain AMK01_RS14775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AMK01_RS14775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AMK01_RS14780 PF01042 Endoribonuclease L-PSP AMK01_RS14795 PF03734 L,D-transpeptidase catalytic domain AMK01_RS14795 PF01476 LysM domain AMK01_RS14800 PF13614 AAA domain AMK01_RS14805 PF00465 Iron-containing alcohol dehydrogenase AMK01_RS14810 PF00171 Aldehyde dehydrogenase family AMK01_RS14815 PF00120 Glutamine synthetase, catalytic domain AMK01_RS14815 PF03951 Glutamine synthetase, beta-Grasp domain AMK01_RS14830 PF01380 SIS domain AMK01_RS14830 PF01418 Helix-turn-helix domain, rpiR family AMK01_RS14845 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14850 PF08402 TOBE domain AMK01_RS14850 PF00005 ABC transporter AMK01_RS14855 PF00005 ABC transporter AMK01_RS14855 PF08402 TOBE domain AMK01_RS14860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS14860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS14865 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14870 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14880 PF01869 BadF/BadG/BcrA/BcrD ATPase family AMK01_RS14885 PF07702 UTRA domain AMK01_RS14885 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS14900 PF00809 Pterin binding enzyme AMK01_RS14900 PF02965 Vitamin B12 dependent methionine synthase, activation domain AMK01_RS14900 PF02607 B12 binding domain AMK01_RS14900 PF02310 B12 binding domain AMK01_RS14900 PF02574 Homocysteine S-methyltransferase AMK01_RS14910 PF03928 Haem-degrading AMK01_RS14915 PF01613 Flavin reductase like domain AMK01_RS14920 PF01177 Asp/Glu/Hydantoin racemase AMK01_RS14925 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS14940 PF08402 TOBE domain AMK01_RS14940 PF00005 ABC transporter AMK01_RS14980 PF00765 Autoinducer synthase AMK01_RS15015 PF13505 Outer membrane protein beta-barrel domain AMK01_RS15025 PF04402 Protein of unknown function (DUF541) AMK01_RS15040 PF01894 Uncharacterised protein family UPF0047 AMK01_RS15070 PF02311 AraC-like ligand binding domain AMK01_RS15070 PF12833 Helix-turn-helix domain AMK01_RS15075 PF01636 Phosphotransferase enzyme family AMK01_RS15090 PF03979 Sigma-70 factor, region 1.1 AMK01_RS15090 PF00140 Sigma-70 factor, region 1.2 AMK01_RS15090 PF04542 Sigma-70 region 2 AMK01_RS15090 PF04546 Sigma-70, non-essential region AMK01_RS15090 PF04539 Sigma-70 region 3 AMK01_RS15090 PF04545 Sigma-70, region 4 AMK01_RS15100 PF00107 Zinc-binding dehydrogenase AMK01_RS15100 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS15105 PF00155 Aminotransferase class I and II AMK01_RS15110 PF09382 RQC domain AMK01_RS15110 PF16124 RecQ zinc-binding AMK01_RS15110 PF00570 HRDC domain AMK01_RS15110 PF00271 Helicase conserved C-terminal domain AMK01_RS15110 PF00270 DEAD/DEAH box helicase AMK01_RS15115 PF01807 CHC2 zinc finger AMK01_RS15115 PF08275 DNA primase catalytic core, N-terminal domain AMK01_RS15115 PF08278 DNA primase DnaG DnaB-binding AMK01_RS15115 PF10410 DnaB-helicase binding domain of primase AMK01_RS15130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AMK01_RS15130 PF00117 Glutamine amidotransferase class-I AMK01_RS15135 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS15145 PF01554 MatE AMK01_RS15150 PF07690 Major Facilitator Superfamily AMK01_RS15155 PF00248 Aldo/keto reductase family AMK01_RS15160 PF04228 Putative neutral zinc metallopeptidase AMK01_RS15165 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS15165 PF00107 Zinc-binding dehydrogenase AMK01_RS15170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMK01_RS15170 PF02142 MGS-like domain AMK01_RS15170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK01_RS15185 PF01272 Transcription elongation factor, GreA/GreB, C-term AMK01_RS15185 PF03449 Transcription elongation factor, N-terminal AMK01_RS15190 PF00534 Glycosyl transferases group 1 AMK01_RS15195 PF00375 Sodium:dicarboxylate symporter family AMK01_RS15200 PF02743 Cache domain AMK01_RS15200 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS15205 PF02954 Bacterial regulatory protein, Fis family AMK01_RS15205 PF00072 Response regulator receiver domain AMK01_RS15205 PF00158 Sigma-54 interaction domain AMK01_RS15210 PF01037 Lrp/AsnC ligand binding domain AMK01_RS15215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS15220 PF03466 LysR substrate binding domain AMK01_RS15220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS15230 PF07690 Major Facilitator Superfamily AMK01_RS15235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AMK01_RS15240 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AMK01_RS15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS15250 PF03466 LysR substrate binding domain AMK01_RS15255 PF04229 GrpB protein AMK01_RS15255 PF13673 Acetyltransferase (GNAT) domain AMK01_RS15265 PF01699 Sodium/calcium exchanger protein AMK01_RS15280 PF08437 Glycosyl transferase family 8 C-terminal AMK01_RS15280 PF01501 Glycosyl transferase family 8 AMK01_RS15290 PF00155 Aminotransferase class I and II AMK01_RS15310 PF07995 Glucose / Sorbosone dehydrogenase AMK01_RS15325 PF00313 'Cold-shock' DNA-binding domain AMK01_RS15335 PF00672 HAMP domain AMK01_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS15335 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS15340 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS15340 PF00072 Response regulator receiver domain AMK01_RS15345 PF12802 MarR family AMK01_RS15365 PF00753 Metallo-beta-lactamase superfamily AMK01_RS15370 PF01588 Putative tRNA binding domain AMK01_RS15375 PF03807 NADP oxidoreductase coenzyme F420-dependent AMK01_RS15375 PF14748 Pyrroline-5-carboxylate reductase dimerisation AMK01_RS15390 PF01790 Prolipoprotein diacylglyceryl transferase AMK01_RS15400 PF02578 Multi-copper polyphenol oxidoreductase laccase AMK01_RS15415 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AMK01_RS15415 PF14572 Phosphoribosyl synthetase-associated domain AMK01_RS15425 PF01386 Ribosomal L25p family AMK01_RS15425 PF14693 Ribosomal protein TL5, C-terminal domain AMK01_RS15430 PF13188 PAS domain AMK01_RS15430 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS15430 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS15430 PF00563 EAL domain AMK01_RS15440 PF01195 Peptidyl-tRNA hydrolase AMK01_RS15450 PF02617 ATP-dependent Clp protease adaptor protein ClpS AMK01_RS15455 PF06071 Protein of unknown function (DUF933) AMK01_RS15455 PF01926 50S ribosome-binding GTPase AMK01_RS15475 PF00156 Phosphoribosyl transferase domain AMK01_RS15480 PF00033 Cytochrome b/b6/petB AMK01_RS15480 PF02167 Cytochrome C1 family AMK01_RS15480 PF00032 Cytochrome b(C-terminal)/b6/petD AMK01_RS15485 PF00032 Cytochrome b(C-terminal)/b6/petD AMK01_RS15485 PF00033 Cytochrome b/b6/petB AMK01_RS15490 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AMK01_RS15490 PF00355 Rieske [2Fe-2S] domain AMK01_RS15500 PF00664 ABC transporter transmembrane region AMK01_RS15500 PF00005 ABC transporter AMK01_RS15510 PF00005 ABC transporter AMK01_RS15510 PF00664 ABC transporter transmembrane region AMK01_RS15515 PF00588 SpoU rRNA Methylase family AMK01_RS15520 PF02690 Na+/Pi-cotransporter AMK01_RS15530 PF01218 Coproporphyrinogen III oxidase AMK01_RS15545 PF13735 tRNA nucleotidyltransferase domain 2 putative AMK01_RS15545 PF12627 Probable RNA and SrmB- binding site of polymerase A AMK01_RS15545 PF01743 Poly A polymerase head domain AMK01_RS15550 PF00293 NUDIX domain AMK01_RS15560 PF17863 AAA lid domain AMK01_RS15560 PF07726 ATPase family associated with various cellular activities (AAA) AMK01_RS15580 PF00583 Acetyltransferase (GNAT) family AMK01_RS15590 PF13409 Glutathione S-transferase, N-terminal domain AMK01_RS15595 PF00293 NUDIX domain AMK01_RS15595 PF13344 Haloacid dehalogenase-like hydrolase AMK01_RS15620 PF08502 LeuA allosteric (dimerisation) domain AMK01_RS15620 PF00682 HMGL-like AMK01_RS15625 PF03594 Benzoate membrane transport protein AMK01_RS15630 PF00574 Clp protease AMK01_RS15635 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) AMK01_RS15640 PF14489 QueF-like protein AMK01_RS15645 PF01545 Cation efflux family AMK01_RS15645 PF16916 Dimerisation domain of Zinc Transporter AMK01_RS15660 PF00117 Glutamine amidotransferase class-I AMK01_RS15660 PF04715 Anthranilate synthase component I, N terminal region AMK01_RS15660 PF00425 chorismate binding enzyme AMK01_RS15675 PF01268 Formate--tetrahydrofolate ligase AMK01_RS15685 PF03472 Autoinducer binding domain AMK01_RS15685 PF00196 Bacterial regulatory proteins, luxR family AMK01_RS15705 PF00265 Thymidine