AMK01_RS00020	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS00080	PWY-4061	glutathione-mediated detoxification I
AMK01_RS00080	PWY-6842	glutathione-mediated detoxification II
AMK01_RS00080	PWY-7112	4-hydroxy-2-nonenal detoxification
AMK01_RS00080	PWY-7533	gliotoxin biosynthesis
AMK01_RS00120	PWY-4381	fatty acid biosynthesis initiation I
AMK01_RS00120	PWY-5743	3-hydroxypropanoate cycle
AMK01_RS00120	PWY-5744	glyoxylate assimilation
AMK01_RS00120	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK01_RS00120	PWY-6679	jadomycin biosynthesis
AMK01_RS00120	PWY-6722	candicidin biosynthesis
AMK01_RS00120	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS00125	PWY-2161	folate polyglutamylation
AMK01_RS00160	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK01_RS00190	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK01_RS00190	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK01_RS00205	PWY-3961	phosphopantothenate biosynthesis II
AMK01_RS00270	PWY-6728	methylaspartate cycle
AMK01_RS00270	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS00270	PWY-7118	chitin degradation to ethanol
AMK01_RS00270	PWY-7294	xylose degradation IV
AMK01_RS00270	PWY-7295	L-arabinose degradation IV
AMK01_RS00360	PWY-3821	galactose degradation III
AMK01_RS00360	PWY-6317	galactose degradation I (Leloir pathway)
AMK01_RS00360	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMK01_RS00360	PWY-6527	stachyose degradation
AMK01_RS00360	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMK01_RS00360	PWY-7344	UDP-D-galactose biosynthesis
AMK01_RS00365	PWY-5129	sphingolipid biosynthesis (plants)
AMK01_RS00460	PWY-6531	mannitol cycle
AMK01_RS00465	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
AMK01_RS00465	PWY-7248	pectin degradation III
AMK01_RS00505	PWY-7205	CMP phosphorylation
AMK01_RS00675	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS00675	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS00675	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS00675	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK01_RS00675	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS00675	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS00675	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS00675	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS00675	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS00675	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS00675	PWYG-321	mycolate biosynthesis
AMK01_RS00685	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS00685	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS00685	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS00685	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS00685	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS00685	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS00685	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS00685	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS00685	PWYG-321	mycolate biosynthesis
AMK01_RS00700	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS00795	PWY-5381	pyridine nucleotide cycling (plants)
AMK01_RS00815	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMK01_RS00820	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK01_RS00925	PWY-5532	adenosine nucleotides degradation IV
AMK01_RS00930	PWY-7399	methylphosphonate degradation II
AMK01_RS00935	PWY-5532	adenosine nucleotides degradation IV
AMK01_RS00965	PWY-7399	methylphosphonate degradation II
AMK01_RS00975	PWY-7399	methylphosphonate degradation II
AMK01_RS00990	PWY-7399	methylphosphonate degradation II
AMK01_RS01000	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK01_RS01000	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS01005	PWY-2941	L-lysine biosynthesis II
AMK01_RS01005	PWY-2942	L-lysine biosynthesis III
AMK01_RS01005	PWY-5097	L-lysine biosynthesis VI
AMK01_RS01015	PWY-2722	trehalose degradation IV
AMK01_RS01015	PWY-2723	trehalose degradation V
AMK01_RS01015	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK01_RS01015	PWY-5661	GDP-glucose biosynthesis
AMK01_RS01015	PWY-621	sucrose degradation III (sucrose invertase)
AMK01_RS01015	PWY-7238	sucrose biosynthesis II
AMK01_RS01015	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK01_RS01060	PWY-5381	pyridine nucleotide cycling (plants)
AMK01_RS01110	PWY-6556	pyrimidine ribonucleosides salvage II
AMK01_RS01110	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMK01_RS01110	PWY-7193	pyrimidine ribonucleosides salvage I
AMK01_RS01110	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK01_RS01115	PWY-4202	arsenate detoxification I (glutaredoxin)
AMK01_RS01115	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK01_RS01115	PWY-6608	guanosine nucleotides degradation III
AMK01_RS01115	PWY-6609	adenine and adenosine salvage III
AMK01_RS01115	PWY-6611	adenine and adenosine salvage V
AMK01_RS01115	PWY-6620	guanine and guanosine salvage
AMK01_RS01115	PWY-6627	salinosporamide A biosynthesis
AMK01_RS01115	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AMK01_RS01115	PWY-7179	purine deoxyribonucleosides degradation I
AMK01_RS01115	PWY-7179-1	purine deoxyribonucleosides degradation
AMK01_RS01120	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AMK01_RS01125	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMK01_RS01135	PWY-7183	pyrimidine nucleobases salvage I
AMK01_RS01140	PWY-6610	adenine and adenosine salvage IV
AMK01_RS01145	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AMK01_RS01235	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMK01_RS01255	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS01270	PWY-2201	folate transformations I
AMK01_RS01270	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS01320	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AMK01_RS01325	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
AMK01_RS01325	PWY-5940	streptomycin biosynthesis
AMK01_RS01345	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS01345	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS01345	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS01345	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK01_RS01345	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS01345	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS01345	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS01345	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS01345	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS01345	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS01345	PWYG-321	mycolate biosynthesis
AMK01_RS01355	PWY-7723	AMK01_RS01355
AMK01_RS01360	PWY-7723	AMK01_RS01360
AMK01_RS01400	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS01420	PWY-6899	base-degraded thiamin salvage
AMK01_RS01420	PWY-7356	thiamin salvage IV (yeast)
AMK01_RS01670	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS01710	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS01725	PWY-6700	queuosine biosynthesis
AMK01_RS01735	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMK01_RS01755	PWY-5686	UMP biosynthesis
AMK01_RS01780	PWY-2201	folate transformations I
AMK01_RS01790	PWY-5692	allantoin degradation to glyoxylate II
AMK01_RS01790	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AMK01_RS01810	PWY-6936	seleno-amino acid biosynthesis
AMK01_RS01835	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK01_RS01835	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS01835	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS01835	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK01_RS01860	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS01910	PWY-5028	L-histidine degradation II
AMK01_RS01910	PWY-5030	L-histidine degradation III
AMK01_RS01945	PWY-5839	menaquinol-7 biosynthesis
AMK01_RS01945	PWY-5844	menaquinol-9 biosynthesis
AMK01_RS01945	PWY-5849	menaquinol-6 biosynthesis
AMK01_RS01945	PWY-5890	menaquinol-10 biosynthesis
AMK01_RS01945	PWY-5891	menaquinol-11 biosynthesis
AMK01_RS01945	PWY-5892	menaquinol-12 biosynthesis
AMK01_RS01945	PWY-5895	menaquinol-13 biosynthesis
AMK01_RS01980	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK01_RS02020	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS02040	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK01_RS02040	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMK01_RS02095	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMK01_RS02095	PWY-5368	dimorphecolate biosynthesis
AMK01_RS02095	PWY-5995	linoleate biosynthesis I (plants)
AMK01_RS02095	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMK01_RS02095	PWY-6803	phosphatidylcholine acyl editing
AMK01_RS02095	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMK01_RS02095	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMK01_RS02095	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMK01_RS02095	PWY-7470	phosphatidylcholine biosynthesis VII
AMK01_RS02095	PWY-7618	ricinoleate biosynthesis
AMK01_RS02120	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK01_RS02145	PWY-1281	sulfoacetaldehyde degradation I
AMK01_RS02145	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK01_RS02145	PWY-5482	pyruvate fermentation to acetate II
AMK01_RS02145	PWY-5485	pyruvate fermentation to acetate IV
AMK01_RS02145	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS02145	PWY-6637	sulfolactate degradation II
AMK01_RS02145	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK01_RS02340	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS02340	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS02540	PWY-5686	UMP biosynthesis
AMK01_RS02560	PWY-5686	UMP biosynthesis
AMK01_RS02575	PWY-3801	sucrose degradation II (sucrose synthase)
AMK01_RS02575	PWY-5054	sorbitol biosynthesis I
AMK01_RS02575	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMK01_RS02575	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK01_RS02575	PWY-5659	GDP-mannose biosynthesis
AMK01_RS02575	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS02575	PWY-621	sucrose degradation III (sucrose invertase)