kinase AMK01_RS15715 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS15720 PF00005 ABC transporter AMK01_RS15720 PF00571 CBS domain AMK01_RS15730 PF01022 Bacterial regulatory protein, arsR family AMK01_RS15735 PF00202 Aminotransferase class-III AMK01_RS15740 PF01966 HD domain AMK01_RS15740 PF11871 Domain of unknown function (DUF3391) AMK01_RS15745 PF13458 Periplasmic binding protein AMK01_RS15755 PF13382 Adenine deaminase C-terminal domain AMK01_RS15755 PF01979 Amidohydrolase family AMK01_RS15760 PF00128 Alpha amylase, catalytic domain AMK01_RS15765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS15770 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS15775 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK01_RS15775 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS15780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS15780 PF00005 ABC transporter AMK01_RS15785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS15785 PF00005 ABC transporter AMK01_RS15795 PF00294 pfkB family carbohydrate kinase AMK01_RS15800 PF10931 Protein of unknown function (DUF2735) AMK01_RS15805 PF03951 Glutamine synthetase, beta-Grasp domain AMK01_RS15805 PF00120 Glutamine synthetase, catalytic domain AMK01_RS15815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AMK01_RS15815 PF01926 50S ribosome-binding GTPase AMK01_RS15835 PF05992 SbmA/BacA-like family AMK01_RS15855 PF00557 Metallopeptidase family M24 AMK01_RS15870 PF04542 Sigma-70 region 2 AMK01_RS15870 PF08281 Sigma-70, region 4 AMK01_RS15875 PF03795 YCII-related domain AMK01_RS15885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMK01_RS15885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMK01_RS15895 PF00111 2Fe-2S iron-sulfur cluster binding domain AMK01_RS15895 PF01799 [2Fe-2S] binding domain AMK01_RS15900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AMK01_RS15900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMK01_RS15915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS15915 PF03466 LysR substrate binding domain AMK01_RS15930 PF01979 Amidohydrolase family AMK01_RS15935 PF01070 FMN-dependent dehydrogenase AMK01_RS15945 PF00782 Dual specificity phosphatase, catalytic domain AMK01_RS15950 PF12146 Serine aminopeptidase, S33 AMK01_RS15950 PF12147 Putative methyltransferase AMK01_RS15955 PF01066 CDP-alcohol phosphatidyltransferase AMK01_RS15960 PF04012 PspA/IM30 family AMK01_RS15970 PF01145 SPFH domain / Band 7 family AMK01_RS15970 PF15975 Flotillin AMK01_RS15980 PF00576 HIUase/Transthyretin family AMK01_RS15985 PF04115 Ureidoglycolate lyase AMK01_RS16010 PF01266 FAD dependent oxidoreductase AMK01_RS16015 PF01266 FAD dependent oxidoreductase AMK01_RS16015 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AMK01_RS16020 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS16020 PF00072 Response regulator receiver domain AMK01_RS16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS16020 PF00672 HAMP domain AMK01_RS16020 PF01627 Hpt domain AMK01_RS16020 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AMK01_RS16030 PF07690 Major Facilitator Superfamily AMK01_RS16035 PF00701 Dihydrodipicolinate synthetase family AMK01_RS16040 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS16045 PF08713 DNA alkylation repair enzyme AMK01_RS16050 PF00270 DEAD/DEAH box helicase AMK01_RS16050 PF00271 Helicase conserved C-terminal domain AMK01_RS16060 PF07690 Major Facilitator Superfamily AMK01_RS16070 PF14403 Circularly permuted ATP-grasp type 2 AMK01_RS16075 PF14403 Circularly permuted ATP-grasp type 2 AMK01_RS16075 PF04168 A predicted alpha-helical domain with a conserved ER motif. AMK01_RS16095 PF00920 Dehydratase family AMK01_RS16100 PF00171 Aldehyde dehydrogenase family AMK01_RS16110 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS16115 PF00005 ABC transporter AMK01_RS16120 PF13407 Periplasmic binding protein domain AMK01_RS16125 PF03466 LysR substrate binding domain AMK01_RS16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS16145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS16145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS16155 PF13407 Periplasmic binding protein domain AMK01_RS16160 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS16165 PF00005 ABC transporter AMK01_RS16205 PF00669 Bacterial flagellin N-terminal helical region AMK01_RS16205 PF00700 Bacterial flagellin C-terminal helical region AMK01_RS16210 PF02796 Helix-turn-helix domain of resolvase AMK01_RS16210 PF00239 Resolvase, N terminal domain AMK01_RS16255 PF01434 Peptidase family M41 AMK01_RS16255 PF06480 FtsH Extracellular AMK01_RS16255 PF17862 AAA+ lid domain AMK01_RS16255 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS16270 PF06114 IrrE N-terminal-like domain AMK01_RS16375 PF07969 Amidohydrolase family AMK01_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS16390 PF03466 LysR substrate binding domain AMK01_RS16395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS16400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS16400 PF03466 LysR substrate binding domain AMK01_RS16410 PF00027 Cyclic nucleotide-binding domain AMK01_RS16410 PF07885 Ion channel AMK01_RS16415 PF01757 Acyltransferase family AMK01_RS16420 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS16425 PF00355 Rieske [2Fe-2S] domain AMK01_RS16430 PF05951 Bacterial protein of unknown function (DUF882) AMK01_RS16460 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS16465 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS16470 PF00005 ABC transporter AMK01_RS16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS16485 PF03466 LysR substrate binding domain AMK01_RS16490 PF00144 Beta-lactamase AMK01_RS16495 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS16505 PF00535 Glycosyl transferase family 2 AMK01_RS16510 PF00535 Glycosyl transferase family 2 AMK01_RS16515 PF00664 ABC transporter transmembrane region AMK01_RS16515 PF00005 ABC transporter AMK01_RS16520 PF01501 Glycosyl transferase family 8 AMK01_RS16520 PF00535 Glycosyl transferase family 2 AMK01_RS16540 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AMK01_RS16555 PF01381 Helix-turn-helix AMK01_RS16575 PF06452 Carbohydrate family 9 binding domain-like AMK01_RS16575 PF00331 Glycosyl hydrolase family 10 AMK01_RS16575 PF02018 Carbohydrate binding domain AMK01_RS16590 PF04230 Polysaccharide pyruvyl transferase AMK01_RS16610 PF00535 Glycosyl transferase family 2 AMK01_RS16615 PF00535 Glycosyl transferase family 2 AMK01_RS16630 PF01757 Acyltransferase family AMK01_RS16650 PF00529 HlyD membrane-fusion protein of T1SS AMK01_RS16650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK01_RS16655 PF00664 ABC transporter transmembrane region AMK01_RS16655 PF00005 ABC transporter AMK01_RS16665 PF17803 Bacterial cadherin-like domain AMK01_RS16675 PF02706 Chain length determinant protein AMK01_RS16675 PF13807 G-rich domain on putative tyrosine kinase AMK01_RS16675 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AMK01_RS16685 PF02563 Polysaccharide biosynthesis/export protein AMK01_RS16700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AMK01_RS16700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AMK01_RS16700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AMK01_RS16705 PF00149 Calcineurin-like phosphoesterase AMK01_RS16715 PF01738 Dienelactone hydrolase family AMK01_RS16720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AMK01_RS16725 PF03167 Uracil DNA glycosylase superfamily AMK01_RS16730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK01_RS16730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK01_RS16730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK01_RS16730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK01_RS16735 PF01050 Mannose-6-phosphate isomerase AMK01_RS16735 PF00483 Nucleotidyl transferase AMK01_RS16750 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS16760 PF09209 Tetracyclin repressor-like, C-terminal domain AMK01_RS16760 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS16765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK01_RS16770 PF00005 ABC transporter AMK01_RS16790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS16790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS16800 PF00893 Small Multidrug Resistance protein AMK01_RS16810 PF01152 Bacterial-like globin AMK01_RS16820 PF03992 Antibiotic biosynthesis monooxygenase AMK01_RS16835 PF03544 Gram-negative bacterial TonB protein C-terminal AMK01_RS16855 PF04542 Sigma-70 region 2 AMK01_RS16855 PF08281 Sigma-70, region 4 AMK01_RS16865 PF00072 Response regulator receiver domain AMK01_RS16870 PF08447 PAS fold AMK01_RS16870 PF07536 HWE histidine kinase AMK01_RS16870 PF13426 PAS domain AMK01_RS16875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS16875 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMK01_RS16880 PF01180 Dihydroorotate dehydrogenase AMK01_RS16885 PF00128 Alpha amylase, catalytic domain AMK01_RS16885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK01_RS16885 PF11941 Domain of unknown function (DUF3459) AMK01_RS16895 PF00128 Alpha amylase, catalytic domain AMK01_RS16895 PF16657 Maltogenic Amylase, C-terminal domain AMK01_RS16900 PF01965 DJ-1/PfpI family AMK01_RS16900 PF12833 Helix-turn-helix domain AMK01_RS16910 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS16910 PF08362 YcdC-like protein, C-terminal region AMK01_RS16915 PF07687 Peptidase dimerisation domain AMK01_RS16915 PF01546 Peptidase family M20/M25/M40 AMK01_RS16920 PF04480 Protein of unknown function (DUF559) AMK01_RS16925 PF01979 Amidohydrolase family AMK01_RS16935 PF00005 ABC transporter AMK01_RS16940 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS16960 PF00873 AcrB/AcrD/AcrF family AMK01_RS16965 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS16970 PF01730 UreF AMK01_RS16975 PF02814 UreE urease accessory protein, N-terminal domain AMK01_RS16975 PF05194 UreE urease accessory protein, C-terminal domain AMK01_RS16980 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS16990 PF00449 Urease alpha-subunit, N-terminal domain AMK01_RS16990 PF01979 Amidohydrolase family AMK01_RS17000 PF07007 Lysozyme inhibitor LprI AMK01_RS17005 PF00699 Urease beta subunit AMK01_RS17010 PF06906 Protein of unknown function (DUF1272) AMK01_RS17015 PF00547 Urease, gamma subunit AMK01_RS17020 PF01774 UreD urease accessory protein AMK01_RS17025 PF00005 ABC transporter AMK01_RS17035 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK01_RS17035 PF00005 ABC transporter AMK01_RS17045 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS17060 PF00072 Response regulator receiver domain AMK01_RS17060 PF00989 PAS fold AMK01_RS17060 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS17060 PF01627 Hpt domain AMK01_RS17060 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS17065 PF00072 Response regulator receiver domain AMK01_RS17070 PF13458 Periplasmic binding protein AMK01_RS17080 PF00005 ABC transporter AMK01_RS17085 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK01_RS17085 PF00005 ABC transporter AMK01_RS17090 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS17090 PF11862 Domain of unknown function (DUF3382) AMK01_RS17095 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS17100 PF00459 Inositol monophosphatase family AMK01_RS17105 PF02397 Bacterial sugar transferase AMK01_RS17145 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS17145 PF00072 Response regulator receiver domain AMK01_RS17155 PF10090 Histidine phosphotransferase C-terminal domain AMK01_RS17170 PF00588 SpoU rRNA Methylase family AMK01_RS17180 PF00849 RNA pseudouridylate synthase AMK01_RS17185 PF04542 Sigma-70 region 2 AMK01_RS17185 PF04545 Sigma-70, region 4 AMK01_RS17185 PF00140 Sigma-70 factor, region 1.2 AMK01_RS17195 PF00709 Adenylosuccinate synthetase AMK01_RS17210 PF00920 Dehydratase family AMK01_RS17215 PF00873 AcrB/AcrD/AcrF family AMK01_RS17220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK01_RS17225 PF07859 alpha/beta hydrolase fold AMK01_RS17230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS17230 PF03466 LysR substrate binding domain AMK01_RS17240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS17240 PF03466 LysR substrate binding domain AMK01_RS17250 PF02245 Methylpurine-DNA glycosylase (MPG) AMK01_RS17255 PF07690 Major Facilitator Superfamily AMK01_RS17260 PF13533 Biotin-lipoyl like AMK01_RS17270 PF00999 Sodium/hydrogen exchanger family AMK01_RS17275 PF13533 Biotin-lipoyl like AMK01_RS17280 PF00873 AcrB/AcrD/AcrF family AMK01_RS17285 PF00149 Calcineurin-like phosphoesterase AMK01_RS17295 PF02082 Transcriptional regulator AMK01_RS17320 PF00005 ABC transporter AMK01_RS17320 PF17912 MalK OB fold domain AMK01_RS17325 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS17330 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS17335 PF13416 Bacterial extracellular solute-binding protein AMK01_RS17340 PF00480 ROK family AMK01_RS17345 PF01547 Bacterial extracellular solute-binding protein AMK01_RS17350 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS17355 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS17365 PF00294 pfkB family carbohydrate kinase AMK01_RS17370 PF00005 ABC transporter AMK01_RS17370 PF08402 TOBE domain AMK01_RS17380 PF01943 Polysaccharide biosynthesis protein AMK01_RS17385 PF13439 Glycosyltransferase Family 4 AMK01_RS17385 PF00534 Glycosyl transferases group 1 AMK01_RS17390 PF00534 Glycosyl transferases group 1 AMK01_RS17390 PF13439 Glycosyltransferase Family 4 AMK01_RS17400 PF02397 Bacterial sugar transferase AMK01_RS17405 PF13614 AAA domain AMK01_RS17415 PF02563 Polysaccharide biosynthesis/export protein AMK01_RS17445 PF01011 PQQ enzyme repeat AMK01_RS17455 PF07732 Multicopper oxidase AMK01_RS17455 PF07731 Multicopper oxidase AMK01_RS17455 PF00394 Multicopper oxidase AMK01_RS17465 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AMK01_RS17470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AMK01_RS17475 PF00361 Proton-conducting membrane transporter AMK01_RS17485 PF00361 Proton-conducting membrane transporter AMK01_RS17490 PF00361 Proton-conducting membrane transporter AMK01_RS17490 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AMK01_RS17495 PF00361 Proton-conducting membrane transporter AMK01_RS17500 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AMK01_RS17505 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AMK01_RS17510 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AMK01_RS17515 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AMK01_RS17525 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK01_RS17525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMK01_RS17525 PF10531 SLBB domain AMK01_RS17530 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMK01_RS17530 PF01568 Molydopterin dinucleotide binding domain AMK01_RS17530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK01_RS17530 PF12838 4Fe-4S dicluster domain AMK01_RS17530 PF00384 Molybdopterin oxidoreductase AMK01_RS17540 PF12838 4Fe-4S dicluster domain AMK01_RS17545 PF00146 NADH dehydrogenase AMK01_RS17590 PF00849 RNA pseudouridylate synthase AMK01_RS17590 PF01479 S4 domain AMK01_RS17595 PF00156 Phosphoribosyl transferase domain AMK01_RS17600 PF02080 TrkA-C domain AMK01_RS17600 PF03600 Citrate transporter AMK01_RS17605 PF01259 SAICAR synthetase AMK01_RS17610 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS17615 PF00529 HlyD membrane-fusion protein of T1SS AMK01_RS17615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AMK01_RS17620 PF00873 AcrB/AcrD/AcrF family AMK01_RS17625 PF02321 Outer membrane efflux protein AMK01_RS17630 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS17640 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS17645 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS17650 PF08402 TOBE domain AMK01_RS17650 PF00005 ABC transporter AMK01_RS17660 PF13382 Adenine deaminase C-terminal domain AMK01_RS17660 PF01979 Amidohydrolase family AMK01_RS17680 PF00106 short chain dehydrogenase AMK01_RS17685 PF01565 FAD binding domain AMK01_RS17685 PF04030 D-arabinono-1,4-lactone oxidase AMK01_RS17695 PF01040 UbiA prenyltransferase family AMK01_RS17700 PF07687 Peptidase dimerisation domain AMK01_RS17700 PF01546 Peptidase family M20/M25/M40 AMK01_RS17705 PF01970 Tripartite tricarboxylate transporter TctA family AMK01_RS17715 PF03401 Tripartite tricarboxylate transporter family receptor AMK01_RS17720 PF02954 Bacterial regulatory protein, Fis family AMK01_RS17720 PF00072 Response regulator receiver domain AMK01_RS17720 PF00158 Sigma-54 interaction domain AMK01_RS17725 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS17725 PF02743 Cache domain AMK01_RS17725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS17730 PF00174 Oxidoreductase molybdopterin binding domain AMK01_RS17755 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS17755 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS17755 PF00563 EAL domain AMK01_RS17755 PF13188 PAS domain AMK01_RS17760 PF00871 Acetokinase family AMK01_RS17765 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AMK01_RS17765 