AMK01_RS02575	PWY-622	starch biosynthesis
AMK01_RS02575	PWY-6981	chitin biosynthesis
AMK01_RS02575	PWY-6992	1,5-anhydrofructose degradation
AMK01_RS02575	PWY-7238	sucrose biosynthesis II
AMK01_RS02575	PWY-7347	sucrose biosynthesis III
AMK01_RS02575	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK01_RS02695	PWY-723	alkylnitronates degradation
AMK01_RS02755	PWY-4981	L-proline biosynthesis II (from arginine)
AMK01_RS02755	PWY-4984	urea cycle
AMK01_RS02755	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS02775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS02860	PWY-5686	UMP biosynthesis
AMK01_RS02965	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMK01_RS02965	PWY-5109	2-methylbutanoate biosynthesis
AMK01_RS02965	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMK01_RS02965	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMK01_RS02965	PWY-5177	glutaryl-CoA degradation
AMK01_RS02965	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK01_RS02965	PWY-6435	4-hydroxybenzoate biosynthesis V
AMK01_RS02965	PWY-6583	pyruvate fermentation to butanol I
AMK01_RS02965	PWY-6863	pyruvate fermentation to hexanol
AMK01_RS02965	PWY-6883	pyruvate fermentation to butanol II
AMK01_RS02965	PWY-6944	androstenedione degradation
AMK01_RS02965	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMK01_RS02965	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMK01_RS02965	PWY-7007	methyl ketone biosynthesis
AMK01_RS02965	PWY-7046	4-coumarate degradation (anaerobic)
AMK01_RS02965	PWY-7094	fatty acid salvage
AMK01_RS02965	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMK01_RS02965	PWY-735	jasmonic acid biosynthesis
AMK01_RS02965	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMK01_RS02965	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMK01_RS02965	PWY-7726	AMK01_RS02965
AMK01_RS02980	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS03015	PWY-3821	galactose degradation III
AMK01_RS03015	PWY-6317	galactose degradation I (Leloir pathway)
AMK01_RS03015	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMK01_RS03015	PWY-6527	stachyose degradation
AMK01_RS03015	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMK01_RS03015	PWY-7344	UDP-D-galactose biosynthesis
AMK01_RS03075	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS03075	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS03150	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK01_RS03150	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK01_RS03220	PWY-2941	L-lysine biosynthesis II
AMK01_RS03220	PWY-2942	L-lysine biosynthesis III
AMK01_RS03220	PWY-5097	L-lysine biosynthesis VI
AMK01_RS03475	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS03665	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK01_RS03665	PWY-622	starch biosynthesis
AMK01_RS03675	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMK01_RS03675	PWY-2201	folate transformations I
AMK01_RS03675	PWY-3841	folate transformations II
AMK01_RS03675	PWY-5030	L-histidine degradation III
AMK01_RS03675	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS03675	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMK01_RS03715	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS03715	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS03715	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS03715	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS03720	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK01_RS03720	PWY-6855	chitin degradation I (archaea)
AMK01_RS03720	PWY-6906	chitin derivatives degradation
AMK01_RS03725	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK01_RS03735	PWY-381	nitrate reduction II (assimilatory)
AMK01_RS03735	PWY-5675	nitrate reduction V (assimilatory)
AMK01_RS03735	PWY-6549	L-glutamine biosynthesis III
AMK01_RS03735	PWY-6963	ammonia assimilation cycle I
AMK01_RS03735	PWY-6964	ammonia assimilation cycle II
AMK01_RS03770	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS03845	PWY-5642	2,4-dinitrotoluene degradation
AMK01_RS03845	PWY-6373	acrylate degradation
AMK01_RS03880	PWY-5530	sorbitol biosynthesis II
AMK01_RS03880	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS03920	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMK01_RS03920	PWY-6808	dTDP-D-forosamine biosynthesis
AMK01_RS03920	PWY-6942	dTDP-D-desosamine biosynthesis
AMK01_RS03920	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMK01_RS03920	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMK01_RS03920	PWY-6974	dTDP-L-olivose biosynthesis
AMK01_RS03920	PWY-6976	dTDP-L-mycarose biosynthesis
AMK01_RS03920	PWY-7104	dTDP-L-megosamine biosynthesis
AMK01_RS03920	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMK01_RS03920	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMK01_RS03920	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMK01_RS03920	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMK01_RS03920	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMK01_RS03920	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMK01_RS03920	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMK01_RS03920	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMK01_RS03920	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMK01_RS03920	PWY-7688	AMK01_RS03920
AMK01_RS03925	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMK01_RS03925	PWY-7688	AMK01_RS03925
AMK01_RS03960	PWY-6823	molybdenum cofactor biosynthesis
AMK01_RS03970	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK01_RS04020	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMK01_RS04020	PWY-6808	dTDP-D-forosamine biosynthesis
AMK01_RS04020	PWY-6942	dTDP-D-desosamine biosynthesis
AMK01_RS04020	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMK01_RS04020	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMK01_RS04020	PWY-6974	dTDP-L-olivose biosynthesis
AMK01_RS04020	PWY-6976	dTDP-L-mycarose biosynthesis
AMK01_RS04020	PWY-7104	dTDP-L-megosamine biosynthesis
AMK01_RS04020	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMK01_RS04020	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMK01_RS04020	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMK01_RS04020	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMK01_RS04020	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMK01_RS04020	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMK01_RS04020	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMK01_RS04020	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMK01_RS04020	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMK01_RS04020	PWY-7688	AMK01_RS04020
AMK01_RS04025	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AMK01_RS04025	PWY-5739	GDP-D-perosamine biosynthesis
AMK01_RS04025	PWY-5740	GDP-L-colitose biosynthesis
AMK01_RS04025	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AMK01_RS04025	PWY-7573	GDP-mycosamine biosynthesis
AMK01_RS04030	PWY-5481	pyruvate fermentation to lactate
AMK01_RS04030	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AMK01_RS04030	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS04070	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK01_RS04070	PWY-6596	adenosine nucleotides degradation I
AMK01_RS04070	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS04105	PWY-6840	homoglutathione biosynthesis
AMK01_RS04105	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMK01_RS04110	PWY-2201	folate transformations I
AMK01_RS04245	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMK01_RS04245	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS04245	PWY-6168	flavin biosynthesis III (fungi)
AMK01_RS04270	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS04310	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMK01_RS04355	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK01_RS04355	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMK01_RS04355	PWY-7242	D-fructuronate degradation
AMK01_RS04355	PWY-7310	D-glucosaminate degradation
AMK01_RS04355	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMK01_RS04360	PWY-7130	L-glucose degradation
AMK01_RS04450	PWY-7560	methylerythritol phosphate pathway II
AMK01_RS04505	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS04515	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS04515	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK01_RS04515	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK01_RS04650	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK01_RS04650	PWY-6892	thiazole biosynthesis I (E. coli)
AMK01_RS04650	PWY-7560	methylerythritol phosphate pathway II
AMK01_RS04705	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS04705	PWY-6416	quinate degradation II
AMK01_RS04705	PWY-6707	gallate biosynthesis
AMK01_RS04745	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS04745	PWY-6168	flavin biosynthesis III (fungi)
AMK01_RS04745	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMK01_RS04750	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS04775	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS04775	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS04775	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS04775	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS04775	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS04775	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS04775	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS04775	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS04775	PWYG-321	mycolate biosynthesis
AMK01_RS04790	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK01_RS04790	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK01_RS04850	PWY-3781	aerobic respiration I (cytochrome c)
AMK01_RS04850	PWY-4521	arsenite oxidation I (respiratory)
AMK01_RS04850	PWY-6692	Fe(II) oxidation
AMK01_RS04850	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK01_RS04895	PWY-702	L-methionine biosynthesis II
AMK01_RS05090	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK01_RS05090	PWY-6549	L-glutamine biosynthesis III