PF09363 XFP C-terminal domain AMK01_RS17765 PF09364 XFP N-terminal domain AMK01_RS17775 PF01494 FAD binding domain AMK01_RS17780 PF13458 Periplasmic binding protein AMK01_RS17795 PF12399 Branched-chain amino acid ATP-binding cassette transporter AMK01_RS17795 PF00005 ABC transporter AMK01_RS17800 PF00005 ABC transporter AMK01_RS17800 PF12857 TOBE-like domain AMK01_RS17830 PF01842 ACT domain AMK01_RS17830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK01_RS17830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK01_RS17840 PF13505 Outer membrane protein beta-barrel domain AMK01_RS17845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK01_RS17845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK01_RS17845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK01_RS17845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK01_RS17850 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS17850 PF17862 AAA+ lid domain AMK01_RS17850 PF06480 FtsH Extracellular AMK01_RS17850 PF01434 Peptidase family M41 AMK01_RS17855 PF01171 PP-loop family AMK01_RS17865 PF00691 OmpA family AMK01_RS17870 PF04052 TolB amino-terminal domain AMK01_RS17870 PF07676 WD40-like Beta Propeller Repeat AMK01_RS17880 PF02472 Biopolymer transport protein ExbD/TolR AMK01_RS17885 PF01618 MotA/TolQ/ExbB proton channel family AMK01_RS17890 PF03061 Thioesterase superfamily AMK01_RS17895 PF01370 NAD dependent epimerase/dehydratase family AMK01_RS17915 PF13277 YmdB-like protein AMK01_RS17930 PF01709 Transcriptional regulator AMK01_RS17935 PF00296 Luciferase-like monooxygenase AMK01_RS17940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS17940 PF00672 HAMP domain AMK01_RS17945 PF02075 Crossover junction endodeoxyribonuclease RuvC AMK01_RS17960 PF07499 RuvA, C-terminal domain AMK01_RS17960 PF01330 RuvA N terminal domain AMK01_RS17965 PF17864 RuvB AAA lid domain AMK01_RS17965 PF05491 RuvB C-terminal winged helix domain AMK01_RS17965 PF05496 Holliday junction DNA helicase RuvB P-loop domain AMK01_RS17970 PF00149 Calcineurin-like phosphoesterase AMK01_RS17975 PF00293 NUDIX domain AMK01_RS17980 PF05163 DinB family AMK01_RS17990 PF03706 Lysylphosphatidylglycerol synthase TM region AMK01_RS17990 PF09924 Uncharacterised conserved protein (DUF2156) AMK01_RS18000 PF00924 Mechanosensitive ion channel AMK01_RS18005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AMK01_RS18005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AMK01_RS18050 PF02780 Transketolase, C-terminal domain AMK01_RS18050 PF02779 Transketolase, pyrimidine binding domain AMK01_RS18050 PF00456 Transketolase, thiamine diphosphate binding domain AMK01_RS18055 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMK01_RS18055 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AMK01_RS18065 PF03471 Transporter associated domain AMK01_RS18065 PF00999 Sodium/hydrogen exchanger family AMK01_RS18070 PF00162 Phosphoglycerate kinase AMK01_RS18075 PF00274 Fructose-bisphosphate aldolase class-I AMK01_RS18080 PF02567 Phenazine biosynthesis-like protein AMK01_RS18100 PF01197 Ribosomal protein L31 AMK01_RS18105 PF00005 ABC transporter AMK01_RS18105 PF00664 ABC transporter transmembrane region AMK01_RS18110 PF03401 Tripartite tricarboxylate transporter family receptor AMK01_RS18115 PF07411 Domain of unknown function (DUF1508) AMK01_RS18140 PF00459 Inositol monophosphatase family AMK01_RS18145 PF00072 Response regulator receiver domain AMK01_RS18145 PF01339 CheB methylesterase AMK01_RS18150 PF01739 CheR methyltransferase, SAM binding domain AMK01_RS18150 PF03705 CheR methyltransferase, all-alpha domain AMK01_RS18155 PF01584 CheW-like domain AMK01_RS18160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS18160 PF00672 HAMP domain AMK01_RS18165 PF12729 Four helix bundle sensory module for signal transduction AMK01_RS18165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS18165 PF00672 HAMP domain AMK01_RS18170 PF01584 CheW-like domain AMK01_RS18175 PF01584 CheW-like domain AMK01_RS18175 PF09078 CheY binding AMK01_RS18175 PF02895 Signal transducing histidine kinase, homodimeric domain AMK01_RS18175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS18175 PF01627 Hpt domain AMK01_RS18180 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS18180 PF00072 Response regulator receiver domain AMK01_RS18210 PF01022 Bacterial regulatory protein, arsR family AMK01_RS18225 PF00731 AIR carboxylase AMK01_RS18230 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AMK01_RS18230 PF02222 ATP-grasp domain AMK01_RS18235 PF00444 Ribosomal protein L36 AMK01_RS18255 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS18260 PF03466 LysR substrate binding domain AMK01_RS18260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS18265 PF14552 Tautomerase enzyme AMK01_RS18275 PF01810 LysE type translocator AMK01_RS18280 PF02887 Pyruvate kinase, alpha/beta domain AMK01_RS18280 PF00224 Pyruvate kinase, barrel domain AMK01_RS18300 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) AMK01_RS18305 PF05951 Bacterial protein of unknown function (DUF882) AMK01_RS18310 PF00158 Sigma-54 interaction domain AMK01_RS18310 PF00072 Response regulator receiver domain AMK01_RS18310 PF02954 Bacterial regulatory protein, Fis family AMK01_RS18320 PF04715 Anthranilate synthase component I, N terminal region AMK01_RS18320 PF00117 Glutamine amidotransferase class-I AMK01_RS18320 PF00425 chorismate binding enzyme AMK01_RS18335 PF16653 Saccharopine dehydrogenase C-terminal domain AMK01_RS18335 PF03435 Saccharopine dehydrogenase NADP binding domain AMK01_RS18340 PF00149 Calcineurin-like phosphoesterase AMK01_RS18340 PF02872 5'-nucleotidase, C-terminal domain AMK01_RS18345 PF00762 Ferrochelatase AMK01_RS18350 PF01145 SPFH domain / Band 7 family AMK01_RS18350 PF16200 C-terminal region of band_7 AMK01_RS18360 PF01380 SIS domain AMK01_RS18360 PF00571 CBS domain AMK01_RS18370 PF00483 Nucleotidyl transferase AMK01_RS18375 PF13406 Transglycosylase SLT domain AMK01_RS18390 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS18390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMK01_RS18395 PF01493 GXGXG motif AMK01_RS18395 PF04898 Glutamate synthase central domain AMK01_RS18395 PF01645 Conserved region in glutamate synthase AMK01_RS18395 PF00310 Glutamine amidotransferases class-II AMK01_RS18400 PF01212 Beta-eliminating lyase AMK01_RS18405 PF03466 LysR substrate binding domain AMK01_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS18410 PF13593 SBF-like CPA transporter family (DUF4137) AMK01_RS18415 PF00011 Hsp20/alpha crystallin family AMK01_RS18425 PF00459 Inositol monophosphatase family AMK01_RS18435 PF00072 Response regulator receiver domain AMK01_RS18450 PF02530 Porin subfamily AMK01_RS18480 PF01970 Tripartite tricarboxylate transporter TctA family AMK01_RS18490 PF03401 Tripartite tricarboxylate transporter family receptor AMK01_RS18500 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS18505 PF00072 Response regulator receiver domain AMK01_RS18505 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS18510 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS18520 PF04168 A predicted alpha-helical domain with a conserved ER motif. AMK01_RS18520 PF14403 Circularly permuted ATP-grasp type 2 AMK01_RS18525 PF01841 Transglutaminase-like superfamily AMK01_RS18525 PF08379 Bacterial transglutaminase-like N-terminal region AMK01_RS18535 PF00343 Carbohydrate phosphorylase AMK01_RS18540 PF02806 Alpha amylase, C-terminal all-beta domain AMK01_RS18540 PF00128 Alpha amylase, catalytic domain AMK01_RS18540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK01_RS18545 PF00483 Nucleotidyl transferase AMK01_RS18550 PF00534 Glycosyl transferases group 1 AMK01_RS18550 PF08323 Starch synthase catalytic domain AMK01_RS18555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AMK01_RS18555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AMK01_RS18555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AMK01_RS18555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AMK01_RS18560 PF18390 Glycogen debranching enzyme C-terminal domain AMK01_RS18560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AMK01_RS18560 PF00128 Alpha amylase, catalytic domain AMK01_RS18565 PF01575 MaoC like domain AMK01_RS18580 PF17806 Sarcosine oxidase A3 domain AMK01_RS18580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS18580 PF01571 Aminomethyltransferase folate-binding domain AMK01_RS18580 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK01_RS18590 PF01266 FAD dependent oxidoreductase AMK01_RS18600 PF00072 Response regulator receiver domain AMK01_RS18600 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS18610 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS18615 PF01165 Ribosomal protein S21 AMK01_RS18625 PF07536 HWE histidine kinase AMK01_RS18625 PF08447 PAS fold AMK01_RS18625 PF13426 PAS domain AMK01_RS18635 PF02233 NAD(P) transhydrogenase beta subunit AMK01_RS18640 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AMK01_RS18645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AMK01_RS18645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AMK01_RS18660 PF08448 PAS fold AMK01_RS18660 PF08447 PAS fold AMK01_RS18660 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS18660 PF00563 EAL domain AMK01_RS18670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AMK01_RS18675 PF03480 Bacterial extracellular solute-binding protein, family 7 AMK01_RS18680 PF07722 Peptidase C26 AMK01_RS18685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMK01_RS18685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AMK01_RS18690 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS18695 PF01047 MarR family AMK01_RS18700 PF02633 Creatinine amidohydrolase AMK01_RS18705 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS18705 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK01_RS18720 PF00132 Bacterial transferase hexapeptide (six repeats) AMK01_RS18720 PF06426 Serine acetyltransferase, N-terminal AMK01_RS18725 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS18725 PF08448 PAS fold AMK01_RS18740 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMK01_RS18740 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMK01_RS18745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS18745 PF03466 LysR substrate binding domain AMK01_RS18775 PF01081 KDPG and KHG aldolase AMK01_RS18780 PF01928 CYTH domain AMK01_RS18790 PF00581 Rhodanese-like domain AMK01_RS18790 PF17773 UPF0176 acylphosphatase like domain AMK01_RS18795 PF00563 EAL domain AMK01_RS18795 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS18795 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS18800 PF00232 Glycosyl hydrolase family 1 AMK01_RS18810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS18810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS18820 PF13407 Periplasmic binding protein domain AMK01_RS18825 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS18830 PF00005 ABC transporter AMK01_RS18835 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS18840 PF01261 Xylose isomerase-like TIM barrel AMK01_RS18845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMK01_RS18845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMK01_RS18850 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS18855 PF07690 Major Facilitator Superfamily AMK01_RS18860 PF13533 Biotin-lipoyl like AMK01_RS18865 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS18870 PF12833 Helix-turn-helix domain AMK01_RS18875 PF03741 Integral membrane protein TerC family AMK01_RS18875 PF03471 Transporter associated domain AMK01_RS18880 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK01_RS18885 PF00152 tRNA synthetases class II (D, K and N) AMK01_RS18885 PF01336 OB-fold nucleic acid binding domain AMK01_RS18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS18895 PF03466 LysR substrate binding domain AMK01_RS18900 PF13416 Bacterial extracellular solute-binding protein AMK01_RS18905 PF00005 ABC transporter AMK01_RS18905 PF08402 TOBE domain AMK01_RS18910 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS18915 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS18920 PF00171 Aldehyde dehydrogenase family AMK01_RS18940 PF00753 Metallo-beta-lactamase superfamily AMK01_RS18940 PF12706 Beta-lactamase superfamily domain AMK01_RS18945 PF04542 Sigma-70 region 2 AMK01_RS18945 PF08281 Sigma-70, region 4 AMK01_RS18960 PF00923 Transaldolase/Fructose-6-phosphate aldolase AMK01_RS18965 PF13936 Helix-turn-helix domain AMK01_RS18965 PF04198 Putative sugar-binding domain AMK01_RS18970 PF02805 Metal binding domain of Ada AMK01_RS18970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AMK01_RS18970 PF12833 Helix-turn-helix domain AMK01_RS18970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AMK01_RS18980 PF10576 Iron-sulfur binding domain of endonuclease III AMK01_RS18980 PF00633 Helix-hairpin-helix motif AMK01_RS18980 PF00730 HhH-GPD superfamily base excision DNA repair protein AMK01_RS18995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AMK01_RS18995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AMK01_RS19000 PF13419 Haloacid dehalogenase-like hydrolase AMK01_RS19005 PF01232 Mannitol dehydrogenase Rossmann domain AMK01_RS19005 PF08125 Mannitol dehydrogenase C-terminal domain AMK01_RS19010 PF08402 TOBE domain AMK01_RS19010 PF00005 ABC transporter AMK01_RS19015 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19020 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19040 PF00480 ROK family AMK01_RS19045 PF00728 Glycosyl hydrolase family 20, catalytic domain AMK01_RS19045 PF02838 Glycosyl hydrolase family 20, domain 2 AMK01_RS19050 PF00873 AcrB/AcrD/AcrF family AMK01_RS19065 PF02566 OsmC-like protein AMK01_RS19080 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS19085 PF00005 ABC transporter AMK01_RS19090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AMK01_RS19095 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS19095 PF07729 FCD domain AMK01_RS19100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AMK01_RS19100 PF13378 Enolase C-terminal domain-like AMK01_RS19115 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS19120 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS19135 PF08450 SMP-30/Gluconolactonase/LRE-like region AMK01_RS19140 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AMK01_RS19140 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AMK01_RS19140 PF00703 Glycosyl hydrolases family 2 AMK01_RS19145 PF17912 MalK OB fold domain AMK01_RS19145 PF00005 ABC transporter AMK01_RS19150 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19155 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19160 PF01547 Bacterial extracellular solute-binding protein AMK01_RS19165 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS19170 PF06508 Queuosine biosynthesis protein QueC AMK01_RS19175 PF01242 6-pyruvoyl tetrahydropterin synthase AMK01_RS19180 PF04055 Radical SAM superfamily AMK01_RS19185 PF00211 Adenylate and Guanylate cyclase catalytic domain AMK01_RS19190 PF00268 Ribonucleotide reductase, small chain AMK01_RS19195 PF00317 Ribonucleotide reductase, all-alpha domain AMK01_RS19195 PF08343 Ribonucleotide reductase N-terminal AMK01_RS19195 PF02867 Ribonucleotide reductase, barrel domain AMK01_RS19200 PF07972 NrdI Flavodoxin like AMK01_RS19210 PF00403 Heavy-metal-associated domain AMK01_RS19215 PF13411 MerR HTH family regulatory protein AMK01_RS19220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK01_RS19220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS19220 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AMK01_RS19225 PF00158 Sigma-54 interaction domain AMK01_RS19225 PF13426 PAS domain AMK01_RS19225 PF02954 Bacterial regulatory protein, Fis family AMK01_RS19230 PF00171 Aldehyde dehydrogenase family AMK01_RS19240 PF01965 DJ-1/PfpI family AMK01_RS19250 PF00106 short chain dehydrogenase AMK01_RS19255 PF01699 Sodium/calcium exchanger protein AMK01_RS19290 PF08460 Bacterial SH3 domain AMK01_RS19290 PF01551 Peptidase family M23 AMK01_RS19295 PF00004 ATPase family associated with various cellular activities (AAA) AMK01_RS19295 PF07724 AAA domain (Cdc48 subfamily) AMK01_RS19295 PF17871 AAA lid domain AMK01_RS19295 PF02861 Clp amino terminal domain, pathogenicity island component AMK01_RS19295 PF10431 C-terminal, D2-small domain, of ClpB protein AMK01_RS19305 PF05175 Methyltransferase small domain AMK01_RS19305 PF17827 PrmC N-terminal domain AMK01_RS19310 PF03462 PCRF domain AMK01_RS19310 PF00472 RF-1 domain AMK01_RS19315 PF00391 PEP-utilising enzyme, mobile domain AMK01_RS19315 PF01590 GAF domain AMK01_RS19315 PF02896 PEP-utilising enzyme, TIM barrel domain AMK01_RS19315 PF05524 PEP-utilising enzyme, N-terminal AMK01_RS19320 PF00696 Amino acid kinase family AMK01_RS19320 PF13840 ACT domain AMK01_RS19320 PF01842 ACT domain AMK01_RS19335 PF00795 Carbon-nitrogen hydrolase AMK01_RS19340 PF00462 Glutaredoxin AMK01_RS19345 PF00156 Phosphoribosyl transferase domain AMK01_RS19350 PF08241 Methyltransferase domain AMK01_RS19350 