AMK01_RS05090	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK01_RS05090	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK01_RS05415	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK01_RS05415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS05415	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK01_RS05415	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK01_RS05440	PWY-7644	heparin degradation
AMK01_RS05470	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS05745	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMK01_RS05805	PWY-5278	sulfite oxidation III
AMK01_RS05805	PWY-5340	sulfate activation for sulfonation
AMK01_RS05805	PWY-6683	sulfate reduction III (assimilatory)
AMK01_RS05805	PWY-6932	selenate reduction
AMK01_RS05810	PWY-5278	sulfite oxidation III
AMK01_RS05810	PWY-5340	sulfate activation for sulfonation
AMK01_RS05810	PWY-6683	sulfate reduction III (assimilatory)
AMK01_RS05810	PWY-6932	selenate reduction
AMK01_RS05825	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMK01_RS05825	PWY-7494	choline degradation IV
AMK01_RS05830	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMK01_RS05830	PWY-7494	choline degradation IV
AMK01_RS06105	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK01_RS06110	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK01_RS06110	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK01_RS06110	PWY-6936	seleno-amino acid biosynthesis
AMK01_RS06110	PWY-702	L-methionine biosynthesis II
AMK01_RS06200	PWY-6854	ethylene biosynthesis III (microbes)
AMK01_RS06385	PWY-5941	glycogen degradation II (eukaryotic)
AMK01_RS06385	PWY-6724	starch degradation II
AMK01_RS06385	PWY-6737	starch degradation V
AMK01_RS06385	PWY-7238	sucrose biosynthesis II
AMK01_RS06530	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK01_RS06530	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK01_RS06545	PWY-6902	chitin degradation II
AMK01_RS06710	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK01_RS06710	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK01_RS06710	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMK01_RS06715	PWY-381	nitrate reduction II (assimilatory)
AMK01_RS06715	PWY-5675	nitrate reduction V (assimilatory)
AMK01_RS06715	PWY-6549	L-glutamine biosynthesis III
AMK01_RS06715	PWY-6963	ammonia assimilation cycle I
AMK01_RS06715	PWY-6964	ammonia assimilation cycle II
AMK01_RS06775	PWY-6617	adenosine nucleotides degradation III
AMK01_RS06845	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMK01_RS06890	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AMK01_RS06890	PWY-5739	GDP-D-perosamine biosynthesis
AMK01_RS06890	PWY-5740	GDP-L-colitose biosynthesis
AMK01_RS06890	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AMK01_RS06890	PWY-7573	GDP-mycosamine biosynthesis
AMK01_RS06935	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK01_RS06935	PWY-622	starch biosynthesis
AMK01_RS07050	PWY-2941	L-lysine biosynthesis II
AMK01_RS07050	PWY-2942	L-lysine biosynthesis III
AMK01_RS07050	PWY-5097	L-lysine biosynthesis VI
AMK01_RS07085	PWY-6012	acyl carrier protein metabolism I
AMK01_RS07085	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMK01_RS07145	PWY-6854	ethylene biosynthesis III (microbes)
AMK01_RS07200	PWY-5669	phosphatidylethanolamine biosynthesis I
AMK01_RS07205	PWY-5669	phosphatidylethanolamine biosynthesis I
AMK01_RS07265	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS07265	PWY-6871	3-methylbutanol biosynthesis
AMK01_RS07275	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS07280	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS07285	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS07310	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS07310	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK01_RS07310	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK01_RS07310	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK01_RS07330	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK01_RS07385	PWY-4381	fatty acid biosynthesis initiation I
AMK01_RS07385	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMK01_RS07385	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS07390	PWY-5367	petroselinate biosynthesis
AMK01_RS07390	PWY-5515	L-arabinose degradation II
AMK01_RS07390	PWY-5525	D-glucuronate degradation I
AMK01_RS07390	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS07390	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS07390	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS07390	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK01_RS07390	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS07390	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS07390	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS07390	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS07390	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS07390	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS07390	PWYG-321	mycolate biosynthesis
AMK01_RS07415	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS07425	PWY-7294	xylose degradation IV
AMK01_RS07425	PWY-7295	L-arabinose degradation IV
AMK01_RS07500	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK01_RS07500	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMK01_RS07500	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS07500	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS07500	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMK01_RS07500	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK01_RS07500	PWY-7205	CMP phosphorylation
AMK01_RS07500	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK01_RS07500	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS07500	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS07500	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS07500	PWY-7224	purine deoxyribonucleosides salvage
AMK01_RS07500	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS07500	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK01_RS07520	PWY-6823	molybdenum cofactor biosynthesis
AMK01_RS07530	PWY-5269	cardiolipin biosynthesis II
AMK01_RS07530	PWY-5668	cardiolipin biosynthesis I
AMK01_RS07570	PWY-7399	methylphosphonate degradation II
AMK01_RS07575	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS07575	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMK01_RS07580	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS07580	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK01_RS07580	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK01_RS07665	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK01_RS07665	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK01_RS07685	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK01_RS07685	PWY-181	photorespiration
AMK01_RS07685	PWY-2161	folate polyglutamylation
AMK01_RS07685	PWY-2201	folate transformations I
AMK01_RS07685	PWY-3661	glycine betaine degradation I
AMK01_RS07685	PWY-3661-1	glycine betaine degradation II (mammalian)
AMK01_RS07685	PWY-3841	folate transformations II
AMK01_RS07685	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS07695	PWY-5525	D-glucuronate degradation I
AMK01_RS07700	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS07700	PWY-6168	flavin biosynthesis III (fungi)
AMK01_RS07700	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS07720	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS07720	PWY-6168	flavin biosynthesis III (fungi)
AMK01_RS07755	PWY-4381	fatty acid biosynthesis initiation I
AMK01_RS07790	PWY-1001	cellulose biosynthesis
AMK01_RS07800	PWY-6788	cellulose degradation II (fungi)
AMK01_RS07885	PWY-6655	xanthan biosynthesis
AMK01_RS07885	PWY-6658	acetan biosynthesis
AMK01_RS07925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS07925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS07930	PWY-40	putrescine biosynthesis I
AMK01_RS07930	PWY-6305	putrescine biosynthesis IV
AMK01_RS07970	PWY-5344	L-homocysteine biosynthesis
AMK01_RS07970	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMK01_RS08000	PWY-5692	allantoin degradation to glyoxylate II
AMK01_RS08000	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
AMK01_RS08180	PWY-5741	ethylmalonyl-CoA pathway
AMK01_RS08180	PWY-5743	3-hydroxypropanoate cycle
AMK01_RS08180	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK01_RS08180	PWY-6728	methylaspartate cycle
AMK01_RS08180	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK01_RS08285	PWY-5686	UMP biosynthesis
AMK01_RS08290	PWY-5686	UMP biosynthesis
AMK01_RS08330	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK01_RS08330	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK01_RS08330	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMK01_RS08555	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS08595	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS08595	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS08595	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS08595	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS08625	PWY-6654	phosphopantothenate biosynthesis III
AMK01_RS08705	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMK01_RS08705	PWY-7494	choline degradation IV
AMK01_RS08790	PWY-6134	L-tyrosine biosynthesis IV
AMK01_RS08790	PWY-7158	L-phenylalanine degradation V
AMK01_RS08860	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK01_RS08860	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS08860	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK01_RS08860	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK01_RS08860	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS08860	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS08860	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS08860	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK01_RS08960	PWY-5350	thiosulfate disproportionation III (rhodanese)
AMK01_RS09005	PWY-6683	sulfate reduction III (assimilatory)
AMK01_RS09215	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMK01_RS09220	PWY-5381	pyridine nucleotide cycling (plants)
AMK01_RS09220	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK01_RS09220	PWY-6596	adenosine nucleotides degradation I