PF12697 Alpha/beta hydrolase family AMK01_RS19365 PF00293 NUDIX domain AMK01_RS19375 PF01960 ArgJ family AMK01_RS19385 PF07516 SecA Wing and Scaffold domain AMK01_RS19385 PF01043 SecA preprotein cross-linking domain AMK01_RS19385 PF07517 SecA DEAD-like domain AMK01_RS19385 PF02810 SEC-C motif AMK01_RS19400 PF00501 AMP-binding enzyme AMK01_RS19400 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS19405 PF00248 Aldo/keto reductase family AMK01_RS19435 PF00999 Sodium/hydrogen exchanger family AMK01_RS19435 PF02254 TrkA-N domain AMK01_RS19465 PF00749 tRNA synthetases class I (E and Q), catalytic domain AMK01_RS19475 PF00106 short chain dehydrogenase AMK01_RS19485 PF01923 Cobalamin adenosyltransferase AMK01_RS19495 PF01012 Electron transfer flavoprotein domain AMK01_RS19500 PF00766 Electron transfer flavoprotein FAD-binding domain AMK01_RS19500 PF01012 Electron transfer flavoprotein domain AMK01_RS19505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AMK01_RS19505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AMK01_RS19510 PF08534 Redoxin AMK01_RS19515 PF14698 Argininosuccinate lyase C-terminal AMK01_RS19515 PF00206 Lyase AMK01_RS19525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AMK01_RS19525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AMK01_RS19535 PF00072 Response regulator receiver domain AMK01_RS19540 PF01171 PP-loop family AMK01_RS19540 PF00156 Phosphoribosyl transferase domain AMK01_RS19540 PF11734 TilS substrate C-terminal domain AMK01_RS19550 PF00005 ABC transporter AMK01_RS19570 PF04752 ChaC-like protein AMK01_RS19585 PF02153 Prephenate dehydrogenase AMK01_RS19590 PF00155 Aminotransferase class I and II AMK01_RS19595 PF01209 ubiE/COQ5 methyltransferase family AMK01_RS19600 PF00753 Metallo-beta-lactamase superfamily AMK01_RS19600 PF16123 Hydroxyacylglutathione hydrolase C-terminus AMK01_RS19620 PF00830 Ribosomal L28 family AMK01_RS19640 PF06213 Cobalamin biosynthesis protein CobT AMK01_RS19640 PF11775 Cobalamin biosynthesis protein CobT VWA domain AMK01_RS19645 PF07728 AAA domain (dynein-related subfamily) AMK01_RS19645 PF12556 Cobaltochelatase CobS subunit N terminal AMK01_RS19645 PF08406 CbbQ/NirQ/NorQ C-terminal AMK01_RS19650 PF00226 DnaJ domain AMK01_RS19655 PF01722 BolA-like protein AMK01_RS19660 PF01595 Cyclin M transmembrane N-terminal domain AMK01_RS19660 PF03471 Transporter associated domain AMK01_RS19660 PF00571 CBS domain AMK01_RS19665 PF01761 3-dehydroquinate synthase AMK01_RS19670 PF01202 Shikimate kinase AMK01_RS19675 PF00589 Phage integrase family AMK01_RS19675 PF02899 Phage integrase, N-terminal SAM-like domain AMK01_RS19680 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AMK01_RS19685 PF03734 L,D-transpeptidase catalytic domain AMK01_RS19690 PF01206 Sulfurtransferase TusA AMK01_RS19695 PF02492 CobW/HypB/UreG, nucleotide-binding domain AMK01_RS19695 PF07683 Cobalamin synthesis protein cobW C-terminal domain AMK01_RS19700 PF07943 Penicillin-binding protein 5, C-terminal domain AMK01_RS19700 PF00768 D-alanyl-D-alanine carboxypeptidase AMK01_RS19705 PF07687 Peptidase dimerisation domain AMK01_RS19705 PF01546 Peptidase family M20/M25/M40 AMK01_RS19740 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AMK01_RS19740 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMK01_RS19740 PF13288 DXP reductoisomerase C-terminal domain AMK01_RS19745 PF00005 ABC transporter AMK01_RS19745 PF17912 MalK OB fold domain AMK01_RS19750 PF07944 Beta-L-arabinofuranosidase, GH127 AMK01_RS19755 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19760 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19765 PF01547 Bacterial extracellular solute-binding protein AMK01_RS19770 PF00356 Bacterial regulatory proteins, lacI family AMK01_RS19775 PF00155 Aminotransferase class I and II AMK01_RS19785 PF07244 Surface antigen variable number repeat AMK01_RS19785 PF01103 Surface antigen AMK01_RS19785 PF17243 POTRA domain TamA domain 1 AMK01_RS19800 PF00491 Arginase family AMK01_RS19805 PF00202 Aminotransferase class-III AMK01_RS19810 PF01584 CheW-like domain AMK01_RS19815 PF07690 Major Facilitator Superfamily AMK01_RS19825 PF02634 FdhD/NarQ family AMK01_RS19830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AMK01_RS19830 PF00384 Molybdopterin oxidoreductase AMK01_RS19830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMK01_RS19830 PF01568 Molydopterin dinucleotide binding domain AMK01_RS19830 PF00037 4Fe-4S binding domain AMK01_RS19835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AMK01_RS19835 PF00037 4Fe-4S binding domain AMK01_RS19835 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMK01_RS19845 PF03466 LysR substrate binding domain AMK01_RS19845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS19850 PF01022 Bacterial regulatory protein, arsR family AMK01_RS19860 PF00376 MerR family regulatory protein AMK01_RS19860 PF09278 MerR, DNA binding AMK01_RS19865 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS19870 PF00005 ABC transporter AMK01_RS19875 PF09084 NMT1/THI5 like AMK01_RS19885 PF02397 Bacterial sugar transferase AMK01_RS19890 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AMK01_RS19900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK01_RS19900 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMK01_RS19905 PF00231 ATP synthase AMK01_RS19910 PF00306 ATP synthase alpha/beta chain, C terminal domain AMK01_RS19910 PF02874 ATP synthase alpha/beta family, beta-barrel domain AMK01_RS19910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK01_RS19915 PF00213 ATP synthase delta (OSCP) subunit AMK01_RS19925 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AMK01_RS19925 PF17764 3′ DNA-binding domain (3′BD) AMK01_RS19925 PF18074 Primosomal protein N C-terminal domain AMK01_RS19925 PF00270 DEAD/DEAH box helicase AMK01_RS19930 PF00701 Dihydrodipicolinate synthetase family AMK01_RS19945 PF02899 Phage integrase, N-terminal SAM-like domain AMK01_RS19945 PF00589 Phage integrase family AMK01_RS19955 PF01292 Prokaryotic cytochrome b561 AMK01_RS19960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMK01_RS19960 PF07992 Pyridine nucleotide-disulphide oxidoreductase AMK01_RS19985 PF02817 e3 binding domain AMK01_RS19985 PF00364 Biotin-requiring enzyme AMK01_RS19985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AMK01_RS19995 PF16078 2-oxoglutarate dehydrogenase N-terminus AMK01_RS19995 PF00676 Dehydrogenase E1 component AMK01_RS19995 PF16870 2-oxoglutarate dehydrogenase C-terminal AMK01_RS19995 PF02779 Transketolase, pyrimidine binding domain AMK01_RS20000 PF02629 CoA binding domain AMK01_RS20000 PF00549 CoA-ligase AMK01_RS20005 PF00549 CoA-ligase AMK01_RS20005 PF08442 ATP-grasp domain AMK01_RS20010 PF00056 lactate/malate dehydrogenase, NAD binding domain AMK01_RS20010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AMK01_RS20015 PF03969 AFG1-like ATPase AMK01_RS20020 PF02974 Protease inhibitor Inh AMK01_RS20030 PF13085 2Fe-2S iron-sulfur cluster binding domain AMK01_RS20030 PF13237 4Fe-4S dicluster domain AMK01_RS20035 PF00890 FAD binding domain AMK01_RS20035 PF02910 Fumarate reductase flavoprotein C-term AMK01_RS20045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AMK01_RS20065 PF03795 YCII-related domain AMK01_RS20070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMK01_RS20070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AMK01_RS20075 PF00814 Glycoprotease family AMK01_RS20080 PF03900 Porphobilinogen deaminase, C-terminal domain AMK01_RS20080 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AMK01_RS20105 PF00117 Glutamine amidotransferase class-I AMK01_RS20115 PF02325 YGGT family AMK01_RS20120 PF02594 Uncharacterised ACR, YggU family COG1872 AMK01_RS20125 PF00719 Inorganic pyrophosphatase AMK01_RS20135 PF00009 Elongation factor Tu GTP binding domain AMK01_RS20135 PF03144 Elongation factor Tu domain 2 AMK01_RS20135 PF00679 Elongation factor G C-terminus AMK01_RS20140 PF01432 Peptidase family M3 AMK01_RS20160 PF17754 MftR C-terminal domain AMK01_RS20160 PF00440 Bacterial regulatory proteins, tetR family AMK01_RS20165 PF00764 Arginosuccinate synthase AMK01_RS20170 PF00106 short chain dehydrogenase AMK01_RS20175 PF01810 LysE type translocator AMK01_RS20180 PF00005 ABC transporter AMK01_RS20185 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS20195 PF04055 Radical SAM superfamily AMK01_RS20205 PF04545 Sigma-70, region 4 AMK01_RS20205 PF04542 Sigma-70 region 2 AMK01_RS20215 PF01329 Pterin 4 alpha carbinolamine dehydratase AMK01_RS20225 PF02834 LigT like Phosphoesterase