AMK01_RS09220	PWY-6606	guanosine nucleotides degradation II
AMK01_RS09220	PWY-6607	guanosine nucleotides degradation I
AMK01_RS09220	PWY-6608	guanosine nucleotides degradation III
AMK01_RS09220	PWY-7185	UTP and CTP dephosphorylation I
AMK01_RS09380	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMK01_RS09470	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS09470	PWY-6416	quinate degradation II
AMK01_RS09470	PWY-6707	gallate biosynthesis
AMK01_RS09535	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK01_RS09540	PWY-5386	methylglyoxal degradation I
AMK01_RS09605	PWY-6936	seleno-amino acid biosynthesis
AMK01_RS09625	PWY-6936	seleno-amino acid biosynthesis
AMK01_RS09625	PWY-7274	D-cycloserine biosynthesis
AMK01_RS09720	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK01_RS09720	PWY-5981	CDP-diacylglycerol biosynthesis III
AMK01_RS09740	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS09740	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS09740	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS09740	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK01_RS09740	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS09740	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS09740	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS09740	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS09740	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS09740	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS09740	PWYG-321	mycolate biosynthesis
AMK01_RS09755	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK01_RS09755	PWY-622	starch biosynthesis
AMK01_RS09780	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK01_RS09780	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMK01_RS09785	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS09785	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK01_RS09785	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK01_RS09785	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS09785	PWY-5723	Rubisco shunt
AMK01_RS09785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS09785	PWY-6886	1-butanol autotrophic biosynthesis
AMK01_RS09785	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS09785	PWY-7003	glycerol degradation to butanol
AMK01_RS09785	PWY-7124	ethylene biosynthesis V (engineered)
AMK01_RS09785	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK01_RS09820	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMK01_RS09820	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK01_RS09835	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMK01_RS09835	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMK01_RS09855	PWY-7560	methylerythritol phosphate pathway II
AMK01_RS09910	PWY-6936	seleno-amino acid biosynthesis
AMK01_RS10035	PWY-5194	siroheme biosynthesis
AMK01_RS10035	PWY-5441	S-methyl-L-methionine cycle
AMK01_RS10035	PWY-702	L-methionine biosynthesis II
AMK01_RS10035	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK01_RS10045	PWY-6683	sulfate reduction III (assimilatory)
AMK01_RS10475	PWY-2201	folate transformations I
AMK01_RS10475	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS10475	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS10550	PWY-6486	D-galacturonate degradation II
AMK01_RS10550	PWY-6497	D-galactarate degradation II
AMK01_RS10550	PWY-6499	D-glucarate degradation II
AMK01_RS10550	PWY-6501	D-glucuronate degradation II
AMK01_RS10555	PWY-7242	D-fructuronate degradation
AMK01_RS10635	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS10670	PWY-6826	phosphatidylcholine biosynthesis VI
AMK01_RS10725	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK01_RS10725	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK01_RS10725	PWY-6453	stigma estolide biosynthesis
AMK01_RS10725	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMK01_RS10725	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMK01_RS10730	PWY-6749	CMP-legionaminate biosynthesis I
AMK01_RS10785	PWY-381	nitrate reduction II (assimilatory)
AMK01_RS10785	PWY-5675	nitrate reduction V (assimilatory)
AMK01_RS10785	PWY-6549	L-glutamine biosynthesis III
AMK01_RS10785	PWY-6963	ammonia assimilation cycle I
AMK01_RS10785	PWY-6964	ammonia assimilation cycle II
AMK01_RS10800	PWY-6938	NADH repair
AMK01_RS10860	PWY-6700	queuosine biosynthesis
AMK01_RS10865	PWY-6700	queuosine biosynthesis
AMK01_RS10985	PWY-40	putrescine biosynthesis I
AMK01_RS10985	PWY-6305	putrescine biosynthesis IV
AMK01_RS11000	PWY-4041	&gamma;-glutamyl cycle
AMK01_RS11000	PWY-5826	hypoglycin biosynthesis
AMK01_RS11070	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK01_RS11070	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS11070	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS11070	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMK01_RS11070	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK01_RS11070	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK01_RS11075	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK01_RS11075	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK01_RS11155	PWY-6823	molybdenum cofactor biosynthesis
AMK01_RS11195	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMK01_RS11195	PWY-7177	UTP and CTP dephosphorylation II
AMK01_RS11195	PWY-7185	UTP and CTP dephosphorylation I
AMK01_RS11205	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS11205	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS11205	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS11205	PWY-7003	glycerol degradation to butanol
AMK01_RS11280	PWY-5663	tetrahydrobiopterin biosynthesis I
AMK01_RS11280	PWY-5664	tetrahydrobiopterin biosynthesis II
AMK01_RS11280	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMK01_RS11280	PWY-6703	preQ<sub>0</sub> biosynthesis
AMK01_RS11280	PWY-6983	tetrahydrobiopterin biosynthesis III
AMK01_RS11280	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMK01_RS11385	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS11395	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMK01_RS11395	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMK01_RS11415	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS11415	PWY-3162	L-tryptophan degradation V (side chain pathway)
AMK01_RS11415	PWY-5057	L-valine degradation II
AMK01_RS11415	PWY-5076	L-leucine degradation III
AMK01_RS11415	PWY-5078	L-isoleucine degradation II
AMK01_RS11415	PWY-5079	L-phenylalanine degradation III
AMK01_RS11415	PWY-5082	L-methionine degradation III
AMK01_RS11415	PWY-5480	pyruvate fermentation to ethanol I
AMK01_RS11415	PWY-5486	pyruvate fermentation to ethanol II
AMK01_RS11415	PWY-5751	phenylethanol biosynthesis
AMK01_RS11415	PWY-6313	serotonin degradation
AMK01_RS11415	PWY-6333	acetaldehyde biosynthesis I
AMK01_RS11415	PWY-6342	noradrenaline and adrenaline degradation
AMK01_RS11415	PWY-6454	vancomycin resistance I
AMK01_RS11415	PWY-6587	pyruvate fermentation to ethanol III
AMK01_RS11415	PWY-6802	salidroside biosynthesis
AMK01_RS11415	PWY-6871	3-methylbutanol biosynthesis
AMK01_RS11415	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS11415	PWY-7013	L-1,2-propanediol degradation
AMK01_RS11415	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS11415	PWY-7118	chitin degradation to ethanol
AMK01_RS11415	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMK01_RS11440	PWY-4381	fatty acid biosynthesis initiation I
AMK01_RS11440	PWY-5743	3-hydroxypropanoate cycle
AMK01_RS11440	PWY-5744	glyoxylate assimilation
AMK01_RS11440	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK01_RS11440	PWY-6679	jadomycin biosynthesis
AMK01_RS11440	PWY-6722	candicidin biosynthesis
AMK01_RS11440	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS11520	PWY-6823	molybdenum cofactor biosynthesis
AMK01_RS11520	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK01_RS11520	PWY-6892	thiazole biosynthesis I (E. coli)
AMK01_RS11520	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK01_RS11545	PWY-6823	molybdenum cofactor biosynthesis
AMK01_RS11545	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK01_RS11545	PWY-6892	thiazole biosynthesis I (E. coli)
AMK01_RS11545	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK01_RS11625	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK01_RS11625	PWY-5723	Rubisco shunt
AMK01_RS11640	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK01_RS11640	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK01_RS11640	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS11640	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK01_RS11670	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK01_RS11670	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK01_RS11670	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK01_RS11675	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS11675	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK01_RS11675	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK01_RS11685	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS11685	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK01_RS11685	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK01_RS11710	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK01_RS11710	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK01_RS11710	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK01_RS11725	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS11725	PWY-6416	quinate degradation II
AMK01_RS11725	PWY-6707	gallate biosynthesis
AMK01_RS11735	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS11850	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS11850	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS11855	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMK01_RS11870	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK01_RS11870	PWY-6549	L-glutamine biosynthesis III
AMK01_RS11870	PWY-6728	methylaspartate cycle
AMK01_RS11870	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS11870	PWY-7124	ethylene biosynthesis V (engineered)