AMK01_RS20230 PF13472 GDSL-like Lipase/Acylhydrolase family AMK01_RS20235 PF00005 ABC transporter AMK01_RS20245 PF01027 Inhibitor of apoptosis-promoting Bax1 AMK01_RS20265 PF00330 Aconitase family (aconitate hydratase) AMK01_RS20265 PF00694 Aconitase C-terminal domain AMK01_RS20270 PF00005 ABC transporter AMK01_RS20275 PF03379 CcmB protein AMK01_RS20280 PF01578 Cytochrome C assembly protein AMK01_RS20285 PF04995 Heme exporter protein D (CcmD) AMK01_RS20290 PF08534 Redoxin AMK01_RS20295 PF10755 Protein of unknown function (DUF2585) AMK01_RS20300 PF04279 Intracellular septation protein A AMK01_RS20305 PF02881 SRP54-type protein, helical bundle domain AMK01_RS20305 PF00448 SRP54-type protein, GTPase domain AMK01_RS20310 PF04055 Radical SAM superfamily AMK01_RS20310 PF00919 Uncharacterized protein family UPF0004 AMK01_RS20315 PF01678 Diaminopimelate epimerase AMK01_RS20325 PF02881 SRP54-type protein, helical bundle domain AMK01_RS20325 PF02978 Signal peptide binding domain AMK01_RS20325 PF00448 SRP54-type protein, GTPase domain AMK01_RS20330 PF02153 Prephenate dehydrogenase AMK01_RS20330 PF01817 Chorismate mutase type II AMK01_RS20335 PF00886 Ribosomal protein S16 AMK01_RS20340 PF01782 RimM N-terminal domain AMK01_RS20340 PF05239 PRC-barrel domain AMK01_RS20345 PF01746 tRNA (Guanine-1)-methyltransferase AMK01_RS20350 PF01245 Ribosomal protein L19 AMK01_RS20355 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS20360 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS20365 PF00330 Aconitase family (aconitate hydratase) AMK01_RS20370 PF00248 Aldo/keto reductase family AMK01_RS20380 PF00072 Response regulator receiver domain AMK01_RS20380 PF00486 Transcriptional regulatory protein, C terminal AMK01_RS20395 PF03548 Outer membrane lipoprotein carrier protein LolA AMK01_RS20400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AMK01_RS20400 PF17854 FtsK alpha domain AMK01_RS20400 PF09397 Ftsk gamma domain AMK01_RS20400 PF01580 FtsK/SpoIIIE family AMK01_RS20405 PF00909 Ammonium Transporter Family AMK01_RS20410 PF00543 Nitrogen regulatory protein P-II AMK01_RS20420 PF01494 FAD binding domain AMK01_RS20425 PF03966 Trm112p-like protein AMK01_RS20435 PF00085 Thioredoxin AMK01_RS20460 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS20465 PF16347 Domain of unknown function (DUF4976) AMK01_RS20465 PF00884 Sulfatase AMK01_RS20475 PF13407 Periplasmic binding protein domain AMK01_RS20480 PF00005 ABC transporter AMK01_RS20485 PF02653 Branched-chain amino acid transport system / permease component AMK01_RS20490 PF01244 Membrane dipeptidase (Peptidase family M19) AMK01_RS20495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS20500 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS20505 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS20505 PF12911 N-terminal TM domain of oligopeptide transport permease C AMK01_RS20510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS20510 PF00005 ABC transporter AMK01_RS20515 PF00005 ABC transporter AMK01_RS20515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AMK01_RS20525 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AMK01_RS20525 PF10091 Putative glucoamylase AMK01_RS20525 PF06165 Glycosyltransferase family 36 AMK01_RS20540 PF00005 ABC transporter AMK01_RS20540 PF00664 ABC transporter transmembrane region AMK01_RS20550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AMK01_RS20550 PF00364 Biotin-requiring enzyme AMK01_RS20550 PF00289 Biotin carboxylase, N-terminal domain AMK01_RS20550 PF02785 Biotin carboxylase C-terminal domain AMK01_RS20550 PF00682 HMGL-like AMK01_RS20550 PF02436 Conserved carboxylase domain AMK01_RS20560 PF00005 ABC transporter AMK01_RS20565 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS20570 PF00497 Bacterial extracellular solute-binding proteins, family 3 AMK01_RS20575 PF08220 DeoR-like helix-turn-helix domain AMK01_RS20575 PF00455 DeoR C terminal sensor domain AMK01_RS20580 PF07690 Major Facilitator Superfamily AMK01_RS20585 PF04551 GcpE protein AMK01_RS20590 PF00155 Aminotransferase class I and II AMK01_RS20595 PF00348 Polyprenyl synthetase AMK01_RS20600 PF00912 Transglycosylase AMK01_RS20615 PF01783 Ribosomal L32p protein family AMK01_RS20625 PF05233 PHB accumulation regulatory domain AMK01_RS20625 PF07879 PHB/PHA accumulation regulator DNA-binding domain AMK01_RS20630 PF02803 Thiolase, C-terminal domain AMK01_RS20630 PF00108 Thiolase, N-terminal domain AMK01_RS20660 PF11953 Domain of unknown function (DUF3470) AMK01_RS20660 PF00037 4Fe-4S binding domain AMK01_RS20665 PF02559 CarD-like/TRCF domain AMK01_RS20670 PF00140 Sigma-70 factor, region 1.2 AMK01_RS20670 PF04542 Sigma-70 region 2 AMK01_RS20670 PF04545 Sigma-70, region 4 AMK01_RS20675 PF01435 Peptidase family M48 AMK01_RS20680 PF07690 Major Facilitator Superfamily AMK01_RS20695 PF00005 ABC transporter AMK01_RS20695 PF16326 ABC transporter C-terminal domain AMK01_RS20700 PF06472 ABC transporter transmembrane region 2 AMK01_RS20700 PF00005 ABC transporter AMK01_RS20705 PF04204 Homoserine O-succinyltransferase AMK01_RS20715 PF00392 Bacterial regulatory proteins, gntR family AMK01_RS20715 PF07702 UTRA domain AMK01_RS20720 PF01380 SIS domain AMK01_RS20725 PF01979 Amidohydrolase family AMK01_RS20730 PF13580 SIS domain AMK01_RS20740 PF08207 Elongation factor P (EF-P) KOW-like domain AMK01_RS20740 PF01132 Elongation factor P (EF-P) OB domain AMK01_RS20740 PF09285 Elongation factor P, C-terminal AMK01_RS20745 PF00152 tRNA synthetases class II (D, K and N) AMK01_RS20750 PF04055 Radical SAM superfamily AMK01_RS20750 PF12544 Lysine-2,3-aminomutase AMK01_RS20755 PF00550 Phosphopantetheine attachment site AMK01_RS20780 PF00534 Glycosyl transferases group 1 AMK01_RS20790 PF13439 Glycosyltransferase Family 4 AMK01_RS20790 PF00534 Glycosyl transferases group 1 AMK01_RS20800 PF03466 LysR substrate binding domain AMK01_RS20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS20805 PF07063 Domain of unknown function (DUF1338) AMK01_RS20810 PF01266 FAD dependent oxidoreductase AMK01_RS20815 PF00171 Aldehyde dehydrogenase family AMK01_RS20825 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS20830 PF00005 ABC transporter AMK01_RS20855 PF00083 Sugar (and other) transporter AMK01_RS20860 PF03466 LysR substrate binding domain AMK01_RS20860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS20870 PF00829 Ribosomal prokaryotic L21 protein AMK01_RS20875 PF01016 Ribosomal L27 protein AMK01_RS20895 PF01926 50S ribosome-binding GTPase AMK01_RS20895 PF01018 GTP1/OBG AMK01_RS20900 PF01472 PUA domain AMK01_RS20900 PF00696 Amino acid kinase family AMK01_RS20905 PF00171 Aldehyde dehydrogenase family AMK01_RS20910 PF01467 Cytidylyltransferase-like AMK01_RS20920 PF00528 Binding-protein-dependent transport system inner membrane component AMK01_RS20925 PF03459 TOBE domain AMK01_RS20925 PF00005 ABC transporter AMK01_RS20940 PF02590 Predicted SPOUT methyltransferase AMK01_RS20950 PF03572 Peptidase family S41 AMK01_RS20950 PF13180 PDZ domain AMK01_RS20960 PF00293 NUDIX domain AMK01_RS20965 PF00210 Ferritin-like domain AMK01_RS20975 PF01336 OB-fold nucleic acid binding domain AMK01_RS20975 PF02811 PHP domain AMK01_RS20975 PF14579 Helix-hairpin-helix motif AMK01_RS20975 PF07733 Bacterial DNA polymerase III alpha NTPase domain AMK01_RS20975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AMK01_RS21000 PF03328 HpcH/HpaI aldolase/citrate lyase family AMK01_RS21015 PF00694 Aconitase C-terminal domain AMK01_RS21020 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS21025 PF00180 Isocitrate/isopropylmalate dehydrogenase AMK01_RS21030 PF01569 PAP2 superfamily AMK01_RS21035 PF00083 Sugar (and other) transporter AMK01_RS21045 PF00005 ABC transporter AMK01_RS21055 PF00245 Alkaline phosphatase AMK01_RS21065 PF01118 Semialdehyde dehydrogenase, NAD binding domain AMK01_RS21065 PF02774 Semialdehyde dehydrogenase, dimerisation domain AMK01_RS21075 PF17151 Periplasmic sensor domain AMK01_RS21075 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS21080 PF00484 Carbonic anhydrase AMK01_RS21085 PF08543 Phosphomethylpyrimidine kinase AMK01_RS21095 PF05088 Bacterial NAD-glutamate dehydrogenase AMK01_RS21100 PF11700 Vacuole effluxer Atg22 like AMK01_RS21105 PF01808 AICARFT/IMPCHase bienzyme AMK01_RS21105 PF02142 MGS-like domain AMK01_RS21110 PF07940 Heparinase II/III-like protein AMK01_RS21115 PF01189 16S rRNA methyltransferase RsmB/F AMK01_RS21115 PF01029 NusB family AMK01_RS21120 PF01435 Peptidase family M48 AMK01_RS21130 PF00501 AMP-binding enzyme AMK01_RS21130 