AMK01_RS11870	PWY-7254	TCA cycle VII (acetate-producers)
AMK01_RS11870	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK01_RS11910	PWY-6019	pseudouridine degradation
AMK01_RS11955	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMK01_RS11955	PWY-6148	tetrahydromethanopterin biosynthesis
AMK01_RS11955	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMK01_RS11955	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMK01_RS11960	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMK01_RS11960	PWY-6148	tetrahydromethanopterin biosynthesis
AMK01_RS11960	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMK01_RS11960	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMK01_RS11965	PWY-6614	tetrahydrofolate biosynthesis
AMK01_RS12025	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS12025	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK01_RS12025	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK01_RS12025	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS12025	PWY-5723	Rubisco shunt
AMK01_RS12025	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS12025	PWY-6886	1-butanol autotrophic biosynthesis
AMK01_RS12025	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS12025	PWY-7003	glycerol degradation to butanol
AMK01_RS12025	PWY-7124	ethylene biosynthesis V (engineered)
AMK01_RS12025	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK01_RS12055	PWY-1281	sulfoacetaldehyde degradation I
AMK01_RS12055	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK01_RS12055	PWY-5482	pyruvate fermentation to acetate II
AMK01_RS12055	PWY-5485	pyruvate fermentation to acetate IV
AMK01_RS12055	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS12055	PWY-6637	sulfolactate degradation II
AMK01_RS12055	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK01_RS12085	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK01_RS12085	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMK01_RS12090	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK01_RS12090	PWY-6164	3-dehydroquinate biosynthesis I
AMK01_RS12090	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMK01_RS12100	PWY-5381	pyridine nucleotide cycling (plants)
AMK01_RS12100	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMK01_RS12110	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS12120	PWY-6164	3-dehydroquinate biosynthesis I
AMK01_RS12130	PWY-4081	glutathione redox reactions I
AMK01_RS12150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK01_RS12150	PWY-5723	Rubisco shunt
AMK01_RS12155	PWY-181	photorespiration
AMK01_RS12165	PWY-5392	reductive TCA cycle II
AMK01_RS12165	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK01_RS12165	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS12165	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK01_RS12165	PWY-6728	methylaspartate cycle
AMK01_RS12165	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS12165	PWY-7254	TCA cycle VII (acetate-producers)
AMK01_RS12165	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK01_RS12175	PWY-5392	reductive TCA cycle II
AMK01_RS12175	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK01_RS12175	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS12175	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK01_RS12175	PWY-6728	methylaspartate cycle
AMK01_RS12175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS12175	PWY-7254	TCA cycle VII (acetate-producers)
AMK01_RS12175	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK01_RS12185	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK01_RS12185	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK01_RS12210	PWY-6823	molybdenum cofactor biosynthesis
AMK01_RS12215	PWY-5839	menaquinol-7 biosynthesis
AMK01_RS12215	PWY-5844	menaquinol-9 biosynthesis
AMK01_RS12215	PWY-5849	menaquinol-6 biosynthesis
AMK01_RS12215	PWY-5890	menaquinol-10 biosynthesis
AMK01_RS12215	PWY-5891	menaquinol-11 biosynthesis
AMK01_RS12215	PWY-5892	menaquinol-12 biosynthesis
AMK01_RS12215	PWY-5895	menaquinol-13 biosynthesis
AMK01_RS12240	PWY-4261	glycerol degradation I
AMK01_RS12250	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK01_RS12250	PWY-6892	thiazole biosynthesis I (E. coli)
AMK01_RS12250	PWY-7560	methylerythritol phosphate pathway II
AMK01_RS12290	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AMK01_RS12290	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AMK01_RS12485	PWY-7039	phosphatidate metabolism, as a signaling molecule
AMK01_RS12490	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK01_RS12490	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK01_RS12490	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK01_RS12495	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK01_RS12495	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK01_RS12495	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK01_RS12605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS12605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS12670	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS12670	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS12670	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS12670	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK01_RS12670	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS12670	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS12670	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS12670	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS12670	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS12670	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS12670	PWYG-321	mycolate biosynthesis
AMK01_RS12700	PWY-5443	aminopropanol phosphate biosynthesis I
AMK01_RS12710	PWY-5194	siroheme biosynthesis
AMK01_RS12710	PWY-5441	S-methyl-L-methionine cycle
AMK01_RS12710	PWY-702	L-methionine biosynthesis II
AMK01_RS12710	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK01_RS12730	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK01_RS12730	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK01_RS12730	PWY-6268	adenosylcobalamin salvage from cobalamin
AMK01_RS12730	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK01_RS12745	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK01_RS12745	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK01_RS12745	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK01_RS12915	PWY-4202	arsenate detoxification I (glutaredoxin)
AMK01_RS12915	PWY-4621	arsenate detoxification II (glutaredoxin)
AMK01_RS13300	PWY-4983	L-citrulline-nitric oxide cycle
AMK01_RS13300	PWY-4984	urea cycle
AMK01_RS13300	PWY-5	canavanine biosynthesis
AMK01_RS13300	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS13300	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS13310	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS13435	PWY-3781	aerobic respiration I (cytochrome c)
AMK01_RS13435	PWY-4521	arsenite oxidation I (respiratory)
AMK01_RS13435	PWY-6692	Fe(II) oxidation
AMK01_RS13435	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK01_RS13540	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS13640	PWY-6807	xyloglucan degradation II (exoglucanase)
AMK01_RS13780	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS13780	PWY-6168	flavin biosynthesis III (fungi)
AMK01_RS14015	PWY-5057	L-valine degradation II
AMK01_RS14015	PWY-5076	L-leucine degradation III
AMK01_RS14015	PWY-5078	L-isoleucine degradation II
AMK01_RS14015	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS14015	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS14015	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS14015	PWY-5108	L-isoleucine biosynthesis V
AMK01_RS14065	PWY-2301	<i>myo</i>-inositol biosynthesis
AMK01_RS14065	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
AMK01_RS14065	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
AMK01_RS14065	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
AMK01_RS14065	PWY-6664	di-myo-inositol phosphate biosynthesis
AMK01_RS14090	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS14090	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS14105	PWY-4261	glycerol degradation I
AMK01_RS14180	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14180	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14270	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AMK01_RS14270	PWY-581	indole-3-acetate biosynthesis II
AMK01_RS14270	PWY-7308	acrylonitrile degradation I
AMK01_RS14275	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AMK01_RS14275	PWY-581	indole-3-acetate biosynthesis II
AMK01_RS14275	PWY-7308	acrylonitrile degradation I
AMK01_RS14280	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AMK01_RS14280	PWY-581	indole-3-acetate biosynthesis II
AMK01_RS14280	PWY-7308	acrylonitrile degradation I
AMK01_RS14305	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS14305	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS14305	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS14305	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMK01_RS14305	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMK01_RS14305	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMK01_RS14305	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS14310	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS14310	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS14310	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS14310	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMK01_RS14310	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMK01_RS14310	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMK01_RS14310	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS14335	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMK01_RS14360	PWY-3841	folate transformations II
AMK01_RS14360	PWY-6614	tetrahydrofolate biosynthesis
AMK01_RS14365	PWY-3841	folate transformations II