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS21130 PF16177 Acetyl-coenzyme A synthetase N-terminus AMK01_RS21145 PF01168 Alanine racemase, N-terminal domain AMK01_RS21150 PF08264 Anticodon-binding domain of tRNA AMK01_RS21150 PF09334 tRNA synthetases class I (M) AMK01_RS21150 PF00133 tRNA synthetases class I (I, L, M and V) AMK01_RS21150 PF13603 Leucyl-tRNA synthetase, Domain 2 AMK01_RS21165 PF02195 ParB-like nuclease domain AMK01_RS21165 PF17762 HTH domain found in ParB protein AMK01_RS21170 PF13614 AAA domain AMK01_RS21175 PF02527 rRNA small subunit methyltransferase G AMK01_RS21180 PF01134 Glucose inhibited division protein A AMK01_RS21180 PF13932 GidA associated domain AMK01_RS21185 PF01926 50S ribosome-binding GTPase AMK01_RS21185 PF12631 MnmE helical domain AMK01_RS21185 PF10396 GTP-binding protein TrmE N-terminus AMK01_RS21190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK01_RS21190 PF07497 Rho termination factor, RNA-binding domain AMK01_RS21190 PF07498 Rho termination factor, N-terminal domain AMK01_RS21195 PF03653 Uncharacterised protein family (UPF0093) AMK01_RS21255 PF01751 Toprim domain AMK01_RS21255 PF00204 DNA gyrase B AMK01_RS21255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS21255 PF00986 DNA gyrase B subunit, carboxyl terminus AMK01_RS21400 PF13755 Sensor N-terminal transmembrane domain AMK01_RS21400 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS21400 PF00672 HAMP domain AMK01_RS21400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS21400 PF13756 Stimulus-sensing domain AMK01_RS21650 PF01266 FAD dependent oxidoreductase AMK01_RS21650 PF16350 FAD dependent oxidoreductase central domain AMK01_RS21650 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK01_RS21650 PF01571 Aminomethyltransferase folate-binding domain AMK01_RS21730 PF01555 DNA methylase AMK01_RS21950 PF03473 MOSC domain AMK01_RS22410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AMK01_RS22435 PF00202 Aminotransferase class-III AMK01_RS22465 PF00150 Cellulase (glycosyl hydrolase family 5) AMK01_RS22560 PF00501 AMP-binding enzyme AMK01_RS22560 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS22795 PF00580 UvrD/REP helicase N-terminal domain AMK01_RS22795 PF13361 UvrD-like helicase C-terminal domain AMK01_RS22820 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS22845 PF00672 HAMP domain AMK01_RS22845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS22845 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS22845 PF13755 Sensor N-terminal transmembrane domain AMK01_RS22845 PF13756 Stimulus-sensing domain AMK01_RS22940 PF01274 Malate synthase AMK01_RS24015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AMK01_RS24015 PF03483 B3/4 domain AMK01_RS24015 PF01588 Putative tRNA binding domain AMK01_RS24015 PF03147 Ferredoxin-fold anticodon binding domain AMK01_RS24015 PF03484 tRNA synthetase B5 domain AMK01_RS24025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AMK01_RS24025 PF03466 LysR substrate binding domain AMK01_RS24375 PF07690 Major Facilitator Superfamily AMK01_RS24410 PF07690 Major Facilitator Superfamily AMK01_RS24480 PF00378 Enoyl-CoA hydratase/isomerase AMK01_RS24575 PF00795 Carbon-nitrogen hydrolase AMK01_RS24655 PF01624 MutS domain I AMK01_RS24655 PF00488 MutS domain V AMK01_RS24655 PF05188 MutS domain II AMK01_RS24655 PF05192 MutS domain III AMK01_RS24655 PF05190 MutS family domain IV AMK01_RS24695 PF00929 Exonuclease AMK01_RS24755 PF12705 PD-(D/E)XK nuclease superfamily AMK01_RS24755 PF00580 UvrD/REP helicase N-terminal domain AMK01_RS24755 PF13361 UvrD-like helicase C-terminal domain AMK01_RS24820 PF13755 Sensor N-terminal transmembrane domain AMK01_RS24820 PF00672 HAMP domain AMK01_RS24820 PF13756 Stimulus-sensing domain AMK01_RS24820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS24820 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS24975 PF07238 PilZ domain AMK01_RS24975 PF03552 Cellulose synthase AMK01_RS24975 PF00535 Glycosyl transferase family 2 AMK01_RS24995 PF13416 Bacterial extracellular solute-binding protein AMK01_RS25115 PF02614 Glucuronate isomerase AMK01_RS25340 PF00009 Elongation factor Tu GTP binding domain AMK01_RS25340 PF11987 Translation-initiation factor 2 AMK01_RS25340 PF08364 Bacterial translation initiation factor IF-2 associated region AMK01_RS25340 PF04760 Translation initiation factor IF-2, N-terminal region AMK01_RS25480 PF00912 Transglycosylase AMK01_RS25480 PF00905 Penicillin binding protein transpeptidase domain AMK01_RS25480 PF17092 Penicillin-binding protein OB-like domain AMK01_RS25495 PF00563 EAL domain AMK01_RS25495 PF00990 Diguanylate cyclase, GGDEF domain AMK01_RS25495 PF03707 Bacterial signalling protein N terminal repeat AMK01_RS25540 PF00625 Guanylate kinase AMK01_RS25545 PF07969 Amidohydrolase family AMK01_RS25595 PF01113 Dihydrodipicolinate reductase, N-terminus AMK01_RS25595 PF05173 Dihydrodipicolinate reductase, C-terminus AMK01_RS25605 PF00664 ABC transporter transmembrane region AMK01_RS25605 PF00005 ABC transporter AMK01_RS25890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS25895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS25920 PF16363 GDP-mannose 4,6 dehydratase AMK01_RS26065 PF00248 Aldo/keto reductase family AMK01_RS26120 PF02601 Exonuclease VII, large subunit AMK01_RS26120 PF13742 OB-fold nucleic acid binding domain AMK01_RS26270 PF00043 Glutathione S-transferase, C-terminal domain AMK01_RS26270 PF13417 Glutathione S-transferase, N-terminal domain AMK01_RS26275 PF02673 Bacitracin resistance protein BacA AMK01_RS26335 PF13335 Magnesium chelatase, subunit ChlI C-terminal AMK01_RS26335 PF01078 Magnesium chelatase, subunit ChlI AMK01_RS26395 PF00005 ABC transporter AMK01_RS26395 PF00664 ABC transporter transmembrane region AMK01_RS26730 PF01252 Signal peptidase (SPase) II AMK01_RS26790 PF00672 HAMP domain AMK01_RS26790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AMK01_RS26790 PF02203 Tar ligand binding domain homologue AMK01_RS27190 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS27190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS27290 PF01274 Malate synthase AMK01_RS27490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AMK01_RS27490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AMK01_RS27555 PF16350 FAD dependent oxidoreductase central domain AMK01_RS27555 PF01571 Aminomethyltransferase folate-binding domain AMK01_RS27555 PF01266 FAD dependent oxidoreductase AMK01_RS27555 PF08669 Glycine cleavage T-protein C-terminal barrel domain AMK01_RS27740 PF00589 Phage integrase family AMK01_RS27740 PF14659 Phage integrase, N-terminal SAM-like domain AMK01_RS28345 PF00150 Cellulase (glycosyl hydrolase family 5) AMK01_RS28365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AMK01_RS28425 PF13193 AMP-binding enzyme C-terminal domain AMK01_RS28425 PF00501 AMP-binding enzyme AMK01_RS28440 PF00117 Glutamine amidotransferase class-I AMK01_RS28795 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS28800 PF00291 Pyridoxal-phosphate dependent enzyme AMK01_RS29060 PF05188 MutS domain II AMK01_RS29060 PF00488 MutS domain V AMK01_RS29060 PF05192 MutS domain III AMK01_RS29060 PF05190 MutS family domain IV AMK01_RS29060 PF01624 MutS domain I AMK01_RS29075 PF00390 Malic enzyme, N-terminal domain AMK01_RS29075 PF03949 Malic enzyme, NAD binding domain AMK01_RS29075 PF01515 Phosphate acetyl/butaryl transferase AMK01_RS29130 PF03968 OstA-like protein AMK01_RS29515 PF03932 CutC family AMK01_RS29635 PF00672 HAMP domain AMK01_RS29635 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS29635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS29700 PF00873 AcrB/AcrD/AcrF family AMK01_RS29705 PF00873 AcrB/AcrD/AcrF family AMK01_RS29840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AMK01_RS29840 PF12806 Acetyl-CoA dehydrogenase C-terminal like AMK01_RS29840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AMK01_RS29840 PF02770 Acyl-CoA dehydrogenase, middle domain AMK01_RS29920 PF13361 UvrD-like helicase C-terminal domain AMK01_RS29920 PF00580 UvrD/REP helicase N-terminal domain AMK01_RS30005 PF08240 Alcohol dehydrogenase GroES-like domain AMK01_RS30005 PF00107 Zinc-binding dehydrogenase AMK01_RS30135 PF01590 GAF domain AMK01_RS30135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AMK01_RS30135 PF00512 His Kinase A (phospho-acceptor) domain AMK01_RS30135 PF08446 PAS fold AMK01_RS30135 PF00360 Phytochrome region AMK01_RS30275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AMK01_RS30275 PF18269 T3SS EscN ATPase C-terminal domain