AMK01_RS14365	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS14365	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS14365	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK01_RS14365	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK01_RS14365	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK01_RS14420	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AMK01_RS14575	PWY-2201	folate transformations I
AMK01_RS14575	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS14595	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14595	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14610	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14610	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14615	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK01_RS14615	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK01_RS14615	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK01_RS14615	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK01_RS14625	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14625	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14630	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK01_RS14630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK01_RS14630	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK01_RS14635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14655	PWY-2201	folate transformations I
AMK01_RS14695	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS14695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK01_RS14695	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS14695	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK01_RS14740	PWY-2201	folate transformations I
AMK01_RS14740	PWY-3841	folate transformations II
AMK01_RS14815	PWY-381	nitrate reduction II (assimilatory)
AMK01_RS14815	PWY-5675	nitrate reduction V (assimilatory)
AMK01_RS14815	PWY-6549	L-glutamine biosynthesis III
AMK01_RS14815	PWY-6963	ammonia assimilation cycle I
AMK01_RS14815	PWY-6964	ammonia assimilation cycle II
AMK01_RS14900	PWY-2201	folate transformations I
AMK01_RS14900	PWY-3841	folate transformations II
AMK01_RS14920	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK01_RS14920	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK01_RS14980	PWY-6157	autoinducer AI-1 biosynthesis
AMK01_RS15095	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS15100	PWY-5515	L-arabinose degradation II
AMK01_RS15100	PWY-5525	D-glucuronate degradation I
AMK01_RS15100	PWY-7378	aminopropanol phosphate biosynthesis II
AMK01_RS15130	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS15130	PWY-5686	UMP biosynthesis
AMK01_RS15130	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS15170	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS15170	PWY-5686	UMP biosynthesis
AMK01_RS15170	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS15375	PWY-3341	L-proline biosynthesis III
AMK01_RS15375	PWY-4981	L-proline biosynthesis II (from arginine)
AMK01_RS15375	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMK01_RS15440	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AMK01_RS15475	PWY-6605	adenine and adenosine salvage II
AMK01_RS15475	PWY-6610	adenine and adenosine salvage IV
AMK01_RS15490	PWY-3781	aerobic respiration I (cytochrome c)
AMK01_RS15490	PWY-6692	Fe(II) oxidation
AMK01_RS15490	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AMK01_RS15490	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK01_RS15515	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMK01_RS15530	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMK01_RS15530	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMK01_RS15590	PWY-4061	glutathione-mediated detoxification I
AMK01_RS15590	PWY-6842	glutathione-mediated detoxification II
AMK01_RS15590	PWY-7112	4-hydroxy-2-nonenal detoxification
AMK01_RS15590	PWY-7533	gliotoxin biosynthesis
AMK01_RS15620	PWY-6871	3-methylbutanol biosynthesis
AMK01_RS15640	PWY-6700	queuosine biosynthesis
AMK01_RS15660	PWY-5958	acridone alkaloid biosynthesis
AMK01_RS15660	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK01_RS15660	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK01_RS15675	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMK01_RS15675	PWY-2161	folate polyglutamylation
AMK01_RS15675	PWY-2201	folate transformations I
AMK01_RS15675	PWY-3841	folate transformations II
AMK01_RS15705	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK01_RS15755	PWY-6610	adenine and adenosine salvage IV
AMK01_RS15805	PWY-381	nitrate reduction II (assimilatory)
AMK01_RS15805	PWY-5675	nitrate reduction V (assimilatory)
AMK01_RS15805	PWY-6549	L-glutamine biosynthesis III
AMK01_RS15805	PWY-6963	ammonia assimilation cycle I
AMK01_RS15805	PWY-6964	ammonia assimilation cycle II
AMK01_RS15885	PWY-4261	glycerol degradation I
AMK01_RS15895	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS15895	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK01_RS15895	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AMK01_RS15895	PWY-6596	adenosine nucleotides degradation I
AMK01_RS15895	PWY-6606	guanosine nucleotides degradation II
AMK01_RS15895	PWY-6607	guanosine nucleotides degradation I
AMK01_RS15895	PWY-6608	guanosine nucleotides degradation III
AMK01_RS15895	PWY-6999	theophylline degradation
AMK01_RS15900	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS15900	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK01_RS15900	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AMK01_RS15900	PWY-6596	adenosine nucleotides degradation I
AMK01_RS15900	PWY-6606	guanosine nucleotides degradation II
AMK01_RS15900	PWY-6607	guanosine nucleotides degradation I
AMK01_RS15900	PWY-6608	guanosine nucleotides degradation III
AMK01_RS15900	PWY-6999	theophylline degradation
AMK01_RS15930	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS15930	PWY-6606	guanosine nucleotides degradation II
AMK01_RS15930	PWY-6608	guanosine nucleotides degradation III
AMK01_RS15930	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMK01_RS15980	PWY-5691	urate degradation to allantoin I
AMK01_RS15980	PWY-7394	urate degradation to allantoin II
AMK01_RS15985	PWY-5694	allantoin degradation to glyoxylate I
AMK01_RS15985	PWY-5705	allantoin degradation to glyoxylate III
AMK01_RS15995	PWY-5691	urate degradation to allantoin I
AMK01_RS15995	PWY-7394	urate degradation to allantoin II
AMK01_RS16005	PWY-5532	adenosine nucleotides degradation IV
AMK01_RS16095	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS16095	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS16095	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS16095	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS16575	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
AMK01_RS16640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK01_RS16640	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK01_RS16640	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK01_RS16640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK01_RS16700	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AMK01_RS16730	PWY-6749	CMP-legionaminate biosynthesis I
AMK01_RS16735	PWY-5659	GDP-mannose biosynthesis
AMK01_RS16735	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMK01_RS16885	PWY-2661	trehalose biosynthesis V
AMK01_RS16885	PWY-6902	chitin degradation II
AMK01_RS16905	PWY-5350	thiosulfate disproportionation III (rhodanese)
AMK01_RS16990	PWY-5704	urea degradation II
AMK01_RS17005	PWY-5704	urea degradation II
AMK01_RS17015	PWY-5704	urea degradation II
AMK01_RS17195	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS17210	PWY-5101	L-isoleucine biosynthesis II
AMK01_RS17210	PWY-5103	L-isoleucine biosynthesis III
AMK01_RS17210	PWY-5104	L-isoleucine biosynthesis IV
AMK01_RS17210	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK01_RS17530	PWY-1881	formate oxidation to CO<sub>2</sub>
AMK01_RS17530	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS17530	PWY-6696	oxalate degradation III
AMK01_RS17605	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK01_RS17605	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK01_RS17605	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK01_RS17660	PWY-6610	adenine and adenosine salvage IV
AMK01_RS17760	PWY-5482	pyruvate fermentation to acetate II
AMK01_RS17760	PWY-5485	pyruvate fermentation to acetate IV
AMK01_RS17760	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS17845	PWY-6749	CMP-legionaminate biosynthesis I
AMK01_RS18050	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK01_RS18050	PWY-5723	Rubisco shunt
AMK01_RS18050	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK01_RS18050	PWY-6892	thiazole biosynthesis I (E. coli)
AMK01_RS18050	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS18050	PWY-7560	methylerythritol phosphate pathway II
AMK01_RS18055	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS18055	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS18055	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS18055	PWY-7003	glycerol degradation to butanol
AMK01_RS18070	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS18070	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS18070	PWY-6886	1-butanol autotrophic biosynthesis
AMK01_RS18070	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS18070	PWY-7003	glycerol degradation to butanol
AMK01_RS18075	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS18075	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK01_RS18075	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS18075	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS18075	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK01_RS18140	PWY-2301	<i>myo</i>-inositol biosynthesis
AMK01_RS18140	PWY-4702	phytate degradation I
AMK01_RS18140	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AMK01_RS18200	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMK01_RS18200	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMK01_RS18200	PWY-6897	thiamin salvage II
AMK01_RS18200	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMK01_RS18200	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMK01_RS18200	PWY-7356	thiamin salvage IV (yeast)
AMK01_RS18200	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMK01_RS18225	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK01_RS18225	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK01_RS18250	PWY-4041	&gamma;-glutamyl cycle
AMK01_RS18250	PWY-5826	hypoglycin biosynthesis
AMK01_RS18280	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS18280	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK01_RS18280	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS18280	PWY-5723	Rubisco shunt
AMK01_RS18280	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS18280	PWY-6886	1-butanol autotrophic biosynthesis
AMK01_RS18280	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS18280	PWY-7003	glycerol degradation to butanol
AMK01_RS18280	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK01_RS18280	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK01_RS18320	PWY-5958	acridone alkaloid biosynthesis
AMK01_RS18320	PWY-6543	4-aminobenzoate biosynthesis
AMK01_RS18320	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK01_RS18320	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK01_RS18370	PWY-3801	sucrose degradation II (sucrose synthase)
AMK01_RS18370	PWY-6527	stachyose degradation
AMK01_RS18370	PWY-7238	sucrose biosynthesis II
AMK01_RS18370	PWY-7343	UDP-glucose biosynthesis
AMK01_RS18535	PWY-5941	glycogen degradation II (eukaryotic)
AMK01_RS18535	PWY-6731	starch degradation III
AMK01_RS18535	PWY-6737	starch degradation V
AMK01_RS18535	PWY-7238	sucrose biosynthesis II
AMK01_RS18540	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK01_RS18540	PWY-622	starch biosynthesis
AMK01_RS18545	PWY-622	starch biosynthesis
AMK01_RS18550	PWY-622	starch biosynthesis
AMK01_RS18555	PWY-6749	CMP-legionaminate biosynthesis I
AMK01_RS18575	PWY-3661	glycine betaine degradation I
AMK01_RS18575	PWY-4722	creatinine degradation II
AMK01_RS18580	PWY-3661	glycine betaine degradation I
AMK01_RS18580	PWY-4722	creatinine degradation II
AMK01_RS18585	PWY-3661	glycine betaine degradation I
AMK01_RS18585	PWY-4722	creatinine degradation II
AMK01_RS18590	PWY-3661	glycine betaine degradation I
AMK01_RS18590	PWY-4722	creatinine degradation II
AMK01_RS18650	PWY-3781	aerobic respiration I (cytochrome c)
AMK01_RS18650	PWY-4521	arsenite oxidation I (respiratory)
AMK01_RS18650	PWY-6692	Fe(II) oxidation
AMK01_RS18650	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK01_RS18700	PWY-2201	folate transformations I
AMK01_RS18700	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS18700	PWY-6167	flavin biosynthesis II (archaea)
AMK01_RS18720	PWY-6936	seleno-amino acid biosynthesis
AMK01_RS18720	PWY-7274	D-cycloserine biosynthesis
AMK01_RS18775	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK01_RS18775	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMK01_RS18775	PWY-7242	D-fructuronate degradation
AMK01_RS18775	PWY-7310	D-glucosaminate degradation
AMK01_RS18775	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMK01_RS18800	PWY-3121	linamarin degradation
AMK01_RS18800	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AMK01_RS18800	PWY-6002	lotaustralin degradation
AMK01_RS18800	PWY-6788	cellulose degradation II (fungi)
AMK01_RS18800	PWY-7089	taxiphyllin bioactivation
AMK01_RS18800	PWY-7091	linustatin bioactivation
AMK01_RS18800	PWY-7092	neolinustatin bioactivation
AMK01_RS18845	PWY-4261	glycerol degradation I
AMK01_RS18880	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK01_RS18920	PWY-2	putrescine degradation IV
AMK01_RS18920	PWY-3	putrescine degradation V
AMK01_RS18960	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK01_RS18960	PWY-5723	Rubisco shunt
AMK01_RS18995	PWY-4261	glycerol degradation I
AMK01_RS19005	PWY-6531	mannitol cycle
AMK01_RS19045	PWY-6902	chitin degradation II
AMK01_RS19100	PWY-1042	glycolysis IV (plant cytosol)
AMK01_RS19100	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK01_RS19100	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK01_RS19100	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK01_RS19100	PWY-5723	Rubisco shunt
AMK01_RS19100	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS19100	PWY-6886	1-butanol autotrophic biosynthesis
AMK01_RS19100	PWY-6901	superpathway of glucose and xylose degradation
AMK01_RS19100	PWY-7003	glycerol degradation to butanol
AMK01_RS19100	PWY-7124	ethylene biosynthesis V (engineered)
AMK01_RS19100	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK01_RS19140	PWY-6807	xyloglucan degradation II (exoglucanase)
AMK01_RS19170	PWY-6703	preQ<sub>0</sub> biosynthesis
AMK01_RS19180	PWY-6703	preQ<sub>0</sub> biosynthesis
AMK01_RS19190	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK01_RS19190	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS19190	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK01_RS19190	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK01_RS19190	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS19190	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS19190	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS19190	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK01_RS19195	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK01_RS19195	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS19195	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK01_RS19195	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK01_RS19195	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS19195	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK01_RS19195	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK01_RS19195	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK01_RS19320	PWY-2941	L-lysine biosynthesis II
AMK01_RS19320	PWY-2942	L-lysine biosynthesis III
AMK01_RS19320	PWY-5097	L-lysine biosynthesis VI
AMK01_RS19320	PWY-6559	spermidine biosynthesis II
AMK01_RS19320	PWY-6562	norspermidine biosynthesis
AMK01_RS19320	PWY-7153	grixazone biosynthesis
AMK01_RS19325	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMK01_RS19325	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMK01_RS19325	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMK01_RS19325	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMK01_RS19325	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AMK01_RS19325	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AMK01_RS19325	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AMK01_RS19325	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMK01_RS19325	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMK01_RS19325	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AMK01_RS19365	PWY-6502	oxidized GTP and dGTP detoxification
AMK01_RS19375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS19485	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK01_RS19485	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK01_RS19485	PWY-6268	adenosylcobalamin salvage from cobalamin
AMK01_RS19485	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK01_RS19505	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMK01_RS19505	PWY-5109	2-methylbutanoate biosynthesis
AMK01_RS19505	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMK01_RS19505	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMK01_RS19505	PWY-5177	glutaryl-CoA degradation
AMK01_RS19505	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK01_RS19505	PWY-6435	4-hydroxybenzoate biosynthesis V
AMK01_RS19505	PWY-6583	pyruvate fermentation to butanol I
AMK01_RS19505	PWY-6863	pyruvate fermentation to hexanol
AMK01_RS19505	PWY-6883	pyruvate fermentation to butanol II
AMK01_RS19505	PWY-6944	androstenedione degradation
AMK01_RS19505	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMK01_RS19505	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMK01_RS19505	PWY-7007	methyl ketone biosynthesis
AMK01_RS19505	PWY-7046	4-coumarate degradation (anaerobic)
AMK01_RS19505	PWY-7094	fatty acid salvage
AMK01_RS19505	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMK01_RS19505	PWY-735	jasmonic acid biosynthesis
AMK01_RS19505	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMK01_RS19505	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMK01_RS19505	PWY-7726	AMK01_RS19505
AMK01_RS19515	PWY-4983	L-citrulline-nitric oxide cycle
AMK01_RS19515	PWY-4984	urea cycle
AMK01_RS19515	PWY-5	canavanine biosynthesis
AMK01_RS19515	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS19515	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS19525	PWY-2941	L-lysine biosynthesis II
AMK01_RS19525	PWY-2942	L-lysine biosynthesis III
AMK01_RS19525	PWY-5097	L-lysine biosynthesis VI
AMK01_RS19540	PWY-6599	guanine and guanosine salvage II
AMK01_RS19540	PWY-6609	adenine and adenosine salvage III
AMK01_RS19540	PWY-6610	adenine and adenosine salvage IV
AMK01_RS19540	PWY-6620	guanine and guanosine salvage
AMK01_RS19585	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AMK01_RS19600	PWY-5386	methylglyoxal degradation I
AMK01_RS19640	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AMK01_RS19645	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
AMK01_RS19665	PWY-6164	3-dehydroquinate biosynthesis I
AMK01_RS19670	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK01_RS19680	PWY-4381	fatty acid biosynthesis initiation I
AMK01_RS19680	PWY-5743	3-hydroxypropanoate cycle
AMK01_RS19680	PWY-5744	glyoxylate assimilation
AMK01_RS19680	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK01_RS19680	PWY-6679	jadomycin biosynthesis
AMK01_RS19680	PWY-6722	candicidin biosynthesis
AMK01_RS19680	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK01_RS19740	PWY-7294	xylose degradation IV
AMK01_RS19740	PWY-7295	L-arabinose degradation IV
AMK01_RS19740	PWY-7560	methylerythritol phosphate pathway II
AMK01_RS19775	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK01_RS19775	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
AMK01_RS19800	PWY-31	canavanine degradation
AMK01_RS19800	PWY-4984	urea cycle
AMK01_RS19800	PWY-6305	putrescine biosynthesis IV
AMK01_RS19800	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK01_RS19805	PWY-3341	L-proline biosynthesis III
AMK01_RS19805	PWY-4981	L-proline biosynthesis II (from arginine)
AMK01_RS19805	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMK01_RS19805	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK01_RS19830	PWY-1881	formate oxidation to CO<sub>2</sub>
AMK01_RS19830	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK01_RS19830	PWY-6696	oxalate degradation III
AMK01_RS19900	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS19910	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS19960	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMK01_RS19960	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK01_RS19985	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK01_RS19995	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK01_RS20000	PWY-5392	reductive TCA cycle II
AMK01_RS20000	PWY-5537	pyruvate fermentation to acetate V
AMK01_RS20000	PWY-5538	pyruvate fermentation to acetate VI
AMK01_RS20000	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS20000	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK01_RS20000	PWY-6728	methylaspartate cycle
AMK01_RS20000	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS20000	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK01_RS20005	PWY-5392	reductive TCA cycle II
AMK01_RS20005	PWY-5537	pyruvate fermentation to acetate V
AMK01_RS20005	PWY-5538	pyruvate fermentation to acetate VI
AMK01_RS20005	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS20005	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK01_RS20005	PWY-6728	methylaspartate cycle
AMK01_RS20005	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS20005	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMK01_RS20010	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK01_RS20010	PWY-5392	reductive TCA cycle II
AMK01_RS20010	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK01_RS20010	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS20010	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK01_RS20010	PWY-6728	methylaspartate cycle
AMK01_RS20010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS20010	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK01_RS20010	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK01_RS20030	PWY-3781	aerobic respiration I (cytochrome c)
AMK01_RS20030	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMK01_RS20030	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK01_RS20030	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS20030	PWY-6728	methylaspartate cycle
AMK01_RS20030	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS20030	PWY-7254	TCA cycle VII (acetate-producers)
AMK01_RS20030	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK01_RS20035	PWY-3781	aerobic respiration I (cytochrome c)
AMK01_RS20035	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMK01_RS20035	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK01_RS20035	PWY-5690	TCA cycle II (plants and fungi)
AMK01_RS20035	PWY-6728	methylaspartate cycle
AMK01_RS20035	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS20035	PWY-7254	TCA cycle VII (acetate-producers)
AMK01_RS20035	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMK01_RS20070	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK01_RS20070	PWY-5981	CDP-diacylglycerol biosynthesis III
AMK01_RS20075	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMK01_RS20075	PWY-5368	dimorphecolate biosynthesis
AMK01_RS20075	PWY-5995	linoleate biosynthesis I (plants)
AMK01_RS20075	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMK01_RS20075	PWY-6803	phosphatidylcholine acyl editing
AMK01_RS20075	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMK01_RS20075	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMK01_RS20075	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMK01_RS20075	PWY-7470	phosphatidylcholine biosynthesis VII
AMK01_RS20075	PWY-7618	ricinoleate biosynthesis
AMK01_RS20080	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK01_RS20080	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK01_RS20085	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK01_RS20085	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK01_RS20165	PWY-4983	L-citrulline-nitric oxide cycle
AMK01_RS20165	PWY-4984	urea cycle
AMK01_RS20165	PWY-5	canavanine biosynthesis
AMK01_RS20165	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS20165	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS20195	PWY-2201	folate transformations I
AMK01_RS20215	PWY-7158	L-phenylalanine degradation V
AMK01_RS20315	PWY-2941	L-lysine biosynthesis II
AMK01_RS20315	PWY-5097	L-lysine biosynthesis VI
AMK01_RS20330	PWY-3461	L-tyrosine biosynthesis II
AMK01_RS20330	PWY-3462	L-phenylalanine biosynthesis II
AMK01_RS20330	PWY-6120	L-tyrosine biosynthesis III
AMK01_RS20330	PWY-6627	salinosporamide A biosynthesis
AMK01_RS20330	PWY-7626	bacilysin biosynthesis
AMK01_RS20345	PWY-6829	tRNA methylation (yeast)
AMK01_RS20345	PWY-7285	methylwyosine biosynthesis
AMK01_RS20345	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AMK01_RS20460	PWY-3821	galactose degradation III
AMK01_RS20460	PWY-6317	galactose degradation I (Leloir pathway)
AMK01_RS20460	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMK01_RS20460	PWY-6527	stachyose degradation
AMK01_RS20460	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMK01_RS20460	PWY-7344	UDP-D-galactose biosynthesis
AMK01_RS20490	PWY-7533	gliotoxin biosynthesis
AMK01_RS20550	PWY-5750	itaconate biosynthesis
AMK01_RS20550	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS20550	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AMK01_RS20635	PWY-5676	acetyl-CoA fermentation to butanoate II
AMK01_RS20635	PWY-5741	ethylmalonyl-CoA pathway
AMK01_RS20635	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMK01_RS20690	PWY-6898	thiamin salvage III
AMK01_RS20690	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMK01_RS20690	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMK01_RS20690	PWY-7356	thiamin salvage IV (yeast)
AMK01_RS20710	PWY-6317	galactose degradation I (Leloir pathway)
AMK01_RS20725	PWY-6906	chitin derivatives degradation
AMK01_RS20725	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AMK01_RS20725	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AMK01_RS20900	PWY-3341	L-proline biosynthesis III
AMK01_RS20900	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK01_RS20905	PWY-3341	L-proline biosynthesis III
AMK01_RS20905	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK01_RS20910	PWY-5381	pyridine nucleotide cycling (plants)
AMK01_RS20910	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMK01_RS20940	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS21025	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMK01_RS21055	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK01_RS21055	PWY-5491	diethylphosphate degradation
AMK01_RS21065	PWY-2941	L-lysine biosynthesis II
AMK01_RS21065	PWY-2942	L-lysine biosynthesis III
AMK01_RS21065	PWY-5097	L-lysine biosynthesis VI
AMK01_RS21065	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK01_RS21065	PWY-6559	spermidine biosynthesis II
AMK01_RS21065	PWY-6562	norspermidine biosynthesis
AMK01_RS21065	PWY-7153	grixazone biosynthesis
AMK01_RS21065	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK01_RS21080	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK01_RS21080	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK01_RS21080	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK01_RS21080	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK01_RS21085	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK01_RS21085	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK01_RS21095	PWY-5022	4-aminobutanoate degradation V
AMK01_RS21095	PWY-6728	methylaspartate cycle
AMK01_RS21095	PWY-7126	ethylene biosynthesis IV
AMK01_RS21105	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK01_RS21105	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK01_RS21105	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK01_RS21110	PWY-7651	heparan sulfate degradation
AMK01_RS21115	PWY-6825	phosphatidylcholine biosynthesis V
AMK01_RS21130	PWY-6672	<i>cis</i>-genanyl-CoA degradation
AMK01_RS21130	PWY-7118	chitin degradation to ethanol
AMK01_RS21145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK01_RS21190	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK01_RS21855	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK01_RS21855	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK01_RS21855	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK01_RS21855	PWY-6113	superpathway of mycolate biosynthesis
AMK01_RS21855	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK01_RS21855	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK01_RS21855	PWY-7663	gondoate biosynthesis (anaerobic)
AMK01_RS21855	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK01_RS21855	PWYG-321	mycolate biosynthesis
AMK01_RS22545	PWY-7723	AMK01_RS22545
AMK01_RS22940	PWY-6728	methylaspartate cycle
AMK01_RS22940	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS22940	PWY-7118	chitin degradation to ethanol
AMK01_RS22940	PWY-7294	xylose degradation IV
AMK01_RS22940	PWY-7295	L-arabinose degradation IV
AMK01_RS24365	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMK01_RS24975	PWY-5129	sphingolipid biosynthesis (plants)
AMK01_RS25115	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
AMK01_RS25115	PWY-7248	pectin degradation III
AMK01_RS25540	PWY-5532	adenosine nucleotides degradation IV
AMK01_RS25595	PWY-2941	L-lysine biosynthesis II
AMK01_RS25595	PWY-2942	L-lysine biosynthesis III
AMK01_RS25595	PWY-5097	L-lysine biosynthesis VI
AMK01_RS26275	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMK01_RS27290	PWY-6728	methylaspartate cycle
AMK01_RS27290	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMK01_RS27290	PWY-7118	chitin degradation to ethanol
AMK01_RS27290	PWY-7294	xylose degradation IV
AMK01_RS27290	PWY-7295	L-arabinose degradation IV
AMK01_RS30275	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
